Rorug02G0179700

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000169
Physical Location & Seq
Reverse (-)
16648505 .. 16651806
3302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0179700.1

Sequence Viewer

Length: 1005 bp
ATGGACGAGATGGCCGCCTATTACCCTCCACCGCCTCCGCCACCAGGCTCCGTCCACTATCCATACTACCACCACCACCAGCCACCTCAACCGCCTGGCCCCGTGGCCCCTCCGCCGCCGCAGCAGCAGCACCACCACTTGGTTCATCAGCCCTACTACCCTCCCCAGCCTCAGCCTTACGCTCCCTACGCGCCGCCACTCGTCGCCCAGGCCGCCTACGACGAGGTCCGGACCCTCTTCGTGGCCGGCCTACCCGAAGATGTGAAGCCCCGTGAAATCTACAACCTCTTCCGCGAGTTTCCGGGTTACGAGTCCTCTCACCTCCGAACCCCCACCGAGAAAACTCAGCCTTTTGCGTTCGCGGTGTTCTTGGACCAGCAATCTGCGATCGGAGCAATGCAAGCACTGAATGGGATGGTATTTGATCTTGAGAAGGGGTCGACATTATATATAGATCTAGCAAAATCTAATTCTAGGTCCAAGCGCTCAAGAACAGACGATGAAAGATCTGGCTCGGATAAGAAAGCTAGAGGTTCATCATATTCAAGGGCCACTTCTGATCCTGCAGGTGTTGGCAGCATTCACATGCCTGGAATGGGTAATTCTGCTTACAACATGATTGGTTATCCATCTGCACCAAGTCATGGCAGCTTCAGTGGCAGTGGTGTAAACGAGCCAATAGCCTCAAACATGAATAGTTCTTCAGCACAACATTTTCCACAAAACAATACTCCATGCCCAACACTTTTTGTGGCTAATTTGGGGCCAACTTGTACGGAGCAAGAGCTAATTCAAGTATTTTCGAGGTGCCCTGGGTTTATAAAATTGAAGATGCAGAGCACATATGGGGCTCCAGTTGCATTTGTTGATTTTCAGGATACTGCTGGCTCAACTGGCGCACTGGGTCATCTGCAGGGCACAATTCTCTACTCGTCAACATCTGGAGAGGGCATGAGATTAGAGTTTGCCAAATCACGAATGGGAATGCGGAAGAAGCCGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

334

Amino Acids

36.44

Weight (kDa)

7.78

Isoelectric Point (pI)

57.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 79 - 142 1.3e-11 RNA recognition motif
RRM_1 PF00076 249 - 312 2.2e-08 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 821
AarI CACCTGC 1 cut(s) 557
Acc36I ACCTGC 1 cut(s) 557
AccB1I GGYRCC 1 cut(s) 807
AccB7I CCANNNNNTGG 2 cut(s) 139, 644
AccI GTMKAC 1 cut(s) 440
AccII CGCG 3 cut(s) 191, 294, 362
AccIII TCCGGA 1 cut(s) 228
AclWI GGATC 1 cut(s) 554
AcoI YGGCCR 2 cut(s) 12, 243
AcuI CTGAAG 2 cut(s) 637, 687
AfaI GTAC 1 cut(s) 775
AfeI AGCGCT 1 cut(s) 485
AfiI CCNNNNNNNGG 5 cut(s) 44, 139, 241, 596, 644
AgsI TTSAA 3 cut(s) 546, 794, 829
AjnI CCWGG 5 cut(s) 43, 94, 207, 589, 811
AluBI AGCT 3 cut(s) 527, 651, 787
AluI AGCT 3 cut(s) 527, 651, 787
Alw21I GWGCWC 1 cut(s) 842
AlwI GGATC 1 cut(s) 554
Aor13HI TCCGGA 1 cut(s) 228
Aor51HI AGCGCT 1 cut(s) 485
AoxI GGCC 8 cut(s) 12, 97, 105, 210, 243, 247, 549, 764
ApeKI GCWGC 5 cut(s) 121, 124, 127, 576, 648
AspLEI GCGC 3 cut(s) 193, 486, 899
AspS9I GGNCC 8 cut(s) 98, 106, 226, 231, 373, 477, 549, 764
AsuC2I CCSGG 1 cut(s) 303
AsuHPI GGTGA 1 cut(s) 311
AvaII GGWCC 4 cut(s) 226, 231, 373, 477
BaeGI GKGCMC 2 cut(s) 812, 920
BanI GGYRCC 1 cut(s) 807
BanII GRGCYC 1 cut(s) 853
Bbv12I GWGCWC 1 cut(s) 842
BbvCI CCTCAGC 1 cut(s) 171
BbvI GCAGC 5 cut(s) 133, 136, 139, 588, 660
BccI CCATC 3 cut(s) 4, 409, 637
BciT130I CCWGG 5 cut(s) 45, 96, 209, 591, 813
BciVI GTATCC 1 cut(s) 871
BcnI CCSGG 1 cut(s) 303
BfaI CTAG 3 cut(s) 458, 474, 528
BfmI CTRYAG 2 cut(s) 564, 911
BfoI RGCGCY 1 cut(s) 487
BfuAI ACCTGC 1 cut(s) 557
BfuI GTATCC 1 cut(s) 871
BglII AGATCT 2 cut(s) 454, 506
Bme1390I CCNGG 6 cut(s) 45, 96, 209, 303, 591, 813
Bme18I GGWCC 4 cut(s) 226, 231, 373, 477
BmgT120I GGNCC 8 cut(s) 98, 106, 226, 231, 373, 477, 549, 764
BmiI GGNNCC 7 cut(s) 49, 100, 108, 233, 765, 809, 852
BmrFI CCNGG 6 cut(s) 45, 96, 209, 303, 591, 813
BmrI ACTGGG 1 cut(s) 911
BmsI GCATC 1 cut(s) 822
BmuI ACTGGG 1 cut(s) 911
BpmI CTGGAG 2 cut(s) 837, 963
Bpu10I CCTNAGC 1 cut(s) 171
BpuEI CTTGAG 2 cut(s) 449, 472
BpuMI CCSGG 1 cut(s) 303
BsaJI CCNNGG 4 cut(s) 102, 207, 811, 812
BsaWI WCCGGW 1 cut(s) 228
Bsc4I CCNNNNNNNGG 5 cut(s) 44, 139, 241, 596, 644
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 3 cut(s) 854, 898, 906
Bse3DI GCAATG 1 cut(s) 402
BseAI TCCGGA 1 cut(s) 228
BseBI CCWGG 5 cut(s) 45, 96, 209, 591, 813
BseDI CCNNGG 4 cut(s) 102, 207, 811, 812
BseGI GGATG 1 cut(s) 420
BseLI CCNNNNNNNGG 5 cut(s) 44, 139, 241, 596, 644
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 2 cut(s) 185, 359
BseNI ACTGG 3 cut(s) 854, 898, 906
BseSI GKGCMC 2 cut(s) 812, 920
BseXI GCAGC 5 cut(s) 133, 136, 139, 588, 660
BseYI CCCAGC 1 cut(s) 165
BsgI GTGCAG 1 cut(s) 618
Bsh1236I CGCG 3 cut(s) 191, 294, 362
Bsh1285I CGRYCG 1 cut(s) 390
BshFI GGCC 8 cut(s) 14, 99, 107, 212, 245, 249, 551, 766
BshNI GGYRCC 1 cut(s) 807
BsiEI CGRYCG 1 cut(s) 390
BsiHKAI GWGCWC 1 cut(s) 842
BsiSI CCGG 3 cut(s) 229, 246, 302
BslI CCNNNNNNNGG 5 cut(s) 44, 139, 241, 596, 644
BsmI GAATGC 2 cut(s) 579, 990
BsnI GGCC 8 cut(s) 14, 99, 107, 212, 245, 249, 551, 766
Bsp1286I GDGCHC 4 cut(s) 812, 842, 853, 920
Bsp13I TCCGGA 1 cut(s) 228
Bsp143I GATC 5 cut(s) 387, 424, 454, 506, 559
BspANI GGCC 8 cut(s) 14, 99, 107, 212, 245, 249, 551, 766
BspCNI CTCAG 2 cut(s) 184, 358
BspEI TCCGGA 1 cut(s) 228
BspFNI CGCG 3 cut(s) 191, 294, 362
BspLI GGNNCC 7 cut(s) 49, 100, 108, 233, 765, 809, 852
BspMAI CTGCAG 2 cut(s) 568, 915
BspMI ACCTGC 1 cut(s) 557
BspPI GGATC 1 cut(s) 554
BspT107I GGYRCC 1 cut(s) 807
BsrDI GCAATG 1 cut(s) 402
BsrFI RCCGGY 1 cut(s) 245
BsrI ACTGG 3 cut(s) 854, 898, 906
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 4 cut(s) 102, 207, 811, 812
BssMI GATC 5 cut(s) 387, 424, 454, 506, 559
Bst2UI CCWGG 5 cut(s) 45, 96, 209, 591, 813
Bst6I CTCTTC 2 cut(s) 242, 293
BstC8I GCNNGC 3 cut(s) 247, 402, 886
BstDEI CTNAG 2 cut(s) 171, 345
BstDSI CCRYGG 1 cut(s) 102
BstF5I GGATG 1 cut(s) 420
BstFNI CGCG 3 cut(s) 191, 294, 362
BstH2I RGCGCY 1 cut(s) 487
BstHHI GCGC 3 cut(s) 193, 486, 899
BstKTI GATC 5 cut(s) 390, 427, 457, 509, 562
BstMBI GATC 5 cut(s) 387, 424, 454, 506, 559
BstMCI CGRYCG 1 cut(s) 390
BstNI CCWGG 5 cut(s) 45, 96, 209, 591, 813
BstNSI RCATGY 1 cut(s) 589
BstSCI CCNGG 6 cut(s) 43, 94, 207, 301, 589, 811
BstSFI CTRYAG 2 cut(s) 564, 911
BstSLI GKGCMC 2 cut(s) 812, 920
BstUI CGCG 3 cut(s) 191, 294, 362
BstV1I GCAGC 5 cut(s) 133, 136, 139, 588, 660
BstX2I RGATCY 2 cut(s) 454, 506
BstYI RGATCY 2 cut(s) 454, 506
BsuI GTATCC 1 cut(s) 871
BsuRI GGCC 8 cut(s) 14, 99, 107, 212, 245, 249, 551, 766
BtgI CCRYGG 1 cut(s) 102
BtsCI GGATG 1 cut(s) 420
BtsI GCAGTG 1 cut(s) 667
BtsIMutI CAGTG 4 cut(s) 404, 661, 667, 899
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 3 cut(s) 247, 402, 886
CfoI GCGC 3 cut(s) 193, 486, 899
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 8 cut(s) 98, 106, 226, 231, 373, 477, 549, 764
Csp6I GTAC 1 cut(s) 774
CviAII CATG 6 cut(s) 586, 616, 644, 691, 735, 952
CviQI GTAC 1 cut(s) 774
DdeI CTNAG 2 cut(s) 171, 345
DpnI GATC 5 cut(s) 389, 426, 456, 508, 561
DpnII GATC 5 cut(s) 387, 424, 454, 506, 559
EaeI YGGCCR 2 cut(s) 12, 243
Eam1104I CTCTTC 2 cut(s) 242, 293
EarI CTCTTC 2 cut(s) 242, 293
EciI GGCGGA 2 cut(s) 27, 102
Eco24I GRGCYC 1 cut(s) 853
Eco47I GGWCC 4 cut(s) 226, 231, 373, 477
Eco47III AGCGCT 1 cut(s) 485
Eco57I CTGAAG 2 cut(s) 637, 687
EcoRII CCWGG 5 cut(s) 43, 94, 207, 589, 811
EcoT38I GRGCYC 1 cut(s) 853
FaeI CATG 6 cut(s) 589, 619, 647, 694, 738, 955
FalI AAGNNNNNCTT 2 cut(s) 538, 570
FatI CATG 6 cut(s) 585, 615, 643, 690, 734, 951
FauNDI CATATG 1 cut(s) 844
FblI GTMKAC 1 cut(s) 440
FokI GGATG 1 cut(s) 427
FriOI GRGCYC 1 cut(s) 853
FseI GGCCGGCC 1 cut(s) 249
FspBI CTAG 3 cut(s) 458, 474, 528
GlaI GCGC 3 cut(s) 192, 485, 898
GsaI CCCAGC 1 cut(s) 169
GsuI CTGGAG 2 cut(s) 837, 963
HaeII RGCGCY 1 cut(s) 487
HaeIII GGCC 8 cut(s) 14, 99, 107, 212, 245, 249, 551, 766
HapII CCGG 3 cut(s) 229, 246, 302
HhaI GCGC 3 cut(s) 193, 486, 899
Hin1II CATG 6 cut(s) 589, 619, 647, 694, 738, 955
Hin6I GCGC 3 cut(s) 191, 484, 897
HinP1I GCGC 3 cut(s) 191, 484, 897
HincII GTYRAC 2 cut(s) 441, 936
HindII GTYRAC 2 cut(s) 441, 936
HinfI GANTC 1 cut(s) 311
HpaII CCGG 3 cut(s) 229, 246, 302
HphI GGTGA 1 cut(s) 311
Hpy166II GTNNAC 4 cut(s) 55, 441, 670, 936
Hpy188I TCNGA 4 cut(s) 326, 392, 517, 559
Hpy188III TCNNGA 6 cut(s) 229, 428, 489, 875, 942, 975
Hpy8I GTNNAC 4 cut(s) 55, 441, 670, 936
Hpy99I CGWCG 2 cut(s) 206, 224
HpyAV CCTTC 1 cut(s) 427
HpyCH4V TGCA 6 cut(s) 400, 566, 635, 835, 860, 913
HpyF3I CTNAG 2 cut(s) 171, 345
Hsp92II CATG 6 cut(s) 589, 619, 647, 694, 738, 955
HspAI GCGC 3 cut(s) 191, 484, 897
Kpn2I TCCGGA 1 cut(s) 228
KroI GCCGGC 1 cut(s) 245
KroNI GCCGGC 1 cut(s) 247
Kzo9I GATC 5 cut(s) 387, 424, 454, 506, 559
LmnI GCTCC 5 cut(s) 53, 187, 392, 778, 856
Lsp1109I GCAGC 5 cut(s) 133, 136, 139, 588, 660
LweI GCATC 1 cut(s) 822
MaeI CTAG 3 cut(s) 458, 474, 528
MaeIII GTNAC 1 cut(s) 305
MalI GATC 5 cut(s) 389, 426, 456, 508, 561
MboI GATC 5 cut(s) 387, 424, 454, 506, 559
MboII GAAGA 6 cut(s) 229, 269, 280, 693, 841, 1003
MflI RGATCY 2 cut(s) 454, 506
MhlI GDGCHC 4 cut(s) 812, 842, 853, 920
MluCI AATT 6 cut(s) 469, 601, 757, 789, 824, 921
MlyI GAGTC 1 cut(s) 320
MroI TCCGGA 1 cut(s) 228
MroNI GCCGGC 1 cut(s) 245
MslI CAYNNNNRTG 1 cut(s) 584
MspI CCGG 3 cut(s) 229, 246, 302
MspR9I CCNGG 6 cut(s) 45, 96, 209, 303, 591, 813
Mva1269I GAATGC 2 cut(s) 579, 990
MvaI CCWGG 5 cut(s) 45, 96, 209, 591, 813
MvnI CGCG 3 cut(s) 191, 294, 362
NaeI GCCGGC 1 cut(s) 247
NciI CCSGG 1 cut(s) 303
NdeI CATATG 1 cut(s) 844
NdeII GATC 5 cut(s) 387, 424, 454, 506, 559
NgoMIV GCCGGC 1 cut(s) 245
NlaIII CATG 6 cut(s) 589, 619, 647, 694, 738, 955
NlaIV GGNNCC 7 cut(s) 49, 100, 108, 233, 765, 809, 852
NspI RCATGY 1 cut(s) 589
PaqCI CACCTGC 1 cut(s) 557
PasI CCCWGGG 1 cut(s) 812
PctI GAATGC 2 cut(s) 579, 990
PdiI GCCGGC 1 cut(s) 247
PflFI GACNNNGTC 1 cut(s) 224
PflMI CCANNNNNTGG 2 cut(s) 139, 644
Ple19I CGATCG 1 cut(s) 390
PleI GAGTC 1 cut(s) 319
PpsI GAGTC 1 cut(s) 319
PsiI TTATAA 1 cut(s) 821
Psp6I CCWGG 5 cut(s) 43, 94, 207, 589, 811
PspFI CCCAGC 1 cut(s) 165
PspGI CCWGG 5 cut(s) 43, 94, 207, 589, 811
PspN4I GGNNCC 7 cut(s) 49, 100, 108, 233, 765, 809, 852
PspPI GGNCC 8 cut(s) 98, 106, 226, 231, 373, 477, 549, 764
PstI CTGCAG 2 cut(s) 568, 915
PsuI RGATCY 2 cut(s) 454, 506
PsyI GACNNNGTC 1 cut(s) 224
PvuI CGATCG 1 cut(s) 390
RigI GGCCGGCC 1 cut(s) 249
RsaI GTAC 1 cut(s) 775
RsaNI GTAC 1 cut(s) 774
RseI CAYNNNNRTG 1 cut(s) 584
SalI GTCGAC 1 cut(s) 439
Sau3AI GATC 5 cut(s) 387, 424, 454, 506, 559
Sau96I GGNCC 8 cut(s) 98, 106, 226, 231, 373, 477, 549, 764
SbfI CCTGCAGG 1 cut(s) 568
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 6 cut(s) 45, 96, 209, 303, 591, 813
SdaI CCTGCAGG 1 cut(s) 568
SduI GDGCHC 4 cut(s) 812, 842, 853, 920
SfaNI GCATC 1 cut(s) 822
SfcI CTRYAG 2 cut(s) 564, 911
SinI GGWCC 4 cut(s) 226, 231, 373, 477
SmiMI CAYNNNNRTG 1 cut(s) 584
SmlI CTYRAG 2 cut(s) 428, 487
SmoI CTYRAG 2 cut(s) 428, 487
Sse8387I CCTGCAGG 1 cut(s) 568
Sse9I AATT 6 cut(s) 469, 601, 757, 789, 824, 921
SspMI CTAG 3 cut(s) 458, 474, 528
StyD4I CCNGG 6 cut(s) 43, 94, 207, 301, 589, 811
TaqI TCGA 2 cut(s) 440, 803
TasI AATT 6 cut(s) 469, 601, 757, 789, 824, 921
TauI GCSGC 5 cut(s) 17, 118, 121, 196, 215
TscAI CASTG 4 cut(s) 411, 661, 667, 906
TseI GCWGC 5 cut(s) 121, 124, 127, 576, 648
TspDTI ATGAA 4 cut(s) 134, 516, 525, 707
TspGWI ACGGA 2 cut(s) 40, 791
TspRI CASTG 4 cut(s) 411, 661, 667, 906
Tth111I GACNNNGTC 1 cut(s) 224
Van91I CCANNNNNTGG 2 cut(s) 139, 644
VpaK11BI GGWCC 4 cut(s) 226, 231, 373, 477
XceI RCATGY 1 cut(s) 589
XcmI CCANNNNNNNNNTGG 1 cut(s) 976
XmiI GTMKAC 1 cut(s) 440
XspI CTAG 3 cut(s) 458, 474, 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.