Rorug05G0235300

Protein of unknown function (DUF1279)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000169
Physical Location & Seq
Forward (+)
24669166 .. 24675052
5887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0235300.1

Sequence Viewer

Length: 1374 bp
ATGAAAGGAAAAGATGCAAATAGAGCCCTACTTACTCCTCCTCCCCATCTTCATACTGAGTCATTTACTGTTGTTCATGGAAATTCCCCTCCATTGGCCCATCAATGTGAAAATTTTGCATTTCCTCCTCCTCCTCCTTCATCTGGTCGTAAACGAAGTGGACCTCGCCCGTGTCCAGTATGTTATCTCCCTGTGGAGCAGGCTATAGCTAGTATGCCAAGTTCTTCTTCAGAATCACCTGTACTACATAATTTGACATATGTTTATGATGAAAATCCCACTAGAACTGAACGACATGGAGGTTCTGAATTTGGTGGATTTCCAACTCTGAGACAGAGAAATGATTCATATGATATAAAAGAATCCATGACGGTCCACTGTGGATTTGTGAAAGGTAATAAACCTGGTGACCAGTCTGGATTTGATGTTGATGAAGCTGACCTTATGGAGTTAGAGACGTCCCATGAGATAATTGTTGCGTCAGCTGTCTTTGGAAACTATGACATAATACAGCAGCCAACAAACATTAGTGAGTTTTCGAGGAAAAATGTTCCATTCTACATGTTTATTGATGAAGAGACTGAAGCTTATATGAAGAATTCCAGTGTCTTGGGAAACAGTAGGAAAGTAGGATTATGGAGAGTTATTGTTGTCCGTAATGTTCCTTACACTGATGCAAGACGCAATGGAAAGATTCCAAAGCTTCTATTGCACAGGCTTTTCCCCAATGTCAGATATTCTGTATGGATTGATGGAAAGCTTCAGCTTGTTGTGGATCCTTATCAGGTCCTTGAGAGGTTCTTGTGGCGTCAGAATGCAAATTTTGCAATCTCAAAGCACTATAGACGGTATGATGTGTTTGAAGAGGCGGAAGCTAACAGAGCTGCTGGGAAGTACGATAATTCCTCCATTAATGAGCAGGTTGACTTCTATATCAAGGAGGGTTTACAACCTTACTCTGAGGCTAAGCTTCCAATAACGAGTGATGTTCCTGAAGGTTGTGTGATCATAAAGGAACACATTCCCATTACAAATTTATTCACCTGTAATTGGTTCAATGAAGTTGATCGTTTTACCTCCAGGGATCAGTTAAGCTTTTCCACAGTGAGGGATAAAATCATGGGAAAAGTTGATTGGAGCATTAATATGTTTTTGGATTGTGAAAGGCGCAACTTTGTAATTCAGGCATACCACAGAGAGTTGCTGGAGCAGATGCCTCCTCCCCATCCTCCGAGGGTTGTGATTCGTCGTACACCAGCTTTGCCTCATGTTATCATATCTGTAAAGACTCCACCTGGGAAGAAGCGTGGACGAGGGGATAAGAAGCGCCATCGGAAGGTTGTTGCTGTTAGTAGAGACAACATGCAATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1279

Protein Analysis

457

Amino Acids

52.3

Weight (kDa)

8.89

Isoelectric Point (pI)

51.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TOD1_MUCI70 PF04765 85 - 398 7.7e-148 TOD1/MUCI70, glycosyltransferase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 461
Acc36I ACCTGC 1 cut(s) 910
AciI CCGC 1 cut(s) 869
AclWI GGATC 3 cut(s) 770, 783, 1092
AcsI RAATTY 6 cut(s) 82, 112, 308, 598, 820, 1033
AcuI CTGAAG 4 cut(s) 213, 603, 746, 1014
AcyI GRCGYC 2 cut(s) 458, 808
AfaI GTAC 3 cut(s) 243, 896, 1252
AfiI CCNNNNNNNGG 5 cut(s) 94, 143, 1050, 1107, 1336
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 2 cut(s) 863, 1057
AjnI CCWGG 3 cut(s) 403, 1079, 1294
AjuI GAANNNNNNNTTGG 4 cut(s) 211, 243, 1117, 1149
Alw26I GTCTC 4 cut(s) 325, 449, 572, 1350
AlwI GGATC 3 cut(s) 770, 783, 1092
AoxI GGCC 1 cut(s) 96
ApeKI GCWGC 2 cut(s) 514, 884
ApoI RAATTY 6 cut(s) 82, 112, 308, 598, 820, 1033
AseI ATTAAT 2 cut(s) 912, 1143
Asp700I GAANNNNTTC 2 cut(s) 343, 1020
AspLEI GCGC 2 cut(s) 1170, 1329
AspS9I GGNCC 4 cut(s) 97, 161, 373, 787
AsuHPI GGTGA 3 cut(s) 228, 419, 1033
AvaII GGWCC 3 cut(s) 161, 373, 787
BamHI GGATCC 1 cut(s) 775
BanII GRGCYC 1 cut(s) 28
BbvI GCAGC 2 cut(s) 526, 871
BccI CCATC 5 cut(s) 54, 108, 746, 1233, 1338
BciT130I CCWGG 3 cut(s) 405, 1081, 1296
BclI TGATCA 1 cut(s) 1005
BcoDI GTCTC 4 cut(s) 325, 449, 572, 1350
BfaI CTAG 2 cut(s) 210, 282
BfmI CTRYAG 2 cut(s) 204, 841
BfoI RGCGCY 1 cut(s) 1330
BfuAI ACCTGC 1 cut(s) 910
BisI GCNGC 2 cut(s) 515, 885
BlpI GCTNAGC 1 cut(s) 966
BlsI GCNGC 2 cut(s) 516, 886
Bme1390I CCNGG 3 cut(s) 405, 1081, 1296
Bme18I GGWCC 3 cut(s) 161, 373, 787
BmgT120I GGNCC 4 cut(s) 97, 161, 373, 787
BmiI GGNNCC 1 cut(s) 777
BmrFI CCNGG 3 cut(s) 405, 1081, 1296
BmsI GCATC 3 cut(s) 4, 664, 1203
BpmI CTGGAG 2 cut(s) 1063, 1226
Bpu1102I GCTNAGC 1 cut(s) 966
BpuEI CTTGAG 1 cut(s) 812
BsaBI GATNNNNATC 2 cut(s) 273, 780
BsaHI GRCGYC 2 cut(s) 458, 808
BsaJI CCNNGG 3 cut(s) 1080, 1232, 1295
BsaXI ACNNNNNCTCC 2 cut(s) 25, 55
Bsc4I CCNNNNNNNGG 5 cut(s) 94, 143, 1050, 1107, 1336
Bse1I ACTGG 3 cut(s) 176, 412, 603
Bse3DI GCAATG 1 cut(s) 691
Bse8I GATNNNNATC 2 cut(s) 273, 780
BseBI CCWGG 3 cut(s) 405, 1081, 1296
BseDI CCNNGG 3 cut(s) 1080, 1232, 1295
BseGI GGATG 1 cut(s) 1225
BseJI GATNNNNATC 2 cut(s) 273, 780
BseLI CCNNNNNNNGG 5 cut(s) 94, 143, 1050, 1107, 1336
BseMI GCAATG 1 cut(s) 691
BseMII CTCAG 3 cut(s) 48, 320, 951
BseNI ACTGG 3 cut(s) 176, 412, 603
BseRI GAGGAG 6 cut(s) 27, 30, 117, 120, 123, 1209
BseXI GCAGC 2 cut(s) 526, 871
BseYI CCCAGC 1 cut(s) 887
BshFI GGCC 1 cut(s) 98
BslFI GGGAC 1 cut(s) 445
BslI CCNNNNNNNGG 5 cut(s) 94, 143, 1050, 1107, 1336
BsmAI GTCTC 4 cut(s) 325, 449, 572, 1350
BsmBI CGTCTC 1 cut(s) 449
BsmFI GGGAC 1 cut(s) 445
BsmI GAATGC 1 cut(s) 820
BsnI GGCC 1 cut(s) 98
Bsp1286I GDGCHC 1 cut(s) 28
Bsp143I GATC 4 cut(s) 775, 1005, 1066, 1084
Bsp1720I GCTNAGC 1 cut(s) 966
BspACI CCGC 1 cut(s) 869
BspANI GGCC 1 cut(s) 98
BspCNI CTCAG 3 cut(s) 49, 321, 952
BspLI GGNNCC 1 cut(s) 777
BspMI ACCTGC 1 cut(s) 910
BspPI GGATC 3 cut(s) 770, 783, 1092
BsrDI GCAATG 1 cut(s) 691
BsrI ACTGG 3 cut(s) 176, 412, 603
BssECI CCNNGG 3 cut(s) 1080, 1232, 1295
BssMI GATC 4 cut(s) 775, 1005, 1066, 1084
BssNI GRCGYC 2 cut(s) 458, 808
Bst2UI CCWGG 3 cut(s) 405, 1081, 1296
Bst4CI ACNGT 6 cut(s) 70, 373, 380, 620, 849, 1105
Bst6I CTCTTC 2 cut(s) 570, 858
BstACI GRCGYC 2 cut(s) 458, 808
BstAPI GCANNNNNTGC 1 cut(s) 824
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 4 cut(s) 57, 329, 960, 966
BstEII GGTNACC 1 cut(s) 407
BstF5I GGATG 1 cut(s) 1225
BstH2I RGCGCY 1 cut(s) 1330
BstHHI GCGC 2 cut(s) 1170, 1329
BstKTI GATC 4 cut(s) 778, 1008, 1069, 1087
BstMAI GTCTC 4 cut(s) 325, 449, 572, 1350
BstMBI GATC 4 cut(s) 775, 1005, 1066, 1084
BstMWI GCNNNNNNNGC 4 cut(s) 23, 709, 824, 881
BstNI CCWGG 3 cut(s) 405, 1081, 1296
BstNSI RCATGY 2 cut(s) 565, 1366
BstPI GGTNACC 1 cut(s) 407
BstSCI CCNGG 3 cut(s) 403, 1079, 1294
BstSFI CTRYAG 2 cut(s) 204, 841
BstV1I GCAGC 2 cut(s) 526, 871
BstX2I RGATCY 1 cut(s) 775
BstXI CCANNNNNNTGG 1 cut(s) 610
BstYI RGATCY 1 cut(s) 775
BsuRI GGCC 1 cut(s) 98
BtsCI GGATG 1 cut(s) 1225
BtsIMutI CAGTG 4 cut(s) 376, 610, 669, 1110
BveI ACCTGC 1 cut(s) 910
Cac8I GCNNGC 1 cut(s) 201
CfoI GCGC 2 cut(s) 1170, 1329
Cfr13I GGNCC 4 cut(s) 97, 161, 373, 787
CseI GACGC 3 cut(s) 468, 690, 797
CsiI ACCWGGT 1 cut(s) 403
Csp6I GTAC 3 cut(s) 242, 895, 1251
CviAII CATG 8 cut(s) 77, 296, 367, 464, 562, 1120, 1268, 1363
CviQI GTAC 3 cut(s) 242, 895, 1251
DdeI CTNAG 4 cut(s) 57, 329, 960, 966
DpnI GATC 4 cut(s) 777, 1007, 1068, 1086
DpnII GATC 4 cut(s) 775, 1005, 1066, 1084
Eam1104I CTCTTC 2 cut(s) 570, 858
EarI CTCTTC 2 cut(s) 570, 858
EciI GGCGGA 1 cut(s) 884
Eco24I GRGCYC 1 cut(s) 28
Eco47I GGWCC 3 cut(s) 161, 373, 787
Eco57I CTGAAG 4 cut(s) 213, 603, 746, 1014
Eco91I GGTNACC 1 cut(s) 407
EcoO109I RGGNCCY 1 cut(s) 787
EcoO65I GGTNACC 1 cut(s) 407
EcoRI GAATTC 1 cut(s) 598
EcoRII CCWGG 3 cut(s) 403, 1079, 1294
EcoT38I GRGCYC 1 cut(s) 28
Esp3I CGTCTC 1 cut(s) 449
FaeI CATG 8 cut(s) 80, 299, 370, 467, 565, 1123, 1271, 1366
FalI AAGNNNNNCTT 4 cut(s) 211, 243, 426, 458
FaqI GGGAC 1 cut(s) 445
FatI CATG 8 cut(s) 76, 295, 366, 463, 561, 1119, 1267, 1362
FauNDI CATATG 2 cut(s) 259, 349
FbaI TGATCA 1 cut(s) 1005
Fnu4HI GCNGC 2 cut(s) 515, 885
FokI GGATG 1 cut(s) 1212
FriOI GRGCYC 1 cut(s) 28
Fsp4HI GCNGC 2 cut(s) 515, 885
FspBI CTAG 2 cut(s) 210, 282
GlaI GCGC 2 cut(s) 1169, 1328
GluI GCNGC 2 cut(s) 515, 885
GsaI CCCAGC 1 cut(s) 891
GsuI CTGGAG 2 cut(s) 1063, 1226
HaeII RGCGCY 1 cut(s) 1330
HaeIII GGCC 1 cut(s) 98
HgaI GACGC 3 cut(s) 468, 690, 797
HhaI GCGC 2 cut(s) 1170, 1329
Hin1I GRCGYC 2 cut(s) 458, 808
Hin1II CATG 8 cut(s) 80, 299, 370, 467, 565, 1123, 1271, 1366
Hin6I GCGC 2 cut(s) 1168, 1327
HinP1I GCGC 2 cut(s) 1168, 1327
HincII GTYRAC 1 cut(s) 925
HindII GTYRAC 1 cut(s) 925
HindIII AAGCTT 5 cut(s) 585, 701, 758, 968, 1093
HinfI GANTC 7 cut(s) 59, 233, 344, 362, 694, 1243, 1288
HphI GGTGA 3 cut(s) 228, 419, 1033
Hpy166II GTNNAC 7 cut(s) 152, 161, 376, 925, 947, 1253, 1310
Hpy188I TCNGA 8 cut(s) 232, 307, 330, 734, 813, 961, 1233, 1335
Hpy188III TCNNGA 2 cut(s) 417, 992
Hpy8I GTNNAC 7 cut(s) 152, 161, 376, 925, 947, 1253, 1310
Hpy99I CGWCG 1 cut(s) 1251
HpyAV CCTTC 3 cut(s) 147, 989, 1330
HpyCH4III ACNGT 6 cut(s) 70, 373, 380, 620, 849, 1105
HpyCH4IV ACGT 1 cut(s) 458
HpyCH4V TGCA 7 cut(s) 17, 119, 677, 712, 818, 827, 1366
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 709, 824, 881
HpyF3I CTNAG 4 cut(s) 57, 329, 960, 966
HpySE526I ACGT 1 cut(s) 458
Hsp92I GRCGYC 2 cut(s) 458, 808
Hsp92II CATG 8 cut(s) 80, 299, 370, 467, 565, 1123, 1271, 1366
HspAI GCGC 2 cut(s) 1168, 1327
Ksp22I TGATCA 1 cut(s) 1005
Kzo9I GATC 4 cut(s) 775, 1005, 1066, 1084
LmnI GCTCC 3 cut(s) 196, 1137, 1207
Lsp1109I GCAGC 2 cut(s) 526, 871
LweI GCATC 3 cut(s) 4, 664, 1203
MabI ACCWGGT 1 cut(s) 403
MaeI CTAG 2 cut(s) 210, 282
MaeII ACGT 1 cut(s) 458
MaeIII GTNAC 1 cut(s) 407
MalI GATC 4 cut(s) 777, 1007, 1068, 1086
MboI GATC 4 cut(s) 775, 1005, 1066, 1084
MboII GAAGA 7 cut(s) 41, 216, 219, 587, 607, 875, 1312
MflI RGATCY 1 cut(s) 775
MhlI GDGCHC 1 cut(s) 28
MlyI GAGTC 2 cut(s) 68, 1282
MmeI TCCRAC 1 cut(s) 347
MroXI GAANNNNTTC 2 cut(s) 343, 1020
MseI TTAA 3 cut(s) 912, 1091, 1143
MslI CAYNNNNRTG 2 cut(s) 105, 1145
MspA1I CMGCKG 1 cut(s) 485
MspR9I CCNGG 3 cut(s) 405, 1081, 1296
Mva1269I GAATGC 1 cut(s) 820
MvaI CCWGG 3 cut(s) 405, 1081, 1296
MwoI GCNNNNNNNGC 4 cut(s) 23, 709, 824, 881
NdeI CATATG 2 cut(s) 259, 349
NdeII GATC 4 cut(s) 775, 1005, 1066, 1084
NlaIII CATG 8 cut(s) 80, 299, 370, 467, 565, 1123, 1271, 1366
NlaIV GGNNCC 1 cut(s) 777
NmuCI GTSAC 1 cut(s) 407
NspI RCATGY 2 cut(s) 565, 1366
PciI ACATGT 1 cut(s) 561
PctI GAATGC 1 cut(s) 820
PdmI GAANNNNTTC 2 cut(s) 343, 1020
PfeI GAWTC 5 cut(s) 233, 344, 362, 694, 1243
PkrI GCNGC 2 cut(s) 516, 886
PleI GAGTC 2 cut(s) 67, 1282
PpsI GAGTC 2 cut(s) 67, 1282
PpuMI RGGWCCY 1 cut(s) 787
PscI ACATGT 1 cut(s) 561
PshBI ATTAAT 2 cut(s) 912, 1143
Psp5II RGGWCCY 1 cut(s) 787
Psp6I CCWGG 3 cut(s) 403, 1079, 1294
PspEI GGTNACC 1 cut(s) 407
PspFI CCCAGC 1 cut(s) 887
PspGI CCWGG 3 cut(s) 403, 1079, 1294
PspN4I GGNNCC 1 cut(s) 777
PspPI GGNCC 4 cut(s) 97, 161, 373, 787
PspPPI RGGWCCY 1 cut(s) 787
PsrI GAACNNNNNNTAC 2 cut(s) 205, 237
PsuI RGATCY 1 cut(s) 775
PvuII CAGCTG 1 cut(s) 485
RsaI GTAC 3 cut(s) 243, 896, 1252
RsaNI GTAC 3 cut(s) 242, 895, 1251
RseI CAYNNNNRTG 2 cut(s) 105, 1145
SaqAI TTAA 3 cut(s) 912, 1091, 1143
SatI GCNGC 2 cut(s) 515, 885
Sau3AI GATC 4 cut(s) 775, 1005, 1066, 1084
Sau96I GGNCC 4 cut(s) 97, 161, 373, 787
SchI GAGTC 2 cut(s) 68, 1282
ScrFI CCNGG 3 cut(s) 405, 1081, 1296
SduI GDGCHC 1 cut(s) 28
SexAI ACCWGGT 1 cut(s) 403
SfaNI GCATC 3 cut(s) 4, 664, 1203
SfcI CTRYAG 2 cut(s) 204, 841
SinI GGWCC 3 cut(s) 161, 373, 787
SmiMI CAYNNNNRTG 2 cut(s) 105, 1145
SmlI CTYRAG 1 cut(s) 791
SmoI CTYRAG 1 cut(s) 791
SsiI CCGC 1 cut(s) 869
SspMI CTAG 2 cut(s) 210, 282
StyD4I CCNGG 3 cut(s) 403, 1079, 1294
TaaI ACNGT 6 cut(s) 70, 373, 380, 620, 849, 1105
TaiI ACGT 1 cut(s) 461
TaqI TCGA 1 cut(s) 539
TatI WGTACW 1 cut(s) 241
TfiI GAWTC 5 cut(s) 233, 344, 362, 694, 1243
Tru1I TTAA 3 cut(s) 912, 1091, 1143
Tru9I TTAA 3 cut(s) 912, 1091, 1143
TscAI CASTG 4 cut(s) 383, 610, 676, 1110
TseFI GTSAC 1 cut(s) 407
TseI GCWGC 2 cut(s) 514, 884
Tsp45I GTSAC 1 cut(s) 407
TspGWI ACGGA 1 cut(s) 644
TspRI CASTG 4 cut(s) 383, 610, 676, 1110
VpaK11BI GGWCC 3 cut(s) 161, 373, 787
VspI ATTAAT 2 cut(s) 912, 1143
XapI RAATTY 6 cut(s) 82, 112, 308, 598, 820, 1033
XceI RCATGY 2 cut(s) 565, 1366
XmnI GAANNNNTTC 2 cut(s) 343, 1020
XspI CTAG 2 cut(s) 210, 282
ZraI GACGTC 1 cut(s) 459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.