Rroxscaffold_2G00079390

glutathione synthetase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
2408939 .. 2411062
2124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00079390.1

Sequence Viewer

Length: 567 bp
ATGCTTTGCGGGATTGTGGAGTTTGGACGACTCGAAATTGTTAGAAAAGCAATGGAAAAGCTAGAGTTATTTGTCATGAAGCCCCAAAGAGAAGGCGGAGGGAACAATATCTATGGCAATGATGTGAGGGAAACCCTCCTTAAATTGCATAAGAAAGTGTCGAAGCCGACGCGCTTATATGTTAATGCGAGAGCTCTCTACGGCACCCTCGCCTCCTCTTCTCCTAGCTTTCTTCTCTACATCTCTCACCCTCAACCCTCACTCAGCCACATGGCCTCCATTGATGCTATCATCGCTAGTTGTGCCGACTCCCTTGTGCTTGCGAGGGAGGTAGTGCTCCCGATCCGGGGAGAATTGGTGGCGGCCACGTTCGTCGATCTTCCAAATCTTTTCGATTGGGAGGCCTCTTACCTGCCTACCGGTCAACCCTACGGCCTTCAAGGTTCATCTCCTTTGTACTTGGATGGATGTCATTCGGTGATATTGAAGAAGAAGTCGGGCAAGCTACTTGGGTGTAGGAACAAGAATCATCGCCCTAGCAAGAAGCCGAATGTCGCCGCTTTATGA

Protein Analysis

188

Amino Acids

20.65

Weight (kDa)

9.49

Isoelectric Point (pI)

34.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GSH_synth_ATP PF03917 12 - 52 2.6e-12 Eukaryotic glutathione synthase, ATP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 420
AccB1I GGYRCC 1 cut(s) 203
AccII CGCG 1 cut(s) 172
AciI CCGC 4 cut(s) 9, 96, 362, 558
AclWI GGATC 1 cut(s) 337
AcoI YGGCCR 1 cut(s) 363
AfaI GTAC 1 cut(s) 458
AfiI CCNNNNNNNGG 2 cut(s) 346, 347
AgeI ACCGGT 1 cut(s) 419
AgsI TTSAA 2 cut(s) 440, 487
AluBI AGCT 4 cut(s) 61, 194, 228, 505
AluI AGCT 4 cut(s) 61, 194, 228, 505
Alw21I GWGCWC 2 cut(s) 196, 339
AlwI GGATC 1 cut(s) 337
AoxI GGCC 4 cut(s) 273, 363, 402, 433
AsiGI ACCGGT 1 cut(s) 419
AspLEI GCGC 1 cut(s) 174
AsuC2I CCSGG 1 cut(s) 347
AsuHPI GGTGA 2 cut(s) 239, 490
BanI GGYRCC 1 cut(s) 203
BanII GRGCYC 1 cut(s) 196
Bbv12I GWGCWC 2 cut(s) 196, 339
BccI CCATC 1 cut(s) 458
BceAI ACGGC 2 cut(s) 217, 448
BcnI CCSGG 1 cut(s) 347
BfaI CTAG 4 cut(s) 62, 225, 297, 537
BfuAI ACCTGC 1 cut(s) 420
BisI GCNGC 2 cut(s) 363, 558
BlsI GCNGC 2 cut(s) 364, 559
Bme1390I CCNGG 1 cut(s) 347
BmiI GGNNCC 1 cut(s) 205
BmrFI CCNGG 1 cut(s) 347
BmsI GCATC 1 cut(s) 274
BpuMI CCSGG 1 cut(s) 347
BsaJI CCNNGG 1 cut(s) 346
BsaWI WCCGGW 1 cut(s) 419
BsaXI ACNNNNNCTCC 4 cut(s) 260, 290, 342, 372
Bsc4I CCNNNNNNNGG 2 cut(s) 346, 347
Bse118I RCCGGY 1 cut(s) 419
Bse3DI GCAATG 2 cut(s) 57, 124
BseDI CCNNGG 1 cut(s) 346
BseGI GGATG 2 cut(s) 469, 473
BseLI CCNNNNNNNGG 2 cut(s) 346, 347
BseMI GCAATG 2 cut(s) 57, 124
BseMII CTCAG 1 cut(s) 277
BseRI GAGGAG 1 cut(s) 205
Bsh1236I CGCG 1 cut(s) 172
BshFI GGCC 4 cut(s) 275, 365, 404, 435
BshNI GGYRCC 1 cut(s) 203
BshTI ACCGGT 1 cut(s) 419
BsiHKAI GWGCWC 2 cut(s) 196, 339
BsiSI CCGG 2 cut(s) 346, 420
BslI CCNNNNNNNGG 2 cut(s) 346, 347
BsnI GGCC 4 cut(s) 275, 365, 404, 435
Bsp1286I GDGCHC 2 cut(s) 196, 339
Bsp143I GATC 2 cut(s) 342, 376
BspACI CCGC 4 cut(s) 9, 96, 362, 558
BspANI GGCC 4 cut(s) 275, 365, 404, 435
BspCNI CTCAG 1 cut(s) 276
BspFNI CGCG 1 cut(s) 172
BspHI TCATGA 1 cut(s) 75
BspLI GGNNCC 1 cut(s) 205
BspMI ACCTGC 1 cut(s) 420
BspPI GGATC 1 cut(s) 337
BspT107I GGYRCC 1 cut(s) 203
BsrDI GCAATG 2 cut(s) 57, 124
BsrFI RCCGGY 1 cut(s) 419
BssAI RCCGGY 1 cut(s) 419
BssECI CCNNGG 1 cut(s) 346
BssMI GATC 2 cut(s) 342, 376
Bst6I CTCTTC 1 cut(s) 223
BstC8I GCNNGC 2 cut(s) 321, 503
BstDEI CTNAG 1 cut(s) 263
BstF5I GGATG 2 cut(s) 469, 473
BstFNI CGCG 1 cut(s) 172
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 2 cut(s) 345, 379
BstMBI GATC 2 cut(s) 342, 376
BstMWI GCNNNNNNNGC 2 cut(s) 293, 302
BstSCI CCNGG 1 cut(s) 345
BstUI CGCG 1 cut(s) 172
BsuRI GGCC 4 cut(s) 275, 365, 404, 435
BtgZI GCGATG 2 cut(s) 277, 515
BtsCI GGATG 2 cut(s) 469, 473
BveI ACCTGC 1 cut(s) 420
Cac8I GCNNGC 2 cut(s) 321, 503
CciI TCATGA 1 cut(s) 75
CfoI GCGC 1 cut(s) 174
Cfr10I RCCGGY 1 cut(s) 419
CseI GACGC 1 cut(s) 178
Csp6I GTAC 1 cut(s) 457
CspAI ACCGGT 1 cut(s) 419
CviAII CATG 2 cut(s) 76, 271
CviQI GTAC 1 cut(s) 457
DdeI CTNAG 1 cut(s) 263
DpnI GATC 2 cut(s) 344, 378
DpnII GATC 2 cut(s) 342, 376
EaeI YGGCCR 1 cut(s) 363
Eam1104I CTCTTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 223
EciI GGCGGA 1 cut(s) 111
Ecl136II GAGCTC 1 cut(s) 194
Eco147I AGGCCT 1 cut(s) 404
Eco24I GRGCYC 1 cut(s) 196
Eco53kI GAGCTC 1 cut(s) 194
EcoICRI GAGCTC 1 cut(s) 194
EcoT38I GRGCYC 1 cut(s) 196
FaeI CATG 2 cut(s) 79, 274
FaiI YATR 7 cut(s) 77, 114, 150, 178, 180, 272, 565
FatI CATG 2 cut(s) 75, 270
FauI CCCGC 1 cut(s) 2
Fnu4HI GCNGC 2 cut(s) 363, 558
FokI GGATG 2 cut(s) 476, 480
FriOI GRGCYC 1 cut(s) 196
Fsp4HI GCNGC 2 cut(s) 363, 558
FspBI CTAG 4 cut(s) 62, 225, 297, 537
GlaI GCGC 1 cut(s) 173
GluI GCNGC 2 cut(s) 363, 558
HaeIII GGCC 4 cut(s) 275, 365, 404, 435
HapII CCGG 2 cut(s) 346, 420
HgaI GACGC 1 cut(s) 178
HhaI GCGC 1 cut(s) 174
Hin1II CATG 2 cut(s) 79, 274
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 1 cut(s) 425
HindII GTYRAC 1 cut(s) 425
HinfI GANTC 3 cut(s) 30, 308, 526
HpaII CCGG 2 cut(s) 346, 420
HphI GGTGA 2 cut(s) 239, 490
Hpy166II GTNNAC 1 cut(s) 425
Hpy188III TCNNGA 2 cut(s) 76, 340
Hpy8I GTNNAC 1 cut(s) 425
Hpy99I CGWCG 2 cut(s) 172, 377
HpyAV CCTTC 2 cut(s) 86, 446
HpyCH4IV ACGT 1 cut(s) 368
HpyCH4V TGCA 1 cut(s) 148
HpyF10VI GCNNNNNNNGC 2 cut(s) 293, 302
HpyF3I CTNAG 1 cut(s) 263
HpySE526I ACGT 1 cut(s) 368
Hsp92II CATG 2 cut(s) 79, 274
HspAI GCGC 1 cut(s) 172
Kzo9I GATC 2 cut(s) 342, 376
LmnI GCTCC 1 cut(s) 342
LpnPI CCDG 3 cut(s) 359, 425, 433
LweI GCATC 1 cut(s) 274
MaeI CTAG 4 cut(s) 62, 225, 297, 537
MaeII ACGT 1 cut(s) 368
MalI GATC 2 cut(s) 344, 378
MboI GATC 2 cut(s) 342, 376
MboII GAAGA 5 cut(s) 210, 224, 371, 499, 502
MhlI GDGCHC 2 cut(s) 196, 339
MluCI AATT 3 cut(s) 36, 143, 353
MlyI GAGTC 2 cut(s) 24, 302
MseI TTAA 2 cut(s) 141, 183
MspI CCGG 2 cut(s) 346, 420
MspR9I CCNGG 1 cut(s) 347
MvnI CGCG 1 cut(s) 172
MwoI GCNNNNNNNGC 2 cut(s) 293, 302
NciI CCSGG 1 cut(s) 347
NdeII GATC 2 cut(s) 342, 376
NlaIII CATG 2 cut(s) 79, 274
NlaIV GGNNCC 1 cut(s) 205
PagI TCATGA 1 cut(s) 75
PceI AGGCCT 1 cut(s) 404
PfeI GAWTC 1 cut(s) 526
PinAI ACCGGT 1 cut(s) 419
PkrI GCNGC 2 cut(s) 364, 559
PleI GAGTC 2 cut(s) 24, 302
PpsI GAGTC 2 cut(s) 24, 302
Psp124BI GAGCTC 1 cut(s) 196
PspN4I GGNNCC 1 cut(s) 205
RsaI GTAC 1 cut(s) 458
RsaNI GTAC 1 cut(s) 457
SacI GAGCTC 1 cut(s) 196
SaqAI TTAA 2 cut(s) 141, 183
SatI GCNGC 2 cut(s) 363, 558
Sau3AI GATC 2 cut(s) 342, 376
SchI GAGTC 2 cut(s) 24, 302
ScrFI CCNGG 1 cut(s) 347
SduI GDGCHC 2 cut(s) 196, 339
SetI ASST 8 cut(s) 63, 196, 230, 333, 371, 414, 445, 507
SfaNI GCATC 1 cut(s) 274
Sse9I AATT 3 cut(s) 36, 143, 353
SseBI AGGCCT 1 cut(s) 404
SsiI CCGC 4 cut(s) 9, 96, 362, 558
SspMI CTAG 4 cut(s) 62, 225, 297, 537
SstI GAGCTC 1 cut(s) 196
StuI AGGCCT 1 cut(s) 404
StyD4I CCNGG 1 cut(s) 345
TaiI ACGT 1 cut(s) 371
TaqI TCGA 4 cut(s) 33, 161, 375, 393
TasI AATT 3 cut(s) 36, 143, 353
TatI WGTACW 1 cut(s) 456
TauI GCSGC 2 cut(s) 365, 560
TfiI GAWTC 1 cut(s) 526
Tru1I TTAA 2 cut(s) 141, 183
Tru9I TTAA 2 cut(s) 141, 183
TspDTI ATGAA 2 cut(s) 92, 435
XspI CTAG 4 cut(s) 62, 225, 297, 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.