Rorug06G0164300

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000169
Physical Location & Seq
Reverse (-)
23376869 .. 23381731
4863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0164300.1

Sequence Viewer

Length: 1371 bp
ATGGAGCTAGCTGATGAGCTACAGATCAATGGAGAGGAAGAGGGAGAGGACATGGACAGAGAGCCGTCTGCAGAGGCTCCTCGCAGAGAGCCTCATCTCTACCGGAACCACTTTGGAGGCATGGTGAGGAAGAAAGCCTATATTTTTGATGGGCACGGCGAATTTTACAATAAGGAATGGGATCTTACAGAGGGTAGAGGAAATGAGTTTTGTTGGTATCATGTAGAGCTTCCAAAAGGAAATCAGAAACTATCTCAATCTGCAGAACACCTCATTGGTGTTCTTTGCCCGCCTTTGAAACTACAGGACATTCTCTCGCTTGTCAGCAACGGACCCTTTTGTGGGCATGTCGATGGGGCTCTTGTATTCAGAGTCAACTCCCCAGGTCCTCCTGCCAGTGATTTCACATTTAGAATTGCTGCAAGAATTACTGAACACTCGGTGATTACTGTGTCTTTGGGCCGTGTCCCCAGATTGGGTTTCTCGCCAGTGGGCGAATCTCTTCTCTCGGAGATTCCTAGAGTGGAGAGTCCCTCTTATGTTAGAGGTGAGCAGAAGGAAAGGAGTGGGATTGTGATAAGGGAGCATGTTCTTGAGTTCTTATTGACGATGAATCATTCTGAAGAGGCCGATAATCCTGTGCCAAAATCTGTCTCCAATCTTGTGGTTCATATTATTGACACGCATGTTGATCACCTCCAAGATGTTGTGACTAAACTTGAAATAGAATTGGATTCCGTTGAGCTTGAGATGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTAGATGATAGAAGATTTCCTAAAATGCATCTAAATCTGCAGCGCCTCTTGCAGGTGATTGCTCATGGGGAGCAAGTTTTTCCTCGGGTCAAAGAAAAATGTTCTTCCAAACAATGGTTTTCCAGTGAAGATGTTAACTCTCTTGAAGAGCTGACTGGACGGTTGAGGAGGCTAAAGGATAATGTAGGGTTTATAGCAAATCGTGTCACGGCAATACAGGCTGGTCTAGACAGCTGGCAAGCTGAGCAAATAAACAAGAAACTATATTATCTCTCTTTCCTTTCTATCGTATTCCTTCCTCTATCCATCATTACTGGAGTGTTTGGCATGAATGTGGGCGGAGTTCCATGGACAGGACAAAACGACCCAACGTTGAAGAATGGTTTCCGTAATGTGATGTTACTTTGCATTGTTATGCTACTTCTGGCACTGCTCTGCTTCAGTTTTCCTGCTCTTTATACCCGTATAGTTACTTGGCAAAGGAGAAGAGTCTTGAGGAGAAGCTGGTCCCTCAACAGGAAGTCATTTCTCAGTAGAACCCATGGAATTGGAGTTCAAGAAAGAAGGGGCTACCTTCGGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

456

Amino Acids

51.92

Weight (kDa)

7.26

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CorA PF01544 211 - 409 1.8e-27 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 829
Acc36I ACCTGC 1 cut(s) 829
AccB7I CCANNNNNTGG 1 cut(s) 900
AciI CCGC 2 cut(s) 290, 1125
AclI AACGTT 1 cut(s) 1157
AclWI GGATC 1 cut(s) 189
AcsI RAATTY 1 cut(s) 161
AcuI CTGAAG 2 cut(s) 642, 1210
AdeI CACNNNGTG 1 cut(s) 442
AfiI CCNNNNNNNGG 8 cut(s) 341, 342, 475, 476, 838, 900, 1139, 1302
AgsI TTSAA 6 cut(s) 298, 722, 775, 932, 1162, 1343
AjnI CCWGG 1 cut(s) 382
AjuI GAANNNNNNNTTGG 2 cut(s) 258, 290
AloI GAACNNNNNNTCC 2 cut(s) 1323, 1355
AluBI AGCT 9 cut(s) 7, 11, 19, 229, 745, 937, 1020, 1028, 1290
AluI AGCT 9 cut(s) 7, 11, 19, 229, 745, 937, 1020, 1028, 1290
Alw26I GTCTC 1 cut(s) 658
AlwI GGATC 1 cut(s) 189
Ama87I CYCGRG 1 cut(s) 870
AoxI GGCC 2 cut(s) 460, 627
ApeKI GCWGC 2 cut(s) 419, 826
ApoI RAATTY 1 cut(s) 161
Asp700I GAANNNNTTC 2 cut(s) 501, 1169
AspLEI GCGC 1 cut(s) 831
AspS9I GGNCC 4 cut(s) 332, 386, 460, 1293
AsuHPI GGTGA 5 cut(s) 136, 454, 560, 686, 853
AsuNHI GCTAGC 1 cut(s) 7
AvaI CYCGRG 1 cut(s) 870
AvaII GGWCC 3 cut(s) 332, 386, 1293
BaeGI GKGCMC 1 cut(s) 156
BanII GRGCYC 1 cut(s) 361
BbvI GCAGC 2 cut(s) 406, 838
BccI CCATC 4 cut(s) 143, 347, 745, 1100
BceAI ACGGC 4 cut(s) 49, 172, 447, 1011
BciT130I CCWGG 1 cut(s) 384
BclI TGATCA 1 cut(s) 691
BcoDI GTCTC 1 cut(s) 658
BfaI CTAG 4 cut(s) 8, 519, 788, 1013
BfmI CTRYAG 5 cut(s) 20, 69, 261, 302, 824
BfoI RGCGCY 1 cut(s) 832
BfuAI ACCTGC 1 cut(s) 829
BisI GCNGC 2 cut(s) 420, 827
BlpI GCTNAGC 1 cut(s) 1029
BlsI GCNGC 2 cut(s) 421, 828
Bme1390I CCNGG 1 cut(s) 384
Bme18I GGWCC 3 cut(s) 332, 386, 1293
BmeT110I CYCGRG 1 cut(s) 870
BmgT120I GGNCC 4 cut(s) 332, 386, 460, 1293
BmiI GGNNCC 4 cut(s) 78, 107, 334, 1295
BmrFI CCNGG 1 cut(s) 384
BmsI GCATC 1 cut(s) 823
BmtI GCTAGC 1 cut(s) 11
BplI GAGNNNNNCTC 2 cut(s) 518, 550
BpmI CTGGAG 1 cut(s) 1122
Bpu1102I GCTNAGC 1 cut(s) 1029
BpuEI CTTGAG 3 cut(s) 614, 767, 1300
BsaJI CCNNGG 4 cut(s) 382, 869, 1133, 1327
BsaWI WCCGGW 1 cut(s) 102
BsaXI ACNNNNNCTCC 2 cut(s) 108, 138
Bsc4I CCNNNNNNNGG 8 cut(s) 341, 342, 475, 476, 838, 900, 1139, 1302
Bse1I ACTGG 5 cut(s) 396, 488, 909, 946, 1105
BseBI CCWGG 1 cut(s) 384
BseDI CCNNGG 4 cut(s) 382, 869, 1133, 1327
BseLI CCNNNNNNNGG 8 cut(s) 341, 342, 475, 476, 838, 900, 1139, 1302
BseMII CTCAG 2 cut(s) 1020, 1330
BseNI ACTGG 5 cut(s) 396, 488, 909, 946, 1105
BseRI GAGGAG 3 cut(s) 69, 967, 1297
BseSI GKGCMC 1 cut(s) 156
BseXI GCAGC 2 cut(s) 406, 838
BshFI GGCC 2 cut(s) 462, 629
BsiHKCI CYCGRG 1 cut(s) 870
BsiSI CCGG 1 cut(s) 103
BslFI GGGAC 3 cut(s) 452, 516, 1279
BslI CCNNNNNNNGG 8 cut(s) 341, 342, 475, 476, 838, 900, 1139, 1302
BsmAI GTCTC 1 cut(s) 658
BsmFI GGGAC 3 cut(s) 452, 516, 1279
BsnI GGCC 2 cut(s) 462, 629
BsoBI CYCGRG 1 cut(s) 870
Bsp1286I GDGCHC 2 cut(s) 156, 361
Bsp143I GATC 3 cut(s) 24, 181, 691
Bsp1720I GCTNAGC 1 cut(s) 1029
Bsp19I CCATGG 2 cut(s) 1133, 1327
BspACI CCGC 2 cut(s) 290, 1125
BspANI GGCC 2 cut(s) 462, 629
BspCNI CTCAG 2 cut(s) 1021, 1329
BspLI GGNNCC 4 cut(s) 78, 107, 334, 1295
BspMAI CTGCAG 3 cut(s) 73, 265, 828
BspMI ACCTGC 1 cut(s) 829
BspOI GCTAGC 1 cut(s) 11
BspPI GGATC 1 cut(s) 189
BspQI GCTCTTC 1 cut(s) 927
BsrI ACTGG 5 cut(s) 396, 488, 909, 946, 1105
BssECI CCNNGG 4 cut(s) 382, 869, 1133, 1327
BssMI GATC 3 cut(s) 24, 181, 691
BssT1I CCWWGG 2 cut(s) 1133, 1327
Bst2UI CCWGG 1 cut(s) 384
Bst4CI ACNGT 2 cut(s) 451, 948
Bst6I CTCTTC 5 cut(s) 33, 507, 618, 927, 1267
BstC8I GCNNGC 4 cut(s) 9, 290, 1022, 1026
BstDEI CTNAG 2 cut(s) 1029, 1316
BstDSI CCRYGG 2 cut(s) 1133, 1327
BstENI CCTNNNNNAGG 1 cut(s) 836
BstH2I RGCGCY 1 cut(s) 832
BstHHI GCGC 1 cut(s) 831
BstKTI GATC 3 cut(s) 27, 184, 694
BstMAI GTCTC 1 cut(s) 658
BstMBI GATC 3 cut(s) 24, 181, 691
BstMWI GCNNNNNNNGC 3 cut(s) 835, 1004, 1030
BstNI CCWGG 1 cut(s) 384
BstNSI RCATGY 3 cut(s) 350, 590, 689
BstSCI CCNGG 1 cut(s) 382
BstSFI CTRYAG 5 cut(s) 20, 69, 261, 302, 824
BstSLI GKGCMC 1 cut(s) 156
BstV1I GCAGC 2 cut(s) 406, 838
BstX2I RGATCY 1 cut(s) 181
BstXI CCANNNNNNTGG 2 cut(s) 664, 1334
BstYI RGATCY 1 cut(s) 181
BsuRI GGCC 2 cut(s) 462, 629
BtgI CCRYGG 2 cut(s) 1133, 1327
BtsI GCAGTG 1 cut(s) 1214
BtsIMutI CAGTG 4 cut(s) 403, 495, 916, 1214
BveI ACCTGC 1 cut(s) 829
Cac8I GCNNGC 4 cut(s) 9, 290, 1022, 1026
CfoI GCGC 1 cut(s) 831
Cfr13I GGNCC 4 cut(s) 332, 386, 460, 1293
DdeI CTNAG 2 cut(s) 1029, 1316
DpnI GATC 3 cut(s) 26, 183, 693
DpnII GATC 3 cut(s) 24, 181, 691
DraIII CACNNNGTG 1 cut(s) 442
Eam1104I CTCTTC 5 cut(s) 33, 507, 618, 927, 1267
EarI CTCTTC 5 cut(s) 33, 507, 618, 927, 1267
EciI GGCGGA 1 cut(s) 1140
Eco130I CCWWGG 2 cut(s) 1133, 1327
Eco24I GRGCYC 1 cut(s) 361
Eco47I GGWCC 3 cut(s) 332, 386, 1293
Eco57I CTGAAG 2 cut(s) 642, 1210
Eco88I CYCGRG 1 cut(s) 870
EcoNI CCTNNNNNAGG 1 cut(s) 836
EcoO109I RGGNCCY 1 cut(s) 386
EcoRII CCWGG 1 cut(s) 382
EcoT14I CCWWGG 2 cut(s) 1133, 1327
EcoT22I ATGCAT 1 cut(s) 816
EcoT38I GRGCYC 1 cut(s) 361
ErhI CCWWGG 2 cut(s) 1133, 1327
FaqI GGGAC 3 cut(s) 452, 516, 1279
FauI CCCGC 1 cut(s) 297
FbaI TGATCA 1 cut(s) 691
Fnu4HI GCNGC 2 cut(s) 420, 827
FriOI GRGCYC 1 cut(s) 361
Fsp4HI GCNGC 2 cut(s) 420, 827
FspBI CTAG 4 cut(s) 8, 519, 788, 1013
GlaI GCGC 1 cut(s) 830
GluI GCNGC 2 cut(s) 420, 827
GsuI CTGGAG 1 cut(s) 1122
HaeII RGCGCY 1 cut(s) 832
HaeIII GGCC 2 cut(s) 462, 629
HapII CCGG 1 cut(s) 103
HhaI GCGC 1 cut(s) 831
Hin6I GCGC 1 cut(s) 829
HinP1I GCGC 1 cut(s) 829
HincII GTYRAC 2 cut(s) 376, 922
HindII GTYRAC 2 cut(s) 376, 922
HinfI GANTC 7 cut(s) 372, 497, 514, 529, 613, 734, 1275
HpaI GTTAAC 1 cut(s) 922
HpaII CCGG 1 cut(s) 103
HphI GGTGA 5 cut(s) 136, 454, 560, 686, 853
Hpy166II GTNNAC 2 cut(s) 376, 922
Hpy188I TCNGA 4 cut(s) 246, 371, 511, 622
Hpy188III TCNNGA 5 cut(s) 593, 929, 1013, 1279, 1343
Hpy8I GTNNAC 2 cut(s) 376, 922
HpyAV CCTTC 4 cut(s) 550, 1091, 1344, 1370
HpyCH4III ACNGT 2 cut(s) 451, 948
HpyCH4IV ACGT 1 cut(s) 1157
HpyCH4V TGCA 7 cut(s) 71, 263, 422, 814, 826, 838, 1194
HpyF10VI GCNNNNNNNGC 3 cut(s) 835, 1004, 1030
HpyF3I CTNAG 2 cut(s) 1029, 1316
HpySE526I ACGT 1 cut(s) 1157
HspAI GCGC 1 cut(s) 829
Ksp22I TGATCA 1 cut(s) 691
KspAI GTTAAC 1 cut(s) 922
Kzo9I GATC 3 cut(s) 24, 181, 691
LguI GCTCTTC 1 cut(s) 927
LmnI GCTCC 4 cut(s) 4, 82, 583, 856
Lsp1109I GCAGC 2 cut(s) 406, 838
LweI GCATC 1 cut(s) 823
MaeI CTAG 4 cut(s) 8, 519, 788, 1013
MaeII ACGT 1 cut(s) 1157
MaeIII GTNAC 4 cut(s) 709, 991, 1185, 1255
MalI GATC 3 cut(s) 26, 183, 693
MboI GATC 3 cut(s) 24, 181, 691
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 2 cut(s) 156, 361
MluCI AATT 5 cut(s) 161, 414, 426, 728, 1332
MlyI GAGTC 3 cut(s) 381, 538, 1284
Mph1103I ATGCAT 1 cut(s) 816
MroXI GAANNNNTTC 2 cut(s) 501, 1169
MseI TTAA 1 cut(s) 921
MslI CAYNNNNRTG 3 cut(s) 351, 1118, 1199
MspA1I CMGCKG 1 cut(s) 1020
MspI CCGG 1 cut(s) 103
MspR9I CCNGG 1 cut(s) 384
MvaI CCWGG 1 cut(s) 384
MwoI GCNNNNNNNGC 3 cut(s) 835, 1004, 1030
NcoI CCATGG 2 cut(s) 1133, 1327
NdeII GATC 3 cut(s) 24, 181, 691
NheI GCTAGC 1 cut(s) 7
NlaIV GGNNCC 4 cut(s) 78, 107, 334, 1295
NmuCI GTSAC 2 cut(s) 709, 991
NsiI ATGCAT 1 cut(s) 816
NspI RCATGY 3 cut(s) 350, 590, 689
PaqCI CACCTGC 1 cut(s) 829
PciSI GCTCTTC 1 cut(s) 927
PdmI GAANNNNTTC 2 cut(s) 501, 1169
PfeI GAWTC 4 cut(s) 497, 514, 613, 734
PflMI CCANNNNNTGG 1 cut(s) 900
PkrI GCNGC 2 cut(s) 421, 828
PleI GAGTC 3 cut(s) 380, 537, 1283
PpsI GAGTC 3 cut(s) 380, 537, 1283
PpuMI RGGWCCY 1 cut(s) 386
Psp1406I AACGTT 1 cut(s) 1157
Psp5II RGGWCCY 1 cut(s) 386
Psp6I CCWGG 1 cut(s) 382
PspGI CCWGG 1 cut(s) 382
PspN4I GGNNCC 4 cut(s) 78, 107, 334, 1295
PspPI GGNCC 4 cut(s) 332, 386, 460, 1293
PspPPI RGGWCCY 1 cut(s) 386
PstI CTGCAG 3 cut(s) 73, 265, 828
PsuI RGATCY 1 cut(s) 181
PvuII CAGCTG 1 cut(s) 1020
RseI CAYNNNNRTG 3 cut(s) 351, 1118, 1199
SapI GCTCTTC 1 cut(s) 927
SaqAI TTAA 1 cut(s) 921
SatI GCNGC 2 cut(s) 420, 827
Sau3AI GATC 3 cut(s) 24, 181, 691
Sau96I GGNCC 4 cut(s) 332, 386, 460, 1293
SchI GAGTC 3 cut(s) 381, 538, 1284
ScrFI CCNGG 1 cut(s) 384
SduI GDGCHC 2 cut(s) 156, 361
SfaNI GCATC 1 cut(s) 823
SfcI CTRYAG 5 cut(s) 20, 69, 261, 302, 824
SinI GGWCC 3 cut(s) 332, 386, 1293
SmiMI CAYNNNNRTG 3 cut(s) 351, 1118, 1199
SmlI CTYRAG 3 cut(s) 593, 746, 1279
SmoI CTYRAG 3 cut(s) 593, 746, 1279
Sse9I AATT 5 cut(s) 161, 414, 426, 728, 1332
SsiI CCGC 2 cut(s) 290, 1125
SspMI CTAG 4 cut(s) 8, 519, 788, 1013
StyD4I CCNGG 1 cut(s) 382
StyI CCWWGG 2 cut(s) 1133, 1327
TaaI ACNGT 2 cut(s) 451, 948
TaiI ACGT 1 cut(s) 1160
TaqI TCGA 1 cut(s) 351
TasI AATT 5 cut(s) 161, 414, 426, 728, 1332
TfiI GAWTC 4 cut(s) 497, 514, 613, 734
Tru1I TTAA 1 cut(s) 921
Tru9I TTAA 1 cut(s) 921
TscAI CASTG 4 cut(s) 403, 495, 916, 1221
TseFI GTSAC 2 cut(s) 709, 991
TseI GCWGC 2 cut(s) 419, 826
Tsp45I GTSAC 2 cut(s) 709, 991
TspDTI ATGAA 3 cut(s) 626, 659, 1130
TspGWI ACGGA 3 cut(s) 345, 727, 1163
TspRI CASTG 4 cut(s) 403, 495, 916, 1221
Van91I CCANNNNNTGG 1 cut(s) 900
VpaK11BI GGWCC 3 cut(s) 332, 386, 1293
XagI CCTNNNNNAGG 1 cut(s) 836
XapI RAATTY 1 cut(s) 161
XbaI TCTAGA 1 cut(s) 1012
XceI RCATGY 3 cut(s) 350, 590, 689
XmnI GAANNNNTTC 2 cut(s) 501, 1169
XspI CTAG 4 cut(s) 8, 519, 788, 1013
Zsp2I ATGCAT 1 cut(s) 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.