Rmu_sc0017323.1_g000003

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017323.1
OG0000169
Physical Location & Seq
Reverse (-)
19295 .. 20622
1328 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017323.1_g000003.1.cds

Sequence Viewer

Length: 1095 bp
atggcctccattgacgctgtgacagccagctttgcagccgctcttgctcttgttgatgggggcaaagccccggacctgggaaagatgggaggaggccctattcgcaagtcgtctcaatcctttctgcttggtaagcctctgacctgtaaggaggtggatcccaagactttcaaggctcacttccaccgtacctggatggtggaaagggagtttagggttcaggaaaaacctggagataacttcctgttctcttttgaattggcatgtgatcgaaataagttccagcatattcgtttctgggttagggttttagggatccctcccttgtatgaaaaacctgagaattttaccctaatcgaaaatctcttgggtggatttttggactatgataagaaggaattcaagaagggtttaatcgggatcttggttaatcatgatatctctaaaccggtgttgcttgagcgcaaagtgttcctggatgtcgaggtagaacctgtgttgcagtttcagttcgagcatttaaaaggaaggtgctcgcaatgtggtctcattatgcatgttgggattccatgtgaggagccgaacacaaccatatcgacacctagggttctgagttttccgggaccattgacttcaggcggatccttctctttctctgctaagaataagcgtgagtttttcacggccccctccactgtccctaagaagaaaaagccaactatcagaggagtggaatgtcatacttgttttgtcttaccaactgatacaaccactgctcctggtactgactcaggaaatggagtgactagtggctcggtgatggagcatgaactggaccagaatgtgggatcgatgtctgagcatgcagttgctattggctctgccctagctgatgctagtgcattgggattgcttagcaatgatcatggtgctcctcttgtcacattgaagaagaagatgggcaggccacttggaagtaggaacaagaaccagtgttccattaagaagcatggtgttgcccctctgcgactcacctatcctacatctagcggatcaattcctagccctcgagacaagggcaaagggaagatttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 zf-CCHC_4

Protein Analysis

364

Amino Acids

39.65

Weight (kDa)

9.29

Isoelectric Point (pI)

30.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 844
AccBSI CCGCTC 1 cut(s) 41
AciI CCGC 3 cut(s) 39, 639, 1050
AclWI GGATC 9 cut(s) 152, 165, 310, 323, 428, 636, 649, 856, 1060
AcsI RAATTY 2 cut(s) 343, 398
AcuI CTGAAG 1 cut(s) 618
AfaI GTAC 2 cut(s) 190, 784
AfiI CCNNNNNNNGG 3 cut(s) 76, 77, 844
AgeI ACCGGT 1 cut(s) 448
AgsI TTSAA 4 cut(s) 172, 257, 403, 949
AhlI ACTAGT 1 cut(s) 806
AjnI CCWGG 5 cut(s) 75, 191, 229, 474, 778
AloI GAACNNNNNNTCC 2 cut(s) 980, 1012
AluBI AGCT 2 cut(s) 30, 890
AluI AGCT 2 cut(s) 30, 890
Alw21I GWGCWC 2 cut(s) 536, 934
Alw26I GTCTC 3 cut(s) 117, 551, 1065
AlwI GGATC 9 cut(s) 152, 165, 310, 323, 428, 636, 649, 856, 1060
Ama87I CYCGRG 1 cut(s) 1068
AoxI GGCC 4 cut(s) 3, 94, 684, 965
ApeKI GCWGC 1 cut(s) 35
ApoI RAATTY 2 cut(s) 343, 398
AsiGI ACCGGT 1 cut(s) 448
Asp700I GAANNNNTTC 1 cut(s) 398
AspA2I CCTAGG 1 cut(s) 602
AspLEI GCGC 1 cut(s) 465
AspS9I GGNCC 5 cut(s) 73, 95, 623, 685, 835
AsuC2I CCSGG 2 cut(s) 71, 621
AsuHPI GGTGA 2 cut(s) 829, 1024
AvaI CYCGRG 1 cut(s) 1068
AvaII GGWCC 3 cut(s) 73, 623, 835
AvrII CCTAGG 1 cut(s) 602
BamHI GGATCC 3 cut(s) 157, 315, 641
Bbv12I GWGCWC 2 cut(s) 536, 934
BbvI GCAGC 1 cut(s) 47
BccI CCATC 5 cut(s) 50, 79, 190, 814, 952
BceAI ACGGC 1 cut(s) 699
BciT130I CCWGG 5 cut(s) 77, 193, 231, 476, 780
BclI TGATCA 1 cut(s) 922
BcnI CCSGG 2 cut(s) 71, 621
BcoDI GTCTC 3 cut(s) 117, 551, 1065
BcuI ACTAGT 1 cut(s) 806
BfaI CTAG 6 cut(s) 603, 807, 887, 897, 1047, 1062
BisI GCNGC 2 cut(s) 36, 39
BlnI CCTAGG 1 cut(s) 602
BlpI GCTNAGC 1 cut(s) 914
BlsI GCNGC 2 cut(s) 37, 40
Bme1390I CCNGG 7 cut(s) 71, 77, 193, 231, 476, 621, 780
Bme18I GGWCC 3 cut(s) 73, 623, 835
BmeT110I CYCGRG 1 cut(s) 1068
BmgT120I GGNCC 5 cut(s) 73, 95, 623, 685, 835
BmiI GGNNCC 6 cut(s) 159, 317, 579, 624, 643, 687
BmrFI CCNGG 7 cut(s) 71, 77, 193, 231, 476, 621, 780
BmsI GCATC 1 cut(s) 883
BpmI CTGGAG 1 cut(s) 252
Bpu1102I GCTNAGC 1 cut(s) 914
BpuEI CTTGAG 1 cut(s) 479
BpuMI CCSGG 2 cut(s) 71, 621
Bsa29I ATCGAT 1 cut(s) 851
BsaI GGTCTC 1 cut(s) 551
BsaJI CCNNGG 3 cut(s) 69, 76, 602
BsaWI WCCGGW 1 cut(s) 448
BsaXI ACNNNNNCTCC 2 cut(s) 760, 790
Bsc4I CCNNNNNNNGG 3 cut(s) 76, 77, 844
Bse118I RCCGGY 1 cut(s) 448
Bse1I ACTGG 2 cut(s) 837, 991
Bse3DI GCAATG 2 cut(s) 545, 925
BseBI CCWGG 5 cut(s) 77, 193, 231, 476, 780
BseCI ATCGAT 1 cut(s) 851
BseDI CCNNGG 3 cut(s) 69, 76, 602
BseGI GGATG 2 cut(s) 201, 484
BseLI CCNNNNNNNGG 3 cut(s) 76, 77, 844
BseMI GCAATG 2 cut(s) 545, 925
BseMII CTCAG 4 cut(s) 330, 602, 804, 849
BseNI ACTGG 2 cut(s) 837, 991
BseRI GAGGAG 4 cut(s) 105, 590, 741, 924
BseXI GCAGC 1 cut(s) 47
BshFI GGCC 4 cut(s) 5, 96, 686, 967
BshTI ACCGGT 1 cut(s) 448
BshVI ATCGAT 1 cut(s) 851
BsiHKAI GWGCWC 2 cut(s) 536, 934
BsiHKCI CYCGRG 1 cut(s) 1068
BsiSI CCGG 3 cut(s) 71, 449, 620
BslFI GGGAC 2 cut(s) 636, 683
BslI CCNNNNNNNGG 3 cut(s) 76, 77, 844
BsmAI GTCTC 3 cut(s) 117, 551, 1065
BsmBI CGTCTC 1 cut(s) 117
BsmFI GGGAC 2 cut(s) 636, 683
BsnI GGCC 4 cut(s) 5, 96, 686, 967
Bso31I GGTCTC 1 cut(s) 551
BsoBI CYCGRG 1 cut(s) 1068
Bsp1286I GDGCHC 2 cut(s) 536, 934
Bsp143I GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
Bsp1720I GCTNAGC 1 cut(s) 914
BspACI CCGC 3 cut(s) 39, 639, 1050
BspANI GGCC 4 cut(s) 5, 96, 686, 967
BspCNI CTCAG 4 cut(s) 331, 603, 803, 850
BspDI ATCGAT 1 cut(s) 851
BspHI TCATGA 1 cut(s) 433
BspLI GGNNCC 6 cut(s) 159, 317, 579, 624, 643, 687
BspPI GGATC 9 cut(s) 152, 165, 310, 323, 428, 636, 649, 856, 1060
BspTNI GGTCTC 1 cut(s) 551
BsrBI CCGCTC 1 cut(s) 41
BsrDI GCAATG 2 cut(s) 545, 925
BsrFI RCCGGY 1 cut(s) 448
BsrI ACTGG 2 cut(s) 837, 991
BssAI RCCGGY 1 cut(s) 448
BssECI CCNNGG 3 cut(s) 69, 76, 602
BssMI GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
BssT1I CCWWGG 1 cut(s) 602
Bst2UI CCWGG 5 cut(s) 77, 193, 231, 476, 780
Bst4CI ACNGT 2 cut(s) 188, 697
BstC8I GCNNGC 4 cut(s) 28, 536, 864, 965
BstDEI CTNAG 7 cut(s) 339, 611, 660, 702, 790, 858, 914
BstF5I GGATG 2 cut(s) 201, 484
BstHHI GCGC 1 cut(s) 465
BstKTI GATC 8 cut(s) 160, 271, 318, 423, 644, 851, 925, 1055
BstMAI GTCTC 3 cut(s) 117, 551, 1065
BstMBI GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 102, 133
BstNI CCWGG 5 cut(s) 77, 193, 231, 476, 780
BstNSI RCATGY 3 cut(s) 267, 560, 866
BstSCI CCNGG 7 cut(s) 69, 75, 191, 229, 474, 619, 778
BstV1I GCAGC 1 cut(s) 47
BstX2I RGATCY 4 cut(s) 157, 315, 420, 641
BstYI RGATCY 4 cut(s) 157, 315, 420, 641
Bsu15I ATCGAT 1 cut(s) 851
BsuRI GGCC 4 cut(s) 5, 96, 686, 967
BsuTUI ATCGAT 1 cut(s) 851
BtsCI GGATG 2 cut(s) 201, 484
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 3 cut(s) 693, 771, 998
Cac8I GCNNGC 4 cut(s) 28, 536, 864, 965
CciI TCATGA 1 cut(s) 433
CfoI GCGC 1 cut(s) 465
Cfr10I RCCGGY 1 cut(s) 448
Cfr13I GGNCC 5 cut(s) 73, 95, 623, 685, 835
ClaI ATCGAT 1 cut(s) 851
CseI GACGC 1 cut(s) 23
Csp6I GTAC 2 cut(s) 189, 783
CspAI ACCGGT 1 cut(s) 448
CviAII CATG 8 cut(s) 264, 434, 557, 570, 827, 863, 926, 1010
CviQI GTAC 2 cut(s) 189, 783
DdeI CTNAG 7 cut(s) 339, 611, 660, 702, 790, 858, 914
DpnI GATC 8 cut(s) 159, 270, 317, 422, 643, 850, 924, 1054
DpnII GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
DraI TTTAAA 1 cut(s) 522
EciI GGCGGA 1 cut(s) 654
Eco130I CCWWGG 1 cut(s) 602
Eco31I GGTCTC 1 cut(s) 551
Eco32I GATATC 1 cut(s) 439
Eco47I GGWCC 3 cut(s) 73, 623, 835
Eco57I CTGAAG 1 cut(s) 618
Eco88I CYCGRG 1 cut(s) 1068
EcoO109I RGGNCCY 1 cut(s) 95
EcoRI GAATTC 1 cut(s) 398
EcoRII CCWGG 5 cut(s) 75, 191, 229, 474, 778
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 1 cut(s) 602
EcoT22I ATGCAT 1 cut(s) 558
ErhI CCWWGG 1 cut(s) 602
Esp3I CGTCTC 1 cut(s) 117
FaeI CATG 8 cut(s) 267, 437, 560, 573, 830, 866, 929, 1013
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FaqI GGGAC 2 cut(s) 636, 683
FatI CATG 8 cut(s) 263, 433, 556, 569, 826, 862, 925, 1009
FbaI TGATCA 1 cut(s) 922
Fnu4HI GCNGC 2 cut(s) 36, 39
FokI GGATG 2 cut(s) 208, 491
Fsp4HI GCNGC 2 cut(s) 36, 39
FspBI CTAG 6 cut(s) 603, 807, 887, 897, 1047, 1062
GlaI GCGC 1 cut(s) 464
GluI GCNGC 2 cut(s) 36, 39
GsuI CTGGAG 1 cut(s) 252
HaeIII GGCC 4 cut(s) 5, 96, 686, 967
HapII CCGG 3 cut(s) 71, 449, 620
HgaI GACGC 1 cut(s) 23
HhaI GCGC 1 cut(s) 465
Hin1II CATG 8 cut(s) 267, 437, 560, 573, 830, 866, 929, 1013
Hin6I GCGC 1 cut(s) 463
HinP1I GCGC 1 cut(s) 463
HinfI GANTC 3 cut(s) 565, 788, 1029
HpaII CCGG 3 cut(s) 71, 449, 620
HphI GGTGA 2 cut(s) 829, 1024
Hpy188I TCNGA 4 cut(s) 141, 612, 725, 859
Hpy188III TCNNGA 6 cut(s) 221, 403, 418, 434, 792, 1070
HpyAV CCTTC 4 cut(s) 388, 400, 522, 655
HpyCH4III ACNGT 2 cut(s) 188, 697
HpyCH4V TGCA 5 cut(s) 35, 502, 556, 866, 902
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 102, 133
HpyF3I CTNAG 7 cut(s) 339, 611, 660, 702, 790, 858, 914
Hsp92II CATG 8 cut(s) 267, 437, 560, 573, 830, 866, 929, 1013
HspAI GCGC 1 cut(s) 463
Ksp22I TGATCA 1 cut(s) 922
Kzo9I GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
LmnI GCTCC 4 cut(s) 577, 781, 823, 937
Lsp1109I GCAGC 1 cut(s) 47
LweI GCATC 1 cut(s) 883
MaeI CTAG 6 cut(s) 603, 807, 887, 897, 1047, 1062
MaeIII GTNAC 3 cut(s) 19, 802, 940
MalI GATC 8 cut(s) 159, 270, 317, 422, 643, 850, 924, 1054
MbiI CCGCTC 1 cut(s) 41
MboI GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
MboII GAAGA 4 cut(s) 718, 961, 964, 967
MflI RGATCY 4 cut(s) 157, 315, 420, 641
MhlI GDGCHC 2 cut(s) 536, 934
MluCI AATT 4 cut(s) 257, 343, 398, 1056
MlyI GAGTC 2 cut(s) 782, 1023
Mph1103I ATGCAT 1 cut(s) 558
MroXI GAANNNNTTC 1 cut(s) 398
MseI TTAA 4 cut(s) 413, 429, 521, 1002
MspI CCGG 3 cut(s) 71, 449, 620
MspR9I CCNGG 7 cut(s) 71, 77, 193, 231, 476, 621, 780
MvaI CCWGG 5 cut(s) 77, 193, 231, 476, 780
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 102, 133
NciI CCSGG 2 cut(s) 71, 621
NdeII GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
NlaIII CATG 8 cut(s) 267, 437, 560, 573, 830, 866, 929, 1013
NlaIV GGNNCC 6 cut(s) 159, 317, 579, 624, 643, 687
NmuCI GTSAC 3 cut(s) 19, 802, 940
NsiI ATGCAT 1 cut(s) 558
NspI RCATGY 3 cut(s) 267, 560, 866
PaeI GCATGC 1 cut(s) 866
PaeR7I CTCGAG 1 cut(s) 1068
PagI TCATGA 1 cut(s) 433
PdmI GAANNNNTTC 1 cut(s) 398
PfeI GAWTC 1 cut(s) 565
PflMI CCANNNNNTGG 1 cut(s) 844
PfoI TCCNGGA 2 cut(s) 474, 619
PinAI ACCGGT 1 cut(s) 448
PkrI GCNGC 2 cut(s) 37, 40
PleI GAGTC 2 cut(s) 782, 1023
PpsI GAGTC 2 cut(s) 782, 1023
Psp6I CCWGG 5 cut(s) 75, 191, 229, 474, 778
PspGI CCWGG 5 cut(s) 75, 191, 229, 474, 778
PspN4I GGNNCC 6 cut(s) 159, 317, 579, 624, 643, 687
PspPI GGNCC 5 cut(s) 73, 95, 623, 685, 835
PsuI RGATCY 4 cut(s) 157, 315, 420, 641
RsaI GTAC 2 cut(s) 190, 784
RsaNI GTAC 2 cut(s) 189, 783
SaqAI TTAA 4 cut(s) 413, 429, 521, 1002
SatI GCNGC 2 cut(s) 36, 39
Sau3AI GATC 8 cut(s) 157, 268, 315, 420, 641, 848, 922, 1052
Sau96I GGNCC 5 cut(s) 73, 95, 623, 685, 835
SchI GAGTC 2 cut(s) 782, 1023
ScrFI CCNGG 7 cut(s) 71, 77, 193, 231, 476, 621, 780
SduI GDGCHC 2 cut(s) 536, 934
SfaNI GCATC 1 cut(s) 883
Sfr274I CTCGAG 1 cut(s) 1068
SinI GGWCC 3 cut(s) 73, 623, 835
SlaI CTCGAG 1 cut(s) 1068
SmlI CTYRAG 2 cut(s) 458, 1068
SmoI CTYRAG 2 cut(s) 458, 1068
SpeI ACTAGT 1 cut(s) 806
SphI GCATGC 1 cut(s) 866
Sse9I AATT 4 cut(s) 257, 343, 398, 1056
SsiI CCGC 3 cut(s) 39, 639, 1050
SspMI CTAG 6 cut(s) 603, 807, 887, 897, 1047, 1062
StyD4I CCNGG 7 cut(s) 69, 75, 191, 229, 474, 619, 778
StyI CCWWGG 1 cut(s) 602
TaaI ACNGT 2 cut(s) 188, 697
TaqI TCGA 7 cut(s) 271, 357, 483, 513, 596, 851, 1069
TasI AATT 4 cut(s) 257, 343, 398, 1056
TauI GCSGC 1 cut(s) 41
TfiI GAWTC 1 cut(s) 565
Tru1I TTAA 4 cut(s) 413, 429, 521, 1002
Tru9I TTAA 4 cut(s) 413, 429, 521, 1002
TscAI CASTG 3 cut(s) 700, 778, 998
TseFI GTSAC 3 cut(s) 19, 802, 940
TseI GCWGC 1 cut(s) 35
Tsp45I GTSAC 3 cut(s) 19, 802, 940
TspDTI ATGAA 2 cut(s) 345, 843
TspRI CASTG 3 cut(s) 700, 778, 998
Van91I CCANNNNNTGG 1 cut(s) 844
VpaK11BI GGWCC 3 cut(s) 73, 623, 835
XapI RAATTY 2 cut(s) 343, 398
XceI RCATGY 3 cut(s) 267, 560, 866
XhoI CTCGAG 1 cut(s) 1068
XmaJI CCTAGG 1 cut(s) 602
XmnI GAANNNNTTC 1 cut(s) 398
XspI CTAG 6 cut(s) 603, 807, 887, 897, 1047, 1062
Zsp2I ATGCAT 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.