Rroxscaffold_4G00313700
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
37435566 .. 37439233
3668 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00313700.1

Sequence Viewer

Length: 2595 bp
ATGGAGAGTTTCACATACCTTCATGTCCTGACCCTTCTCCTGTTCATCAACTTGTTACAACCTACCACCGTTGTAAGTTCATTTGGCAATGAAACCGATCGCTTGGCTTTGCTAAAATTCAAAGACTGCATAGCTTCTGATCCACATGGGCTGTTGAACTCATGGAATGACTCCGTTCAATACTGCAAATGGCCTGGAATTACTTGTGGCAAACGACATCAAAGAGTAACCGCCTTGTACCTACCACACGCTGTTTTGCACGGAACCATATCACCATACATTGGCAACCTCTCCTTTCTCAGGGACTTCAGCCTTTACAACAACAGCTTCTCTGAACTGAGCTACTTAAATATTGGAGAAAACCGCTTTACCGGCAAAATTCCTTCAGAGATCGGGTCATTGAGGAAGCTTGTGCATCTCACTCTAGAGGAAAACAATCTGACAGGAGCCATCCCACCTTCCTTGGGGAATCTTTCATCACTAACTGGACTTTTTTTGGGATGGAACAATTTGGTGGGCACCATTCCAGAGGTGCTAGTTCGATTGAGAAGCTTATCACTTTTTGCAATTGGTCTCAATAATCTCTCTGGTTTGATCCCTCCCTCCCTTTTTAACATATCATCTATGAACGGCATCTCACTTACAGGTAATATGTTTAAGGGCAGTATTCCGCCTGGTATTGGCCTAAACATGCCTAATCTCCAGAGATTGTTCCTTTCCGGAAATGAATTCTCTGGAGAAATACCTGCTTCACTTTCCAATGCTTCTCAACTTCATTCGATTGATTTTGGGCACAATAATTTTGTTGGCCAACTTCCCACAAGTTTTGGAAATTTTCCTAATCTCCAGCTGCTCAACTTCGAGATCAATAATCTAGGAAGTAATTCATCAAATGATTTGGGATTTATATCATTGTTGACAAATTGCAGCAATCTGGAGATGTTTTCTATGAGTTATAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAACTTCTCAACTCAACTTACTGAACTCTACCTTGGGGGTAATCAAATAGCGGGAACGATTCCTAAAGCATTAGGAAATCTCAACAGTTTAATACACTTGAGCCTGGAACATAACTTGTTCACTGGTATCATTCCAGCTTCTTTTGGGAAGTTGCAAAAACTGCAAAGATTATTTTTAAATTCCAATAGATTGTCAGGACGGATCCCATCTTCCCTTGGAAACCTCACCCAATTGTTTCTACTCTACTTATTAAAAAATAAATTAGAAGGAAGCATTCCTCCAAATATTGGTAACTGCCAAAATCTGCAGGTGATGGATATATCACACAATAAGCTTAGTGGAGATATACCATCACAAGTCATAGGCTTGTCCTCCTTCTTTGTCAAGCTCAATTTATCGCAAAACTCGCTAACAGGTACTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTCGATATCTCTGATAATAATTTGACCGGAGGAATTCCAGAAATTATTGGAGGCTGTCCGAGCCTTGAATTTCTTTACCTCCAAGGGAACCACTTTCAAGGAATCATACCTTCTTCTTTGGCTGATTTGAGAGGTTTCATACCAAATGCTTCATCATGCTACGCCGGATTCTCTCCAAGCAATCAAATTGGATCAGGTGGTTTTGGCTCTGTATACAAAGGGATTTTTAATCAAGAAGAAAGTAATGTTGTTGCCATCAAGGTCCTCAACCTTCAACGGAAAGGTGCTTCCAAGAGTTTTGTGGTTGAATGCAATGCACCGAGAAATATCCAGCATAGGAACCTTGTGAAGATCTTGACATGTTGCTCCGGCATGGACTACAATGACCGAATATTGCTTGTTGATTTGGCTTCTGCATTGTATTATCTTCATGACCATTGTGAACCACATATCATTCACTGCGACGTGAAGCCGAGCAACGTTCTTCTTGATGATGACATGGTTGCTCATGTTGGTGATTTTGGGTTGGCAAGACTCATCTCAACGACCACAGACTCCTATCAAAATCAAAGTAGCACGGTTGGAATAAAGGGAACCATTGGCTATCTTGCTCCAGAGTATGCAAGTGGTGTTGAGCCATCAAGACAAGGGGATGTGTATAGTTACGGGGTGCTCATGTTGCAATTGTTCACGGGAAGAAGACCTATCGACAAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAAGATGGCCATACCAGGAAGAGTGATGCAGATTATAGATCCTACTCTTCTTGCCACTTTAGAAGAGACAACACCTGCAACATCACAAAATGTAGTGAACTACATCAACGGTTACAATAATGAAATCGAAGCAGTTGAAGAAGACATTGACAATGAGAATTTAAGCAAGATGAGCACTTATGTGTGGAAGTGCATACTTCCAACCCTTAAGATTGGACTTGCATGCTCGGAAGAATTACCAAGGAATAGAATGTCTATGGAAGAGGTCCACAGGAAGCTACACCATATAAAAGATGCTTACTCGATGTTGACATCTATCAAGAAAGGCCAAGAAGAAGCTGAACAATATATAGGTGCTGTTATTTTCTTCTTTATGATGGGAGCAACAAAATGA

Protein Analysis

864

Amino Acids

94.73

Weight (kDa)

6.27

Isoelectric Point (pI)

35.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 7.6e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 336 - 395 6.3e-11 Leucine rich repeat
LRR_8 PF13855 362 - 419 2.6e-06 Leucine rich repeat
LRR_8 PF13855 460 - 516 3.9e-08 Leucine rich repeat
Pkinase PF00069 544 - 608 8.1e-08 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 545 - 608 2.2e-08 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 617 - 725 1.1e-17 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 618 - 729 4.7e-21 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 957
AarI CACCTGC 2 cut(s) 1291, 2284
Acc36I ACCTGC 3 cut(s) 754, 1291, 2284
AccB1I GGYRCC 1 cut(s) 518
AccB7I CCANNNNNTGG 2 cut(s) 281, 1280
AccI GTMKAC 1 cut(s) 1665
AccIII TCCGGA 1 cut(s) 719
AciI CCGC 4 cut(s) 231, 364, 671, 1043
AclI AACGTT 1 cut(s) 1932
AclWI GGATC 6 cut(s) 134, 589, 1189, 1202, 1651, 2234
AcoI YGGCCR 2 cut(s) 808, 2208
AcsI RAATTY 8 cut(s) 116, 378, 728, 832, 1171, 1485, 1520, 2359
AcuI CTGAAG 3 cut(s) 292, 369, 1457
AfaI GTAC 2 cut(s) 239, 1411
AfiI CCNNNNNNNGG 5 cut(s) 281, 300, 464, 680, 1280
AflII CTTAAG 1 cut(s) 2408
AflIII ACRYGT 1 cut(s) 1811
AgsI TTSAA 9 cut(s) 121, 157, 179, 1520, 1550, 1727, 1760, 2185, 2339
AjiI CACGTC 1 cut(s) 1918
AjnI CCWGG 4 cut(s) 193, 673, 1095, 2215
AjuI GAANNNNNNNTTGG 2 cut(s) 1008, 1040
AleI CACNNNNGTG 1 cut(s) 2381
Alw21I GWGCWC 2 cut(s) 2127, 2378
Alw26I GTCTC 2 cut(s) 578, 2261
AlwI GGATC 6 cut(s) 134, 589, 1189, 1202, 1651, 2234
Aor13HI TCCGGA 1 cut(s) 719
AoxI GGCC 5 cut(s) 191, 682, 808, 2208, 2527
ApeKI GCWGC 2 cut(s) 850, 927
ApoI RAATTY 8 cut(s) 116, 378, 728, 832, 1171, 1485, 1520, 2359
Asp700I GAANNNNTTC 1 cut(s) 883
AspS9I GGNCC 2 cut(s) 1714, 2467
AsuHPI GGTGA 4 cut(s) 264, 1210, 1315, 1979
AvaII GGWCC 2 cut(s) 1714, 2467
BaeGI GKGCMC 2 cut(s) 521, 795
BalI TGGCCA 2 cut(s) 810, 2210
BamHI GGATCC 1 cut(s) 1194
BanI GGYRCC 1 cut(s) 518
BbsI GAAGAC 2 cut(s) 2158, 2349
Bbv12I GWGCWC 2 cut(s) 2127, 2378
BbvI GCAGC 2 cut(s) 837, 939
BccI CCATC 9 cut(s) 458, 495, 1207, 1300, 1351, 1715, 2098, 2200, 2572
BceAI ACGGC 1 cut(s) 646
BciT130I CCWGG 4 cut(s) 195, 675, 1097, 2217
BcoDI GTCTC 2 cut(s) 578, 2261
BfaI CTAG 3 cut(s) 425, 536, 875
BfmI CTRYAG 2 cut(s) 987, 1298
BfrI CTTAAG 1 cut(s) 2408
BfuAI ACCTGC 3 cut(s) 754, 1291, 2284
BglII AGATCT 1 cut(s) 1803
BisI GCNGC 2 cut(s) 851, 928
BlsI GCNGC 2 cut(s) 852, 929
Bme1390I CCNGG 4 cut(s) 195, 675, 1097, 2217
Bme18I GGWCC 2 cut(s) 1714, 2467
BmgBI CACGTC 1 cut(s) 1918
BmgT120I GGNCC 2 cut(s) 1714, 2467
BmiI GGNNCC 7 cut(s) 265, 448, 520, 1196, 1541, 1793, 2047
BmrFI CCNGG 4 cut(s) 195, 675, 1097, 2217
BmsI GCATC 4 cut(s) 424, 642, 2217, 2485
BpiI GAAGAC 2 cut(s) 2158, 2349
BpmI CTGGAG 5 cut(s) 686, 756, 830, 956, 2049
BpuEI CTTGAG 1 cut(s) 1111
BsaBI GATNNNNATC 1 cut(s) 907
BsaI GGTCTC 1 cut(s) 578
BsaJI CCNNGG 5 cut(s) 462, 1024, 1207, 1534, 2441
BsaWI WCCGGW 2 cut(s) 719, 1478
Bsc4I CCNNNNNNNGG 5 cut(s) 281, 300, 464, 680, 1280
Bse118I RCCGGY 1 cut(s) 371
Bse1I ACTGG 2 cut(s) 490, 1120
Bse3DI GCAATG 2 cut(s) 94, 1771
Bse8I GATNNNNATC 1 cut(s) 907
BseAI TCCGGA 1 cut(s) 719
BseBI CCWGG 4 cut(s) 195, 675, 1097, 2217
BseDI CCNNGG 5 cut(s) 462, 1024, 1207, 1534, 2441
BseGI GGATG 3 cut(s) 450, 506, 2110
BseJI GATNNNNATC 1 cut(s) 907
BseLI CCNNNNNNNGG 5 cut(s) 281, 300, 464, 680, 1280
BseMI GCAATG 2 cut(s) 94, 1771
BseMII CTCAG 2 cut(s) 313, 329
BseNI ACTGG 2 cut(s) 490, 1120
BseSI GKGCMC 2 cut(s) 521, 795
BseXI GCAGC 2 cut(s) 837, 939
Bsh1285I CGRYCG 1 cut(s) 100
BshFI GGCC 5 cut(s) 193, 684, 810, 2210, 2529
BshNI GGYRCC 1 cut(s) 518
BsiEI CGRYCG 1 cut(s) 100
BsiHKAI GWGCWC 2 cut(s) 2127, 2378
BsiSI CCGG 5 cut(s) 372, 720, 1479, 1617, 1821
BslFI GGGAC 1 cut(s) 317
BslI CCNNNNNNNGG 5 cut(s) 281, 300, 464, 680, 1280
BsmAI GTCTC 2 cut(s) 578, 2261
BsmFI GGGAC 1 cut(s) 317
BsmI GAATGC 2 cut(s) 1266, 1766
BsnI GGCC 5 cut(s) 193, 684, 810, 2210, 2529
Bso31I GGTCTC 1 cut(s) 578
Bsp1286I GDGCHC 4 cut(s) 521, 795, 2127, 2378
Bsp13I TCCGGA 1 cut(s) 719
Bsp143I GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
BspACI CCGC 4 cut(s) 231, 364, 671, 1043
BspANI GGCC 5 cut(s) 193, 684, 810, 2210, 2529
BspCNI CTCAG 2 cut(s) 312, 330
BspEI TCCGGA 1 cut(s) 719
BspHI TCATGA 1 cut(s) 1882
BspLI GGNNCC 7 cut(s) 265, 448, 520, 1196, 1541, 1793, 2047
BspMAI CTGCAG 1 cut(s) 1302
BspMI ACCTGC 3 cut(s) 754, 1291, 2284
BspPI GGATC 6 cut(s) 134, 589, 1189, 1202, 1651, 2234
BspT107I GGYRCC 1 cut(s) 518
BspTI CTTAAG 1 cut(s) 2408
BspTNI GGTCTC 1 cut(s) 578
BsrDI GCAATG 2 cut(s) 94, 1771
BsrFI RCCGGY 1 cut(s) 371
BsrI ACTGG 2 cut(s) 490, 1120
BssAI RCCGGY 1 cut(s) 371
BssECI CCNNGG 5 cut(s) 462, 1024, 1207, 1534, 2441
BssMI GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
BssNAI GTATAC 1 cut(s) 1666
BssT1I CCWWGG 5 cut(s) 462, 1024, 1207, 1534, 2441
Bst1107I GTATAC 1 cut(s) 1666
Bst2UI CCWGG 4 cut(s) 195, 675, 1097, 2217
Bst4CI ACNGT 4 cut(s) 70, 1079, 2032, 2312
Bst6I CTCTTC 4 cut(s) 2215, 2253, 2259, 2457
BstAFI CTTAAG 1 cut(s) 2408
BstAPI GCANNNNNTGC 1 cut(s) 1153
BstC8I GCNNGC 1 cut(s) 2425
BstDEI CTNAG 3 cut(s) 299, 338, 1328
BstENI CCTNNNNNAGG 1 cut(s) 298
BstF5I GGATG 3 cut(s) 450, 506, 2110
BstKTI GATC 9 cut(s) 100, 142, 393, 597, 867, 1197, 1646, 1806, 2242
BstMAI GTCTC 2 cut(s) 578, 2261
BstMBI GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
BstMCI CGRYCG 1 cut(s) 100
BstMWI GCNNNNNNNGC 6 cut(s) 372, 1153, 1399, 1512, 2131, 2373
BstNI CCWGG 4 cut(s) 195, 675, 1097, 2217
BstNSI RCATGY 3 cut(s) 694, 1815, 2427
BstSCI CCNGG 4 cut(s) 193, 673, 1095, 2215
BstSFI CTRYAG 2 cut(s) 987, 1298
BstSLI GKGCMC 2 cut(s) 521, 795
BstV1I GCAGC 2 cut(s) 837, 939
BstV2I GAAGAC 2 cut(s) 2158, 2349
BstX2I RGATCY 3 cut(s) 1194, 1803, 2239
BstYI RGATCY 3 cut(s) 1194, 1803, 2239
BstZ17I GTATAC 1 cut(s) 1666
BsuRI GGCC 5 cut(s) 193, 684, 810, 2210, 2529
BtrI CACGTC 1 cut(s) 1918
BtsCI GGATG 3 cut(s) 450, 506, 2110
BtsI GCAGTG 1 cut(s) 1909
BtsIMutI CAGTG 2 cut(s) 1113, 1909
BveI ACCTGC 3 cut(s) 754, 1291, 2284
Cac8I GCNNGC 1 cut(s) 2425
CciI TCATGA 1 cut(s) 1882
Cfr10I RCCGGY 1 cut(s) 371
Cfr13I GGNCC 2 cut(s) 1714, 2467
Csp6I GTAC 2 cut(s) 238, 1410
CspCI CAANNNNNGTGG 4 cut(s) 444, 479, 808, 843
CviQI GTAC 2 cut(s) 238, 1410
DdeI CTNAG 3 cut(s) 299, 338, 1328
DpnI GATC 9 cut(s) 99, 141, 392, 596, 866, 1196, 1645, 1805, 2241
DpnII GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
DraI TTTAAA 2 cut(s) 1170, 2173
EaeI YGGCCR 2 cut(s) 808, 2208
Eam1104I CTCTTC 4 cut(s) 2215, 2253, 2259, 2457
EarI CTCTTC 4 cut(s) 2215, 2253, 2259, 2457
EciI GGCGGA 1 cut(s) 660
Eco130I CCWWGG 5 cut(s) 462, 1024, 1207, 1534, 2441
Eco31I GGTCTC 1 cut(s) 578
Eco32I GATATC 1 cut(s) 1459
Eco47I GGWCC 2 cut(s) 1714, 2467
Eco57I CTGAAG 3 cut(s) 292, 369, 1457
EcoNI CCTNNNNNAGG 1 cut(s) 298
EcoO109I RGGNCCY 1 cut(s) 1714
EcoRI GAATTC 2 cut(s) 728, 1485
EcoRII CCWGG 4 cut(s) 193, 673, 1095, 2215
EcoRV GATATC 1 cut(s) 1459
EcoT14I CCWWGG 5 cut(s) 462, 1024, 1207, 1534, 2441
ErhI CCWWGG 5 cut(s) 462, 1024, 1207, 1534, 2441
FaqI GGGAC 1 cut(s) 317
FauI CCCGC 1 cut(s) 1036
FblI GTMKAC 1 cut(s) 1665
Fnu4HI GCNGC 2 cut(s) 851, 928
FokI GGATG 3 cut(s) 437, 513, 2117
Fsp4HI GCNGC 2 cut(s) 851, 928
FspBI CTAG 3 cut(s) 425, 536, 875
GluI GCNGC 2 cut(s) 851, 928
GsuI CTGGAG 5 cut(s) 686, 756, 830, 956, 2049
HaeIII GGCC 5 cut(s) 193, 684, 810, 2210, 2529
HapII CCGG 5 cut(s) 372, 720, 1479, 1617, 1821
HincII GTYRAC 2 cut(s) 918, 2511
HindII GTYRAC 2 cut(s) 918, 2511
HindIII AAGCTT 3 cut(s) 407, 550, 1325
HinfI GANTC 7 cut(s) 170, 469, 1051, 1554, 1620, 1986, 2006
HpaII CCGG 5 cut(s) 372, 720, 1479, 1617, 1821
HphI GGTGA 4 cut(s) 264, 1210, 1315, 1979
Hpy166II GTNNAC 8 cut(s) 918, 1113, 1666, 1895, 2142, 2299, 2470, 2511
Hpy188I TCNGA 7 cut(s) 139, 334, 388, 441, 1465, 1512, 2431
Hpy8I GTNNAC 8 cut(s) 918, 1113, 1666, 1895, 2142, 2299, 2470, 2511
Hpy99I CGWCG 1 cut(s) 1919
HpyAV CCTTC 8 cut(s) 29, 44, 393, 468, 1253, 1378, 1572, 1733
HpyCH4III ACNGT 4 cut(s) 70, 1079, 2032, 2312
HpyCH4IV ACGT 2 cut(s) 1917, 1932
HpyF10VI GCNNNNNNNGC 6 cut(s) 372, 1153, 1399, 1512, 2131, 2373
HpyF3I CTNAG 3 cut(s) 299, 338, 1328
HpySE526I ACGT 2 cut(s) 1917, 1932
Kpn2I TCCGGA 1 cut(s) 719
Kzo9I GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
LmnI GCTCC 4 cut(s) 446, 1823, 2068, 2582
Lsp1109I GCAGC 2 cut(s) 837, 939
LweI GCATC 4 cut(s) 424, 642, 2217, 2485
MaeI CTAG 3 cut(s) 425, 536, 875
MaeII ACGT 2 cut(s) 1917, 1932
MaeIII GTNAC 5 cut(s) 54, 226, 1283, 2114, 2312
MalI GATC 9 cut(s) 99, 141, 392, 596, 866, 1196, 1645, 1805, 2241
MboI GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
MfeI CAATTG 3 cut(s) 567, 1223, 2135
MflI RGATCY 3 cut(s) 1194, 1803, 2239
MhlI GDGCHC 4 cut(s) 521, 795, 2127, 2378
MlsI TGGCCA 2 cut(s) 810, 2210
MluNI TGGCCA 2 cut(s) 810, 2210
MlyI GAGTC 3 cut(s) 164, 1980, 2000
MmeI TCCRAC 2 cut(s) 2014, 2426
Mox20I TGGCCA 2 cut(s) 810, 2210
MroI TCCGGA 1 cut(s) 719
MroXI GAANNNNTTC 1 cut(s) 883
MscI TGGCCA 2 cut(s) 810, 2210
MslI CAYNNNNRTG 2 cut(s) 1965, 2381
Msp20I TGGCCA 2 cut(s) 810, 2210
MspA1I CMGCKG 1 cut(s) 850
MspCI CTTAAG 1 cut(s) 2408
MspI CCGG 5 cut(s) 372, 720, 1479, 1617, 1821
MspR9I CCNGG 4 cut(s) 195, 675, 1097, 2217
MunI CAATTG 3 cut(s) 567, 1223, 2135
Mva1269I GAATGC 2 cut(s) 1266, 1766
MvaI CCWGG 4 cut(s) 195, 675, 1097, 2217
MwoI GCNNNNNNNGC 6 cut(s) 372, 1153, 1399, 1512, 2131, 2373
NdeII GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
NlaIV GGNNCC 7 cut(s) 265, 448, 520, 1196, 1541, 1793, 2047
NmeAIII GCCGAG 1 cut(s) 1950
NspI RCATGY 3 cut(s) 694, 1815, 2427
OliI CACNNNNGTG 1 cut(s) 2381
PaeI GCATGC 1 cut(s) 2427
PagI TCATGA 1 cut(s) 1882
PaqCI CACCTGC 2 cut(s) 1291, 2284
PciI ACATGT 1 cut(s) 1811
PctI GAATGC 2 cut(s) 1266, 1766
PdmI GAANNNNTTC 1 cut(s) 883
PfeI GAWTC 4 cut(s) 469, 1051, 1554, 1620
PflMI CCANNNNNTGG 2 cut(s) 281, 1280
PkrI GCNGC 2 cut(s) 852, 929
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 3 cut(s) 164, 1980, 2000
PpsI GAGTC 3 cut(s) 164, 1980, 2000
PpuMI RGGWCCY 1 cut(s) 1714
PscI ACATGT 1 cut(s) 1811
PsiI TTATAA 1 cut(s) 957
Psp1406I AACGTT 1 cut(s) 1932
Psp5II RGGWCCY 1 cut(s) 1714
Psp6I CCWGG 4 cut(s) 193, 673, 1095, 2215
PspGI CCWGG 4 cut(s) 193, 673, 1095, 2215
PspN4I GGNNCC 7 cut(s) 265, 448, 520, 1196, 1541, 1793, 2047
PspPI GGNCC 2 cut(s) 1714, 2467
PspPPI RGGWCCY 1 cut(s) 1714
PstI CTGCAG 1 cut(s) 1302
PsuI RGATCY 3 cut(s) 1194, 1803, 2239
PvuI CGATCG 1 cut(s) 100
PvuII CAGCTG 1 cut(s) 850
RsaI GTAC 2 cut(s) 239, 1411
RsaNI GTAC 2 cut(s) 238, 1410
RseI CAYNNNNRTG 2 cut(s) 1965, 2381
SatI GCNGC 2 cut(s) 851, 928
Sau3AI GATC 9 cut(s) 97, 139, 390, 594, 864, 1194, 1643, 1803, 2239
Sau96I GGNCC 2 cut(s) 1714, 2467
SchI GAGTC 3 cut(s) 164, 1980, 2000
ScrFI CCNGG 4 cut(s) 195, 675, 1097, 2217
SduI GDGCHC 4 cut(s) 521, 795, 2127, 2378
SfaNI GCATC 4 cut(s) 424, 642, 2217, 2485
SfcI CTRYAG 2 cut(s) 987, 1298
SinI GGWCC 2 cut(s) 1714, 2467
SmiMI CAYNNNNRTG 2 cut(s) 1965, 2381
SmlI CTYRAG 2 cut(s) 1090, 2408
SmoI CTYRAG 2 cut(s) 1090, 2408
SphI GCATGC 1 cut(s) 2427
SsiI CCGC 4 cut(s) 231, 364, 671, 1043
SspI AATATT 3 cut(s) 352, 1279, 1845
SspMI CTAG 3 cut(s) 425, 536, 875
StyD4I CCNGG 4 cut(s) 193, 673, 1095, 2215
StyI CCWWGG 5 cut(s) 462, 1024, 1207, 1534, 2441
TaaI ACNGT 4 cut(s) 70, 1079, 2032, 2312
TaiI ACGT 2 cut(s) 1920, 1935
TaqI TCGA 7 cut(s) 541, 779, 861, 1455, 2160, 2328, 2504
TaqII GACCGA 1 cut(s) 1854
TfiI GAWTC 4 cut(s) 469, 1051, 1554, 1620
TscAI CASTG 2 cut(s) 1120, 1916
TseI GCWGC 2 cut(s) 850, 927
TspGWI ACGGA 4 cut(s) 163, 276, 1207, 1744
TspRI CASTG 2 cut(s) 1120, 1916
Van91I CCANNNNNTGG 2 cut(s) 281, 1280
Vha464I CTTAAG 1 cut(s) 2408
VpaK11BI GGWCC 2 cut(s) 1714, 2467
XagI CCTNNNNNAGG 1 cut(s) 298
XapI RAATTY 8 cut(s) 116, 378, 728, 832, 1171, 1485, 1520, 2359
XbaI TCTAGA 1 cut(s) 424
XceI RCATGY 3 cut(s) 694, 1815, 2427
XcmI CCANNNNNNNNNTGG 1 cut(s) 1750
XmiI GTMKAC 1 cut(s) 1665
XmnI GAANNNNTTC 1 cut(s) 883
XspI CTAG 3 cut(s) 425, 536, 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.