RchiOBHm_Chr7g0191711

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
10383004 .. 10384387
1384 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17133

Sequence Viewer

Length: 867 bp
ATGGATAGAATTCTCGGTCAGGGAGGTCAGGGTACCGTGTACAAAGGAATGTTAGCAGCTGGAAGAATCGTTTCTGTGAAGAAGTCTAACATATTTAATGAAGGCGAAGTTGGAAAATTTATTAATGAAATTGTCATCCTTTCACAAGTTAGCCACAGAAATCTGGTTAAGCTATTAGGTTGCTGTATGGAAACCAAAGTTCCACTCTTGATTTATGAGTTCATACCCAATGGAACACTTTCTCACTATATTCAGCATCAAAATGAGGAGTTTCCTCTTACGTGGGAAGTACGCTTACGAGTTGCCATCGAAGTTGCAGGAGCTATTTCATACTTGCACTCATCAGCTTCCTCTCCCATTTACCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGGTAAGTTTAGAGCTAAAGTTAAGGACTTTGGAACATCAAGATCAGTAGCCATAGATAAAACACATCGTACCATGACAAACGGAGAATTGGTTGCGCTTTCAAATGGAGGTAGTGCTCCTGATCTAGGGAGAATTGGTGGCGGCCTTGTTCGTCGGTCTTTCAAATCTTTTCTGATTGGAAAGCCTCTGACCCGCCCACCGGTCAACCCTGCTGCCTTCAAGGCTCAATTCCTCCGTACCTGGATGGATGTCACTTTGGTGATGTTGAAGAAGAAATCGGGCAAGCTATTTGGGAGTAGGAACAAGAATCATCGCCCTAGCAAGAAGTCGAATGTCGCTACTTTGCGACACTCTTACCCTACAATTACTGGTATTGATCCCAGCCCTAGTGACAAGGGCAAGGGAAAGATTCAGGCTTTTCCAGTGAGGGTCACCTGTCCTTTGCTTGATTGGTTATACCATTTTTGA

Protein Analysis

288

Amino Acids

31.89

Weight (kDa)

10.14

Isoelectric Point (pI)

34.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 2 - 161 1.8e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 3 - 154 2.6e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 32
AccB1I GGYRCC 1 cut(s) 32
AciI CCGC 2 cut(s) 540, 592
AclWI GGATC 1 cut(s) 770
AcsI RAATTY 2 cut(s) 9, 116
AfaI GTAC 5 cut(s) 34, 41, 291, 469, 637
AfiI CCNNNNNNNGG 2 cut(s) 524, 598
AgeI ACCGGT 1 cut(s) 598
AgsI TTSAA 5 cut(s) 384, 501, 562, 619, 667
AhdI GACNNNNNGTC 1 cut(s) 376
AjnI CCWGG 1 cut(s) 638
AjuI GAANNNNNNNTTGG 2 cut(s) 93, 125
AleI CACNNNNGTG 1 cut(s) 656
AluBI AGCT 6 cut(s) 59, 172, 323, 347, 413, 685
AluI AGCT 6 cut(s) 59, 172, 323, 347, 413, 685
Alw21I GWGCWC 1 cut(s) 517
Alw26I GTCTC 1 cut(s) 363
AlwI GGATC 1 cut(s) 770
AoxI GGCC 1 cut(s) 541
ApeKI GCWGC 2 cut(s) 56, 611
ApoI RAATTY 2 cut(s) 9, 116
AseI ATTAAT 1 cut(s) 123
AsiGI ACCGGT 1 cut(s) 598
Asp700I GAANNNNTTC 2 cut(s) 70, 238
Asp718I GGTACC 1 cut(s) 32
AspLEI GCGC 1 cut(s) 496
AsuHPI GGTGA 2 cut(s) 670, 823
BanI GGYRCC 1 cut(s) 32
BarI GAAGNNNNNNTAC 2 cut(s) 279, 311
BbsI GAAGAC 1 cut(s) 372
Bbv12I GWGCWC 1 cut(s) 517
BbvI GCAGC 2 cut(s) 68, 598
BccI CCATC 4 cut(s) 314, 372, 392, 637
BciT130I CCWGG 1 cut(s) 640
BcoDI GTCTC 1 cut(s) 363
BfaI CTAG 3 cut(s) 524, 717, 786
BglI GCCNNNNNGGC 1 cut(s) 620
BisI GCNGC 3 cut(s) 57, 541, 612
BlsI GCNGC 3 cut(s) 58, 542, 613
Bme1390I CCNGG 1 cut(s) 640
BmeRI GACNNNNNGTC 1 cut(s) 376
BmiI GGNNCC 1 cut(s) 34
BmrFI CCNGG 1 cut(s) 640
BmsI GCATC 1 cut(s) 265
BpiI GAAGAC 1 cut(s) 372
BsaAI YACGTR 1 cut(s) 282
BsaWI WCCGGW 1 cut(s) 598
BsaXI ACNNNNNCTCC 4 cut(s) 474, 504, 520, 550
Bsc4I CCNNNNNNNGG 2 cut(s) 524, 598
Bse118I RCCGGY 1 cut(s) 598
Bse1I ACTGG 2 cut(s) 772, 821
BseBI CCWGG 1 cut(s) 640
BseGI GGATG 4 cut(s) 135, 403, 648, 652
BseLI CCNNNNNNNGG 2 cut(s) 524, 598
BseNI ACTGG 2 cut(s) 772, 821
BseRI GAGGAG 1 cut(s) 281
BseXI GCAGC 2 cut(s) 68, 598
BseYI CCCAGC 1 cut(s) 779
BshFI GGCC 1 cut(s) 543
BshNI GGYRCC 1 cut(s) 32
BshTI ACCGGT 1 cut(s) 598
BsiHKAI GWGCWC 1 cut(s) 517
BsiSI CCGG 1 cut(s) 599
BslI CCNNNNNNNGG 2 cut(s) 524, 598
BsmAI GTCTC 1 cut(s) 363
BsnI GGCC 1 cut(s) 543
Bsp1286I GDGCHC 1 cut(s) 517
Bsp1407I TGTACA 1 cut(s) 39
Bsp143I GATC 3 cut(s) 440, 520, 775
BspACI CCGC 2 cut(s) 540, 592
BspANI GGCC 1 cut(s) 543
BspLI GGNNCC 1 cut(s) 34
BspPI GGATC 1 cut(s) 770
BspT107I GGYRCC 1 cut(s) 32
BsrFI RCCGGY 1 cut(s) 598
BsrGI TGTACA 1 cut(s) 39
BsrI ACTGG 2 cut(s) 772, 821
BssAI RCCGGY 1 cut(s) 598
BssMI GATC 3 cut(s) 440, 520, 775
Bst2UI CCWGG 1 cut(s) 640
Bst4CI ACNGT 1 cut(s) 37
BstAUI TGTACA 1 cut(s) 39
BstBAI YACGTR 1 cut(s) 282
BstC8I GCNNGC 1 cut(s) 683
BstEII GGTNACC 1 cut(s) 829
BstENI CCTNNNNNAGG 1 cut(s) 522
BstF5I GGATG 4 cut(s) 135, 403, 648, 652
BstHHI GCGC 1 cut(s) 496
BstKTI GATC 3 cut(s) 443, 523, 778
BstMAI GTCTC 1 cut(s) 363
BstMBI GATC 3 cut(s) 440, 520, 775
BstMWI GCNNNNNNNGC 1 cut(s) 620
BstNI CCWGG 1 cut(s) 640
BstPI GGTNACC 1 cut(s) 829
BstSCI CCNGG 1 cut(s) 638
BstV1I GCAGC 2 cut(s) 68, 598
BstV2I GAAGAC 1 cut(s) 372
BsuRI GGCC 1 cut(s) 543
BtgZI GCGATG 1 cut(s) 695
BtsCI GGATG 4 cut(s) 135, 403, 648, 652
BtsIMutI CAGTG 1 cut(s) 828
Cac8I GCNNGC 1 cut(s) 683
CfoI GCGC 1 cut(s) 496
Cfr10I RCCGGY 1 cut(s) 598
Csp6I GTAC 5 cut(s) 33, 40, 290, 468, 636
CspAI ACCGGT 1 cut(s) 598
CviAII CATG 1 cut(s) 472
CviQI GTAC 5 cut(s) 33, 40, 290, 468, 636
DpnI GATC 3 cut(s) 442, 522, 777
DpnII GATC 3 cut(s) 440, 520, 775
DriI GACNNNNNGTC 1 cut(s) 376
Eam1105I GACNNNNNGTC 1 cut(s) 376
Eco91I GGTNACC 1 cut(s) 829
EcoNI CCTNNNNNAGG 1 cut(s) 522
EcoO65I GGTNACC 1 cut(s) 829
EcoRI GAATTC 1 cut(s) 9
EcoRII CCWGG 1 cut(s) 638
FaeI CATG 1 cut(s) 475
FatI CATG 1 cut(s) 471
FauI CCCGC 1 cut(s) 599
Fnu4HI GCNGC 3 cut(s) 57, 541, 612
FokI GGATG 4 cut(s) 122, 410, 655, 659
Fsp4HI GCNGC 3 cut(s) 57, 541, 612
FspBI CTAG 3 cut(s) 524, 717, 786
GlaI GCGC 1 cut(s) 495
GluI GCNGC 3 cut(s) 57, 541, 612
GsaI CCCAGC 1 cut(s) 783
HaeIII GGCC 1 cut(s) 543
HapII CCGG 1 cut(s) 599
HhaI GCGC 1 cut(s) 496
Hin1II CATG 1 cut(s) 475
Hin6I GCGC 1 cut(s) 494
HinP1I GCGC 1 cut(s) 494
HincII GTYRAC 1 cut(s) 604
HindII GTYRAC 1 cut(s) 604
HinfI GANTC 3 cut(s) 66, 706, 808
HpaII CCGG 1 cut(s) 599
HphI GGTGA 2 cut(s) 670, 823
Hpy166II GTNNAC 2 cut(s) 40, 604
Hpy188I TCNGA 2 cut(s) 573, 588
Hpy188III TCNNGA 4 cut(s) 208, 368, 438, 518
Hpy8I GTNNAC 2 cut(s) 40, 604
Hpy99I CGWCG 1 cut(s) 555
HpyAV CCTTC 2 cut(s) 95, 625
HpyCH4III ACNGT 1 cut(s) 37
HpyCH4IV ACGT 1 cut(s) 281
HpyCH4V TGCA 2 cut(s) 317, 337
HpyF10VI GCNNNNNNNGC 1 cut(s) 620
HpySE526I ACGT 1 cut(s) 281
Hsp92II CATG 1 cut(s) 475
HspAI GCGC 1 cut(s) 494
KpnI GGTACC 1 cut(s) 36
Kzo9I GATC 3 cut(s) 440, 520, 775
LmnI GCTCC 2 cut(s) 320, 520
Lsp1109I GCAGC 2 cut(s) 68, 598
LweI GCATC 1 cut(s) 265
MaeI CTAG 3 cut(s) 524, 717, 786
MaeII ACGT 1 cut(s) 281
MaeIII GTNAC 3 cut(s) 649, 788, 829
MalI GATC 3 cut(s) 442, 522, 777
MboI GATC 3 cut(s) 440, 520, 775
MboII GAAGA 5 cut(s) 75, 91, 372, 679, 682
MhlI GDGCHC 1 cut(s) 517
MluCI AATT 7 cut(s) 9, 116, 129, 485, 531, 626, 762
MmeI TCCRAC 1 cut(s) 91
MnlI CCTC 8 cut(s) 17, 259, 285, 361, 500, 594, 641, 819
MroXI GAANNNNTTC 2 cut(s) 70, 238
MseI TTAA 5 cut(s) 96, 123, 168, 375, 420
MslI CAYNNNNRTG 2 cut(s) 261, 656
MspA1I CMGCKG 1 cut(s) 59
MspI CCGG 1 cut(s) 599
MspR9I CCNGG 1 cut(s) 640
MvaI CCWGG 1 cut(s) 640
MwoI GCNNNNNNNGC 1 cut(s) 620
NdeII GATC 3 cut(s) 440, 520, 775
NlaIII CATG 1 cut(s) 475
NlaIV GGNNCC 1 cut(s) 34
NmuCI GTSAC 3 cut(s) 649, 788, 829
OliI CACNNNNGTG 1 cut(s) 656
PdmI GAANNNNTTC 2 cut(s) 70, 238
PfeI GAWTC 3 cut(s) 66, 706, 808
PinAI ACCGGT 1 cut(s) 598
PkrI GCNGC 3 cut(s) 58, 542, 613
Ppu21I YACGTR 1 cut(s) 282
PshBI ATTAAT 1 cut(s) 123
Psp6I CCWGG 1 cut(s) 638
PspEI GGTNACC 1 cut(s) 829
PspFI CCCAGC 1 cut(s) 779
PspGI CCWGG 1 cut(s) 638
PspN4I GGNNCC 1 cut(s) 34
PvuII CAGCTG 1 cut(s) 59
RsaI GTAC 5 cut(s) 34, 41, 291, 469, 637
RsaNI GTAC 5 cut(s) 33, 40, 290, 468, 636
RseI CAYNNNNRTG 2 cut(s) 261, 656
SaqAI TTAA 5 cut(s) 96, 123, 168, 375, 420
SatI GCNGC 3 cut(s) 57, 541, 612
Sau3AI GATC 3 cut(s) 440, 520, 775
ScrFI CCNGG 1 cut(s) 640
SduI GDGCHC 1 cut(s) 517
SfaNI GCATC 1 cut(s) 265
SmiMI CAYNNNNRTG 2 cut(s) 261, 656
Sse9I AATT 7 cut(s) 9, 116, 129, 485, 531, 626, 762
SsiI CCGC 2 cut(s) 540, 592
SspMI CTAG 3 cut(s) 524, 717, 786
StyD4I CCNGG 1 cut(s) 638
TaaI ACNGT 1 cut(s) 37
TaiI ACGT 1 cut(s) 284
TaqI TCGA 3 cut(s) 309, 367, 728
TaqII GACCGA 2 cut(s) 5, 543
TasI AATT 7 cut(s) 9, 116, 129, 485, 531, 626, 762
TatI WGTACW 1 cut(s) 39
TauI GCSGC 1 cut(s) 543
TfiI GAWTC 3 cut(s) 66, 706, 808
Tru1I TTAA 5 cut(s) 96, 123, 168, 375, 420
Tru9I TTAA 5 cut(s) 96, 123, 168, 375, 420
TscAI CASTG 1 cut(s) 828
TseFI GTSAC 3 cut(s) 649, 788, 829
TseI GCWGC 2 cut(s) 56, 611
Tsp45I GTSAC 3 cut(s) 649, 788, 829
TspDTI ATGAA 4 cut(s) 114, 141, 211, 318
TspGWI ACGGA 2 cut(s) 495, 623
TspRI CASTG 1 cut(s) 828
VspI ATTAAT 1 cut(s) 123
XagI CCTNNNNNAGG 1 cut(s) 522
XapI RAATTY 2 cut(s) 9, 116
XmnI GAANNNNTTC 2 cut(s) 70, 238
XspI CTAG 3 cut(s) 524, 717, 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.