Rmu_sc0015936.1_g000003

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015936.1
OG0000169
Physical Location & Seq
Forward (+)
9413 .. 11686
2274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015936.1_g000003.1.cds

Sequence Viewer

Length: 1527 bp
atggcttccgctgatgccgtcactgctagctttgctgcctccttggctcttgctgagggtggtaaagccttgaaccttggaaagatgggtggaggtcctatgcacaaatcctcccaatcttttctccttggaaatcctcttactctcaaaactgtggactctgctaccttcaaatctcacttcctcagaacatggatggtggaaagggactttagagtccagaaaagggaggataatattttcttaggaggattttggtattttgatcgtactctggtctgtctggagaagtatgatggagtcctacctattgctgaggtttcgatgaaacatgttcgtatttgggttagggtttcgggcattccgccgctgtatgaggaacctgataattttactctcattgggaaccttttgggaggttttctggattatgacaagaaagaattccgaaaaggaggtagatgcgctcaatgtggcttgattactcattttggggccaagtgtgaggaccctaatgcggcaatttctactcctagggtattgcattttagcgacccccttactgctggtggttctttctccttctcggcccaagctagtattgatctacctttatcttctcctgctttaataaagaaaaagaagcctgtcattcgaagaaagaaaggattggtttcagggttggatacttctgctggtacagtgcaaagcatggttgaggaggagatattgcagccaacgatgaatatggatgaggtggtggtctcgggatcggcctccatggagggtgttctgaaatccattcctcctactgaagatgtgcatgtggaacctaaggtttacaagaagagaagcaagaatggaggttgtacccccttcccgaagaagtttaaaactatcctggggggtaagcttcttacttttcaagcagatggtttgggtaatttggtggaagctgacaaagagagtgagcaaggcatcctgaagaagaaggttggtagtagggctggcattttgaaccgagacaaactaaccaaccgaatccgagccgaaccaaagaagttggtaaccgacactgtcggtaaccgaactcttggtacggtacaaccgtaccgactccacatacacggtacgctttctagctctcccatgactctgggttcgatttctgggttcaagctcggtgattcttcaaccttgaagcttggtgattcttcaagctcaatttctgggttttggatttggtggttcttcaagatcgatttatgggttttagattcggtgattcttcttgttagaaactcggttggaggcccaaccaaccgataccaaccgagcatctcggtataccgacttctctccggtaccgaaccgaacccagccctagttggcaggcctctggagagtaaaaataagaatcctcgtccgcaaaagatggtgagtaggactcctctgcgtcttacttaccctactattgaaactggtcaagagattagccctatagaaaagggcaaaggtaagctctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

508

Amino Acids

55.51

Weight (kDa)

9.64

Isoelectric Point (pI)

38.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 215
Acc65I GGTACC 1 cut(s) 1364
AccB1I GGYRCC 1 cut(s) 1364
AccI GTMKAC 1 cut(s) 1347
AciI CCGC 5 cut(s) 9, 365, 368, 518, 1427
AclWI GGATC 1 cut(s) 778
AcsI RAATTY 1 cut(s) 443
AcuI CTGAAG 2 cut(s) 834, 1004
AfaI GTAC 8 cut(s) 271, 700, 871, 1099, 1104, 1112, 1132, 1366
AfiI CCNNNNNNNGG 2 cut(s) 226, 517
AflIII ACRYGT 1 cut(s) 331
AjnI CCWGG 1 cut(s) 900
AluBI AGCT 9 cut(s) 30, 596, 913, 956, 1143, 1180, 1204, 1221, 1522
AluI AGCT 9 cut(s) 30, 596, 913, 956, 1143, 1180, 1204, 1221, 1522
Alw26I GTCTC 2 cut(s) 769, 1017
AlwI GGATC 1 cut(s) 778
Ama87I CYCGRG 1 cut(s) 766
AoxI GGCC 5 cut(s) 495, 588, 774, 1312, 1394
ApeKI GCWGC 2 cut(s) 35, 733
ApoI RAATTY 1 cut(s) 443
ArsI GACNNNNNNTTYG 2 cut(s) 1144, 1176
Asp700I GAANNNNTTC 1 cut(s) 443
Asp718I GGTACC 1 cut(s) 1364
AspA2I CCTAGG 1 cut(s) 533
AspLEI GCGC 1 cut(s) 467
AspS9I GGNCC 5 cut(s) 95, 495, 508, 589, 1313
AsuHPI GGTGA 4 cut(s) 1196, 1220, 1294, 1450
AsuII TTCGAA 1 cut(s) 655
AsuNHI GCTAGC 1 cut(s) 26
AvaI CYCGRG 1 cut(s) 766
AvaII GGWCC 2 cut(s) 95, 508
AvrII CCTAGG 1 cut(s) 533
AxyI CCTNAGG 1 cut(s) 834
BaeI ACNNNNGTAYC 4 cut(s) 1094, 1094, 1127, 1127
BanI GGYRCC 1 cut(s) 1364
BarI GAAGNNNNNNTAC 2 cut(s) 1338, 1370
BbvCI CCTCAGC 2 cut(s) 54, 315
BbvI GCAGC 2 cut(s) 22, 745
BccI CCATC 5 cut(s) 79, 190, 290, 926, 1429
BceAI ACGGC 1 cut(s) 2
BciT130I CCWGG 1 cut(s) 902
BciVI GTATCC 1 cut(s) 679
BcoDI GTCTC 2 cut(s) 769, 1017
BfaI CTAG 5 cut(s) 27, 534, 597, 1140, 1385
BfmI CTRYAG 1 cut(s) 1500
BfuI GTATCC 1 cut(s) 679
BglI GCCNNNNNGGC 1 cut(s) 44
BisI GCNGC 4 cut(s) 36, 368, 519, 734
BlnI CCTAGG 1 cut(s) 533
BlsI GCNGC 4 cut(s) 37, 369, 520, 735
Bme1390I CCNGG 1 cut(s) 902
Bme18I GGWCC 2 cut(s) 95, 508
BmeT110I CYCGRG 1 cut(s) 766
BmgT120I GGNCC 5 cut(s) 95, 495, 508, 589, 1313
BmiI GGNNCC 6 cut(s) 381, 407, 496, 510, 831, 1366
BmrFI CCNGG 1 cut(s) 902
BmsI GCATC 4 cut(s) 4, 452, 987, 1347
BmtI GCTAGC 1 cut(s) 30
BplI GAGNNNNNCTC 2 cut(s) 1432, 1464
BpmI CTGGAG 2 cut(s) 305, 1421
Bpu10I CCTNAGC 2 cut(s) 54, 315
Bpu14I TTCGAA 1 cut(s) 655
Bsa29I ATCGAT 1 cut(s) 1260
BsaI GGTCTC 1 cut(s) 769
BsaJI CCNNGG 6 cut(s) 42, 76, 127, 533, 780, 901
BsaWI WCCGGW 1 cut(s) 1361
BsaXI ACNNNNNCTCC 2 cut(s) 95, 125
Bsc4I CCNNNNNNNGG 2 cut(s) 226, 517
Bse1I ACTGG 1 cut(s) 1486
Bse21I CCTNAGG 1 cut(s) 834
BseBI CCWGG 1 cut(s) 902
BseCI ATCGAT 1 cut(s) 1260
BseDI CCNNGG 6 cut(s) 42, 76, 127, 533, 780, 901
BseGI GGATG 3 cut(s) 201, 757, 978
BseLI CCNNNNNNNGG 2 cut(s) 226, 517
BseMII CTCAG 3 cut(s) 45, 199, 306
BseNI ACTGG 1 cut(s) 1486
BseRI GAGGAG 3 cut(s) 734, 737, 1440
BseXI GCAGC 2 cut(s) 22, 745
BseYI CCCAGC 1 cut(s) 1378
BshFI GGCC 5 cut(s) 497, 590, 776, 1314, 1396
BshNI GGYRCC 1 cut(s) 1364
BshVI ATCGAT 1 cut(s) 1260
BsiHKCI CYCGRG 1 cut(s) 766
BsiSI CCGG 1 cut(s) 1362
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 2 cut(s) 226, 517
BsmAI GTCTC 2 cut(s) 769, 1017
BsmFI GGGAC 1 cut(s) 221
BsmI GAATGC 1 cut(s) 360
BsnI GGCC 5 cut(s) 497, 590, 776, 1314, 1396
Bso31I GGTCTC 1 cut(s) 769
BsoBI CYCGRG 1 cut(s) 766
Bsp119I TTCGAA 1 cut(s) 655
Bsp143I GATC 4 cut(s) 265, 604, 770, 1257
Bsp19I CCATGG 1 cut(s) 780
BspACI CCGC 5 cut(s) 9, 365, 368, 518, 1427
BspANI GGCC 5 cut(s) 497, 590, 776, 1314, 1396
BspCNI CTCAG 3 cut(s) 46, 198, 307
BspDI ATCGAT 1 cut(s) 1260
BspLI GGNNCC 6 cut(s) 381, 407, 496, 510, 831, 1366
BspOI GCTAGC 1 cut(s) 30
BspPI GGATC 1 cut(s) 778
BspT104I TTCGAA 1 cut(s) 655
BspT107I GGYRCC 1 cut(s) 1364
BspTNI GGTCTC 1 cut(s) 769
BsrI ACTGG 1 cut(s) 1486
BssECI CCNNGG 6 cut(s) 42, 76, 127, 533, 780, 901
BssMI GATC 4 cut(s) 265, 604, 770, 1257
BssNAI GTATAC 1 cut(s) 1348
BssT1I CCWWGG 5 cut(s) 42, 76, 127, 533, 780
Bst1107I GTATAC 1 cut(s) 1348
Bst2UI CCWGG 1 cut(s) 902
Bst4CI ACNGT 6 cut(s) 154, 703, 1078, 1102, 1110, 1130
Bst6I CTCTTC 1 cut(s) 842
BstBI TTCGAA 1 cut(s) 655
BstC8I GCNNGC 3 cut(s) 28, 1009, 1394
BstDEI CTNAG 5 cut(s) 54, 185, 244, 315, 834
BstDSI CCRYGG 1 cut(s) 780
BstEII GGTNACC 2 cut(s) 1066, 1082
BstF5I GGATG 3 cut(s) 201, 757, 978
BstHHI GCGC 1 cut(s) 467
BstKTI GATC 4 cut(s) 268, 607, 773, 1260
BstMAI GTCTC 2 cut(s) 769, 1017
BstMBI GATC 4 cut(s) 265, 604, 770, 1257
BstMWI GCNNNNNNNGC 3 cut(s) 23, 32, 44
BstNI CCWGG 1 cut(s) 902
BstNSI RCATGY 2 cut(s) 335, 827
BstPI GGTNACC 2 cut(s) 1066, 1082
BstSCI CCNGG 1 cut(s) 900
BstSFI CTRYAG 1 cut(s) 1500
BstV1I GCAGC 2 cut(s) 22, 745
BstXI CCANNNNNNTGG 1 cut(s) 1156
BstZ17I GTATAC 1 cut(s) 1348
Bsu15I ATCGAT 1 cut(s) 1260
Bsu36I CCTNAGG 1 cut(s) 834
BsuI GTATCC 1 cut(s) 679
BsuRI GGCC 5 cut(s) 497, 590, 776, 1314, 1396
BsuTUI ATCGAT 1 cut(s) 1260
BtgI CCRYGG 1 cut(s) 780
BtsCI GGATG 3 cut(s) 201, 757, 978
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 3 cut(s) 21, 708, 1074
Cac8I GCNNGC 3 cut(s) 28, 1009, 1394
CfoI GCGC 1 cut(s) 467
Cfr13I GGNCC 5 cut(s) 95, 495, 508, 589, 1313
ClaI ATCGAT 1 cut(s) 1260
CseI GACGC 1 cut(s) 1445
Csp6I GTAC 8 cut(s) 270, 699, 870, 1098, 1103, 1111, 1131, 1365
CviAII CATG 6 cut(s) 192, 332, 712, 781, 824, 1150
CviQI GTAC 8 cut(s) 270, 699, 870, 1098, 1103, 1111, 1131, 1365
DdeI CTNAG 5 cut(s) 54, 185, 244, 315, 834
DpnI GATC 4 cut(s) 267, 606, 772, 1259
DpnII GATC 4 cut(s) 265, 604, 770, 1257
DraI TTTAAA 1 cut(s) 892
DrdI GACNNNNNNGTC 1 cut(s) 215
DseDI GACNNNNNNGTC 1 cut(s) 215
Eam1104I CTCTTC 1 cut(s) 842
EarI CTCTTC 1 cut(s) 842
EciI GGCGGA 1 cut(s) 354
Eco130I CCWWGG 5 cut(s) 42, 76, 127, 533, 780
Eco147I AGGCCT 1 cut(s) 1396
Eco31I GGTCTC 1 cut(s) 769
Eco47I GGWCC 2 cut(s) 95, 508
Eco57I CTGAAG 2 cut(s) 834, 1004
Eco81I CCTNAGG 1 cut(s) 834
Eco88I CYCGRG 1 cut(s) 766
Eco91I GGTNACC 2 cut(s) 1066, 1082
EcoO109I RGGNCCY 2 cut(s) 95, 508
EcoO65I GGTNACC 2 cut(s) 1066, 1082
EcoRI GAATTC 1 cut(s) 443
EcoRII CCWGG 1 cut(s) 900
EcoT14I CCWWGG 5 cut(s) 42, 76, 127, 533, 780
ErhI CCWWGG 5 cut(s) 42, 76, 127, 533, 780
FaeI CATG 6 cut(s) 195, 335, 715, 784, 827, 1153
FaqI GGGAC 1 cut(s) 221
FatI CATG 6 cut(s) 191, 331, 711, 780, 823, 1149
FblI GTMKAC 1 cut(s) 1347
Fnu4HI GCNGC 4 cut(s) 36, 368, 519, 734
FokI GGATG 3 cut(s) 208, 764, 965
Fsp4HI GCNGC 4 cut(s) 36, 368, 519, 734
FspBI CTAG 5 cut(s) 27, 534, 597, 1140, 1385
GlaI GCGC 1 cut(s) 466
GluI GCNGC 4 cut(s) 36, 368, 519, 734
GsaI CCCAGC 1 cut(s) 1382
GsuI CTGGAG 2 cut(s) 305, 1421
HaeIII GGCC 5 cut(s) 497, 590, 776, 1314, 1396
HapII CCGG 1 cut(s) 1362
HgaI GACGC 1 cut(s) 1445
HhaI GCGC 1 cut(s) 467
Hin1II CATG 6 cut(s) 195, 335, 715, 784, 827, 1153
Hin6I GCGC 1 cut(s) 465
HinP1I GCGC 1 cut(s) 465
HindIII AAGCTT 2 cut(s) 911, 1202
HpaII CCGG 1 cut(s) 1362
HphI GGTGA 4 cut(s) 1196, 1220, 1294, 1450
Hpy166II GTNNAC 3 cut(s) 157, 841, 1348
Hpy188I TCNGA 4 cut(s) 188, 449, 795, 1046
Hpy188III TCNNGA 9 cut(s) 220, 284, 425, 768, 880, 982, 1255, 1400, 1487
Hpy8I GTNNAC 3 cut(s) 157, 841, 1348
HpyAV CCTTC 4 cut(s) 178, 592, 886, 985
HpyCH4III ACNGT 6 cut(s) 154, 703, 1078, 1102, 1110, 1130
HpyCH4V TGCA 5 cut(s) 103, 544, 706, 733, 823
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 32, 44
HpyF3I CTNAG 5 cut(s) 54, 185, 244, 315, 834
Hsp92II CATG 6 cut(s) 195, 335, 715, 784, 827, 1153
HspAI GCGC 1 cut(s) 465
KpnI GGTACC 1 cut(s) 1368
Kzo9I GATC 4 cut(s) 265, 604, 770, 1257
Lsp1109I GCAGC 2 cut(s) 22, 745
LweI GCATC 4 cut(s) 4, 452, 987, 1347
MaeI CTAG 5 cut(s) 27, 534, 597, 1140, 1385
MaeIII GTNAC 3 cut(s) 19, 1066, 1082
MalI GATC 4 cut(s) 267, 606, 772, 1259
MboI GATC 4 cut(s) 265, 604, 770, 1257
MluCI AATT 5 cut(s) 388, 443, 522, 943, 1224
MlyI GAGTC 6 cut(s) 152, 225, 309, 1110, 1147, 1441
MmeI TCCRAC 2 cut(s) 663, 1288
MroXI GAANNNNTTC 1 cut(s) 443
MseI TTAA 2 cut(s) 629, 891
MspA1I CMGCKG 2 cut(s) 11, 370
MspI CCGG 1 cut(s) 1362
MspR9I CCNGG 1 cut(s) 902
Mva1269I GAATGC 1 cut(s) 360
MvaI CCWGG 1 cut(s) 902
MwoI GCNNNNNNNGC 3 cut(s) 23, 32, 44
NcoI CCATGG 1 cut(s) 780
NdeII GATC 4 cut(s) 265, 604, 770, 1257
NheI GCTAGC 1 cut(s) 26
NlaIII CATG 6 cut(s) 195, 335, 715, 784, 827, 1153
NlaIV GGNNCC 6 cut(s) 381, 407, 496, 510, 831, 1366
NmeAIII GCCGAG 1 cut(s) 566
NmuCI GTSAC 1 cut(s) 19
NspI RCATGY 2 cut(s) 335, 827
NspV TTCGAA 1 cut(s) 655
PceI AGGCCT 1 cut(s) 1396
PciI ACATGT 1 cut(s) 331
PcsI WCGNNNNNNNCGW 1 cut(s) 1106
PctI GAATGC 1 cut(s) 360
PdmI GAANNNNTTC 1 cut(s) 443
PfeI GAWTC 6 cut(s) 1041, 1187, 1211, 1277, 1285, 1417
PflFI GACNNNGTC 1 cut(s) 1076
PkrI GCNGC 4 cut(s) 37, 369, 520, 735
PleI GAGTC 6 cut(s) 152, 224, 308, 1110, 1147, 1441
PpsI GAGTC 6 cut(s) 152, 224, 308, 1110, 1147, 1441
PpuMI RGGWCCY 2 cut(s) 95, 508
PscI ACATGT 1 cut(s) 331
Psp5II RGGWCCY 2 cut(s) 95, 508
Psp6I CCWGG 1 cut(s) 900
PspEI GGTNACC 2 cut(s) 1066, 1082
PspFI CCCAGC 1 cut(s) 1378
PspGI CCWGG 1 cut(s) 900
PspN4I GGNNCC 6 cut(s) 381, 407, 496, 510, 831, 1366
PspPI GGNCC 5 cut(s) 95, 495, 508, 589, 1313
PspPPI RGGWCCY 2 cut(s) 95, 508
PsrI GAACNNNNNNTAC 2 cut(s) 1081, 1113
PsyI GACNNNGTC 1 cut(s) 1076
RsaI GTAC 8 cut(s) 271, 700, 871, 1099, 1104, 1112, 1132, 1366
RsaNI GTAC 8 cut(s) 270, 699, 870, 1098, 1103, 1111, 1131, 1365
SaqAI TTAA 2 cut(s) 629, 891
SatI GCNGC 4 cut(s) 36, 368, 519, 734
Sau3AI GATC 4 cut(s) 265, 604, 770, 1257
Sau96I GGNCC 5 cut(s) 95, 495, 508, 589, 1313
SchI GAGTC 6 cut(s) 152, 225, 309, 1110, 1147, 1441
ScrFI CCNGG 1 cut(s) 902
SfaNI GCATC 4 cut(s) 4, 452, 987, 1347
SfcI CTRYAG 1 cut(s) 1500
SfuI TTCGAA 1 cut(s) 655
SinI GGWCC 2 cut(s) 95, 508
Sse9I AATT 5 cut(s) 388, 443, 522, 943, 1224
SseBI AGGCCT 1 cut(s) 1396
SsiI CCGC 5 cut(s) 9, 365, 368, 518, 1427
SspI AATATT 1 cut(s) 238
SspMI CTAG 5 cut(s) 27, 534, 597, 1140, 1385
StuI AGGCCT 1 cut(s) 1396
StyD4I CCNGG 1 cut(s) 900
StyI CCWWGG 5 cut(s) 42, 76, 127, 533, 780
TaaI ACNGT 6 cut(s) 154, 703, 1078, 1102, 1110, 1130
TaqI TCGA 4 cut(s) 323, 655, 1163, 1260
TasI AATT 5 cut(s) 388, 443, 522, 943, 1224
TauI GCSGC 2 cut(s) 370, 521
TfiI GAWTC 6 cut(s) 1041, 1187, 1211, 1277, 1285, 1417
Tru1I TTAA 2 cut(s) 629, 891
Tru9I TTAA 2 cut(s) 629, 891
TscAI CASTG 3 cut(s) 28, 708, 1081
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 2 cut(s) 35, 733
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 2 cut(s) 341, 758
TspRI CASTG 3 cut(s) 28, 708, 1081
Tth111I GACNNNGTC 1 cut(s) 1076
VpaK11BI GGWCC 2 cut(s) 95, 508
XapI RAATTY 1 cut(s) 443
XceI RCATGY 2 cut(s) 335, 827
XmaJI CCTAGG 1 cut(s) 533
XmiI GTMKAC 1 cut(s) 1347
XmnI GAANNNNTTC 1 cut(s) 443
XspI CTAG 5 cut(s) 27, 534, 597, 1140, 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.