Rmu_sc0035719.1_g000001

Ribosomal protein L14p/L23e

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035719.1
Physical Location & Seq
Forward (+)
229 .. 594
366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0035719.1_g000001.1.cds

Sequence Viewer

Length: 366 bp
atggcctccacagatgctgtcacagcaagttttgctgcttctcttgccctcgctacaagtggtagcacccgggatctgagcaagattggtggtggtccggtgtgtaagtcatctcaatcttttctacttggcgaacctttgacccacaagtcggtggaccccaaagcgttcaagactcacttccattgtacctggatggtggataagcaatttagggttcaggaaaaggctggagatgtgttcctgttctcctttgaatcggattgtgatcgtaacaagatatttcgaataggggtttggtcctttgatcgagccccagtttgttttgaagaatatgatggcataaagcctctgcatgaagcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.35

Weight (kDa)

6.4

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 148
AclWI GGATC 1 cut(s) 81
AfaI GTAC 1 cut(s) 190
AfiI CCNNNNNNNGG 1 cut(s) 151
AgsI TTSAA 3 cut(s) 172, 257, 329
AjnI CCWGG 1 cut(s) 191
AjuI GAANNNNNNNTTGG 2 cut(s) 280, 312
AluBI AGCT 1 cut(s) 362
AluI AGCT 1 cut(s) 362
AlwI GGATC 1 cut(s) 81
AlwNI CAGNNNCTG 1 cut(s) 17
Ama87I CYCGRG 1 cut(s) 69
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 35
AspS9I GGNCC 3 cut(s) 95, 157, 300
AsuC2I CCSGG 2 cut(s) 70, 71
AsuII TTCGAA 1 cut(s) 286
AvaI CYCGRG 1 cut(s) 69
AvaII GGWCC 3 cut(s) 95, 157, 300
BanII GRGCYC 1 cut(s) 316
BbvI GCAGC 1 cut(s) 22
BccI CCATC 2 cut(s) 190, 332
BciT130I CCWGG 1 cut(s) 193
BcnI CCSGG 2 cut(s) 70, 71
BisI GCNGC 1 cut(s) 36
BlsI GCNGC 1 cut(s) 37
Bme1390I CCNGG 3 cut(s) 70, 71, 193
Bme18I GGWCC 3 cut(s) 95, 157, 300
BmeT110I CYCGRG 1 cut(s) 69
BmgT120I GGNCC 3 cut(s) 95, 157, 300
BmiI GGNNCC 1 cut(s) 159
BmrFI CCNGG 3 cut(s) 70, 71, 193
BmrI ACTGGG 1 cut(s) 311
BmsI GCATC 1 cut(s) 4
BmuI ACTGGG 1 cut(s) 311
BpmI CTGGAG 1 cut(s) 252
Bpu14I TTCGAA 1 cut(s) 286
BpuMI CCSGG 2 cut(s) 70, 71
BsaBI GATNNNNATC 1 cut(s) 267
BsaJI CCNNGG 1 cut(s) 69
BsaWI WCCGGW 1 cut(s) 97
Bsc4I CCNNNNNNNGG 1 cut(s) 151
Bse1I ACTGG 1 cut(s) 317
Bse8I GATNNNNATC 1 cut(s) 267
BseBI CCWGG 1 cut(s) 193
BseDI CCNNGG 1 cut(s) 69
BseGI GGATG 1 cut(s) 201
BseJI GATNNNNATC 1 cut(s) 267
BseLI CCNNNNNNNGG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 68
BseNI ACTGG 1 cut(s) 317
BseXI GCAGC 1 cut(s) 22
BshFI GGCC 1 cut(s) 5
BsiHKCI CYCGRG 1 cut(s) 69
BsiSI CCGG 2 cut(s) 70, 98
BslI CCNNNNNNNGG 1 cut(s) 151
BsnI GGCC 1 cut(s) 5
BsoBI CYCGRG 1 cut(s) 69
Bsp119I TTCGAA 1 cut(s) 286
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 3 cut(s) 73, 268, 307
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 69
BspLI GGNNCC 1 cut(s) 159
BspPI GGATC 1 cut(s) 81
BspT104I TTCGAA 1 cut(s) 286
BsrI ACTGG 1 cut(s) 317
BssECI CCNNGG 1 cut(s) 69
BssMI GATC 3 cut(s) 73, 268, 307
Bst2UI CCWGG 1 cut(s) 193
BstAPI GCANNNNNTGC 1 cut(s) 32
BstBI TTCGAA 1 cut(s) 286
BstDEI CTNAG 1 cut(s) 77
BstF5I GGATG 1 cut(s) 201
BstKTI GATC 3 cut(s) 76, 271, 310
BstMBI GATC 3 cut(s) 73, 268, 307
BstMWI GCNNNNNNNGC 3 cut(s) 23, 32, 44
BstNI CCWGG 1 cut(s) 193
BstSCI CCNGG 3 cut(s) 68, 69, 191
BstV1I GCAGC 1 cut(s) 22
BstX2I RGATCY 1 cut(s) 73
BstYI RGATCY 1 cut(s) 73
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 1 cut(s) 201
CaiI CAGNNNCTG 1 cut(s) 17
Cfr13I GGNCC 3 cut(s) 95, 157, 300
Cfr9I CCCGGG 1 cut(s) 69
Csp6I GTAC 1 cut(s) 189
CspCI CAANNNNNGTGG 2 cut(s) 70, 105
CviAII CATG 1 cut(s) 356
CviJI RGCY 5 cut(s) 5, 230, 314, 349, 362
CviKI_1 RGCY 5 cut(s) 5, 230, 314, 349, 362
CviQI GTAC 1 cut(s) 189
DdeI CTNAG 1 cut(s) 77
DpnI GATC 3 cut(s) 75, 270, 309
DpnII GATC 3 cut(s) 73, 268, 307
DrdI GACNNNNNNGTC 1 cut(s) 148
DseDI GACNNNNNNGTC 1 cut(s) 148
Eco24I GRGCYC 1 cut(s) 316
Eco47I GGWCC 3 cut(s) 95, 157, 300
Eco88I CYCGRG 1 cut(s) 69
EcoRII CCWGG 1 cut(s) 191
EcoT38I GRGCYC 1 cut(s) 316
FaeI CATG 1 cut(s) 359
FaiI YATR 3 cut(s) 336, 344, 357
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FatI CATG 1 cut(s) 355
Fnu4HI GCNGC 1 cut(s) 36
FokI GGATG 1 cut(s) 208
FriOI GRGCYC 1 cut(s) 316
Fsp4HI GCNGC 1 cut(s) 36
GluI GCNGC 1 cut(s) 36
GsuI CTGGAG 1 cut(s) 252
HaeIII GGCC 1 cut(s) 5
HapII CCGG 2 cut(s) 70, 98
Hin1II CATG 1 cut(s) 359
HindIII AAGCTT 1 cut(s) 360
HinfI GANTC 2 cut(s) 175, 257
HpaII CCGG 2 cut(s) 70, 98
Hpy166II GTNNAC 1 cut(s) 157
Hpy188I TCNGA 2 cut(s) 78, 262
Hpy188III TCNNGA 2 cut(s) 172, 221
Hpy8I GTNNAC 1 cut(s) 157
HpyCH4V TGCA 1 cut(s) 355
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 32, 44
HpyF3I CTNAG 1 cut(s) 77
Hsp92II CATG 1 cut(s) 359
Kzo9I GATC 3 cut(s) 73, 268, 307
LpnPI CCDG 8 cut(s) 83, 111, 178, 205, 206, 216, 257, 330
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 1 cut(s) 4
MaeIII GTNAC 2 cut(s) 19, 272
MalI GATC 3 cut(s) 75, 270, 309
MboI GATC 3 cut(s) 73, 268, 307
MboII GAAGA 1 cut(s) 341
MflI RGATCY 1 cut(s) 73
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 1 cut(s) 209
MlyI GAGTC 1 cut(s) 169
MnlI CCTC 3 cut(s) 16, 59, 360
MseI TTAA 1 cut(s) 364
MspI CCGG 2 cut(s) 70, 98
MspR9I CCNGG 3 cut(s) 70, 71, 193
MvaI CCWGG 1 cut(s) 193
MwoI GCNNNNNNNGC 3 cut(s) 23, 32, 44
NciI CCSGG 2 cut(s) 70, 71
NdeII GATC 3 cut(s) 73, 268, 307
NlaIII CATG 1 cut(s) 359
NlaIV GGNNCC 1 cut(s) 159
NmuCI GTSAC 1 cut(s) 19
NspV TTCGAA 1 cut(s) 286
PfeI GAWTC 1 cut(s) 257
PkrI GCNGC 1 cut(s) 37
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
Psp6I CCWGG 1 cut(s) 191
PspGI CCWGG 1 cut(s) 191
PspN4I GGNNCC 1 cut(s) 159
PspPI GGNCC 3 cut(s) 95, 157, 300
PstNI CAGNNNCTG 1 cut(s) 17
PsuI RGATCY 1 cut(s) 73
RsaI GTAC 1 cut(s) 190
RsaNI GTAC 1 cut(s) 189
SaqAI TTAA 1 cut(s) 364
SatI GCNGC 1 cut(s) 36
Sau3AI GATC 3 cut(s) 73, 268, 307
Sau96I GGNCC 3 cut(s) 95, 157, 300
SchI GAGTC 1 cut(s) 169
ScrFI CCNGG 3 cut(s) 70, 71, 193
SduI GDGCHC 1 cut(s) 316
SetI ASST 3 cut(s) 139, 194, 364
SfaNI GCATC 1 cut(s) 4
SfuI TTCGAA 1 cut(s) 286
SinI GGWCC 3 cut(s) 95, 157, 300
SmaI CCCGGG 1 cut(s) 71
Sse9I AATT 1 cut(s) 209
StyD4I CCNGG 3 cut(s) 68, 69, 191
TaqI TCGA 2 cut(s) 286, 310
TasI AATT 1 cut(s) 209
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 1 cut(s) 364
Tru9I TTAA 1 cut(s) 364
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 1 cut(s) 35
Tsp45I GTSAC 1 cut(s) 19
TspMI CCCGGG 1 cut(s) 69
VpaK11BI GGWCC 3 cut(s) 95, 157, 300
XmaI CCCGGG 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.