Rmu_sc0000427.1_g000006

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000427.1
OG0000169
Physical Location & Seq
Forward (+)
24575 .. 25879
1305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000427.1_g000006.1.cds

Sequence Viewer

Length: 1239 bp
atggcttccatcgacgttgtgactgctagttttgctgcctctctggcacttgctgacggggggaacgcccctgatttggggaagcttggaggaggttcggttcgtaggtcttctcagtcctttcccctttgtaagccgctcactcgcaaacctgttgatcccgctgctttcaaatcccacttccttcggacatggatggtggaaaaggaattcaggattcaagcacgagcagataaccgcttcctgttttcatttggttctatccgggatcgaaacaaggttcttgagggtggggtgtggtgttatgatagggctccggtctgcctggaagaatatgatggtgttctctccattgtggacatccctatgaagcacattagaatttgggttaaggtttctggtgtccctcctctctatgaggaaccggaaaacctcatacttattgggaatcttctcgggggctatttggattacgacaagaaggagttccgtaaaggtagcatccgcatcctgttctctcatgatgtttctaaacccgttctattggagcgtcgagttttcttggctccaggtgttgagccgatattgcaattccagtttgaacatctccagggtcgttgccctcagtgtggactggttacgcacgctggagagaagtgtgaggaacctaatgctgttatttcgacccctagggttttgaattttggtggtagtcctgtcacctttggcagagttttctctttctcagcccagaatagtcgagatctgcctatgccctcgtctaccctactgaagaagaagacaaaaccagttattcggcgaatggaaagatcatcttctgaatctgctgctcaggaggataccgtggctaacacagtagagttggtacatatgagctgcgatgctgggttgcaggatcaagctactgcgttggtttcgatgatagcgtctgaacctgggttagatgccctaactgttactactgggactcctaagttcaagactatattggggggtaagatactcactttgcatgctgatgcccttggattagttgaagctaaggatgatgttgctcttgtgaagctaaagaagaagactggtaggccacttggaagtaagaacaagggccctaggtcccaaaagaaggtggggataactcctctacgcctcacctacccatctgctactactgttcagaaagttggccctaaggataagggcaaaggaaaactctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

412

Amino Acids

44.95

Weight (kDa)

9.55

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 139
AccI GTMKAC 1 cut(s) 782
AciI CCGC 4 cut(s) 137, 162, 238, 505
AclWI GGATC 3 cut(s) 152, 276, 924
AcsI RAATTY 3 cut(s) 209, 381, 700
AcuI CTGAAG 1 cut(s) 812
AfaI GTAC 1 cut(s) 888
AfiI CCNNNNNNNGG 4 cut(s) 76, 77, 629, 1147
AgsI TTSAA 6 cut(s) 172, 221, 602, 700, 1000, 1058
AjnI CCWGG 4 cut(s) 324, 568, 609, 955
AloI GAACNNNNNNTCC 2 cut(s) 84, 116
AluBI AGCT 5 cut(s) 85, 897, 923, 1061, 1087
AluI AGCT 5 cut(s) 85, 897, 923, 1061, 1087
AlwI GGATC 3 cut(s) 152, 276, 924
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 3 cut(s) 1106, 1129, 1207
ApaI GGGCCC 1 cut(s) 1133
ApeKI GCWGC 4 cut(s) 35, 164, 848, 897
ApoI RAATTY 3 cut(s) 209, 381, 700
Asp700I GAANNNNTTC 1 cut(s) 485
AspA2I CCTAGG 2 cut(s) 689, 1133
AspS9I GGNCC 4 cut(s) 1129, 1130, 1137, 1208
AsuC2I CCSGG 1 cut(s) 266
AsuHPI GGTGA 2 cut(s) 712, 1165
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 1 cut(s) 1137
AvrII CCTAGG 2 cut(s) 689, 1133
AxyI CCTNAGG 1 cut(s) 1212
BaeGI GKGCMC 1 cut(s) 1133
BanII GRGCYC 2 cut(s) 316, 1133
BauI CACGAG 1 cut(s) 225
BbsI GAAGAC 3 cut(s) 102, 806, 1103
BbvI GCAGC 4 cut(s) 22, 151, 835, 884
BccI CCATC 4 cut(s) 17, 190, 332, 1189
BciT130I CCWGG 4 cut(s) 326, 570, 611, 957
BciVI GTATCC 1 cut(s) 853
BcnI CCSGG 1 cut(s) 266
BfaI CTAG 3 cut(s) 27, 690, 1134
BfuI GTATCC 1 cut(s) 853
BglI GCCNNNNNGGC 1 cut(s) 44
BglII AGATCT 1 cut(s) 763
BisI GCNGC 5 cut(s) 36, 137, 165, 849, 898
BlnI CCTAGG 2 cut(s) 689, 1133
BlsI GCNGC 5 cut(s) 37, 138, 166, 850, 899
Bme1390I CCNGG 5 cut(s) 266, 326, 570, 611, 957
Bme18I GGWCC 1 cut(s) 1137
BmeT110I CYCGRG 1 cut(s) 455
BmgT120I GGNCC 4 cut(s) 1129, 1130, 1137, 1208
BmiI GGNNCC 6 cut(s) 315, 423, 567, 666, 1131, 1139
BmrFI CCNGG 5 cut(s) 266, 326, 570, 611, 957
BmrI ACTGGG 1 cut(s) 993
BmsI GCATC 5 cut(s) 510, 516, 892, 955, 1030
BmuI ACTGGG 1 cut(s) 993
BpiI GAAGAC 3 cut(s) 102, 806, 1103
BpmI CTGGAG 3 cut(s) 552, 593, 669
Bpu10I CCTNAGC 2 cut(s) 852, 1062
BpuEI CTTGAG 1 cut(s) 305
BpuMI CCSGG 1 cut(s) 266
BsaJI CCNNGG 6 cut(s) 610, 689, 864, 956, 1045, 1133
BsaWI WCCGGW 2 cut(s) 316, 424
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 973, 1003
Bsc4I CCNNNNNNNGG 4 cut(s) 76, 77, 629, 1147
Bse1I ACTGG 5 cut(s) 595, 639, 809, 988, 1105
Bse21I CCTNAGG 1 cut(s) 1212
BseBI CCWGG 4 cut(s) 326, 570, 611, 957
BseDI CCNNGG 6 cut(s) 610, 689, 864, 956, 1045, 1133
BseGI GGATG 5 cut(s) 201, 360, 501, 507, 1072
BseLI CCNNNNNNNGG 4 cut(s) 76, 77, 629, 1147
BseMII CTCAG 4 cut(s) 128, 638, 759, 866
BseNI ACTGG 5 cut(s) 595, 639, 809, 988, 1105
BseRI GAGGAG 3 cut(s) 105, 399, 1152
BseSI GKGCMC 1 cut(s) 1133
BseXI GCAGC 4 cut(s) 22, 151, 835, 884
BseYI CCCAGC 1 cut(s) 905
BshFI GGCC 3 cut(s) 1108, 1131, 1209
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 3 cut(s) 265, 317, 425
BslFI GGGAC 3 cut(s) 389, 1000, 1123
BslI CCNNNNNNNGG 4 cut(s) 76, 77, 629, 1147
BsmFI GGGAC 3 cut(s) 389, 1000, 1123
BsnI GGCC 3 cut(s) 1108, 1131, 1209
BsoBI CYCGRG 1 cut(s) 455
Bsp120I GGGCCC 1 cut(s) 1129
Bsp1286I GDGCHC 2 cut(s) 316, 1133
Bsp143I GATC 5 cut(s) 157, 268, 763, 830, 916
BspACI CCGC 4 cut(s) 137, 162, 238, 505
BspANI GGCC 3 cut(s) 1108, 1131, 1209
BspCNI CTCAG 4 cut(s) 127, 637, 758, 865
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 6 cut(s) 315, 423, 567, 666, 1131, 1139
BspPI GGATC 3 cut(s) 152, 276, 924
BsrBI CCGCTC 1 cut(s) 139
BsrI ACTGG 5 cut(s) 595, 639, 809, 988, 1105
BssECI CCNNGG 6 cut(s) 610, 689, 864, 956, 1045, 1133
BssMI GATC 5 cut(s) 157, 268, 763, 830, 916
BssSI CACGAG 1 cut(s) 225
BssT1I CCWWGG 3 cut(s) 689, 1045, 1133
Bst2BI CACGAG 1 cut(s) 225
Bst2UI CCWGG 4 cut(s) 326, 570, 611, 957
Bst4CI ACNGT 4 cut(s) 865, 877, 976, 1195
BstC8I GCNNGC 2 cut(s) 645, 1035
BstDEI CTNAG 7 cut(s) 114, 624, 745, 852, 993, 1062, 1212
BstDSI CCRYGG 1 cut(s) 864
BstF5I GGATG 5 cut(s) 201, 360, 501, 507, 1072
BstKTI GATC 5 cut(s) 160, 271, 766, 833, 919
BstMBI GATC 5 cut(s) 157, 268, 763, 830, 916
BstMWI GCNNNNNNNGC 3 cut(s) 32, 44, 586
BstNI CCWGG 4 cut(s) 326, 570, 611, 957
BstNSI RCATGY 1 cut(s) 1037
BstSCI CCNGG 5 cut(s) 264, 324, 568, 609, 955
BstSLI GKGCMC 1 cut(s) 1133
BstV1I GCAGC 4 cut(s) 22, 151, 835, 884
BstV2I GAAGAC 3 cut(s) 102, 806, 1103
BstX2I RGATCY 1 cut(s) 763
BstYI RGATCY 1 cut(s) 763
Bsu36I CCTNAGG 1 cut(s) 1212
BsuI GTATCC 1 cut(s) 853
BsuRI GGCC 3 cut(s) 1108, 1131, 1209
BtgI CCRYGG 1 cut(s) 864
BtgZI GCGATG 1 cut(s) 915
BtsCI GGATG 5 cut(s) 201, 360, 501, 507, 1072
BtsIMutI CAGTG 1 cut(s) 632
Cac8I GCNNGC 2 cut(s) 645, 1035
CciI TCATGA 1 cut(s) 520
Cfr13I GGNCC 4 cut(s) 1129, 1130, 1137, 1208
CseI GACGC 2 cut(s) 539, 936
Csp6I GTAC 1 cut(s) 887
CviAII CATG 3 cut(s) 192, 521, 1034
CviQI GTAC 1 cut(s) 887
DdeI CTNAG 7 cut(s) 114, 624, 745, 852, 993, 1062, 1212
DpnI GATC 5 cut(s) 159, 270, 765, 832, 918
DpnII GATC 5 cut(s) 157, 268, 763, 830, 916
Eco130I CCWWGG 3 cut(s) 689, 1045, 1133
Eco24I GRGCYC 2 cut(s) 316, 1133
Eco47I GGWCC 1 cut(s) 1137
Eco57I CTGAAG 1 cut(s) 812
Eco81I CCTNAGG 1 cut(s) 1212
Eco88I CYCGRG 1 cut(s) 455
EcoO109I RGGNCCY 3 cut(s) 1129, 1130, 1137
EcoRI GAATTC 1 cut(s) 209
EcoRII CCWGG 4 cut(s) 324, 568, 609, 955
EcoT14I CCWWGG 3 cut(s) 689, 1045, 1133
EcoT38I GRGCYC 2 cut(s) 316, 1133
ErhI CCWWGG 3 cut(s) 689, 1045, 1133
FaeI CATG 3 cut(s) 195, 524, 1037
FalI AAGNNNNNCTT 2 cut(s) 820, 852
FaqI GGGAC 3 cut(s) 389, 1000, 1123
FatI CATG 3 cut(s) 191, 520, 1033
FauI CCCGC 1 cut(s) 169
FauNDI CATATG 1 cut(s) 891
FblI GTMKAC 1 cut(s) 782
Fnu4HI GCNGC 5 cut(s) 36, 137, 165, 849, 898
FokI GGATG 5 cut(s) 208, 347, 488, 494, 1079
FriOI GRGCYC 2 cut(s) 316, 1133
Fsp4HI GCNGC 5 cut(s) 36, 137, 165, 849, 898
FspBI CTAG 3 cut(s) 27, 690, 1134
GluI GCNGC 5 cut(s) 36, 137, 165, 849, 898
GsaI CCCAGC 1 cut(s) 909
GsuI CTGGAG 3 cut(s) 552, 593, 669
HaeIII GGCC 3 cut(s) 1108, 1131, 1209
HapII CCGG 3 cut(s) 265, 317, 425
HgaI GACGC 2 cut(s) 539, 936
Hin1II CATG 3 cut(s) 195, 524, 1037
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 4 cut(s) 217, 448, 842, 988
HpaII CCGG 3 cut(s) 265, 317, 425
HphI GGTGA 2 cut(s) 712, 1165
Hpy166II GTNNAC 3 cut(s) 358, 632, 783
Hpy188I TCNGA 4 cut(s) 189, 841, 952, 1200
Hpy188III TCNNGA 6 cut(s) 214, 284, 521, 761, 854, 1000
Hpy8I GTNNAC 3 cut(s) 358, 632, 783
Hpy99I CGWCG 2 cut(s) 17, 555
HpyAV CCTTC 3 cut(s) 194, 475, 1141
HpyCH4III ACNGT 4 cut(s) 865, 877, 976, 1195
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 3 cut(s) 589, 913, 1033
HpyF10VI GCNNNNNNNGC 3 cut(s) 32, 44, 586
HpyF3I CTNAG 7 cut(s) 114, 624, 745, 852, 993, 1062, 1212
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 3 cut(s) 195, 524, 1037
Kzo9I GATC 5 cut(s) 157, 268, 763, 830, 916
LmnI GCTCC 3 cut(s) 319, 547, 571
Lsp1109I GCAGC 4 cut(s) 22, 151, 835, 884
LweI GCATC 5 cut(s) 510, 516, 892, 955, 1030
MaeI CTAG 3 cut(s) 27, 690, 1134
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 4 cut(s) 19, 637, 718, 976
MalI GATC 5 cut(s) 159, 270, 765, 832, 918
MbiI CCGCTC 1 cut(s) 139
MboI GATC 5 cut(s) 157, 268, 763, 830, 916
MboII GAAGA 9 cut(s) 102, 341, 443, 805, 808, 811, 828, 1105, 1108
MflI RGATCY 1 cut(s) 763
MhlI GDGCHC 2 cut(s) 316, 1133
MluCI AATT 4 cut(s) 209, 381, 590, 700
MlyI GAGTC 1 cut(s) 982
MroXI GAANNNNTTC 1 cut(s) 485
MseI TTAA 1 cut(s) 390
MslI CAYNNNNRTG 2 cut(s) 365, 1038
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 3 cut(s) 265, 317, 425
MspR9I CCNGG 5 cut(s) 266, 326, 570, 611, 957
MvaI CCWGG 4 cut(s) 326, 570, 611, 957
MwoI GCNNNNNNNGC 3 cut(s) 32, 44, 586
NciI CCSGG 1 cut(s) 266
NdeI CATATG 1 cut(s) 891
NdeII GATC 5 cut(s) 157, 268, 763, 830, 916
NlaIII CATG 3 cut(s) 195, 524, 1037
NlaIV GGNNCC 6 cut(s) 315, 423, 567, 666, 1131, 1139
NmuCI GTSAC 2 cut(s) 19, 718
NspI RCATGY 1 cut(s) 1037
PaeI GCATGC 1 cut(s) 1037
PagI TCATGA 1 cut(s) 520
PcsI WCGNNNNNNNCGW 1 cut(s) 944
PdmI GAANNNNTTC 1 cut(s) 485
PfeI GAWTC 3 cut(s) 217, 448, 842
PfoI TCCNGGA 1 cut(s) 264
PkrI GCNGC 5 cut(s) 37, 138, 166, 850, 899
PleI GAGTC 1 cut(s) 982
PpsI GAGTC 1 cut(s) 982
PpuMI RGGWCCY 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 1137
Psp6I CCWGG 4 cut(s) 324, 568, 609, 955
PspFI CCCAGC 1 cut(s) 905
PspGI CCWGG 4 cut(s) 324, 568, 609, 955
PspN4I GGNNCC 6 cut(s) 315, 423, 567, 666, 1131, 1139
PspOMI GGGCCC 1 cut(s) 1129
PspPI GGNCC 4 cut(s) 1129, 1130, 1137, 1208
PspPPI RGGWCCY 1 cut(s) 1137
PsuI RGATCY 1 cut(s) 763
RsaI GTAC 1 cut(s) 888
RsaNI GTAC 1 cut(s) 887
RseI CAYNNNNRTG 2 cut(s) 365, 1038
SaqAI TTAA 1 cut(s) 390
SatI GCNGC 5 cut(s) 36, 137, 165, 849, 898
Sau3AI GATC 5 cut(s) 157, 268, 763, 830, 916
Sau96I GGNCC 4 cut(s) 1129, 1130, 1137, 1208
SchI GAGTC 1 cut(s) 982
ScrFI CCNGG 5 cut(s) 266, 326, 570, 611, 957
SduI GDGCHC 2 cut(s) 316, 1133
SfaNI GCATC 5 cut(s) 510, 516, 892, 955, 1030
SinI GGWCC 1 cut(s) 1137
SmiMI CAYNNNNRTG 2 cut(s) 365, 1038
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
SphI GCATGC 1 cut(s) 1037
Sse9I AATT 4 cut(s) 209, 381, 590, 700
SsiI CCGC 4 cut(s) 137, 162, 238, 505
SspMI CTAG 3 cut(s) 27, 690, 1134
StyD4I CCNGG 5 cut(s) 264, 324, 568, 609, 955
StyI CCWWGG 3 cut(s) 689, 1045, 1133
TaaI ACNGT 4 cut(s) 865, 877, 976, 1195
TaiI ACGT 1 cut(s) 18
TaqI TCGA 6 cut(s) 12, 271, 553, 683, 760, 938
TasI AATT 4 cut(s) 209, 381, 590, 700
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 3 cut(s) 217, 448, 842
Tru1I TTAA 1 cut(s) 390
Tru9I TTAA 1 cut(s) 390
TscAI CASTG 1 cut(s) 632
TseFI GTSAC 2 cut(s) 19, 718
TseI GCWGC 4 cut(s) 35, 164, 848, 897
Tsp45I GTSAC 2 cut(s) 19, 718
TspDTI ATGAA 2 cut(s) 240, 383
TspGWI ACGGA 1 cut(s) 479
TspRI CASTG 1 cut(s) 632
VpaK11BI GGWCC 1 cut(s) 1137
XapI RAATTY 3 cut(s) 209, 381, 700
XceI RCATGY 1 cut(s) 1037
XmaJI CCTAGG 2 cut(s) 689, 1133
XmiI GTMKAC 1 cut(s) 782
XmnI GAANNNNTTC 1 cut(s) 485
XspI CTAG 3 cut(s) 27, 690, 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.