Rmu_sc0001890.1_g000006

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001890.1
OG0000169
Physical Location & Seq
Forward (+)
45337 .. 47837
2501 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001890.1_g000006.1.cds

Sequence Viewer

Length: 1707 bp
atggcatccattgacgcggtaacggcgagttttgctgcctcgcttgccctggccgaagggggacgcgcccctgacctggggaagattggcggaggtccagtgcggaagtcctcccaatcttttctcctcagaaagcctttgactcagaaacccatagacccaaaggcattcatgcctcacttccaccgaacctggatggtggataaggattttagggttcaagagtgtcctggggacctgttcttgttctcattcgctgctgcacgtgatcgaaacaaggttattcgagggggcgtatggtgttttgaccgagccccggtctgttttgaagtgtatgatggagtcaagcctctacatgaacttctgtttaaacatctgcggatctggactagggtttctggcatacctcctctgtatgaagaacccgagaatctcaccttgattggcacccttttgggtggttttttggaggtttctggcatacctcctctgtatgaagaactcgagaatctcaccttgattggcaaccttttgggcggttttttggagtatgacaagaaggaatttaagaaggggtttcaattcgagcttctgcgggggagatgcactcaatgtggcttgctcacacatgctggcctttcttgcgaggaacccactgtagtaaaccctacacctagggttttacactttcccggagtttcgaccttagggaattcctttgccttctctgctaagcatcagggagaccttctctctccttccccaaccgtcccaaggaagaaggggcctggttttcgtcgcgtggagcgcccgaccttagagctttcttctcctagtgagatggctccaccagaagtcaatattggggtggcagccattactttgcgcaggaattcctttgccttctctgctaagcatcagggagaccttctctctccttccccaaccgtcccaaggaagaaggggcctggttttcgtcgcgtggagcgcccgaccttagagctttcttctcctagtgagatggctccaccagaagtcaatattggggtggcagccattactttgcggcacggtttagagggtacacagaagcaccaatctgttttgcagtctaaaaagcgggagcgtagtggtgcttgccatcctagtcccaagaagtttaaatcaatcttgggtggcaagattccaacactgcctgctgaggcacttggtctccttgaggaggatggcgacctcactttggtctcgttgaaaaagaagtctggtaggcctcttggaagcaagaatgagactcaacgtgcaaataagaagctggatgcggaggatccgaatccgaacttggtggaagtggtggcgggcgcggaggatccgaagagggaaggggaggaggcgaatgagaaagtaggggtggaggatccgaaaagggaagtggattgtgaagcggaggatccgagtccgaacccggtggaggtggtggcgggtgcggaggatccgaagagggaagaggaaaatgagaaagcagggtggaggatccaaaggggaagtggattgggaagaggaggatccaaaattgaaacccgacattgctccttctctgctctctcgctcagtctctgcaatttcccaaggatgaaggcagttcccctacaaatctgttgttgtttagtttcaatgtcttcaaagacaacaaagagcctattgtggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

568

Amino Acids

62.05

Weight (kDa)

8.82

Isoelectric Point (pI)

51.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 887
AccB1I GGYRCC 1 cut(s) 446
AccII CGCG 5 cut(s) 17, 66, 801, 981, 1361
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 3 cut(s) 563, 712, 892
AcvI CACGTG 1 cut(s) 266
AfaI GTAC 1 cut(s) 1084
AfiI CCNNNNNNNGG 8 cut(s) 76, 77, 316, 774, 954, 1222, 1240, 1468
AgsI TTSAA 7 cut(s) 221, 329, 581, 1252, 1574, 1671, 1680
AjnI CCWGG 6 cut(s) 48, 75, 191, 229, 787, 967
AjuI GAANNNNNNNTTGG 6 cut(s) 846, 878, 1026, 1058, 1322, 1354
AluBI AGCT 4 cut(s) 589, 823, 1003, 1312
AluI AGCT 4 cut(s) 589, 823, 1003, 1312
Alw26I GTCTC 6 cut(s) 738, 918, 1217, 1249, 1283, 1616
AlwNI CAGNNNCTG 1 cut(s) 1614
Ama87I CYCGRG 2 cut(s) 425, 503
AoxI GGCC 5 cut(s) 51, 634, 785, 965, 1268
ApeKI GCWGC 5 cut(s) 35, 257, 260, 872, 1052
ApoI RAATTY 3 cut(s) 563, 712, 892
AspA2I CCTAGG 1 cut(s) 674
AspLEI GCGC 5 cut(s) 68, 810, 888, 990, 1361
AspS9I GGNCC 4 cut(s) 95, 235, 785, 965
AsuC2I CCSGG 3 cut(s) 317, 693, 1463
AsuHPI GGTGA 2 cut(s) 427, 505
AvaI CYCGRG 2 cut(s) 425, 503
AvaII GGWCC 2 cut(s) 95, 235
AvrII CCTAGG 1 cut(s) 674
AxyI CCTNAGG 1 cut(s) 706
BamHI GGATCC 7 cut(s) 1324, 1366, 1414, 1447, 1489, 1530, 1562
BanI GGYRCC 1 cut(s) 446
BanII GRGCYC 1 cut(s) 316
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 1668
BbvCI CCTCAGC 1 cut(s) 1200
BbvI GCAGC 5 cut(s) 22, 244, 247, 884, 1064
BccI CCATC 6 cut(s) 190, 332, 835, 1015, 1149, 1220
BceAI ACGGC 1 cut(s) 39
BciT130I CCWGG 6 cut(s) 50, 77, 193, 231, 789, 969
BcnI CCSGG 3 cut(s) 317, 693, 1463
BcoDI GTCTC 6 cut(s) 738, 918, 1217, 1249, 1283, 1616
BfaI CTAG 5 cut(s) 390, 675, 834, 1014, 1146
BfmI CTRYAG 1 cut(s) 657
BfoI RGCGCY 2 cut(s) 811, 991
BisI GCNGC 6 cut(s) 36, 258, 261, 873, 1053, 1067
BlnI CCTAGG 1 cut(s) 674
BlpI GCTNAGC 2 cut(s) 732, 912
BlsI GCNGC 6 cut(s) 37, 259, 262, 874, 1054, 1068
Bme1390I CCNGG 9 cut(s) 50, 77, 193, 231, 317, 693, 789, 969, 1463
Bme18I GGWCC 2 cut(s) 95, 235
BmeT110I CYCGRG 2 cut(s) 425, 503
BmgT120I GGNCC 4 cut(s) 95, 235, 785, 965
BmrFI CCNGG 9 cut(s) 50, 77, 193, 231, 317, 693, 789, 969, 1463
BmsI GCATC 5 cut(s) 14, 593, 745, 925, 1306
BpiI GAAGAC 1 cut(s) 1668
BplI GAGNNNNNCTC 6 cut(s) 592, 624, 735, 767, 915, 947
Bpu10I CCTNAGC 1 cut(s) 1200
Bpu1102I GCTNAGC 2 cut(s) 732, 912
BpuEI CTTGAG 1 cut(s) 1238
BpuMI CCSGG 3 cut(s) 317, 693, 1463
BsaAI YACGTR 1 cut(s) 266
BsaBI GATNNNNATC 1 cut(s) 1329
BsaI GGTCTC 4 cut(s) 738, 918, 1217, 1249
BsaJI CCNNGG 8 cut(s) 48, 76, 230, 315, 674, 773, 953, 1625
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 1197, 1227
Bsc4I CCNNNNNNNGG 8 cut(s) 76, 77, 316, 774, 954, 1222, 1240, 1468
Bse1I ACTGG 1 cut(s) 98
Bse21I CCTNAGG 1 cut(s) 706
Bse3DI GCAATG 1 cut(s) 1582
Bse8I GATNNNNATC 1 cut(s) 1329
BseBI CCWGG 6 cut(s) 50, 77, 193, 231, 789, 969
BseDI CCNNGG 8 cut(s) 48, 76, 230, 315, 674, 773, 953, 1625
BseGI GGATG 6 cut(s) 5, 201, 1141, 1231, 1321, 1635
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 8 cut(s) 76, 77, 316, 774, 954, 1222, 1240, 1468
BseMI GCAATG 1 cut(s) 1582
BseMII CTCAG 4 cut(s) 142, 158, 1191, 1621
BseNI ACTGG 1 cut(s) 98
BseRI GAGGAG 6 cut(s) 116, 399, 477, 1235, 1400, 1572
BseXI GCAGC 5 cut(s) 22, 244, 247, 884, 1064
BsgI GTGCAG 1 cut(s) 246
Bsh1236I CGCG 5 cut(s) 17, 66, 801, 981, 1361
BshFI GGCC 5 cut(s) 53, 636, 787, 967, 1270
BshNI GGYRCC 1 cut(s) 446
BsiHKCI CYCGRG 2 cut(s) 425, 503
BsiSI CCGG 3 cut(s) 317, 693, 1463
BslFI GGGAC 5 cut(s) 75, 248, 755, 935, 1134
BslI CCNNNNNNNGG 8 cut(s) 76, 77, 316, 774, 954, 1222, 1240, 1468
BsmAI GTCTC 6 cut(s) 738, 918, 1217, 1249, 1283, 1616
BsmFI GGGAC 5 cut(s) 75, 248, 755, 935, 1134
BsmI GAATGC 1 cut(s) 167
BsnI GGCC 5 cut(s) 53, 636, 787, 967, 1270
Bso31I GGTCTC 4 cut(s) 738, 918, 1217, 1249
BsoBI CYCGRG 2 cut(s) 425, 503
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
Bsp1720I GCTNAGC 2 cut(s) 732, 912
BspANI GGCC 5 cut(s) 53, 636, 787, 967, 1270
BspCNI CTCAG 4 cut(s) 141, 157, 1192, 1620
BspFNI CGCG 5 cut(s) 17, 66, 801, 981, 1361
BspT107I GGYRCC 1 cut(s) 446
BspTNI GGTCTC 4 cut(s) 738, 918, 1217, 1249
BsrDI GCAATG 1 cut(s) 1582
BsrI ACTGG 1 cut(s) 98
BssECI CCNNGG 8 cut(s) 48, 76, 230, 315, 674, 773, 953, 1625
BssMI GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
BssT1I CCWWGG 4 cut(s) 674, 773, 953, 1625
Bst2UI CCWGG 6 cut(s) 50, 77, 193, 231, 789, 969
Bst4CI ACNGT 4 cut(s) 658, 769, 949, 1073
Bst6I CTCTTC 4 cut(s) 1367, 1490, 1497, 1549
BstBAI YACGTR 1 cut(s) 266
BstC8I GCNNGC 6 cut(s) 45, 620, 634, 1138, 1197, 1357
BstDEI CTNAG 9 cut(s) 128, 144, 706, 732, 817, 912, 997, 1200, 1607
BstENI CCTNNNNNAGG 1 cut(s) 1220
BstF5I GGATG 6 cut(s) 5, 201, 1141, 1231, 1321, 1635
BstFNI CGCG 5 cut(s) 17, 66, 801, 981, 1361
BstH2I RGCGCY 2 cut(s) 811, 991
BstHHI GCGC 5 cut(s) 68, 810, 888, 990, 1361
BstKTI GATC 9 cut(s) 271, 384, 1327, 1369, 1417, 1450, 1492, 1533, 1565
BstMAI GTCTC 6 cut(s) 738, 918, 1217, 1249, 1283, 1616
BstMBI GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
BstMWI GCNNNNNNNGC 8 cut(s) 23, 32, 44, 642, 728, 807, 908, 987
BstNI CCWGG 6 cut(s) 50, 77, 193, 231, 789, 969
BstNSI RCATGY 1 cut(s) 632
BstSCI CCNGG 9 cut(s) 48, 75, 191, 229, 315, 691, 787, 967, 1461
BstSFI CTRYAG 1 cut(s) 657
BstUI CGCG 5 cut(s) 17, 66, 801, 981, 1361
BstV1I GCAGC 5 cut(s) 22, 244, 247, 884, 1064
BstV2I GAAGAC 1 cut(s) 1668
BstX2I RGATCY 8 cut(s) 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
BstYI RGATCY 8 cut(s) 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
Bsu36I CCTNAGG 1 cut(s) 706
BsuRI GGCC 5 cut(s) 53, 636, 787, 967, 1270
BtsCI GGATG 6 cut(s) 5, 201, 1141, 1231, 1321, 1635
BtsI GCAGTG 1 cut(s) 1190
BtsIMutI CAGTG 3 cut(s) 105, 654, 1190
Cac8I GCNNGC 6 cut(s) 45, 620, 634, 1138, 1197, 1357
CaiI CAGNNNCTG 1 cut(s) 1614
CfoI GCGC 5 cut(s) 68, 810, 888, 990, 1361
Cfr13I GGNCC 4 cut(s) 95, 235, 785, 965
CseI GACGC 2 cut(s) 23, 72
Csp6I GTAC 1 cut(s) 1083
CviAII CATG 3 cut(s) 172, 356, 629
CviQI GTAC 1 cut(s) 1083
DdeI CTNAG 9 cut(s) 128, 144, 706, 732, 817, 912, 997, 1200, 1607
DpnI GATC 9 cut(s) 270, 383, 1326, 1368, 1416, 1449, 1491, 1532, 1564
DpnII GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
DraI TTTAAA 2 cut(s) 370, 1162
EaeI YGGCCR 1 cut(s) 51
Eam1104I CTCTTC 4 cut(s) 1367, 1490, 1497, 1549
EarI CTCTTC 4 cut(s) 1367, 1490, 1497, 1549
EciI GGCGGA 1 cut(s) 105
Eco130I CCWWGG 4 cut(s) 674, 773, 953, 1625
Eco147I AGGCCT 1 cut(s) 1270
Eco24I GRGCYC 1 cut(s) 316
Eco31I GGTCTC 4 cut(s) 738, 918, 1217, 1249
Eco47I GGWCC 2 cut(s) 95, 235
Eco72I CACGTG 1 cut(s) 266
Eco81I CCTNAGG 1 cut(s) 706
Eco88I CYCGRG 2 cut(s) 425, 503
EcoNI CCTNNNNNAGG 1 cut(s) 1220
EcoO109I RGGNCCY 3 cut(s) 235, 785, 965
EcoRI GAATTC 2 cut(s) 712, 892
EcoRII CCWGG 6 cut(s) 48, 75, 191, 229, 787, 967
EcoT14I CCWWGG 4 cut(s) 674, 773, 953, 1625
EcoT38I GRGCYC 1 cut(s) 316
ErhI CCWWGG 4 cut(s) 674, 773, 953, 1625
FaeI CATG 3 cut(s) 175, 359, 632
FaqI GGGAC 5 cut(s) 75, 248, 755, 935, 1134
FatI CATG 3 cut(s) 171, 355, 628
FauI CCCGC 4 cut(s) 588, 1113, 1348, 1471
Fnu4HI GCNGC 6 cut(s) 36, 258, 261, 873, 1053, 1067
FokI GGATG 5 cut(s) 208, 1128, 1238, 1328, 1642
FriOI GRGCYC 1 cut(s) 316
Fsp4HI GCNGC 6 cut(s) 36, 258, 261, 873, 1053, 1067
FspBI CTAG 5 cut(s) 390, 675, 834, 1014, 1146
FspI TGCGCA 1 cut(s) 887
GlaI GCGC 5 cut(s) 67, 809, 887, 989, 1360
GluI GCNGC 6 cut(s) 36, 258, 261, 873, 1053, 1067
HaeII RGCGCY 2 cut(s) 811, 991
HaeIII GGCC 5 cut(s) 53, 636, 787, 967, 1270
HapII CCGG 3 cut(s) 317, 693, 1463
HgaI GACGC 2 cut(s) 23, 72
HhaI GCGC 5 cut(s) 68, 810, 888, 990, 1361
Hin1II CATG 3 cut(s) 175, 359, 632
Hin6I GCGC 5 cut(s) 66, 808, 886, 988, 1359
HinP1I GCGC 5 cut(s) 66, 808, 886, 988, 1359
HinfI GANTC 8 cut(s) 142, 342, 430, 508, 1183, 1291, 1330, 1453
HpaII CCGG 3 cut(s) 317, 693, 1463
HphI GGTGA 2 cut(s) 427, 505
Hpy166II GTNNAC 2 cut(s) 664, 1085
Hpy188I TCNGA 9 cut(s) 131, 147, 1329, 1335, 1371, 1419, 1452, 1458, 1494
Hpy188III TCNNGA 3 cut(s) 221, 385, 505
Hpy8I GTNNAC 2 cut(s) 664, 1085
Hpy99I CGWCG 2 cut(s) 801, 981
HpyCH4III ACNGT 4 cut(s) 658, 769, 949, 1073
HpyCH4IV ACGT 2 cut(s) 265, 1297
HpyCH4V TGCA 5 cut(s) 263, 606, 1108, 1301, 1617
HpyF10VI GCNNNNNNNGC 8 cut(s) 23, 32, 44, 642, 728, 807, 908, 987
HpyF3I CTNAG 9 cut(s) 128, 144, 706, 732, 817, 912, 997, 1200, 1607
HpySE526I ACGT 2 cut(s) 265, 1297
Hsp92II CATG 3 cut(s) 175, 359, 632
HspAI GCGC 5 cut(s) 66, 808, 886, 988, 1359
Kzo9I GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
LmnI GCTCC 6 cut(s) 805, 850, 985, 1030, 1123, 1592
Lsp1109I GCAGC 5 cut(s) 22, 244, 247, 884, 1064
LweI GCATC 5 cut(s) 14, 593, 745, 925, 1306
MaeI CTAG 5 cut(s) 390, 675, 834, 1014, 1146
MaeII ACGT 2 cut(s) 265, 1297
MaeIII GTNAC 1 cut(s) 19
MalI GATC 9 cut(s) 270, 383, 1326, 1368, 1416, 1449, 1491, 1532, 1564
MboI GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
MflI RGATCY 8 cut(s) 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 6 cut(s) 563, 581, 712, 892, 1569, 1618
MlyI GAGTC 4 cut(s) 136, 351, 1285, 1462
MmeI TCCRAC 1 cut(s) 1211
MseI TTAA 3 cut(s) 369, 567, 1161
MspI CCGG 3 cut(s) 317, 693, 1463
MspR9I CCNGG 9 cut(s) 50, 77, 193, 231, 317, 693, 789, 969, 1463
MssI GTTTAAAC 1 cut(s) 370
Mva1269I GAATGC 1 cut(s) 167
MvaI CCWGG 6 cut(s) 50, 77, 193, 231, 789, 969
MvnI CGCG 5 cut(s) 17, 66, 801, 981, 1361
MwoI GCNNNNNNNGC 8 cut(s) 23, 32, 44, 642, 728, 807, 908, 987
NciI CCSGG 3 cut(s) 317, 693, 1463
NdeII GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
NlaIII CATG 3 cut(s) 175, 359, 632
NsbI TGCGCA 1 cut(s) 887
NspI RCATGY 1 cut(s) 632
PaeR7I CTCGAG 1 cut(s) 503
PceI AGGCCT 1 cut(s) 1270
PctI GAATGC 1 cut(s) 167
PfeI GAWTC 4 cut(s) 430, 508, 1183, 1330
PfoI TCCNGGA 1 cut(s) 691
PkrI GCNGC 6 cut(s) 37, 259, 262, 874, 1054, 1068
PleI GAGTC 4 cut(s) 136, 350, 1285, 1461
PmaCI CACGTG 1 cut(s) 266
PmeI GTTTAAAC 1 cut(s) 370
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 4 cut(s) 136, 350, 1285, 1461
Ppu21I YACGTR 1 cut(s) 266
PpuMI RGGWCCY 1 cut(s) 235
Psp5II RGGWCCY 1 cut(s) 235
Psp6I CCWGG 6 cut(s) 48, 75, 191, 229, 787, 967
PspCI CACGTG 1 cut(s) 266
PspGI CCWGG 6 cut(s) 48, 75, 191, 229, 787, 967
PspPI GGNCC 4 cut(s) 95, 235, 785, 965
PspPPI RGGWCCY 1 cut(s) 235
PstNI CAGNNNCTG 1 cut(s) 1614
PsuI RGATCY 8 cut(s) 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
RsaI GTAC 1 cut(s) 1084
RsaNI GTAC 1 cut(s) 1083
SaqAI TTAA 3 cut(s) 369, 567, 1161
SatI GCNGC 6 cut(s) 36, 258, 261, 873, 1053, 1067
Sau3AI GATC 9 cut(s) 268, 381, 1324, 1366, 1414, 1447, 1489, 1530, 1562
Sau96I GGNCC 4 cut(s) 95, 235, 785, 965
SchI GAGTC 4 cut(s) 136, 351, 1285, 1462
ScrFI CCNGG 9 cut(s) 50, 77, 193, 231, 317, 693, 789, 969, 1463
SduI GDGCHC 1 cut(s) 316
SfaNI GCATC 5 cut(s) 14, 593, 745, 925, 1306
SfcI CTRYAG 1 cut(s) 657
Sfr274I CTCGAG 1 cut(s) 503
SinI GGWCC 2 cut(s) 95, 235
SlaI CTCGAG 1 cut(s) 503
SmlI CTYRAG 2 cut(s) 503, 1217
SmoI CTYRAG 2 cut(s) 503, 1217
Sse9I AATT 6 cut(s) 563, 581, 712, 892, 1569, 1618
SseBI AGGCCT 1 cut(s) 1270
SspI AATATT 2 cut(s) 862, 1042
SspMI CTAG 5 cut(s) 390, 675, 834, 1014, 1146
StuI AGGCCT 1 cut(s) 1270
StyD4I CCNGG 9 cut(s) 48, 75, 191, 229, 315, 691, 787, 967, 1461
StyI CCWWGG 4 cut(s) 674, 773, 953, 1625
TaaI ACNGT 4 cut(s) 658, 769, 949, 1073
TaiI ACGT 2 cut(s) 268, 1300
TaqI TCGA 5 cut(s) 271, 286, 504, 585, 701
TaqII GACCGA 1 cut(s) 324
TasI AATT 6 cut(s) 563, 581, 712, 892, 1569, 1618
TauI GCSGC 1 cut(s) 1069
TfiI GAWTC 4 cut(s) 430, 508, 1183, 1330
Tru1I TTAA 3 cut(s) 369, 567, 1161
Tru9I TTAA 3 cut(s) 369, 567, 1161
TscAI CASTG 3 cut(s) 105, 661, 1197
TseI GCWGC 5 cut(s) 35, 257, 260, 872, 1052
TspDTI ATGAA 5 cut(s) 160, 372, 432, 510, 1646
TspRI CASTG 3 cut(s) 105, 661, 1197
VpaK11BI GGWCC 2 cut(s) 95, 235
XagI CCTNNNNNAGG 1 cut(s) 1220
XapI RAATTY 3 cut(s) 563, 712, 892
XceI RCATGY 1 cut(s) 632
XcmI CCANNNNNNNNNTGG 1 cut(s) 1541
XhoI CTCGAG 1 cut(s) 503
XmaJI CCTAGG 1 cut(s) 674
XspI CTAG 5 cut(s) 390, 675, 834, 1014, 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.