Rmu_sc0000708.1_g000012

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000708.1
OG0000169
Physical Location & Seq
Forward (+)
63644 .. 64957
1314 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000708.1_g000012.1.cds

Sequence Viewer

Length: 1269 bp
atggcctccatagatgctgtcacagcaagttttgcttcttctctcgctattgcttctggtggtagcgccccggatctgagtaagattggtggtggtccggtgcgcaagtcatctcagtcgtttctacttggcaagcctctgacccgtaagcgggtggatcccaaagctttcaaggctcacttccaccgtacttggatggtggataaggattttcgggttcaggaaaaggtgggcggtgtcttcttgttctcctttgaatcgctttgtgatcggaacaagatactacgtggaggagtttggtcttttgatagggcccttgtgtgttttgaaatttatgatggggttacggtttcggggattcctcctttgtatgaagaacctgagaatttcactcttatcggtaaagttttgggtggttttttagactatgataagaaggaattcaagaagggtgggattcggatcttcttcacccatgatatctctaaaccattcttgcttgagcggaagattttcttggatgtcgatgtcgaaccagtgcttcaatttcaatttgaacatctgaaagggagatgttcacagtgtggactggtcacgcatgctgggattgcatgcgaggagccgcatactccacttccgtcatctagggttttgaactttccggggtcgtcaacctcaggtgggtcgttttctttttcggctcagaacaagcgtgagttcctcactgcttcctcatctatccccaaaaagaagaacccaacctttcatcgtgttgaacgccctaaccctccctctacttctccttccgggtcgtctcctgtttcggatccggctgatggtattagtaagcatataacttcggggacagagtatactttggagcagcctttgcattcttttgtggtccataatggtgcgattggttctggtacaagtgaagctacagccatagtgcaggatatgcaacaagatgtcatggcttccaagaaaagggataggaatggaggttgtgatccctctccgaagaagttcaagaccattttgggtggtaaaattccaactttgcaggccgatgctttgggtttggttggagacgataatgattttcctcttgtcactctcaagaagaagatgggtaggccaatgggcagcagaaataagagccaacgctctgggaagaaggccggagcagcccctctgagactcacctaccctgcagccggtgcttcaggctctagccctagaggtaagggcaaaggaaagctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

422

Amino Acids

45.49

Weight (kDa)

9.65

Isoelectric Point (pI)

40.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 104
AccBSI CCGCTC 1 cut(s) 505
AccI GTMKAC 1 cut(s) 872
AciI CCGC 4 cut(s) 151, 234, 505, 623
AclWI GGATC 7 cut(s) 81, 152, 165, 470, 821, 834, 1007
AcsI RAATTY 4 cut(s) 330, 385, 440, 1053
AcuI CTGAAG 1 cut(s) 1212
AdeI CACNNNGTG 1 cut(s) 584
AfaI GTAC 2 cut(s) 190, 931
AfiI CCNNNNNNNGG 6 cut(s) 150, 151, 681, 836, 990, 1220
AjuI GAANNNNNNNTTGG 2 cut(s) 500, 532
AluBI AGCT 3 cut(s) 167, 941, 1264
AluI AGCT 3 cut(s) 167, 941, 1264
Alw26I GTCTC 3 cut(s) 819, 1086, 1195
AlwI GGATC 7 cut(s) 81, 152, 165, 470, 821, 834, 1007
AoxI GGCC 5 cut(s) 3, 312, 1068, 1139, 1182
ApaI GGGCCC 1 cut(s) 316
ApeKI GCWGC 4 cut(s) 883, 1149, 1190, 1217
ApoI RAATTY 4 cut(s) 330, 385, 440, 1053
Asp700I GAANNNNTTC 3 cut(s) 440, 512, 1028
AspLEI GCGC 2 cut(s) 68, 105
AspS9I GGNCC 4 cut(s) 95, 312, 313, 904
AsuC2I CCSGG 3 cut(s) 71, 663, 808
AsuHPI GGTGA 2 cut(s) 463, 1198
AvaII GGWCC 2 cut(s) 95, 904
AxyI CCTNAGG 1 cut(s) 676
BaeGI GKGCMC 1 cut(s) 316
BamHI GGATCC 2 cut(s) 157, 826
BanII GRGCYC 1 cut(s) 316
BbsI GAAGAC 1 cut(s) 232
BbvI GCAGC 4 cut(s) 895, 1161, 1202, 1229
BccI CCATC 4 cut(s) 190, 332, 830, 1126
BcnI CCSGG 3 cut(s) 71, 663, 808
BcoDI GTCTC 3 cut(s) 819, 1086, 1195
BfaI CTAG 3 cut(s) 645, 1236, 1242
BfmI CTRYAG 2 cut(s) 942, 1215
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 5 cut(s) 623, 884, 1150, 1191, 1218
BlsI GCNGC 5 cut(s) 624, 885, 1151, 1192, 1219
Bme1390I CCNGG 3 cut(s) 71, 663, 808
Bme18I GGWCC 2 cut(s) 95, 904
BmgT120I GGNCC 4 cut(s) 95, 312, 313, 904
BmiI GGNNCC 4 cut(s) 159, 314, 621, 828
BmrFI CCNGG 3 cut(s) 71, 663, 808
BmsI GCATC 2 cut(s) 4, 1063
BpiI GAAGAC 1 cut(s) 232
BpuEI CTTGAG 2 cut(s) 521, 1106
BpuMI CCSGG 3 cut(s) 71, 663, 808
BsaAI YACGTR 1 cut(s) 287
BsaBI GATNNNNATC 1 cut(s) 461
BsaJI CCNNGG 2 cut(s) 69, 662
BsaWI WCCGGW 1 cut(s) 97
Bsc4I CCNNNNNNNGG 6 cut(s) 150, 151, 681, 836, 990, 1220
Bse118I RCCGGY 1 cut(s) 1220
Bse1I ACTGG 2 cut(s) 536, 594
Bse21I CCTNAGG 1 cut(s) 676
Bse8I GATNNNNATC 1 cut(s) 461
BseDI CCNNGG 2 cut(s) 69, 662
BseGI GGATG 2 cut(s) 201, 526
BseJI GATNNNNATC 1 cut(s) 461
BseLI CCNNNNNNNGG 6 cut(s) 150, 151, 681, 836, 990, 1220
BseMII CTCAG 6 cut(s) 68, 128, 372, 690, 716, 1190
BseNI ACTGG 2 cut(s) 536, 594
BseRI GAGGAG 2 cut(s) 306, 632
BseSI GKGCMC 1 cut(s) 316
BseXI GCAGC 4 cut(s) 895, 1161, 1202, 1229
BseYI CCCAGC 1 cut(s) 602
BsgI GTGCAG 1 cut(s) 974
BshFI GGCC 5 cut(s) 5, 314, 1070, 1141, 1184
BsiSI CCGG 7 cut(s) 71, 98, 662, 807, 830, 1185, 1221
BslFI GGGAC 1 cut(s) 877
BslI CCNNNNNNNGG 6 cut(s) 150, 151, 681, 836, 990, 1220
BsmAI GTCTC 3 cut(s) 819, 1086, 1195
BsmBI CGTCTC 2 cut(s) 819, 1086
BsmFI GGGAC 1 cut(s) 877
BsmI GAATGC 1 cut(s) 892
BsnI GGCC 5 cut(s) 5, 314, 1070, 1141, 1184
Bsp120I GGGCCC 1 cut(s) 312
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
BspACI CCGC 4 cut(s) 151, 234, 505, 623
BspANI GGCC 5 cut(s) 5, 314, 1070, 1141, 1184
BspCNI CTCAG 6 cut(s) 69, 127, 373, 689, 715, 1191
BspLI GGNNCC 4 cut(s) 159, 314, 621, 828
BspMAI CTGCAG 1 cut(s) 1219
BspPI GGATC 7 cut(s) 81, 152, 165, 470, 821, 834, 1007
BsrBI CCGCTC 1 cut(s) 505
BsrFI RCCGGY 1 cut(s) 1220
BsrI ACTGG 2 cut(s) 536, 594
BssAI RCCGGY 1 cut(s) 1220
BssECI CCNNGG 2 cut(s) 69, 662
BssMI GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
BssNAI GTATAC 1 cut(s) 873
Bst1107I GTATAC 1 cut(s) 873
Bst4CI ACNGT 3 cut(s) 188, 349, 582
BstAPI GCANNNNNTGC 4 cut(s) 32, 889, 961, 1223
BstBAI YACGTR 1 cut(s) 287
BstC8I GCNNGC 4 cut(s) 134, 600, 613, 1068
BstDEI CTNAG 6 cut(s) 77, 114, 381, 676, 702, 1199
BstF5I GGATG 2 cut(s) 201, 526
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 2 cut(s) 68, 105
BstKTI GATC 6 cut(s) 76, 160, 271, 465, 829, 1015
BstMAI GTCTC 3 cut(s) 819, 1086, 1195
BstMBI GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
BstMWI GCNNNNNNNGC 8 cut(s) 23, 32, 173, 608, 889, 961, 1190, 1223
BstNSI RCATGY 2 cut(s) 602, 615
BstSCI CCNGG 3 cut(s) 69, 661, 806
BstSFI CTRYAG 2 cut(s) 942, 1215
BstSLI GKGCMC 1 cut(s) 316
BstV1I GCAGC 4 cut(s) 895, 1161, 1202, 1229
BstV2I GAAGAC 1 cut(s) 232
BstX2I RGATCY 4 cut(s) 73, 157, 462, 826
BstXI CCANNNNNNTGG 1 cut(s) 1172
BstYI RGATCY 4 cut(s) 73, 157, 462, 826
BstZ17I GTATAC 1 cut(s) 873
Bsu36I CCTNAGG 1 cut(s) 676
BsuRI GGCC 5 cut(s) 5, 314, 1070, 1141, 1184
BtsCI GGATG 2 cut(s) 201, 526
BtsI GCAGTG 1 cut(s) 723
BtsIMutI CAGTG 3 cut(s) 543, 587, 723
Cac8I GCNNGC 4 cut(s) 134, 600, 613, 1068
CfoI GCGC 2 cut(s) 68, 105
Cfr10I RCCGGY 1 cut(s) 1220
Cfr13I GGNCC 4 cut(s) 95, 312, 313, 904
Csp6I GTAC 2 cut(s) 189, 930
CspCI CAANNNNNGTGG 4 cut(s) 173, 208, 433, 468
CviAII CATG 4 cut(s) 476, 599, 612, 976
CviQI GTAC 2 cut(s) 189, 930
DdeI CTNAG 6 cut(s) 77, 114, 381, 676, 702, 1199
DpnI GATC 6 cut(s) 75, 159, 270, 464, 828, 1014
DpnII GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
DraIII CACNNNGTG 1 cut(s) 584
Eco24I GRGCYC 1 cut(s) 316
Eco32I GATATC 1 cut(s) 481
Eco47I GGWCC 2 cut(s) 95, 904
Eco57I CTGAAG 1 cut(s) 1212
Eco81I CCTNAGG 1 cut(s) 676
EcoO109I RGGNCCY 2 cut(s) 312, 313
EcoRI GAATTC 1 cut(s) 440
EcoRV GATATC 1 cut(s) 481
EcoT38I GRGCYC 1 cut(s) 316
Esp3I CGTCTC 2 cut(s) 819, 1086
FaeI CATG 4 cut(s) 479, 602, 615, 979
FalI AAGNNNNNCTT 7 cut(s) 19, 51, 164, 196, 500, 532, 1248
FaqI GGGAC 1 cut(s) 877
FatI CATG 4 cut(s) 475, 598, 611, 975
FauI CCCGC 1 cut(s) 144
FblI GTMKAC 1 cut(s) 872
Fnu4HI GCNGC 5 cut(s) 623, 884, 1150, 1191, 1218
FokI GGATG 2 cut(s) 208, 533
FriOI GRGCYC 1 cut(s) 316
Fsp4HI GCNGC 5 cut(s) 623, 884, 1150, 1191, 1218
FspBI CTAG 3 cut(s) 645, 1236, 1242
FspI TGCGCA 1 cut(s) 104
GlaI GCGC 2 cut(s) 67, 104
GluI GCNGC 5 cut(s) 623, 884, 1150, 1191, 1218
GsaI CCCAGC 1 cut(s) 606
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 5 cut(s) 5, 314, 1070, 1141, 1184
HapII CCGG 7 cut(s) 71, 98, 662, 807, 830, 1185, 1221
HhaI GCGC 2 cut(s) 68, 105
Hin1II CATG 4 cut(s) 479, 602, 615, 979
Hin6I GCGC 2 cut(s) 66, 103
HinP1I GCGC 2 cut(s) 66, 103
HincII GTYRAC 1 cut(s) 672
HindII GTYRAC 1 cut(s) 672
HindIII AAGCTT 2 cut(s) 165, 1262
HinfI GANTC 4 cut(s) 257, 358, 457, 1203
HpaII CCGG 7 cut(s) 71, 98, 662, 807, 830, 1185, 1221
HphI GGTGA 2 cut(s) 463, 1198
Hpy166II GTNNAC 4 cut(s) 578, 587, 672, 873
Hpy188I TCNGA 9 cut(s) 78, 141, 273, 462, 564, 705, 826, 1023, 1200
Hpy188III TCNNGA 4 cut(s) 221, 445, 1033, 1123
Hpy8I GTNNAC 4 cut(s) 578, 587, 672, 873
HpyAV CCTTC 4 cut(s) 430, 442, 813, 1174
HpyCH4III ACNGT 3 cut(s) 188, 349, 582
HpyCH4IV ACGT 1 cut(s) 286
HpyCH4V TGCA 6 cut(s) 611, 892, 955, 964, 1066, 1217
HpyF10VI GCNNNNNNNGC 8 cut(s) 23, 32, 173, 608, 889, 961, 1190, 1223
HpyF3I CTNAG 6 cut(s) 77, 114, 381, 676, 702, 1199
HpySE526I ACGT 1 cut(s) 286
Hsp92II CATG 4 cut(s) 479, 602, 615, 979
HspAI GCGC 2 cut(s) 66, 103
Kzo9I GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
LmnI GCTCC 3 cut(s) 619, 880, 1187
Lsp1109I GCAGC 4 cut(s) 895, 1161, 1202, 1229
LweI GCATC 2 cut(s) 4, 1063
MaeI CTAG 3 cut(s) 645, 1236, 1242
MaeII ACGT 1 cut(s) 286
MaeIII GTNAC 4 cut(s) 19, 343, 592, 1114
MalI GATC 6 cut(s) 75, 159, 270, 464, 828, 1014
MbiI CCGCTC 1 cut(s) 505
MboI GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
MflI RGATCY 4 cut(s) 73, 157, 462, 826
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 6 cut(s) 330, 385, 440, 545, 551, 1053
MlyI GAGTC 1 cut(s) 1197
MmeI TCCRAC 2 cut(s) 1069, 1082
MroXI GAANNNNTTC 3 cut(s) 440, 512, 1028
MslI CAYNNNNRTG 1 cut(s) 912
MspI CCGG 7 cut(s) 71, 98, 662, 807, 830, 1185, 1221
MspR9I CCNGG 3 cut(s) 71, 663, 808
Mva1269I GAATGC 1 cut(s) 892
MwoI GCNNNNNNNGC 8 cut(s) 23, 32, 173, 608, 889, 961, 1190, 1223
NciI CCSGG 3 cut(s) 71, 663, 808
NdeII GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
NlaIII CATG 4 cut(s) 479, 602, 615, 979
NlaIV GGNNCC 4 cut(s) 159, 314, 621, 828
NmuCI GTSAC 3 cut(s) 19, 592, 1114
NsbI TGCGCA 1 cut(s) 104
NspI RCATGY 2 cut(s) 602, 615
PaeI GCATGC 2 cut(s) 602, 615
PctI GAATGC 1 cut(s) 892
PdmI GAANNNNTTC 3 cut(s) 440, 512, 1028
PfeI GAWTC 3 cut(s) 257, 358, 457
PkrI GCNGC 5 cut(s) 624, 885, 1151, 1192, 1219
PleI GAGTC 1 cut(s) 1197
PpsI GAGTC 1 cut(s) 1197
Ppu21I YACGTR 1 cut(s) 287
PspFI CCCAGC 1 cut(s) 602
PspN4I GGNNCC 4 cut(s) 159, 314, 621, 828
PspOMI GGGCCC 1 cut(s) 312
PspPI GGNCC 4 cut(s) 95, 312, 313, 904
PstI CTGCAG 1 cut(s) 1219
PsuI RGATCY 4 cut(s) 73, 157, 462, 826
RsaI GTAC 2 cut(s) 190, 931
RsaNI GTAC 2 cut(s) 189, 930
RseI CAYNNNNRTG 1 cut(s) 912
SatI GCNGC 5 cut(s) 623, 884, 1150, 1191, 1218
Sau3AI GATC 6 cut(s) 73, 157, 268, 462, 826, 1012
Sau96I GGNCC 4 cut(s) 95, 312, 313, 904
SchI GAGTC 1 cut(s) 1197
ScrFI CCNGG 3 cut(s) 71, 663, 808
SduI GDGCHC 1 cut(s) 316
SfaNI GCATC 2 cut(s) 4, 1063
SfcI CTRYAG 2 cut(s) 942, 1215
SinI GGWCC 2 cut(s) 95, 904
SmiMI CAYNNNNRTG 1 cut(s) 912
SmlI CTYRAG 2 cut(s) 500, 1121
SmoI CTYRAG 2 cut(s) 500, 1121
SphI GCATGC 2 cut(s) 602, 615
Sse9I AATT 6 cut(s) 330, 385, 440, 545, 551, 1053
SsiI CCGC 4 cut(s) 151, 234, 505, 623
SspMI CTAG 3 cut(s) 645, 1236, 1242
StyD4I CCNGG 3 cut(s) 69, 661, 806
TaaI ACNGT 3 cut(s) 188, 349, 582
TaiI ACGT 1 cut(s) 289
TaqI TCGA 2 cut(s) 525, 531
TasI AATT 6 cut(s) 330, 385, 440, 545, 551, 1053
TauI GCSGC 1 cut(s) 625
TfiI GAWTC 3 cut(s) 257, 358, 457
TscAI CASTG 3 cut(s) 543, 587, 730
TseFI GTSAC 3 cut(s) 19, 592, 1114
TseI GCWGC 4 cut(s) 883, 1149, 1190, 1217
Tsp45I GTSAC 3 cut(s) 19, 592, 1114
TspDTI ATGAA 2 cut(s) 387, 755
TspGWI ACGGA 1 cut(s) 627
TspRI CASTG 3 cut(s) 543, 587, 730
VpaK11BI GGWCC 2 cut(s) 95, 904
XapI RAATTY 4 cut(s) 330, 385, 440, 1053
XceI RCATGY 2 cut(s) 602, 615
XmiI GTMKAC 1 cut(s) 872
XmnI GAANNNNTTC 3 cut(s) 440, 512, 1028
XspI CTAG 3 cut(s) 645, 1236, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.