Rmu_sc0002129.1_g000039

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002129.1
OG0000169
Physical Location & Seq
Forward (+)
156179 .. 156910
732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002129.1_g000039.1.cds

Sequence Viewer

Length: 732 bp
atggcctctattgatgatgttacagccagttttgtagcctctctcgccctcgttgaggggggaaaagcccaggacctggggaagatcggtggcggccttgtgtgccgatcttctcaatccttcctgcttggtaagcctttaactcgtaaggtagtggatcccaaggccttcaaggcccatttccattgtacctggattgtggacatagagtttagggttcgggacaaacctggggatgttttcctgttctcctttgattcgttgtgcgaccgcaacaaggtactccgtggtggggtttggtgttacgatcgagccccagttttttttgaagaatatgatggagtcaagcctctccaggagatccagtttaaacatatccgcgtctgggttagggtttctagcatccctcccttgtatgaagagccggagaactttaccctcattggtaatctcttagggggttttttggactttgataagaaggagtttaagaagggtgtcatccggatcttgattattcatgacatctcaaagccggtcctgttggagcgtcgggttttcttggatatcggagtggaaccggtgctgcagtttcattttgagcacctgaaagggaggtgtttacagtgtggtctcttcagacatgctgggatctcatgtcagacgctgaatgttgctatcacggcgcctaaggttttaagttttccggggctttcatcctcgggggtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

243

Amino Acids

27.21

Weight (kDa)

8.65

Isoelectric Point (pI)

39.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 685
AccB7I CCANNNNNTGG 1 cut(s) 76
AccII CGCG 1 cut(s) 381
AccIII TCCGGA 1 cut(s) 504
AciI CCGC 3 cut(s) 93, 271, 379
AclWI GGATC 5 cut(s) 152, 165, 355, 515, 659
AcuI CTGAAG 1 cut(s) 622
AcyI GRCGYC 1 cut(s) 686
AfaI GTAC 2 cut(s) 190, 282
AfiI CCNNNNNNNGG 5 cut(s) 55, 76, 277, 292, 385
AgeI ACCGGT 1 cut(s) 580
AgsI TTSAA 2 cut(s) 172, 329
AjnI CCWGG 5 cut(s) 69, 75, 191, 229, 354
Alw21I GWGCWC 1 cut(s) 606
Alw26I GTCTC 1 cut(s) 638
AlwI GGATC 5 cut(s) 152, 165, 355, 515, 659
AlwNI CAGNNNCTG 2 cut(s) 76, 667
Ama87I CYCGRG 1 cut(s) 721
Aor13HI TCCGGA 1 cut(s) 504
AoxI GGCC 4 cut(s) 3, 94, 165, 174
ApeKI GCWGC 1 cut(s) 586
AsiGI ACCGGT 1 cut(s) 580
AspLEI GCGC 1 cut(s) 688
AspS9I GGNCC 3 cut(s) 73, 175, 538
AsuC2I CCSGG 1 cut(s) 708
AvaI CYCGRG 1 cut(s) 721
AvaII GGWCC 2 cut(s) 73, 538
AxyI CCTNAGG 1 cut(s) 690
BamHI GGATCC 1 cut(s) 157
BanI GGYRCC 1 cut(s) 685
BanII GRGCYC 1 cut(s) 316
Bbv12I GWGCWC 1 cut(s) 606
BbvI GCAGC 1 cut(s) 573
BccI CCATC 1 cut(s) 332
BceAI ACGGC 1 cut(s) 699
BciT130I CCWGG 5 cut(s) 71, 77, 193, 231, 356
BcnI CCSGG 1 cut(s) 708
BcoDI GTCTC 1 cut(s) 638
BfaI CTAG 1 cut(s) 399
BfmI CTRYAG 1 cut(s) 587
BfoI RGCGCY 1 cut(s) 689
BglI GCCNNNNNGGC 1 cut(s) 173
BisI GCNGC 2 cut(s) 94, 587
BlsI GCNGC 2 cut(s) 95, 588
Bme1390I CCNGG 6 cut(s) 71, 77, 193, 231, 356, 708
Bme18I GGWCC 2 cut(s) 73, 538
BmeT110I CYCGRG 1 cut(s) 721
BmgT120I GGNCC 3 cut(s) 73, 175, 538
BmiI GGNNCC 3 cut(s) 159, 579, 687
BmrFI CCNGG 6 cut(s) 71, 77, 193, 231, 356, 708
BmrI ACTGGG 1 cut(s) 311
BmsI GCATC 1 cut(s) 411
BmuI ACTGGG 1 cut(s) 311
BpmI CTGGAG 1 cut(s) 338
BpuMI CCSGG 1 cut(s) 708
BsaHI GRCGYC 1 cut(s) 686
BsaI GGTCTC 1 cut(s) 638
BsaJI CCNNGG 7 cut(s) 69, 76, 162, 230, 286, 707, 720
BsaWI WCCGGW 2 cut(s) 504, 580
BsaXI ACNNNNNCTCC 2 cut(s) 350, 380
Bsc4I CCNNNNNNNGG 5 cut(s) 55, 76, 277, 292, 385
Bse118I RCCGGY 2 cut(s) 535, 580
Bse1I ACTGG 3 cut(s) 27, 317, 364
Bse21I CCTNAGG 1 cut(s) 690
BseAI TCCGGA 1 cut(s) 504
BseBI CCWGG 5 cut(s) 71, 77, 193, 231, 356
BseDI CCNNGG 7 cut(s) 69, 76, 162, 230, 286, 707, 720
BseGI GGATG 4 cut(s) 241, 402, 501, 716
BseLI CCNNNNNNNGG 5 cut(s) 55, 76, 277, 292, 385
BseNI ACTGG 3 cut(s) 27, 317, 364
BseXI GCAGC 1 cut(s) 573
BseYI CCCAGC 1 cut(s) 647
Bsh1236I CGCG 1 cut(s) 381
Bsh1285I CGRYCG 2 cut(s) 271, 310
BshFI GGCC 4 cut(s) 5, 96, 167, 176
BshNI GGYRCC 1 cut(s) 685
BshTI ACCGGT 1 cut(s) 580
BsiEI CGRYCG 2 cut(s) 271, 310
BsiHKAI GWGCWC 1 cut(s) 606
BsiHKCI CYCGRG 1 cut(s) 721
BsiSI CCGG 5 cut(s) 425, 505, 536, 581, 707
BslFI GGGAC 1 cut(s) 236
BslI CCNNNNNNNGG 5 cut(s) 55, 76, 277, 292, 385
BsmAI GTCTC 1 cut(s) 638
BsmFI GGGAC 1 cut(s) 236
BsnI GGCC 4 cut(s) 5, 96, 167, 176
Bso31I GGTCTC 1 cut(s) 638
BsoBI CYCGRG 1 cut(s) 721
Bsp1286I GDGCHC 2 cut(s) 316, 606
Bsp13I TCCGGA 1 cut(s) 504
Bsp143I GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
BspACI CCGC 3 cut(s) 93, 271, 379
BspANI GGCC 4 cut(s) 5, 96, 167, 176
BspEI TCCGGA 1 cut(s) 504
BspFNI CGCG 1 cut(s) 381
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 3 cut(s) 159, 579, 687
BspMAI CTGCAG 1 cut(s) 591
BspPI GGATC 5 cut(s) 152, 165, 355, 515, 659
BspQI GCTCTTC 1 cut(s) 414
BspT107I GGYRCC 1 cut(s) 685
BspTNI GGTCTC 1 cut(s) 638
BsrFI RCCGGY 2 cut(s) 535, 580
BsrI ACTGG 3 cut(s) 27, 317, 364
BssAI RCCGGY 2 cut(s) 535, 580
BssECI CCNNGG 7 cut(s) 69, 76, 162, 230, 286, 707, 720
BssMI GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
BssNI GRCGYC 1 cut(s) 686
BssT1I CCWWGG 1 cut(s) 162
Bst2UI CCWGG 5 cut(s) 71, 77, 193, 231, 356
Bst4CI ACNGT 1 cut(s) 627
Bst6I CTCTTC 2 cut(s) 414, 641
BstACI GRCGYC 1 cut(s) 686
BstDEI CTNAG 2 cut(s) 454, 690
BstDSI CCRYGG 1 cut(s) 286
BstENI CCTNNNNNAGG 1 cut(s) 53
BstF5I GGATG 4 cut(s) 241, 402, 501, 716
BstFNI CGCG 1 cut(s) 381
BstH2I RGCGCY 1 cut(s) 689
BstHHI GCGC 1 cut(s) 688
BstKTI GATC 7 cut(s) 87, 110, 160, 310, 363, 510, 654
BstMAI GTCTC 1 cut(s) 638
BstMBI GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
BstMCI CGRYCG 2 cut(s) 271, 310
BstMWI GCNNNNNNNGC 5 cut(s) 44, 102, 133, 173, 683
BstNI CCWGG 5 cut(s) 71, 77, 193, 231, 356
BstNSI RCATGY 1 cut(s) 647
BstSCI CCNGG 6 cut(s) 69, 75, 191, 229, 354, 706
BstSFI CTRYAG 1 cut(s) 587
BstUI CGCG 1 cut(s) 381
BstV1I GCAGC 1 cut(s) 573
BstX2I RGATCY 4 cut(s) 157, 360, 507, 651
BstYI RGATCY 4 cut(s) 157, 360, 507, 651
Bsu36I CCTNAGG 1 cut(s) 690
BsuRI GGCC 4 cut(s) 5, 96, 167, 176
BtgI CCRYGG 1 cut(s) 286
BtsCI GGATG 4 cut(s) 241, 402, 501, 716
BtsIMutI CAGTG 1 cut(s) 632
CaiI CAGNNNCTG 2 cut(s) 76, 667
CciI TCATGA 1 cut(s) 520
CfoI GCGC 1 cut(s) 688
Cfr10I RCCGGY 2 cut(s) 535, 580
Cfr13I GGNCC 3 cut(s) 73, 175, 538
CseI GACGC 3 cut(s) 370, 539, 673
Csp6I GTAC 2 cut(s) 189, 281
CspAI ACCGGT 1 cut(s) 580
CviAII CATG 3 cut(s) 521, 644, 657
CviQI GTAC 2 cut(s) 189, 281
DdeI CTNAG 2 cut(s) 454, 690
DinI GGCGCC 1 cut(s) 687
DpnI GATC 7 cut(s) 86, 109, 159, 309, 362, 509, 653
DpnII GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
DraI TTTAAA 1 cut(s) 370
Eam1104I CTCTTC 2 cut(s) 414, 641
EarI CTCTTC 2 cut(s) 414, 641
Eco130I CCWWGG 1 cut(s) 162
Eco147I AGGCCT 1 cut(s) 167
Eco24I GRGCYC 1 cut(s) 316
Eco31I GGTCTC 1 cut(s) 638
Eco32I GATATC 1 cut(s) 568
Eco47I GGWCC 2 cut(s) 73, 538
Eco57I CTGAAG 1 cut(s) 622
Eco81I CCTNAGG 1 cut(s) 690
Eco88I CYCGRG 1 cut(s) 721
EcoNI CCTNNNNNAGG 1 cut(s) 53
EcoO109I RGGNCCY 1 cut(s) 73
EcoRII CCWGG 5 cut(s) 69, 75, 191, 229, 354
EcoRV GATATC 1 cut(s) 568
EcoT14I CCWWGG 1 cut(s) 162
EcoT38I GRGCYC 1 cut(s) 316
EgeI GGCGCC 1 cut(s) 687
EheI GGCGCC 1 cut(s) 687
ErhI CCWWGG 1 cut(s) 162
FaeI CATG 3 cut(s) 524, 647, 660
FaiI YATR 7 cut(s) 206, 336, 375, 417, 522, 645, 658
FaqI GGGAC 1 cut(s) 236
FatI CATG 3 cut(s) 520, 643, 656
Fnu4HI GCNGC 2 cut(s) 94, 587
FokI GGATG 4 cut(s) 248, 389, 488, 703
FriOI GRGCYC 1 cut(s) 316
Fsp4HI GCNGC 2 cut(s) 94, 587
FspBI CTAG 1 cut(s) 399
GlaI GCGC 1 cut(s) 687
GluI GCNGC 2 cut(s) 94, 587
GsaI CCCAGC 1 cut(s) 651
GsuI CTGGAG 1 cut(s) 338
HaeII RGCGCY 1 cut(s) 689
HaeIII GGCC 4 cut(s) 5, 96, 167, 176
HapII CCGG 5 cut(s) 425, 505, 536, 581, 707
HgaI GACGC 3 cut(s) 370, 539, 673
HhaI GCGC 1 cut(s) 688
Hin1I GRCGYC 1 cut(s) 686
Hin1II CATG 3 cut(s) 524, 647, 660
Hin6I GCGC 1 cut(s) 686
HinP1I GCGC 1 cut(s) 686
HinfI GANTC 2 cut(s) 257, 342
HpaII CCGG 5 cut(s) 425, 505, 536, 581, 707
Hpy166II GTNNAC 2 cut(s) 202, 623
Hpy188I TCNGA 3 cut(s) 572, 641, 663
Hpy188III TCNNGA 4 cut(s) 221, 505, 511, 521
Hpy8I GTNNAC 2 cut(s) 202, 623
Hpy99I CGWCG 1 cut(s) 555
HpyAV CCTTC 4 cut(s) 130, 178, 475, 487
HpyCH4III ACNGT 1 cut(s) 627
HpyCH4V TGCA 1 cut(s) 589
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 102, 133, 173, 683
HpyF3I CTNAG 2 cut(s) 454, 690
Hsp92I GRCGYC 1 cut(s) 686
Hsp92II CATG 3 cut(s) 524, 647, 660
HspAI GCGC 1 cut(s) 686
KasI GGCGCC 1 cut(s) 685
Kpn2I TCCGGA 1 cut(s) 504
Kzo9I GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
LguI GCTCTTC 1 cut(s) 414
LmnI GCTCC 1 cut(s) 547
Lsp1109I GCAGC 1 cut(s) 573
LweI GCATC 1 cut(s) 411
MaeI CTAG 1 cut(s) 399
MaeIII GTNAC 2 cut(s) 19, 302
MalI GATC 7 cut(s) 86, 109, 159, 309, 362, 509, 653
MboI GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
MboII GAAGA 5 cut(s) 94, 102, 341, 431, 628
MflI RGATCY 4 cut(s) 157, 360, 507, 651
MhlI GDGCHC 2 cut(s) 316, 606
Mly113I GGCGCC 1 cut(s) 686
MlyI GAGTC 1 cut(s) 351
MmeI TCCRAC 1 cut(s) 525
MnlI CCTC 9 cut(s) 16, 49, 49, 59, 360, 417, 449, 609, 730
MroI TCCGGA 1 cut(s) 504
MseI TTAA 5 cut(s) 140, 369, 489, 698, 730
MspI CCGG 5 cut(s) 425, 505, 536, 581, 707
MspR9I CCNGG 6 cut(s) 71, 77, 193, 231, 356, 708
MssI GTTTAAAC 1 cut(s) 370
MvaI CCWGG 5 cut(s) 71, 77, 193, 231, 356
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 5 cut(s) 44, 102, 133, 173, 683
NarI GGCGCC 1 cut(s) 686
NciI CCSGG 1 cut(s) 708
NdeII GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
NlaIII CATG 3 cut(s) 524, 647, 660
NlaIV GGNNCC 3 cut(s) 159, 579, 687
NspI RCATGY 1 cut(s) 647
PagI TCATGA 1 cut(s) 520
PceI AGGCCT 1 cut(s) 167
PciSI GCTCTTC 1 cut(s) 414
PfeI GAWTC 1 cut(s) 257
PflMI CCANNNNNTGG 1 cut(s) 76
PfoI TCCNGGA 1 cut(s) 354
PinAI ACCGGT 1 cut(s) 580
PkrI GCNGC 2 cut(s) 95, 588
Ple19I CGATCG 1 cut(s) 310
PleI GAGTC 1 cut(s) 350
PluTI GGCGCC 1 cut(s) 689
PmeI GTTTAAAC 1 cut(s) 370
PpsI GAGTC 1 cut(s) 350
PpuMI RGGWCCY 1 cut(s) 73
Psp5II RGGWCCY 1 cut(s) 73
Psp6I CCWGG 5 cut(s) 69, 75, 191, 229, 354
PspFI CCCAGC 1 cut(s) 647
PspGI CCWGG 5 cut(s) 69, 75, 191, 229, 354
PspN4I GGNNCC 3 cut(s) 159, 579, 687
PspPI GGNCC 3 cut(s) 73, 175, 538
PspPPI RGGWCCY 1 cut(s) 73
PstI CTGCAG 1 cut(s) 591
PstNI CAGNNNCTG 2 cut(s) 76, 667
PsuI RGATCY 4 cut(s) 157, 360, 507, 651
PvuI CGATCG 1 cut(s) 310
RsaI GTAC 2 cut(s) 190, 282
RsaNI GTAC 2 cut(s) 189, 281
SapI GCTCTTC 1 cut(s) 414
SaqAI TTAA 5 cut(s) 140, 369, 489, 698, 730
SatI GCNGC 2 cut(s) 94, 587
Sau3AI GATC 7 cut(s) 84, 107, 157, 307, 360, 507, 651
Sau96I GGNCC 3 cut(s) 73, 175, 538
SchI GAGTC 1 cut(s) 351
ScrFI CCNGG 6 cut(s) 71, 77, 193, 231, 356, 708
SduI GDGCHC 2 cut(s) 316, 606
SetI ASST 8 cut(s) 78, 153, 194, 232, 282, 609, 620, 696
SfaNI GCATC 1 cut(s) 411
SfcI CTRYAG 1 cut(s) 587
SfiI GGCCNNNNNGGCC 1 cut(s) 173
SfoI GGCGCC 1 cut(s) 687
SinI GGWCC 2 cut(s) 73, 538
SseBI AGGCCT 1 cut(s) 167
SsiI CCGC 3 cut(s) 93, 271, 379
SspDI GGCGCC 1 cut(s) 685
SspMI CTAG 1 cut(s) 399
StuI AGGCCT 1 cut(s) 167
StyD4I CCNGG 6 cut(s) 69, 75, 191, 229, 354, 706
StyI CCWWGG 1 cut(s) 162
TaaI ACNGT 1 cut(s) 627
TaqI TCGA 1 cut(s) 310
TauI GCSGC 1 cut(s) 96
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 5 cut(s) 140, 369, 489, 698, 730
Tru9I TTAA 5 cut(s) 140, 369, 489, 698, 730
TscAI CASTG 1 cut(s) 632
TseI GCWGC 1 cut(s) 586
TspDTI ATGAA 4 cut(s) 432, 509, 584, 705
TspGWI ACGGA 1 cut(s) 275
TspRI CASTG 1 cut(s) 632
Van91I CCANNNNNTGG 1 cut(s) 76
VpaK11BI GGWCC 2 cut(s) 73, 538
XagI CCTNNNNNAGG 1 cut(s) 53
XceI RCATGY 1 cut(s) 647
XspI CTAG 1 cut(s) 399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.