FvH4_6g07632

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000169
Physical Location & Seq
Forward (+)
4586302 .. 4589109
2808 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g07632.t1

Sequence Viewer

Length: 1623 bp
ATGCGTCCTTACGAAGTTGAAGTTCATGGTGTCAAAGTAAAAGTAAGCGTCGTGGCGGATAACGATCGTTTGATCAACGAGAAAATATCTGAATTCAAGAAGCTCGATAAGAAGAATGTTGTGGGAGTTGATGTTAAGACTACATACAATGCTTCCCTACTACTTTTTTGTGTTGAAGGTCATTGCCTGATCCTCGCTCGTATAAAGGATGCTCATAAATTTGAAGTTTGGAAGCTTCTTTCTGACCAGAATACTTGTTTTGTGGGTTCAAATTTTGAACACATGAAACATTGTTCTTACAGTGGTAAAGAAATATTTGAAAAGGTAGGTGGAATAGGTGTTGAATTGGATCGTTTGGCTGCTATGATACTAAAGAAACCAAGTCTGAAAAAGAAAGGGGTGTATGAGTTGGCAGGTGAAATCGGTCTTCATGTCAAGCCAGTGACCGGAACTTGTCCTAAATGGGATGCCAAAGTGTTTTCAGAGGAAGAGATCAACCGCGATCTACTTTCTCCTCTCTCAATCATTATCGTCATCATGTCCTCCATTGACACAGTCACAGCGTCCTTCGCCGCTTCCTTGGCTTTGGCCGACGGCGAAAAAGCGCCAGATTTGGGGAAGATTGGAGGAGGTCCTGTGAGACATTCATCCCAGTCTTTTCTTCTTGCTAAGCCACTCACACGCCGTGTTATGGATCCAGAAGCTTTCAAGTCGCATTTTGCCCGTGCTTGGGTGGTGCAGCGGAATTTTCGAATTCAGGAGAGGGGTGATCTCTTCCTCGTCTCATTTGAATCTGAGAAGGATCGAACAAAAGTTCTGAAGGGTGGCGCATGGTGTTTTGACCGTGCACCGGTTTGTCTTGAGATGTATGATGGGATTACTCCTATGACCGACGTTCCTATGCGTCATGTGAGGATGTGGGTGATCGTCTCTTTGATCCCACCTTGGTACGAGGAGCCGGATAACCTTCGTTTGATTGGAAACCTTCTTGGAGGATACTTGGATTATGATCGTACCGAGTTTCGAAAGGGAGTGATGAAGATCTTATTTACCCACGAAATCCATAAACCACTCCTTTTGGAAAGAAGCATTAATTTTGGTGCTCAACTAAAACCAGGTTATGCATTTTCGGCAAAGCCCACAACTGGTGTGGCTATCAATCCAGCGCCGGTGGTTTCCTCGACTCCGGTAGTGAAGAGAAAGCCGGCCTGTGGGTTTGGTAATTCTACTCTTGAGATTGAGGTTGCCTTTGATTTAGAGACCTCTCCTATTGTGTTAGAAGCTGCTGTTGGGAAGGATGCAGTATTGTCTACTACTCCCTCAAAGAAACGAGGATGTAATGGGGGTTGTTCTCCCTCCCTGAAGAAAATCAAGACTATTCTGGGCGGTAAACTTCTCAAACATCAAGCTGAATCTTTGGGTTTGGTCGACATAGGTGGGGATGATGCGCCTCTTGTGACCCTGAAGAAGAAGAAGTTGGGTTGTCGTCTGGGTAGCAGAAATAAGGTATCTCGGTCTACCAAGAAGACAAAGGCTCCTCTGCGTATTACTTACCCGATTGCTGCCAAGGTGGGTGACAAGGCAAGCCCTAATGCCAAGGGCAAGGGCAAGGGCAAGACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_pol_A_exo1

Protein Analysis

541

Amino Acids

59.29

Weight (kDa)

9.51

Isoelectric Point (pI)

28.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 218 - 289 1.1e-06 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 404
Acc36I ACCTGC 1 cut(s) 404
AccI GTMKAC 3 cut(s) 1310, 1428, 1517
AccII CGCG 1 cut(s) 501
AciI CCGC 5 cut(s) 56, 499, 573, 742, 1386
AclWI GGATC 6 cut(s) 184, 357, 689, 702, 810, 931
AcoI YGGCCR 1 cut(s) 588
AcsI RAATTY 5 cut(s) 92, 218, 271, 745, 753
AcuI CTGAAG 3 cut(s) 839, 1382, 1484
AdeI CACNNNGTG 1 cut(s) 686
AfaI GTAC 2 cut(s) 950, 1015
AfiI CCNNNNNNNGG 8 cut(s) 446, 614, 691, 729, 730, 850, 1145, 1211
AgeI ACCGGT 1 cut(s) 850
AjnI CCWGG 1 cut(s) 1114
AjuI GAANNNNNNNTTGG 4 cut(s) 1272, 1304, 1460, 1492
AluBI AGCT 5 cut(s) 103, 235, 704, 1283, 1409
AluI AGCT 5 cut(s) 103, 235, 704, 1283, 1409
Alw21I GWGCWC 2 cut(s) 850, 1105
Alw26I GTCTC 4 cut(s) 634, 787, 934, 1253
Alw44I GTGCAC 1 cut(s) 846
AlwI GGATC 6 cut(s) 184, 357, 689, 702, 810, 931
AoxI GGCC 2 cut(s) 588, 1206
ApaLI GTGCAC 1 cut(s) 846
ApeKI GCWGC 4 cut(s) 359, 739, 1283, 1562
ApoI RAATTY 5 cut(s) 92, 218, 271, 745, 753
AseI ATTAAT 1 cut(s) 1092
AsiGI ACCGGT 1 cut(s) 850
AspLEI GCGC 4 cut(s) 607, 830, 1168, 1450
AspS9I GGNCC 1 cut(s) 632
AsuHPI GGTGA 4 cut(s) 428, 779, 934, 1586
AsuII TTCGAA 2 cut(s) 751, 1024
AvaII GGWCC 1 cut(s) 632
BaeGI GKGCMC 1 cut(s) 850
BamHI GGATCC 1 cut(s) 694
BbsI GAAGAC 2 cut(s) 419, 1532
Bbv12I GWGCWC 2 cut(s) 850, 1105
BbvI GCAGC 4 cut(s) 346, 751, 1270, 1549
BccI CCATC 1 cut(s) 866
BceAI ACGGC 2 cut(s) 610, 669
BciT130I CCWGG 1 cut(s) 1116
BciVI GTATCC 1 cut(s) 989
BclI TGATCA 1 cut(s) 72
BcoDI GTCTC 4 cut(s) 634, 787, 934, 1253
BfoI RGCGCY 2 cut(s) 608, 1169
BfuAI ACCTGC 1 cut(s) 404
BfuI GTATCC 1 cut(s) 989
BglII AGATCT 1 cut(s) 1041
BisI GCNGC 5 cut(s) 360, 573, 740, 1284, 1563
BlpI GCTNAGC 1 cut(s) 669
BlsI GCNGC 5 cut(s) 361, 574, 741, 1285, 1564
Bme1390I CCNGG 1 cut(s) 1116
Bme18I GGWCC 1 cut(s) 632
BmgT120I GGNCC 1 cut(s) 632
BmiI GGNNCC 3 cut(s) 696, 957, 1536
BmrFI CCNGG 1 cut(s) 1116
BmrI ACTGGG 1 cut(s) 646
BmsI GCATC 4 cut(s) 199, 457, 1288, 1435
BmuI ACTGGG 1 cut(s) 646
BpiI GAAGAC 2 cut(s) 419, 1532
Bpu1102I GCTNAGC 1 cut(s) 669
Bpu14I TTCGAA 2 cut(s) 751, 1024
BpuEI CTTGAG 2 cut(s) 881, 1253
BsaBI GATNNNNATC 3 cut(s) 63, 1008, 1040
BsaI GGTCTC 1 cut(s) 1253
BsaJI CCNNGG 4 cut(s) 579, 944, 1566, 1596
BsaWI WCCGGW 3 cut(s) 446, 850, 1186
BsaXI ACNNNNNCTCC 6 cut(s) 117, 147, 621, 651, 1519, 1549
Bsc4I CCNNNNNNNGG 8 cut(s) 446, 614, 691, 729, 730, 850, 1145, 1211
Bse118I RCCGGY 3 cut(s) 850, 1168, 1204
Bse1I ACTGG 3 cut(s) 440, 652, 1150
Bse3DI GCAATG 1 cut(s) 181
Bse8I GATNNNNATC 3 cut(s) 63, 1008, 1040
BseBI CCWGG 1 cut(s) 1116
BseDI CCNNGG 4 cut(s) 579, 944, 1566, 1596
BseGI GGATG 7 cut(s) 214, 472, 647, 921, 1303, 1340, 1447
BseJI GATNNNNATC 3 cut(s) 63, 1008, 1040
BseLI CCNNNNNNNGG 8 cut(s) 446, 614, 691, 729, 730, 850, 1145, 1211
BseMI GCAATG 1 cut(s) 181
BseMII CTCAG 1 cut(s) 786
BseNI ACTGG 3 cut(s) 440, 652, 1150
BseRI GAGGAG 4 cut(s) 504, 642, 968, 1527
BseSI GKGCMC 1 cut(s) 850
BseXI GCAGC 4 cut(s) 346, 751, 1270, 1549
BsgI GTGCAG 1 cut(s) 758
Bsh1236I CGCG 1 cut(s) 501
Bsh1285I CGRYCG 1 cut(s) 67
BshFI GGCC 2 cut(s) 590, 1208
BshTI ACCGGT 1 cut(s) 850
BsiEI CGRYCG 1 cut(s) 67
BsiHKAI GWGCWC 2 cut(s) 850, 1105
BsiSI CCGG 6 cut(s) 447, 851, 959, 1169, 1187, 1205
BslI CCNNNNNNNGG 8 cut(s) 446, 614, 691, 729, 730, 850, 1145, 1211
BsmAI GTCTC 4 cut(s) 634, 787, 934, 1253
BsmBI CGTCTC 2 cut(s) 787, 934
BsnI GGCC 2 cut(s) 590, 1208
Bso31I GGTCTC 1 cut(s) 1253
Bsp119I TTCGAA 2 cut(s) 751, 1024
Bsp1286I GDGCHC 2 cut(s) 850, 1105
Bsp1720I GCTNAGC 1 cut(s) 669
BspACI CCGC 5 cut(s) 56, 499, 573, 742, 1386
BspANI GGCC 2 cut(s) 590, 1208
BspCNI CTCAG 1 cut(s) 787
BspFNI CGCG 1 cut(s) 501
BspLI GGNNCC 3 cut(s) 696, 957, 1536
BspMI ACCTGC 1 cut(s) 404
BspPI GGATC 6 cut(s) 184, 357, 689, 702, 810, 931
BspT104I TTCGAA 2 cut(s) 751, 1024
BspTNI GGTCTC 1 cut(s) 1253
BsrDI GCAATG 1 cut(s) 181
BsrFI RCCGGY 3 cut(s) 850, 1168, 1204
BsrI ACTGG 3 cut(s) 440, 652, 1150
BssAI RCCGGY 3 cut(s) 850, 1168, 1204
BssECI CCNNGG 4 cut(s) 579, 944, 1566, 1596
BssT1I CCWWGG 4 cut(s) 579, 944, 1566, 1596
Bst2UI CCWGG 1 cut(s) 1116
Bst4CI ACNGT 3 cut(s) 302, 556, 845
Bst6I CTCTTC 3 cut(s) 483, 779, 1190
BstBI TTCGAA 2 cut(s) 751, 1024
BstC8I GCNNGC 2 cut(s) 1206, 1585
BstDEI CTNAG 3 cut(s) 669, 795, 1620
BstF5I GGATG 7 cut(s) 214, 472, 647, 921, 1303, 1340, 1447
BstFNI CGCG 1 cut(s) 501
BstH2I RGCGCY 2 cut(s) 608, 1169
BstHHI GCGC 4 cut(s) 607, 830, 1168, 1450
BstMAI GTCTC 4 cut(s) 634, 787, 934, 1253
BstMCI CGRYCG 1 cut(s) 67
BstMWI GCNNNNNNNGC 3 cut(s) 569, 581, 1130
BstNI CCWGG 1 cut(s) 1116
BstSCI CCNGG 1 cut(s) 1114
BstSLI GKGCMC 1 cut(s) 850
BstUI CGCG 1 cut(s) 501
BstV1I GCAGC 4 cut(s) 346, 751, 1270, 1549
BstV2I GAAGAC 2 cut(s) 419, 1532
BstX2I RGATCY 2 cut(s) 694, 1041
BstYI RGATCY 2 cut(s) 694, 1041
BsuI GTATCC 1 cut(s) 989
BsuRI GGCC 2 cut(s) 590, 1208
BtsCI GGATG 7 cut(s) 214, 472, 647, 921, 1303, 1340, 1447
BtsIMutI CAGTG 2 cut(s) 307, 447
BveI ACCTGC 1 cut(s) 404
Cac8I GCNNGC 2 cut(s) 1206, 1585
CfoI GCGC 4 cut(s) 607, 830, 1168, 1450
Cfr10I RCCGGY 3 cut(s) 850, 1168, 1204
Cfr13I GGNCC 1 cut(s) 632
CseI GACGC 3 cut(s) 37, 552, 893
CsiI ACCWGGT 1 cut(s) 1114
Csp6I GTAC 2 cut(s) 949, 1014
CspAI ACCGGT 1 cut(s) 850
CspCI CAANNNNNGTGG 4 cut(s) 1059, 1094, 1131, 1166
CviAII CATG 6 cut(s) 26, 283, 431, 538, 831, 908
CviQI GTAC 2 cut(s) 949, 1014
DdeI CTNAG 3 cut(s) 669, 795, 1620
DraIII CACNNNGTG 1 cut(s) 686
EaeI YGGCCR 1 cut(s) 588
Eam1104I CTCTTC 3 cut(s) 483, 779, 1190
EarI CTCTTC 3 cut(s) 483, 779, 1190
EciI GGCGGA 1 cut(s) 71
Eco130I CCWWGG 4 cut(s) 579, 944, 1566, 1596
Eco31I GGTCTC 1 cut(s) 1253
Eco47I GGWCC 1 cut(s) 632
Eco57I CTGAAG 3 cut(s) 839, 1382, 1484
EcoO109I RGGNCCY 1 cut(s) 632
EcoRI GAATTC 2 cut(s) 92, 753
EcoRII CCWGG 1 cut(s) 1114
EcoT14I CCWWGG 4 cut(s) 579, 944, 1566, 1596
EcoT22I ATGCAT 1 cut(s) 1126
ErhI CCWWGG 4 cut(s) 579, 944, 1566, 1596
Esp3I CGTCTC 2 cut(s) 787, 934
FaeI CATG 6 cut(s) 29, 286, 434, 541, 834, 911
FatI CATG 6 cut(s) 25, 282, 430, 537, 830, 907
FbaI TGATCA 1 cut(s) 72
FblI GTMKAC 3 cut(s) 1310, 1428, 1517
Fnu4HI GCNGC 5 cut(s) 360, 573, 740, 1284, 1563
FokI GGATG 7 cut(s) 221, 479, 634, 928, 1310, 1347, 1454
Fsp4HI GCNGC 5 cut(s) 360, 573, 740, 1284, 1563
GlaI GCGC 4 cut(s) 606, 829, 1167, 1449
GluI GCNGC 5 cut(s) 360, 573, 740, 1284, 1563
HaeII RGCGCY 2 cut(s) 608, 1169
HaeIII GGCC 2 cut(s) 590, 1208
HapII CCGG 6 cut(s) 447, 851, 959, 1169, 1187, 1205
HgaI GACGC 3 cut(s) 37, 552, 893
HhaI GCGC 4 cut(s) 607, 830, 1168, 1450
Hin1II CATG 6 cut(s) 29, 286, 434, 541, 834, 911
Hin6I GCGC 4 cut(s) 605, 828, 1166, 1448
HinP1I GCGC 4 cut(s) 605, 828, 1166, 1448
HincII GTYRAC 1 cut(s) 1429
HindII GTYRAC 1 cut(s) 1429
HindIII AAGCTT 2 cut(s) 233, 702
HinfI GANTC 3 cut(s) 791, 1183, 1412
HpaII CCGG 6 cut(s) 447, 851, 959, 1169, 1187, 1205
HphI GGTGA 4 cut(s) 428, 779, 934, 1586
Hpy166II GTNNAC 5 cut(s) 848, 1311, 1391, 1429, 1518
Hpy188I TCNGA 6 cut(s) 91, 244, 387, 484, 796, 819
Hpy188III TCNNGA 6 cut(s) 97, 698, 758, 860, 1232, 1372
Hpy8I GTNNAC 5 cut(s) 848, 1311, 1391, 1429, 1518
Hpy99I CGWCG 3 cut(s) 53, 596, 896
HpyAV CCTTC 7 cut(s) 170, 577, 793, 814, 977, 995, 1288
HpyCH4III ACNGT 3 cut(s) 302, 556, 845
HpyCH4IV ACGT 1 cut(s) 894
HpyCH4V TGCA 4 cut(s) 739, 848, 1124, 1301
HpyF10VI GCNNNNNNNGC 3 cut(s) 569, 581, 1130
HpyF3I CTNAG 3 cut(s) 669, 795, 1620
HpySE526I ACGT 1 cut(s) 894
Hsp92II CATG 6 cut(s) 29, 286, 434, 541, 834, 911
HspAI GCGC 4 cut(s) 605, 828, 1166, 1448
KroI GCCGGC 1 cut(s) 1204
KroNI GCCGGC 1 cut(s) 1206
Ksp22I TGATCA 1 cut(s) 72
LmnI GCTCC 2 cut(s) 955, 1540
Lsp1109I GCAGC 4 cut(s) 346, 751, 1270, 1549
LweI GCATC 4 cut(s) 199, 457, 1288, 1435
MabI ACCWGGT 1 cut(s) 1114
MaeII ACGT 1 cut(s) 894
MaeIII GTNAC 4 cut(s) 442, 556, 1456, 1574
MflI RGATCY 2 cut(s) 694, 1041
MhlI GDGCHC 2 cut(s) 850, 1105
MluCI AATT 8 cut(s) 92, 218, 271, 344, 745, 753, 1093, 1222
MlyI GAGTC 1 cut(s) 1177
Mph1103I ATGCAT 1 cut(s) 1126
MroNI GCCGGC 1 cut(s) 1204
MseI TTAA 2 cut(s) 135, 1092
MspA1I CMGCKG 1 cut(s) 742
MspI CCGG 6 cut(s) 447, 851, 959, 1169, 1187, 1205
MspR9I CCNGG 1 cut(s) 1116
MvaI CCWGG 1 cut(s) 1116
MvnI CGCG 1 cut(s) 501
MwoI GCNNNNNNNGC 3 cut(s) 569, 581, 1130
NaeI GCCGGC 1 cut(s) 1206
NgoMIV GCCGGC 1 cut(s) 1204
NlaIII CATG 6 cut(s) 29, 286, 434, 541, 834, 911
NlaIV GGNNCC 3 cut(s) 696, 957, 1536
NmuCI GTSAC 4 cut(s) 442, 556, 1456, 1574
NsiI ATGCAT 1 cut(s) 1126
NspV TTCGAA 2 cut(s) 751, 1024
PaqCI CACCTGC 1 cut(s) 404
PdiI GCCGGC 1 cut(s) 1206
PfeI GAWTC 2 cut(s) 791, 1412
PflFI GACNNNGTC 1 cut(s) 554
PinAI ACCGGT 1 cut(s) 850
PkrI GCNGC 5 cut(s) 361, 574, 741, 1285, 1564
Ple19I CGATCG 1 cut(s) 67
PleI GAGTC 1 cut(s) 1177
PpsI GAGTC 1 cut(s) 1177
PpuMI RGGWCCY 1 cut(s) 632
PshBI ATTAAT 1 cut(s) 1092
Psp5II RGGWCCY 1 cut(s) 632
Psp6I CCWGG 1 cut(s) 1114
PspGI CCWGG 1 cut(s) 1114
PspN4I GGNNCC 3 cut(s) 696, 957, 1536
PspPI GGNCC 1 cut(s) 632
PspPPI RGGWCCY 1 cut(s) 632
PsuI RGATCY 2 cut(s) 694, 1041
PsyI GACNNNGTC 1 cut(s) 554
PvuI CGATCG 1 cut(s) 67
RsaI GTAC 2 cut(s) 950, 1015
RsaNI GTAC 2 cut(s) 949, 1014
SalI GTCGAC 1 cut(s) 1427
SaqAI TTAA 2 cut(s) 135, 1092
SatI GCNGC 5 cut(s) 360, 573, 740, 1284, 1563
Sau96I GGNCC 1 cut(s) 632
SchI GAGTC 1 cut(s) 1177
ScrFI CCNGG 1 cut(s) 1116
SduI GDGCHC 2 cut(s) 850, 1105
SexAI ACCWGGT 1 cut(s) 1114
SfaNI GCATC 4 cut(s) 199, 457, 1288, 1435
SfuI TTCGAA 2 cut(s) 751, 1024
SgrAI CRCCGGYG 1 cut(s) 1168
SinI GGWCC 1 cut(s) 632
SmlI CTYRAG 2 cut(s) 860, 1232
SmoI CTYRAG 2 cut(s) 860, 1232
Sse9I AATT 8 cut(s) 92, 218, 271, 344, 745, 753, 1093, 1222
SsiI CCGC 5 cut(s) 56, 499, 573, 742, 1386
SspI AATATT 1 cut(s) 315
StyD4I CCNGG 1 cut(s) 1114
StyI CCWWGG 4 cut(s) 579, 944, 1566, 1596
TaaI ACNGT 3 cut(s) 302, 556, 845
TaiI ACGT 1 cut(s) 897
TaqI TCGA 6 cut(s) 105, 751, 805, 1024, 1181, 1428
TaqII GACCGA 3 cut(s) 413, 905, 1503
TasI AATT 8 cut(s) 92, 218, 271, 344, 745, 753, 1093, 1222
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 2 cut(s) 791, 1412
Tru1I TTAA 2 cut(s) 135, 1092
Tru9I TTAA 2 cut(s) 135, 1092
TscAI CASTG 2 cut(s) 307, 447
TseFI GTSAC 4 cut(s) 442, 556, 1456, 1574
TseI GCWGC 4 cut(s) 359, 739, 1283, 1562
Tsp45I GTSAC 4 cut(s) 442, 556, 1456, 1574
TspDTI ATGAA 5 cut(s) 14, 299, 419, 636, 1052
TspRI CASTG 2 cut(s) 307, 447
Tth111I GACNNNGTC 1 cut(s) 554
VneI GTGCAC 1 cut(s) 846
VpaK11BI GGWCC 1 cut(s) 632
VspI ATTAAT 1 cut(s) 1092
XapI RAATTY 5 cut(s) 92, 218, 271, 745, 753
XcmI CCANNNNNNNNNTGG 1 cut(s) 1147
XmiI GTMKAC 3 cut(s) 1310, 1428, 1517
Zsp2I ATGCAT 1 cut(s) 1126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.