Rmu_sc0014688.1_g000002

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014688.1
OG0000169
Physical Location & Seq
Forward (+)
4068 .. 5333
1266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014688.1_g000002.1.cds

Sequence Viewer

Length: 1077 bp
atggcttccattgatgctgtcacagcgagcttttctgtctccctggctctcgctgagggcggtagtgcccctgatatggggaaaattggtggtggtcttgcgcgcaggtcatcccaatcctttcttcttggcaaaccattgacccgaaaacaggttgatccgaaggctttcaaaactcacttccaccgaacttggatggtggacaaggaattcaggatccaggagagggctggggatatgttcctattctctttcgaatctgttcgagatcgaaacaaagttttacgaggaggagtctgggtttctggaataccacctctttttgaagagcctgtgaatctcacactgctaattgggaacctcctcggggcttttttggattatgataagaaggagttcaagaaaggctcgattaggtttttattctctcatgatgtgtccaagccgatcttgcttgaacgaagagtttatttggatgttggggtcgaaccgtttcttcagtttcaatttgaacatttgaaggggagatgctctcagtgtggacttgtcactcatgccagaatttcttgtgcagaaccgtgtatggcaaaccctactcctagggttttgcattttcctagaccattagtatctggaggttcgttctctttctcggcaaaggaaaaaaatgatctattcactgcctcttcttccatccctttgaagaggaaaccagttattcgtcgattggagcggccaatttcctctacttctccttcgatcccaactgcggattttgatgtgactgatgcttctttggagcacaagttggagaaggatcggagtccaacactaaaacctcccatagagacttgtgatttggatggttctgcaggtggaaaggttccaaccctacatgttaatgcattgggactgattgaagatgacagtgatgttgctttggtaactctgaagaagaagaccagcaagcctcttggcagcaagaataagaatcagcgcactagtaagaagactaatggtagtcttctgaagctcacctatcctacaaccactggttcgatctgcttccagccctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03018 map03013 map03015 map03018
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 RVT_3 zf-CCHC_4

Protein Analysis

358

Amino Acids

39.42

Weight (kDa)

9.58

Isoelectric Point (pI)

35.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 863
Acc36I ACCTGC 2 cut(s) 96, 863
AccBSI CCGCTC 1 cut(s) 733
AccII CGCG 1 cut(s) 103
AciI CCGC 3 cut(s) 60, 733, 770
AclWI GGATC 5 cut(s) 152, 211, 224, 754, 825
AcoI YGGCCR 1 cut(s) 734
AcsI RAATTY 2 cut(s) 209, 561
AcuI CTGAAG 3 cut(s) 482, 971, 1049
AfiI CCNNNNNNNGG 6 cut(s) 76, 77, 151, 226, 367, 769
AflIII ACRYGT 1 cut(s) 895
AgsI TTSAA 9 cut(s) 172, 326, 400, 458, 506, 512, 520, 703, 920
AhlI ACTAGT 1 cut(s) 1001
AjnI CCWGG 2 cut(s) 42, 219
AjuI GAANNNNNNNTTGG 2 cut(s) 108, 140
AluBI AGCT 2 cut(s) 30, 1033
AluI AGCT 2 cut(s) 30, 1033
Alw21I GWGCWC 1 cut(s) 804
Alw26I GTCTC 2 cut(s) 43, 842
AlwI GGATC 5 cut(s) 152, 211, 224, 754, 825
Ama87I CYCGRG 1 cut(s) 365
AoxI GGCC 1 cut(s) 734
ApeKI GCWGC 1 cut(s) 978
ApoI RAATTY 2 cut(s) 209, 561
ArsI GACNNNNNNTTYG 2 cut(s) 841, 873
Asp700I GAANNNNTTC 4 cut(s) 167, 261, 395, 492
AspA2I CCTAGG 1 cut(s) 599
AspLEI GCGC 3 cut(s) 103, 105, 999
AsuHPI GGTGA 1 cut(s) 1027
AsuII TTCGAA 1 cut(s) 255
AvaI CYCGRG 1 cut(s) 365
AvrII CCTAGG 1 cut(s) 599
BaeGI GKGCMC 1 cut(s) 70
BamHI GGATCC 1 cut(s) 216
BbsI GAAGAC 3 cut(s) 965, 1016, 1016
Bbv12I GWGCWC 1 cut(s) 804
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 1 cut(s) 990
BccI CCATC 3 cut(s) 190, 701, 857
BciT130I CCWGG 2 cut(s) 44, 221
BcoDI GTCTC 2 cut(s) 43, 842
BcuI ACTAGT 1 cut(s) 1001
BfaI CTAG 4 cut(s) 600, 618, 1002, 1075
BfmI CTRYAG 1 cut(s) 870
BfuAI ACCTGC 2 cut(s) 96, 863
BisI GCNGC 2 cut(s) 734, 979
BlnI CCTAGG 1 cut(s) 599
BlsI GCNGC 2 cut(s) 735, 980
Bme1390I CCNGG 2 cut(s) 44, 221
BmeT110I CYCGRG 1 cut(s) 365
BmiI GGNNCC 3 cut(s) 218, 359, 885
BmrFI CCNGG 2 cut(s) 44, 221
BmsI GCATC 3 cut(s) 4, 518, 778
BpiI GAAGAC 3 cut(s) 965, 1016, 1016
BplI GAGNNNNNCTC 2 cut(s) 517, 549
BpmI CTGGAG 1 cut(s) 654
Bpu10I CCTNAGC 1 cut(s) 54
Bpu14I TTCGAA 1 cut(s) 255
BsaJI CCNNGG 3 cut(s) 42, 364, 599
BsaXI ACNNNNNCTCC 4 cut(s) 285, 315, 791, 821
Bsc4I CCNNNNNNNGG 6 cut(s) 76, 77, 151, 226, 367, 769
Bse1I ACTGG 2 cut(s) 713, 1057
BseBI CCWGG 2 cut(s) 44, 221
BseDI CCNNGG 3 cut(s) 42, 364, 599
BseGI GGATG 5 cut(s) 110, 201, 481, 693, 868
BseLI CCNNNNNNNGG 6 cut(s) 76, 77, 151, 226, 367, 769
BseMII CTCAG 2 cut(s) 45, 548
BseNI ACTGG 2 cut(s) 713, 1057
BsePI GCGCGC 1 cut(s) 101
BseRI GAGGAG 3 cut(s) 303, 306, 353
BseSI GKGCMC 1 cut(s) 70
BseXI GCAGC 1 cut(s) 990
BseYI CCCAGC 1 cut(s) 230
BsgI GTGCAG 1 cut(s) 591
Bsh1236I CGCG 1 cut(s) 103
BshFI GGCC 1 cut(s) 736
BsiHKAI GWGCWC 1 cut(s) 804
BsiHKCI CYCGRG 1 cut(s) 365
BslFI GGGAC 1 cut(s) 924
BslI CCNNNNNNNGG 6 cut(s) 76, 77, 151, 226, 367, 769
BsmAI GTCTC 2 cut(s) 43, 842
BsmFI GGGAC 1 cut(s) 924
BsnI GGCC 1 cut(s) 736
BsoBI CYCGRG 1 cut(s) 365
Bsp119I TTCGAA 1 cut(s) 255
Bsp1286I GDGCHC 2 cut(s) 70, 804
Bsp143I GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
BspACI CCGC 3 cut(s) 60, 733, 770
BspANI GGCC 1 cut(s) 736
BspCNI CTCAG 2 cut(s) 46, 547
BspFNI CGCG 1 cut(s) 103
BspHI TCATGA 1 cut(s) 430
BspLI GGNNCC 3 cut(s) 218, 359, 885
BspMAI CTGCAG 1 cut(s) 874
BspMI ACCTGC 2 cut(s) 96, 863
BspPI GGATC 5 cut(s) 152, 211, 224, 754, 825
BspQI GCTCTTC 1 cut(s) 321
BspT104I TTCGAA 1 cut(s) 255
BsrBI CCGCTC 1 cut(s) 733
BsrI ACTGG 2 cut(s) 713, 1057
BssECI CCNNGG 3 cut(s) 42, 364, 599
BssHII GCGCGC 1 cut(s) 101
BssMI GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
BssT1I CCWWGG 1 cut(s) 599
Bst2UI CCWGG 2 cut(s) 44, 221
Bst4CI ACNGT 3 cut(s) 492, 579, 929
Bst6I CTCTTC 4 cut(s) 321, 457, 691, 698
BstBI TTCGAA 1 cut(s) 255
BstC8I GCNNGC 3 cut(s) 28, 103, 968
BstDEI CTNAG 2 cut(s) 54, 534
BstF5I GGATG 5 cut(s) 110, 201, 481, 693, 868
BstFNI CGCG 1 cut(s) 103
BstHHI GCGC 3 cut(s) 103, 105, 999
BstKTI GATC 8 cut(s) 160, 219, 271, 450, 673, 762, 820, 1062
BstMAI GTCTC 2 cut(s) 43, 842
BstMBI GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
BstMWI GCNNNNNNNGC 2 cut(s) 23, 451
BstNI CCWGG 2 cut(s) 44, 221
BstNSI RCATGY 1 cut(s) 899
BstSCI CCNGG 2 cut(s) 42, 219
BstSFI CTRYAG 1 cut(s) 870
BstSLI GKGCMC 1 cut(s) 70
BstUI CGCG 1 cut(s) 103
BstV1I GCAGC 1 cut(s) 990
BstV2I GAAGAC 3 cut(s) 965, 1016, 1016
BstX2I RGATCY 1 cut(s) 216
BstYI RGATCY 1 cut(s) 216
BsuRI GGCC 1 cut(s) 736
BtsCI GGATG 5 cut(s) 110, 201, 481, 693, 868
BtsI GCAGTG 2 cut(s) 344, 678
BtsIMutI CAGTG 5 cut(s) 344, 542, 678, 934, 1050
BveI ACCTGC 2 cut(s) 96, 863
Cac8I GCNNGC 3 cut(s) 28, 103, 968
CciI TCATGA 1 cut(s) 430
CfoI GCGC 3 cut(s) 103, 105, 999
CspCI CAANNNNNGTGG 2 cut(s) 173, 208
CviAII CATG 3 cut(s) 431, 554, 896
DdeI CTNAG 2 cut(s) 54, 534
DpnI GATC 8 cut(s) 159, 218, 270, 449, 672, 761, 819, 1061
DpnII GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
EaeI YGGCCR 1 cut(s) 734
Eam1104I CTCTTC 4 cut(s) 321, 457, 691, 698
EarI CTCTTC 4 cut(s) 321, 457, 691, 698
Eco130I CCWWGG 1 cut(s) 599
Eco57I CTGAAG 3 cut(s) 482, 971, 1049
Eco88I CYCGRG 1 cut(s) 365
EcoRI GAATTC 1 cut(s) 209
EcoRII CCWGG 2 cut(s) 42, 219
EcoT14I CCWWGG 1 cut(s) 599
EcoT22I ATGCAT 1 cut(s) 907
ErhI CCWWGG 1 cut(s) 599
FaeI CATG 3 cut(s) 434, 557, 899
FaiI YATR 8 cut(s) 77, 239, 384, 432, 555, 584, 845, 897
FalI AAGNNNNNCTT 2 cut(s) 434, 466
FaqI GGGAC 1 cut(s) 924
FatI CATG 3 cut(s) 430, 553, 895
Fnu4HI GCNGC 2 cut(s) 734, 979
FokI GGATG 5 cut(s) 97, 208, 488, 680, 875
Fsp4HI GCNGC 2 cut(s) 734, 979
FspBI CTAG 4 cut(s) 600, 618, 1002, 1075
GlaI GCGC 3 cut(s) 102, 104, 998
GluI GCNGC 2 cut(s) 734, 979
GsaI CCCAGC 1 cut(s) 234
GsuI CTGGAG 1 cut(s) 654
HaeIII GGCC 1 cut(s) 736
HhaI GCGC 3 cut(s) 103, 105, 999
Hin1II CATG 3 cut(s) 434, 557, 899
Hin6I GCGC 3 cut(s) 101, 103, 997
HinP1I GCGC 3 cut(s) 101, 103, 997
HinfI GANTC 5 cut(s) 257, 294, 337, 823, 991
HphI GGTGA 1 cut(s) 1027
Hpy166II GTNNAC 2 cut(s) 202, 542
Hpy188I TCNGA 4 cut(s) 162, 822, 951, 1029
Hpy188III TCNNGA 6 cut(s) 214, 266, 306, 400, 431, 633
Hpy8I GTNNAC 2 cut(s) 202, 542
Hpy99I CGWCG 1 cut(s) 726
HpyAV CCTTC 5 cut(s) 157, 385, 514, 765, 808
HpyCH4III ACNGT 3 cut(s) 492, 579, 929
HpyCH4V TGCA 4 cut(s) 572, 610, 872, 905
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 451
HpyF3I CTNAG 2 cut(s) 54, 534
Hsp92II CATG 3 cut(s) 434, 557, 899
HspAI GCGC 3 cut(s) 101, 103, 997
Kzo9I GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
LguI GCTCTTC 1 cut(s) 321
LmnI GCTCC 2 cut(s) 730, 799
Lsp1109I GCAGC 1 cut(s) 990
LweI GCATC 3 cut(s) 4, 518, 778
MaeI CTAG 4 cut(s) 600, 618, 1002, 1075
MaeIII GTNAC 4 cut(s) 19, 547, 781, 943
MalI GATC 8 cut(s) 159, 218, 270, 449, 672, 761, 819, 1061
MbiI CCGCTC 1 cut(s) 733
MboI GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
MflI RGATCY 1 cut(s) 216
MhlI GDGCHC 2 cut(s) 70, 804
MluCI AATT 6 cut(s) 84, 209, 351, 506, 561, 738
MlyI GAGTC 2 cut(s) 303, 832
MmeI TCCRAC 3 cut(s) 789, 851, 911
Mph1103I ATGCAT 1 cut(s) 907
MroXI GAANNNNTTC 4 cut(s) 167, 261, 395, 492
MseI TTAA 1 cut(s) 900
MslI CAYNNNNRTG 1 cut(s) 900
MspR9I CCNGG 2 cut(s) 44, 221
MvaI CCWGG 2 cut(s) 44, 221
MvnI CGCG 1 cut(s) 103
MwoI GCNNNNNNNGC 2 cut(s) 23, 451
NdeII GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
NlaIII CATG 3 cut(s) 434, 557, 899
NlaIV GGNNCC 3 cut(s) 218, 359, 885
NmeAIII GCCGAG 1 cut(s) 632
NmuCI GTSAC 3 cut(s) 19, 547, 781
NsiI ATGCAT 1 cut(s) 907
NspI RCATGY 1 cut(s) 899
NspV TTCGAA 1 cut(s) 255
PagI TCATGA 1 cut(s) 430
PaqCI CACCTGC 1 cut(s) 863
PauI GCGCGC 1 cut(s) 101
PciI ACATGT 1 cut(s) 895
PciSI GCTCTTC 1 cut(s) 321
PdmI GAANNNNTTC 4 cut(s) 167, 261, 395, 492
PfeI GAWTC 3 cut(s) 257, 337, 991
PfoI TCCNGGA 1 cut(s) 219
PkrI GCNGC 2 cut(s) 735, 980
PleI GAGTC 2 cut(s) 302, 831
PpsI GAGTC 2 cut(s) 302, 831
PscI ACATGT 1 cut(s) 895
Psp6I CCWGG 2 cut(s) 42, 219
PspFI CCCAGC 1 cut(s) 230
PspGI CCWGG 2 cut(s) 42, 219
PspN4I GGNNCC 3 cut(s) 218, 359, 885
PstI CTGCAG 1 cut(s) 874
PsuI RGATCY 1 cut(s) 216
PteI GCGCGC 1 cut(s) 101
RseI CAYNNNNRTG 1 cut(s) 900
SapI GCTCTTC 1 cut(s) 321
SaqAI TTAA 1 cut(s) 900
SatI GCNGC 2 cut(s) 734, 979
Sau3AI GATC 8 cut(s) 157, 216, 268, 447, 670, 759, 817, 1059
SchI GAGTC 2 cut(s) 303, 832
ScrFI CCNGG 2 cut(s) 44, 221
SduI GDGCHC 2 cut(s) 70, 804
SfaNI GCATC 3 cut(s) 4, 518, 778
SfcI CTRYAG 1 cut(s) 870
SfuI TTCGAA 1 cut(s) 255
SmiMI CAYNNNNRTG 1 cut(s) 900
SpeI ACTAGT 1 cut(s) 1001
Sse9I AATT 6 cut(s) 84, 209, 351, 506, 561, 738
SsiI CCGC 3 cut(s) 60, 733, 770
SspMI CTAG 4 cut(s) 600, 618, 1002, 1075
StyD4I CCNGG 2 cut(s) 42, 219
StyI CCWWGG 1 cut(s) 599
TaaI ACNGT 3 cut(s) 492, 579, 929
TaqI TCGA 8 cut(s) 255, 265, 271, 410, 486, 724, 758, 1058
TasI AATT 6 cut(s) 84, 209, 351, 506, 561, 738
TauI GCSGC 1 cut(s) 736
TfiI GAWTC 3 cut(s) 257, 337, 991
Tru1I TTAA 1 cut(s) 900
Tru9I TTAA 1 cut(s) 900
TscAI CASTG 5 cut(s) 351, 542, 685, 934, 1057
TseFI GTSAC 3 cut(s) 19, 547, 781
TseI GCWGC 1 cut(s) 978
Tsp45I GTSAC 3 cut(s) 19, 547, 781
TspRI CASTG 5 cut(s) 351, 542, 685, 934, 1057
XapI RAATTY 2 cut(s) 209, 561
XceI RCATGY 1 cut(s) 899
XcmI CCANNNNNNNNNTGG 1 cut(s) 227
XmaJI CCTAGG 1 cut(s) 599
XmnI GAANNNNTTC 4 cut(s) 167, 261, 395, 492
XspI CTAG 4 cut(s) 600, 618, 1002, 1075
Zsp2I ATGCAT 1 cut(s) 907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.