Rmu_sc0000245.1_g000011

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000245.1
OG0000169
Physical Location & Seq
Forward (+)
36001 .. 37299
1299 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000245.1_g000011.1.cds

Sequence Viewer

Length: 1200 bp
atggcttcaattgacgctgtcactgctagctttgccgcctctctggctctcgttgagggaggtaacgccccggatctggggaagattggaggaggtcctgttcgtcgatcttctcagattcaagagaagaccgacaatcagtttctcttctcctttgattcggtcagagatcggaacaaggtactcagaggtggtgtgtggtgttttgacagagcccccatctgtctggaggagtatgatggtattcttcccatcgctggagttcctatgaagcatgttcggatgtcagttagggtttctgacatccctcctctctacgaggaacctgacaatttcatccaaattggaaacttgctgggtggttatctggactacgataagagagagtttcgaaaaggtattgttcgaattatcttctcccatgacatctctaaaccagttattcttgagagaagggttttcttggcccctggtattgagcctattttgcagttccagtttgaacatcttaaagggagatgtcctcagtgtggattgattacacattctggggctaaatgtgaggagccaaatacggttgtttctgctcctagggttttgaagtttggtggtggcccctctacctctggtggcgccttctctttctctgctcatactactcgagatttacctaagccatcttcttcactgttgaaaaagaagaagccagttgttcgtcagctagagcgatcatcttctgaaattgcttctcaggataccatgcacatcacggcggagatggaaggtatggctcaagaggtttcggaggcgaacaaggttagtgggttgtcctcggtggaaccttctgacccaagttctcaagatctagctattactcctgccatgactggtcagaagcaaactttgatttacaagaaaagaggtcgagaagaggtatttgttccttcccctaagaaattcaaaactattttgggtggtaagcttctcactctccatgcggaagctcttggtttgactgaagttgaggatgatgttgccctggtgacattgaagaagaggttggaaagaccgctgggaagcaagaacgagggtcccaggtctcaaacaaaggttggtttgacccctttgcgtcttacctatccttctactactacttctcaggaggttggcccaaaagctaagggcaaggggaaactctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

399

Amino Acids

43.45

Weight (kDa)

9.26

Isoelectric Point (pI)

51.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 632
AciI CCGC 4 cut(s) 36, 773, 998, 1070
AclWI GGATC 1 cut(s) 81
AcsI RAATTY 1 cut(s) 956
AcuI CTGAAG 1 cut(s) 1038
AcyI GRCGYC 1 cut(s) 633
AfaI GTAC 1 cut(s) 183
AfiI CCNNNNNNNGG 4 cut(s) 76, 77, 257, 530
AgsI TTSAA 7 cut(s) 9, 122, 503, 601, 694, 961, 1051
AjnI CCWGG 3 cut(s) 469, 1038, 1094
AjuI GAANNNNNNNTTGG 2 cut(s) 1043, 1075
AloI GAACNNNNNNTCC 2 cut(s) 84, 116
AluBI AGCT 6 cut(s) 30, 721, 869, 982, 1004, 1178
AluI AGCT 6 cut(s) 30, 721, 869, 982, 1004, 1178
Alw26I GTCTC 1 cut(s) 1104
AlwI GGATC 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 660
AoxI GGCC 3 cut(s) 465, 613, 1168
ApoI RAATTY 1 cut(s) 956
AspA2I CCTAGG 1 cut(s) 590
AspLEI GCGC 1 cut(s) 635
AspS9I GGNCC 5 cut(s) 95, 466, 614, 1091, 1169
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 1 cut(s) 1054
AsuII TTCGAA 2 cut(s) 391, 406
AsuNHI GCTAGC 1 cut(s) 26
AvaI CYCGRG 1 cut(s) 660
AvaII GGWCC 2 cut(s) 95, 1091
AvrII CCTAGG 1 cut(s) 590
BanI GGYRCC 1 cut(s) 632
BanII GRGCYC 1 cut(s) 217
BbsI GAAGAC 1 cut(s) 134
BccI CCATC 5 cut(s) 227, 233, 260, 685, 772
BceAI ACGGC 1 cut(s) 786
BciT130I CCWGG 3 cut(s) 471, 1040, 1096
BciVI GTATCC 1 cut(s) 748
BcnI CCSGG 1 cut(s) 71
BcoDI GTCTC 1 cut(s) 1104
BfaI CTAG 5 cut(s) 27, 591, 722, 866, 1198
BfoI RGCGCY 1 cut(s) 636
BfuI GTATCC 1 cut(s) 748
BglI GCCNNNNNGGC 1 cut(s) 44
BglII AGATCT 1 cut(s) 862
BisI GCNGC 1 cut(s) 36
BlnI CCTAGG 1 cut(s) 590
BlsI GCNGC 1 cut(s) 37
Bme1390I CCNGG 4 cut(s) 71, 471, 1040, 1096
Bme18I GGWCC 2 cut(s) 95, 1091
BmeT110I CYCGRG 1 cut(s) 660
BmgT120I GGNCC 5 cut(s) 95, 466, 614, 1091, 1169
BmiI GGNNCC 8 cut(s) 324, 468, 567, 616, 634, 840, 1092, 1093
BmrFI CCNGG 4 cut(s) 71, 471, 1040, 1096
BmtI GCTAGC 1 cut(s) 30
BpiI GAAGAC 1 cut(s) 134
BplI GAGNNNNNCTC 2 cut(s) 508, 540
BpmI CTGGAG 2 cut(s) 248, 279
Bpu10I CCTNAGC 2 cut(s) 672, 1179
Bpu14I TTCGAA 2 cut(s) 391, 406
BpuEI CTTGAG 3 cut(s) 467, 777, 843
BpuMI CCSGG 1 cut(s) 71
BsaHI GRCGYC 1 cut(s) 633
BsaI GGTCTC 1 cut(s) 1104
BsaJI CCNNGG 6 cut(s) 69, 469, 590, 831, 1038, 1094
BsaXI ACNNNNNCTCC 2 cut(s) 84, 114
Bsc4I CCNNNNNNNGG 4 cut(s) 76, 77, 257, 530
Bse1I ACTGG 4 cut(s) 437, 496, 707, 892
BseBI CCWGG 3 cut(s) 471, 1040, 1096
BseDI CCNNGG 6 cut(s) 69, 469, 590, 831, 1038, 1094
BseGI GGATG 4 cut(s) 288, 303, 336, 1033
BseLI CCNNNNNNNGG 4 cut(s) 76, 77, 257, 530
BseMII CTCAG 5 cut(s) 128, 199, 539, 764, 1172
BseNI ACTGG 4 cut(s) 437, 496, 707, 892
BseRI GAGGAG 4 cut(s) 105, 245, 300, 578
BseYI CCCAGC 2 cut(s) 355, 1072
BshFI GGCC 3 cut(s) 467, 615, 1170
BshNI GGYRCC 1 cut(s) 632
BsiHKCI CYCGRG 1 cut(s) 660
BsiSI CCGG 1 cut(s) 71
BslFI GGGAC 1 cut(s) 1077
BslI CCNNNNNNNGG 4 cut(s) 76, 77, 257, 530
BsmAI GTCTC 1 cut(s) 1104
BsmFI GGGAC 1 cut(s) 1077
BsnI GGCC 3 cut(s) 467, 615, 1170
Bso31I GGTCTC 1 cut(s) 1104
BsoBI CYCGRG 1 cut(s) 660
Bsp119I TTCGAA 2 cut(s) 391, 406
Bsp1286I GDGCHC 1 cut(s) 217
Bsp143I GATC 5 cut(s) 73, 107, 169, 728, 862
BspACI CCGC 4 cut(s) 36, 773, 998, 1070
BspANI GGCC 3 cut(s) 467, 615, 1170
BspCNI CTCAG 5 cut(s) 127, 198, 538, 763, 1171
BspLI GGNNCC 8 cut(s) 324, 468, 567, 616, 634, 840, 1092, 1093
BspOI GCTAGC 1 cut(s) 30
BspPI GGATC 1 cut(s) 81
BspT104I TTCGAA 2 cut(s) 391, 406
BspT107I GGYRCC 1 cut(s) 632
BspTNI GGTCTC 1 cut(s) 1104
BsrI ACTGG 4 cut(s) 437, 496, 707, 892
BssECI CCNNGG 6 cut(s) 69, 469, 590, 831, 1038, 1094
BssMI GATC 5 cut(s) 73, 107, 169, 728, 862
BssNI GRCGYC 1 cut(s) 633
BssT1I CCWWGG 1 cut(s) 590
Bst2UI CCWGG 3 cut(s) 471, 1040, 1096
Bst4CI ACNGT 2 cut(s) 577, 690
Bst6I CTCTTC 3 cut(s) 152, 924, 1049
BstACI GRCGYC 1 cut(s) 633
BstBI TTCGAA 2 cut(s) 391, 406
BstC8I GCNNGC 1 cut(s) 28
BstDEI CTNAG 8 cut(s) 114, 185, 525, 672, 750, 951, 1158, 1179
BstF5I GGATG 4 cut(s) 288, 303, 336, 1033
BstH2I RGCGCY 1 cut(s) 636
BstHHI GCGC 1 cut(s) 635
BstKTI GATC 5 cut(s) 76, 110, 172, 731, 865
BstMAI GTCTC 1 cut(s) 1104
BstMBI GATC 5 cut(s) 73, 107, 169, 728, 862
BstMWI GCNNNNNNNGC 4 cut(s) 23, 32, 44, 487
BstNI CCWGG 3 cut(s) 471, 1040, 1096
BstNSI RCATGY 1 cut(s) 278
BstSCI CCNGG 4 cut(s) 69, 469, 1038, 1094
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 2 cut(s) 73, 862
BstXI CCANNNNNNTGG 1 cut(s) 226
BstYI RGATCY 2 cut(s) 73, 862
BsuI GTATCC 1 cut(s) 748
BsuRI GGCC 3 cut(s) 467, 615, 1170
BtgZI GCGATG 1 cut(s) 238
BtsCI GGATG 4 cut(s) 288, 303, 336, 1033
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 3 cut(s) 21, 533, 686
Cac8I GCNNGC 1 cut(s) 28
CfoI GCGC 1 cut(s) 635
Cfr13I GGNCC 5 cut(s) 95, 466, 614, 1091, 1169
CseI GACGC 2 cut(s) 23, 1118
Csp6I GTAC 1 cut(s) 182
CspCI CAANNNNNGTGG 2 cut(s) 802, 837
CviAII CATG 5 cut(s) 275, 422, 760, 883, 995
CviQI GTAC 1 cut(s) 182
DdeI CTNAG 8 cut(s) 114, 185, 525, 672, 750, 951, 1158, 1179
DinI GGCGCC 1 cut(s) 634
DpnI GATC 5 cut(s) 75, 109, 171, 730, 864
DpnII GATC 5 cut(s) 73, 107, 169, 728, 862
Eam1104I CTCTTC 3 cut(s) 152, 924, 1049
EarI CTCTTC 3 cut(s) 152, 924, 1049
EciI GGCGGA 1 cut(s) 788
Eco130I CCWWGG 1 cut(s) 590
Eco24I GRGCYC 1 cut(s) 217
Eco31I GGTCTC 1 cut(s) 1104
Eco47I GGWCC 2 cut(s) 95, 1091
Eco57I CTGAAG 1 cut(s) 1038
Eco88I CYCGRG 1 cut(s) 660
EcoO109I RGGNCCY 2 cut(s) 95, 1091
EcoRII CCWGG 3 cut(s) 469, 1038, 1094
EcoT14I CCWWGG 1 cut(s) 590
EcoT38I GRGCYC 1 cut(s) 217
EgeI GGCGCC 1 cut(s) 634
EheI GGCGCC 1 cut(s) 634
ErhI CCWWGG 1 cut(s) 590
FaeI CATG 5 cut(s) 278, 425, 763, 886, 998
FaiI YATR 9 cut(s) 237, 269, 276, 423, 654, 761, 788, 884, 996
FaqI GGGAC 1 cut(s) 1077
FatI CATG 5 cut(s) 274, 421, 759, 882, 994
Fnu4HI GCNGC 1 cut(s) 36
FokI GGATG 4 cut(s) 290, 295, 323, 1040
FriOI GRGCYC 1 cut(s) 217
Fsp4HI GCNGC 1 cut(s) 36
FspBI CTAG 5 cut(s) 27, 591, 722, 866, 1198
GlaI GCGC 1 cut(s) 634
GluI GCNGC 1 cut(s) 36
GsaI CCCAGC 2 cut(s) 359, 1076
GsuI CTGGAG 2 cut(s) 248, 279
HaeII RGCGCY 1 cut(s) 636
HaeIII GGCC 3 cut(s) 467, 615, 1170
HapII CCGG 1 cut(s) 71
HgaI GACGC 2 cut(s) 23, 1118
HhaI GCGC 1 cut(s) 635
Hin1I GRCGYC 1 cut(s) 633
Hin1II CATG 5 cut(s) 278, 425, 763, 886, 998
Hin6I GCGC 1 cut(s) 633
HinP1I GCGC 1 cut(s) 633
HindIII AAGCTT 1 cut(s) 980
HinfI GANTC 2 cut(s) 118, 158
HpaII CCGG 1 cut(s) 71
HphI GGTGA 1 cut(s) 1054
Hpy99I CGWCG 1 cut(s) 108
HpyAV CCTTC 6 cut(s) 447, 646, 776, 852, 954, 1152
HpyCH4III ACNGT 2 cut(s) 577, 690
HpyCH4V TGCA 2 cut(s) 490, 763
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 32, 44, 487
HpyF3I CTNAG 8 cut(s) 114, 185, 525, 672, 750, 951, 1158, 1179
Hsp92I GRCGYC 1 cut(s) 633
Hsp92II CATG 5 cut(s) 278, 425, 763, 886, 998
HspAI GCGC 1 cut(s) 633
KasI GGCGCC 1 cut(s) 632
KflI GGGWCCC 1 cut(s) 1091
Kzo9I GATC 5 cut(s) 73, 107, 169, 728, 862
LmnI GCTCC 2 cut(s) 565, 592
MaeI CTAG 5 cut(s) 27, 591, 722, 866, 1198
MaeIII GTNAC 3 cut(s) 19, 62, 1042
MalI GATC 5 cut(s) 75, 109, 171, 730, 864
MboI GATC 5 cut(s) 73, 107, 169, 728, 862
MfeI CAATTG 1 cut(s) 9
MflI RGATCY 2 cut(s) 73, 862
MhlI GDGCHC 1 cut(s) 217
MluCI AATT 6 cut(s) 9, 331, 342, 408, 741, 956
Mly113I GGCGCC 1 cut(s) 633
MmeI TCCRAC 1 cut(s) 1041
MseI TTAA 1 cut(s) 510
MspA1I CMGCKG 1 cut(s) 1072
MspI CCGG 1 cut(s) 71
MspR9I CCNGG 4 cut(s) 71, 471, 1040, 1096
MunI CAATTG 1 cut(s) 9
MvaI CCWGG 3 cut(s) 471, 1040, 1096
MwoI GCNNNNNNNGC 4 cut(s) 23, 32, 44, 487
NarI GGCGCC 1 cut(s) 633
NciI CCSGG 1 cut(s) 71
NdeII GATC 5 cut(s) 73, 107, 169, 728, 862
NheI GCTAGC 1 cut(s) 26
NlaIII CATG 5 cut(s) 278, 425, 763, 886, 998
NlaIV GGNNCC 8 cut(s) 324, 468, 567, 616, 634, 840, 1092, 1093
NmuCI GTSAC 2 cut(s) 19, 1042
NspI RCATGY 1 cut(s) 278
NspV TTCGAA 2 cut(s) 391, 406
PaeR7I CTCGAG 1 cut(s) 660
PfeI GAWTC 2 cut(s) 118, 158
PflFI GACNNNGTC 1 cut(s) 17
PkrI GCNGC 1 cut(s) 37
PluTI GGCGCC 1 cut(s) 636
PpuMI RGGWCCY 2 cut(s) 95, 1091
Psp5II RGGWCCY 2 cut(s) 95, 1091
Psp6I CCWGG 3 cut(s) 469, 1038, 1094
PspFI CCCAGC 2 cut(s) 355, 1072
PspGI CCWGG 3 cut(s) 469, 1038, 1094
PspN4I GGNNCC 8 cut(s) 324, 468, 567, 616, 634, 840, 1092, 1093
PspPI GGNCC 5 cut(s) 95, 466, 614, 1091, 1169
PspPPI RGGWCCY 2 cut(s) 95, 1091
PsuI RGATCY 2 cut(s) 73, 862
PsyI GACNNNGTC 1 cut(s) 17
RsaI GTAC 1 cut(s) 183
RsaNI GTAC 1 cut(s) 182
SaqAI TTAA 1 cut(s) 510
SatI GCNGC 1 cut(s) 36
Sau3AI GATC 5 cut(s) 73, 107, 169, 728, 862
Sau96I GGNCC 5 cut(s) 95, 466, 614, 1091, 1169
ScrFI CCNGG 4 cut(s) 71, 471, 1040, 1096
SduI GDGCHC 1 cut(s) 217
SfoI GGCGCC 1 cut(s) 634
Sfr274I CTCGAG 1 cut(s) 660
SfuI TTCGAA 2 cut(s) 391, 406
SinI GGWCC 2 cut(s) 95, 1091
SlaI CTCGAG 1 cut(s) 660
SmlI CTYRAG 4 cut(s) 446, 660, 792, 858
SmoI CTYRAG 4 cut(s) 446, 660, 792, 858
Sse9I AATT 6 cut(s) 9, 331, 342, 408, 741, 956
SsiI CCGC 4 cut(s) 36, 773, 998, 1070
SspDI GGCGCC 1 cut(s) 632
SspMI CTAG 5 cut(s) 27, 591, 722, 866, 1198
StyD4I CCNGG 4 cut(s) 69, 469, 1038, 1094
StyI CCWWGG 1 cut(s) 590
TaaI ACNGT 2 cut(s) 577, 690
TaqI TCGA 5 cut(s) 106, 391, 406, 661, 925
TaqII GACCGA 2 cut(s) 146, 151
TasI AATT 6 cut(s) 9, 331, 342, 408, 741, 956
TauI GCSGC 1 cut(s) 38
TfiI GAWTC 2 cut(s) 118, 158
Tru1I TTAA 1 cut(s) 510
Tru9I TTAA 1 cut(s) 510
TscAI CASTG 3 cut(s) 28, 533, 693
TseFI GTSAC 2 cut(s) 19, 1042
Tsp45I GTSAC 2 cut(s) 19, 1042
TspDTI ATGAA 2 cut(s) 284, 325
TspRI CASTG 3 cut(s) 28, 533, 693
Tth111I GACNNNGTC 1 cut(s) 17
VpaK11BI GGWCC 2 cut(s) 95, 1091
XapI RAATTY 1 cut(s) 956
XceI RCATGY 1 cut(s) 278
XhoI CTCGAG 1 cut(s) 660
XmaJI CCTAGG 1 cut(s) 590
XspI CTAG 5 cut(s) 27, 591, 722, 866, 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.