Rmu_sc0008131.1_g000008

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008131.1
OG0000169
Physical Location & Seq
Reverse (-)
22378 .. 23679
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008131.1_g000008.1.cds

Sequence Viewer

Length: 1302 bp
atggctacaatagacgctgtcactgccagttttgctgcctctctggcgctggctgaagggggtaaagccccagatttgggaaagattggaggaggtccggttcgtcgctctgctcaatcttttcttctcgggaaaccactcactcggaaaccggtggactccaactccttcaaatcccggttcttccggacctggatggtggagaaggacttccgcatccaagaaaaggcggacaacatgttcctcttctcctttgatctgatcagggatcggaacaaggtgcttaagggtggtgtttggtgctatgaccgggctctggtctgtctggaggagtatgatggtatcaccctcatcgctgatatccctctgaagtatgtaaggacatggattagggtttcgggtatccctcctctctacgaggaacccgacaacctcattctcattggaaaccttctgggcggctatttggattatgataagagagaatttcgcaaaggtgttgtgcgcatcttcttcaaacatgatatttggaagccagttcttctagagcgtagggttttcatggcccctggtgtagagccctttcttcagttccaattcaaacatcttaagggtagatgtcctcagtgtggtatgatcacgcattctggggcgaagtgtgaggaggctgtggctctttctgatcctagggttgtgaattttggtggcggcccttcttccttgggcggctcttttgctttctctgccaagaatcgccgtgagttacctatgccttcttcctccttgctgaaaaagaagaagccagttattcgacgtctagagcgttccaccattgaacctatggatcctgaaggtaccgtgcccaacacgacagatttggaaggcatggatcatgagggtgctttgccagacatggctactgaggtgtcttcggtggaaccttctgattcaggaacaaaggatcttccaccggcctacaccatgcaagttggtcggaagcaaactttgacctataagaaaagaggtcgtcaagagacagctgatccctctactaagaaattcaaaactcttttgggtggcaagcttctcactctgcatgcggaagctcttggtttgactgaagttgaggatgatgttgcgcttgtgacaatgaagaagaagttgggcagactgcttggtaggaaaaacaagggctcccgacctcacaagaagatggttttgacccctttgcgtcttacctacccggctgctactactactcaggagattggccctaaagctaagggcaaggggaaactctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

433

Amino Acids

48.07

Weight (kDa)

9.7

Isoelectric Point (pI)

40.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 817
Acc16I TGCGCA 1 cut(s) 506
Acc65I GGTACC 1 cut(s) 854
AccB1I GGYRCC 1 cut(s) 854
AccIII TCCGGA 1 cut(s) 186
AciI CCGC 6 cut(s) 214, 230, 459, 708, 726, 1100
AclWI GGATC 7 cut(s) 276, 677, 839, 852, 897, 969, 1037
AcsI RAATTY 3 cut(s) 485, 697, 1058
AcuI CTGAAG 5 cut(s) 75, 389, 572, 870, 1140
AcyI GRCGYC 1 cut(s) 814
AfaI GTAC 1 cut(s) 856
AfiI CCNNNNNNNGG 5 cut(s) 76, 77, 226, 316, 629
AflII CTTAAG 2 cut(s) 284, 608
AflIII ACRYGT 1 cut(s) 237
AgeI ACCGGT 1 cut(s) 151
AgsI TTSAA 5 cut(s) 172, 517, 601, 836, 1063
AjnI CCWGG 2 cut(s) 191, 568
AjuI GAANNNNNNNTTGG 2 cut(s) 1145, 1177
AloI GAACNNNNNNTCC 4 cut(s) 84, 116, 224, 256
AluBI AGCT 4 cut(s) 1040, 1084, 1106, 1280
AluI AGCT 4 cut(s) 1040, 1084, 1106, 1280
Alw26I GTCTC 1 cut(s) 1028
AlwI GGATC 7 cut(s) 276, 677, 839, 852, 897, 969, 1037
Ama87I CYCGRG 1 cut(s) 128
Aor13HI TCCGGA 1 cut(s) 186
AoxI GGCC 4 cut(s) 564, 709, 972, 1270
ApeKI GCWGC 2 cut(s) 35, 1247
ApoI RAATTY 3 cut(s) 485, 697, 1058
AsiGI ACCGGT 1 cut(s) 151
Asp700I GAANNNNTTC 1 cut(s) 209
Asp718I GGTACC 1 cut(s) 854
AspA2I CCTAGG 1 cut(s) 686
AspLEI GCGC 3 cut(s) 49, 507, 1141
AspS9I GGNCC 5 cut(s) 95, 189, 565, 710, 1271
AsuC2I CCSGG 3 cut(s) 178, 311, 1244
AsuHPI GGTGA 1 cut(s) 337
AvaI CYCGRG 1 cut(s) 128
AvaII GGWCC 2 cut(s) 95, 189
AvrII CCTAGG 1 cut(s) 686
BaeGI GKGCMC 1 cut(s) 864
BamHI GGATCC 1 cut(s) 844
BanI GGYRCC 1 cut(s) 854
BanII GRGCYC 3 cut(s) 316, 582, 1196
BbsI GAAGAC 1 cut(s) 921
BbvI GCAGC 2 cut(s) 22, 1234
BccI CCATC 3 cut(s) 190, 332, 1207
BceAI ACGGC 1 cut(s) 741
BcgI CGANNNNNNTGC 2 cut(s) 974, 1008
BciT130I CCWGG 2 cut(s) 193, 570
BciVI GTATCC 1 cut(s) 413
BclI TGATCA 2 cut(s) 261, 636
BcnI CCSGG 3 cut(s) 178, 311, 1244
BcoDI GTCTC 1 cut(s) 1028
BfaI CTAG 3 cut(s) 545, 687, 818
BfoI RGCGCY 1 cut(s) 50
BfrI CTTAAG 2 cut(s) 284, 608
BfuI GTATCC 1 cut(s) 413
BglI GCCNNNNNGGC 1 cut(s) 44
BisI GCNGC 5 cut(s) 36, 460, 709, 727, 1248
BlnI CCTAGG 1 cut(s) 686
BlsI GCNGC 5 cut(s) 37, 461, 710, 728, 1249
Bme1390I CCNGG 5 cut(s) 178, 193, 311, 570, 1244
Bme18I GGWCC 2 cut(s) 95, 189
BmeT110I CYCGRG 1 cut(s) 128
BmgT120I GGNCC 5 cut(s) 95, 189, 565, 710, 1271
BmiI GGNNCC 6 cut(s) 423, 567, 846, 856, 939, 1195
BmrFI CCNGG 5 cut(s) 178, 193, 311, 570, 1244
BmsI GCATC 2 cut(s) 225, 516
BpiI GAAGAC 1 cut(s) 921
BpmI CTGGAG 1 cut(s) 347
Bpu10I CCTNAGC 1 cut(s) 1281
BpuMI CCSGG 3 cut(s) 178, 311, 1244
BsaHI GRCGYC 1 cut(s) 814
BsaJI CCNNGG 3 cut(s) 568, 686, 720
BsaWI WCCGGW 3 cut(s) 97, 151, 186
BsaXI ACNNNNNCTCC 6 cut(s) 84, 114, 149, 179, 1178, 1208
Bsc4I CCNNNNNNNGG 5 cut(s) 76, 77, 226, 316, 629
Bse118I RCCGGY 2 cut(s) 151, 970
Bse1I ACTGG 3 cut(s) 27, 536, 803
BseAI TCCGGA 1 cut(s) 186
BseBI CCWGG 2 cut(s) 193, 570
BseDI CCNNGG 3 cut(s) 568, 686, 720
BseGI GGATG 3 cut(s) 201, 216, 1135
BseLI CCNNNNNNNGG 5 cut(s) 76, 77, 226, 316, 629
BseMII CTCAG 3 cut(s) 638, 912, 1274
BseNI ACTGG 3 cut(s) 27, 536, 803
BseRI GAGGAG 4 cut(s) 105, 344, 399, 677
BseSI GKGCMC 1 cut(s) 864
BseXI GCAGC 2 cut(s) 22, 1234
BshFI GGCC 4 cut(s) 566, 711, 974, 1272
BshNI GGYRCC 1 cut(s) 854
BshTI ACCGGT 1 cut(s) 151
BsiHKCI CYCGRG 1 cut(s) 128
BsiSI CCGG 7 cut(s) 98, 152, 178, 187, 310, 971, 1244
BslI CCNNNNNNNGG 5 cut(s) 76, 77, 226, 316, 629
BsmAI GTCTC 1 cut(s) 1028
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 4 cut(s) 566, 711, 974, 1272
BsoBI CYCGRG 1 cut(s) 128
Bsp1286I GDGCHC 4 cut(s) 316, 582, 864, 1196
Bsp13I TCCGGA 1 cut(s) 186
Bsp143I GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
BspACI CCGC 6 cut(s) 214, 230, 459, 708, 726, 1100
BspANI GGCC 4 cut(s) 566, 711, 974, 1272
BspCNI CTCAG 3 cut(s) 637, 913, 1273
BspEI TCCGGA 1 cut(s) 186
BspHI TCATGA 1 cut(s) 892
BspLI GGNNCC 6 cut(s) 423, 567, 846, 856, 939, 1195
BspPI GGATC 7 cut(s) 276, 677, 839, 852, 897, 969, 1037
BspT107I GGYRCC 1 cut(s) 854
BspTI CTTAAG 2 cut(s) 284, 608
BsrFI RCCGGY 2 cut(s) 151, 970
BsrI ACTGG 3 cut(s) 27, 536, 803
BssAI RCCGGY 2 cut(s) 151, 970
BssECI CCNNGG 3 cut(s) 568, 686, 720
BssMI GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
BssNI GRCGYC 1 cut(s) 814
BssT1I CCWWGG 2 cut(s) 686, 720
Bst2UI CCWGG 2 cut(s) 193, 570
Bst4CI ACNGT 1 cut(s) 859
Bst6I CTCTTC 1 cut(s) 251
BstACI GRCGYC 1 cut(s) 814
BstAFI CTTAAG 2 cut(s) 284, 608
BstC8I GCNNGC 3 cut(s) 51, 1082, 1098
BstDEI CTNAG 5 cut(s) 624, 921, 1053, 1260, 1281
BstF5I GGATG 3 cut(s) 201, 216, 1135
BstH2I RGCGCY 1 cut(s) 50
BstHHI GCGC 3 cut(s) 49, 507, 1141
BstKTI GATC 9 cut(s) 259, 264, 271, 639, 685, 847, 892, 964, 1045
BstMAI GTCTC 1 cut(s) 1028
BstMBI GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
BstMWI GCNNNNNNNGC 4 cut(s) 23, 32, 44, 743
BstNI CCWGG 2 cut(s) 193, 570
BstNSI RCATGY 2 cut(s) 241, 1100
BstSCI CCNGG 5 cut(s) 176, 191, 309, 568, 1242
BstSLI GKGCMC 1 cut(s) 864
BstV1I GCAGC 2 cut(s) 22, 1234
BstV2I GAAGAC 1 cut(s) 921
BstX2I RGATCY 2 cut(s) 844, 961
BstYI RGATCY 2 cut(s) 844, 961
BsuI GTATCC 1 cut(s) 413
BsuRI GGCC 4 cut(s) 566, 711, 974, 1272
BtgZI GCGATG 1 cut(s) 337
BtsCI GGATG 3 cut(s) 201, 216, 1135
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 2 cut(s) 21, 632
Cac8I GCNNGC 3 cut(s) 51, 1082, 1098
CciI TCATGA 1 cut(s) 892
CfoI GCGC 3 cut(s) 49, 507, 1141
Cfr10I RCCGGY 2 cut(s) 151, 970
Cfr13I GGNCC 5 cut(s) 95, 189, 565, 710, 1271
CseI GACGC 2 cut(s) 23, 1220
Csp6I GTAC 1 cut(s) 855
CspAI ACCGGT 1 cut(s) 151
CviAII CATG 9 cut(s) 238, 384, 521, 562, 886, 893, 913, 982, 1097
CviQI GTAC 1 cut(s) 855
DdeI CTNAG 5 cut(s) 624, 921, 1053, 1260, 1281
DpnI GATC 9 cut(s) 258, 263, 270, 638, 684, 846, 891, 963, 1044
DpnII GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
Eam1104I CTCTTC 1 cut(s) 251
EarI CTCTTC 1 cut(s) 251
EciI GGCGGA 1 cut(s) 245
Eco130I CCWWGG 2 cut(s) 686, 720
Eco24I GRGCYC 3 cut(s) 316, 582, 1196
Eco32I GATATC 1 cut(s) 361
Eco47I GGWCC 2 cut(s) 95, 189
Eco57I CTGAAG 5 cut(s) 75, 389, 572, 870, 1140
Eco88I CYCGRG 1 cut(s) 128
EcoRII CCWGG 2 cut(s) 191, 568
EcoRV GATATC 1 cut(s) 361
EcoT14I CCWWGG 2 cut(s) 686, 720
EcoT38I GRGCYC 3 cut(s) 316, 582, 1196
ErhI CCWWGG 2 cut(s) 686, 720
FaeI CATG 9 cut(s) 241, 387, 524, 565, 889, 896, 916, 985, 1100
FatI CATG 9 cut(s) 237, 383, 520, 561, 885, 892, 912, 981, 1096
FbaI TGATCA 2 cut(s) 261, 636
Fnu4HI GCNGC 5 cut(s) 36, 460, 709, 727, 1248
FokI GGATG 3 cut(s) 203, 208, 1142
FriOI GRGCYC 3 cut(s) 316, 582, 1196
Fsp4HI GCNGC 5 cut(s) 36, 460, 709, 727, 1248
FspAI RTGCGCAY 1 cut(s) 506
FspBI CTAG 3 cut(s) 545, 687, 818
FspI TGCGCA 1 cut(s) 506
GlaI GCGC 3 cut(s) 48, 506, 1140
GluI GCNGC 5 cut(s) 36, 460, 709, 727, 1248
GsuI CTGGAG 1 cut(s) 347
HaeII RGCGCY 1 cut(s) 50
HaeIII GGCC 4 cut(s) 566, 711, 974, 1272
HapII CCGG 7 cut(s) 98, 152, 178, 187, 310, 971, 1244
HgaI GACGC 2 cut(s) 23, 1220
HhaI GCGC 3 cut(s) 49, 507, 1141
Hin1I GRCGYC 1 cut(s) 814
Hin1II CATG 9 cut(s) 241, 387, 524, 565, 889, 896, 916, 985, 1100
Hin6I GCGC 3 cut(s) 47, 505, 1139
HinP1I GCGC 3 cut(s) 47, 505, 1139
HindIII AAGCTT 1 cut(s) 1082
HinfI GANTC 3 cut(s) 158, 751, 947
HpaII CCGG 7 cut(s) 98, 152, 178, 187, 310, 971, 1244
HphI GGTGA 1 cut(s) 337
Hpy166II GTNNAC 1 cut(s) 157
Hpy188I TCNGA 7 cut(s) 147, 261, 273, 369, 682, 946, 996
Hpy8I GTNNAC 1 cut(s) 157
Hpy99I CGWCG 2 cut(s) 108, 816
HpyAV CCTTC 9 cut(s) 50, 178, 199, 461, 723, 783, 845, 875, 951
HpyCH4III ACNGT 1 cut(s) 859
HpyCH4IV ACGT 1 cut(s) 814
HpyCH4V TGCA 2 cut(s) 985, 1096
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 32, 44, 743
HpyF3I CTNAG 5 cut(s) 624, 921, 1053, 1260, 1281
HpySE526I ACGT 1 cut(s) 814
Hsp92I GRCGYC 1 cut(s) 814
Hsp92II CATG 9 cut(s) 241, 387, 524, 565, 889, 896, 916, 985, 1100
HspAI GCGC 3 cut(s) 47, 505, 1139
Kpn2I TCCGGA 1 cut(s) 186
KpnI GGTACC 1 cut(s) 858
Ksp22I TGATCA 2 cut(s) 261, 636
Kzo9I GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
LmnI GCTCC 1 cut(s) 1199
Lsp1109I GCAGC 2 cut(s) 22, 1234
LweI GCATC 2 cut(s) 225, 516
MaeI CTAG 3 cut(s) 545, 687, 818
MaeII ACGT 1 cut(s) 814
MaeIII GTNAC 3 cut(s) 19, 762, 1144
MalI GATC 9 cut(s) 258, 263, 270, 638, 684, 846, 891, 963, 1044
MboI GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
MflI RGATCY 2 cut(s) 844, 961
MhlI GDGCHC 4 cut(s) 316, 582, 864, 1196
MluCI AATT 4 cut(s) 485, 596, 697, 1058
MlyI GAGTC 1 cut(s) 152
MmeI TCCRAC 2 cut(s) 186, 974
MroI TCCGGA 1 cut(s) 186
MroXI GAANNNNTTC 1 cut(s) 209
MseI TTAA 2 cut(s) 285, 609
MslI CAYNNNNRTG 1 cut(s) 897
MspA1I CMGCKG 1 cut(s) 1040
MspCI CTTAAG 2 cut(s) 284, 608
MspI CCGG 7 cut(s) 98, 152, 178, 187, 310, 971, 1244
MspR9I CCNGG 5 cut(s) 178, 193, 311, 570, 1244
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 2 cut(s) 193, 570
MwoI GCNNNNNNNGC 4 cut(s) 23, 32, 44, 743
NciI CCSGG 3 cut(s) 178, 311, 1244
NdeII GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
NlaIII CATG 9 cut(s) 241, 387, 524, 565, 889, 896, 916, 985, 1100
NlaIV GGNNCC 6 cut(s) 423, 567, 846, 856, 939, 1195
NmuCI GTSAC 2 cut(s) 19, 1144
NsbI TGCGCA 1 cut(s) 506
NspI RCATGY 2 cut(s) 241, 1100
PaeI GCATGC 1 cut(s) 1100
PagI TCATGA 1 cut(s) 892
PciI ACATGT 1 cut(s) 237
PcsI WCGNNNNNNNCGW 2 cut(s) 423, 820
PctI GAATGC 1 cut(s) 643
PdmI GAANNNNTTC 1 cut(s) 209
PfeI GAWTC 2 cut(s) 751, 947
PflFI GACNNNGTC 1 cut(s) 17
PinAI ACCGGT 1 cut(s) 151
PkrI GCNGC 5 cut(s) 37, 461, 710, 728, 1249
PleI GAGTC 1 cut(s) 152
PpsI GAGTC 1 cut(s) 152
PscI ACATGT 1 cut(s) 237
Psp6I CCWGG 2 cut(s) 191, 568
PspGI CCWGG 2 cut(s) 191, 568
PspN4I GGNNCC 6 cut(s) 423, 567, 846, 856, 939, 1195
PspPI GGNCC 5 cut(s) 95, 189, 565, 710, 1271
PsuI RGATCY 2 cut(s) 844, 961
PsyI GACNNNGTC 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 1040
RsaI GTAC 1 cut(s) 856
RsaNI GTAC 1 cut(s) 855
RseI CAYNNNNRTG 1 cut(s) 897
SaqAI TTAA 2 cut(s) 285, 609
SatI GCNGC 5 cut(s) 36, 460, 709, 727, 1248
Sau3AI GATC 9 cut(s) 256, 261, 268, 636, 682, 844, 889, 961, 1042
Sau96I GGNCC 5 cut(s) 95, 189, 565, 710, 1271
SchI GAGTC 1 cut(s) 152
ScrFI CCNGG 5 cut(s) 178, 193, 311, 570, 1244
SduI GDGCHC 4 cut(s) 316, 582, 864, 1196
SfaNI GCATC 2 cut(s) 225, 516
SinI GGWCC 2 cut(s) 95, 189
SmiMI CAYNNNNRTG 1 cut(s) 897
SmlI CTYRAG 2 cut(s) 284, 608
SmoI CTYRAG 2 cut(s) 284, 608
SphI GCATGC 1 cut(s) 1100
Sse9I AATT 4 cut(s) 485, 596, 697, 1058
SsiI CCGC 6 cut(s) 214, 230, 459, 708, 726, 1100
SspMI CTAG 3 cut(s) 545, 687, 818
StyD4I CCNGG 5 cut(s) 176, 191, 309, 568, 1242
StyI CCWWGG 2 cut(s) 686, 720
TaaI ACNGT 1 cut(s) 859
TaiI ACGT 1 cut(s) 817
TaqI TCGA 1 cut(s) 811
TasI AATT 4 cut(s) 485, 596, 697, 1058
TauI GCSGC 3 cut(s) 462, 711, 729
TfiI GAWTC 2 cut(s) 751, 947
Tru1I TTAA 2 cut(s) 285, 609
Tru9I TTAA 2 cut(s) 285, 609
TscAI CASTG 2 cut(s) 28, 632
TseFI GTSAC 2 cut(s) 19, 1144
TseI GCWGC 2 cut(s) 35, 1247
Tsp45I GTSAC 2 cut(s) 19, 1144
TspDTI ATGAA 2 cut(s) 550, 1166
TspRI CASTG 2 cut(s) 28, 632
Tth111I GACNNNGTC 1 cut(s) 17
Vha464I CTTAAG 2 cut(s) 284, 608
VpaK11BI GGWCC 2 cut(s) 95, 189
XapI RAATTY 3 cut(s) 485, 697, 1058
XbaI TCTAGA 2 cut(s) 544, 817
XceI RCATGY 2 cut(s) 241, 1100
XcmI CCANNNNNNNNNTGG 1 cut(s) 838
XmaJI CCTAGG 1 cut(s) 686
XmnI GAANNNNTTC 1 cut(s) 209
XspI CTAG 3 cut(s) 545, 687, 818
ZraI GACGTC 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.