FvH4_7g24243
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
18746715 .. 18749971
3257 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g24243.t1

Sequence Viewer

Length: 3153 bp
ATGCTAATGGAGAGCTTCAGATTCCTTCATGTCCTGACCCTTCTCCTTTTCATCAACCTTCTCCAACCTATCACTGTTGTAAGTTCACTTGGCAATGAAACCGATCACTTGGCCTTGCTCAAATTCAAAGAATCCATAGTCGCCGATCCACACGGGTTCTTGAACTCATGGAATGACTCCGTTCACTTCTGCAAATGGGGAGGAATTACTTGCGGCAGACGGCATCAGAGAGTAACAGCCTTGAAACTACTACATCTTGAGTTGCATGGAACGATATCACCCTACATCGGCAACCTCTCCTTTCTCAGGACCTTCAGCCTTCTCAACAACAGCTTCTCTGGCAAGATTCCGCAACAAGTTGATCATCTGTTCCGACTGCGAGATCTCACTCTAAGTTACAATACGTTGGAGGGGGAAATTCCTGTCAACCTGACCTTCTGTCGGGAACTAAGGATCATAAACAGTGCATCAAACCGCCTTACGGGTAAAATTCCTTCAGAGATTGGCTCGTTGATGAAGCTTGTTTTTCTCAATCTTCAGATTAACAATCTGACAGGAGGCATCCCACCTTCATTGGGAAATCTTTCATCACTCACAACTCTTTCTTTGTCTGGTAATAACTTGGTGGGCAATGTTCCAGAGGAACTAGGCGTATTGAAAAGTTTGTCTTTCTTTGGAATTAGTCTCAATAATCTTCATGGTATGATCCCTCCCTCCCTTTTTAACATATCATCTATGAACGTCTTCGTACTTACATCGAATAAGTTTGAGGGCAGTATACCACCTAGTATAGGCCTAAACATGCCTAATCTCCAAAAACTGTATCTCAGTGATAATGAATTCTCTGGACAAATCCCAGCTTCAATTTCCAATGCTTCTCAGCTTCAGGAGCTTGATCTCGGGGAAAATAATTTTGTTGGCCAAGTTCCGGCAAGTTTGGGAGTTCTTCCTAATCTCCAGTTCCTTAGCTTAGAGTTCAATAAGTTAGGAAGTAATTCATCTAATGATTTGGAATTTATAACATCCTTGACCAATTGCAGCATTATGGAAGTGCTTGCTCTGACTAGTAACAATTTCGGTGGTGTTTTACCCAACTCCGTAGCCAATTTCTCAACCCAACTGACTGGACTCTACCTTGGGAGCAATCAAATAGCAGGAACAATTCCTGAAACATTAGGACATCTCAAAAATTTAATATTATTGGCCCTGGATCATAACTTGTTCACAGGTAACATTCCAGCTTCTTTGGGAAAGTTAAGCAAGCTGCAAATTTTATCTTTATCTACCAATAGATTATCAGGTTGGATCCCATCTTCCTTAGGAAATCTCACCCAATTGTTTCGACTCCAGTTATACGCAAATGAATTAGAAGGAATCATTCCTCCTGATATTGGTAATTGTCAAAGTCTGCAGTTAATAGATCTGTCACACAATAATCTTAGTGGAGATATACCATCCCAGGTCATTGGCATGTCCTCCTTATCTGACTTACTCAACTTATCGCAAAACTCGCTAACTGGCAGCCTGCCTGTGGAAGTGGGTAAGTTAAAGAATATCAGGACATTAGACATCTCTGGAAACAATCTGACAGGAGAAATTCCAGAAAGCATTGGAGGCTGTCAAAGCCTTGAATCTCTTTCACTACAAGGGAACCTCTTTCAAGGAATCATACCTTCTTCTTTGGATTCCTTGAGAGGTCTTCAGTATCTAGATCTTTCACAAAACCACTTGTCAGGACATATTCCAAAAGACCTACAACGACTTCCGTTCTTAATCTATTTAAACCTTTCGCTCAATAATCTGGAGGGTGAGGTCCCGAAAGAAGGAGTTTTTCGAAACATCAGTGCAATATCATTGGCTGGAAATACTAAACTTTGTGGTGGTGTTTCAGAATTGCAGCTACCAGCATGCACCATAAATGTCCCAAAGTTGAGACAATTTCGTGGTTTCAAACTAAAGCTCACAATTTCTTTAGTCGTTGGATGCTCTCTTCTGTTTGCATTCCTCTTAGTTTTTTATTGGAGGAGGAACACTCTAAAGAAGGAACTATTATCTGAAGCGGAATCAATCAACTTCCTCTCAAAGGTTTCATACCAGACACTTCATCAAGTTACTGGCGGATTCTCTCCGAGCAACCAAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTCTTGATCAAGAAGAAAACATCGTTGTTGCCATAAAGGTCCTCAACCTTCAACAGAAAGGAGCTTCGAAGAGTTTCATGGCTGAATGCAACGCGCTGAGGAATATCCGGCACAGGAATCTTGTGAAGATCATTACATGTTGCTCCAGCACTGATTACAGTGGTAATGACTTCAAAGCTCTAGTATTTGAGTATATGTCAAATGCAAGCTTAGAAGGCTGGTTGTACAGAGAAAACCAACCAAGGAGTGGTTTGAACCTTCTTCAAAGACTCAATATTGTTGTTGATGTGGCTTCTGCACTGTGGTATCTTCATGATCACTGTGAACCACAAATTATTCACCGGGACTTGAAGCCAAGCAATGTTCTTCTGGACGGTGACATGGTTGCTCGTGTTGGTGATTTTGGGTTAGCAAGACTCATCCCACCGTCTACAGACTCTTCTGAAAATCAAACTAGTACAGTTGGGATAAAGGGAACCATTGGCTATGCTGCTCCAGAGTATGCAGTTGGTGTTGAGCCGTCAACACAAGGGGATGTATACAGTTATGGGATACTTGTGCTGCAATTGTTCACGGGAAGAAGACCCACTGATGAAATGTTTGTAGACGGTTGCAATATCCATACTTTTGTTAAGACATGCATACAAGGAAGGCTTATGGAAAGTGTAGATCCTACTCTTATTGCCACTCTAGAAGAAGAGACTACAATTTCCACAACAAACAATGAAGTGACTAGAATCCATGCTTTCAGCTATGATATCGAAACTGGTGGAGACAACATTGACAATCAGAATTCAAGCAGGATGAACAATTACGCGGGGAAGTGCATACTTCCAATCCTTAAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGGATGTCTATGGAGGAAGTCCACAGAGACCTACACCGAATCAAAGATGCTTACAATGGTATCAGCATCCGTCGTGAGAGGCCAAGAAGAAGCTAA

Protein Analysis

1051

Amino Acids

115.2

Weight (kDa)

6.24

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 1.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 94 - 328 2.3e-15 Leucine-rich repeat region
LRR_8 PF13855 247 - 305 4.3e-06 Leucine rich repeat
LRR_8 PF13855 269 - 329 6.3e-08 Leucine rich repeat
LRR_14 PF23598 336 - 453 4.4e-07 Leucine-rich repeat region
LRR_8 PF13855 373 - 432 8.9e-07 Leucine rich repeat
LRR_8 PF13855 421 - 480 2.6e-06 Leucine rich repeat
LRR_14 PF23598 498 - 602 1.1e-08 Leucine-rich repeat region
LRR_8 PF13855 542 - 601 4.3e-09 Leucine rich repeat
Pkinase PF00069 711 - 924 1.5e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 712 - 925 3.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1019
AccB7I CCANNNNNTGG 1 cut(s) 2423
AccI GTMKAC 5 cut(s) 778, 2166, 2606, 2715, 2781
AccII CGCG 2 cut(s) 2270, 2993
AciI CCGC 7 cut(s) 213, 350, 475, 2060, 2118, 2151, 2993
AclWI GGATC 8 cut(s) 140, 461, 700, 1218, 1300, 1313, 2152, 2840
AcoI YGGCCR 1 cut(s) 919
AcsI RAATTY 9 cut(s) 122, 417, 489, 839, 1013, 1189, 1269, 1596, 2968
AcuI CTGAAG 6 cut(s) 298, 480, 521, 869, 1685, 2076
AfaI GTAC 3 cut(s) 750, 2402, 2635
AflII CTTAAG 1 cut(s) 3017
AflIII ACRYGT 1 cut(s) 2312
AhdI GACNNNNNGTC 1 cut(s) 438
AhlI ACTAGT 2 cut(s) 1064, 2630
AjnI CCWGG 2 cut(s) 1206, 1458
Alw26I GTCTC 5 cut(s) 689, 1927, 2870, 2943, 3078
AlwI GGATC 8 cut(s) 140, 461, 700, 1218, 1300, 1313, 2152, 2840
Ama87I CYCGRG 1 cut(s) 899
AoxI GGCC 5 cut(s) 111, 793, 919, 1203, 3137
ApeKI GCWGC 6 cut(s) 1038, 1264, 1521, 1897, 2666, 2737
ApoI RAATTY 9 cut(s) 122, 417, 489, 839, 1013, 1189, 1269, 1596, 2968
Asp700I GAANNNNTTC 4 cut(s) 583, 743, 994, 2249
AspLEI GCGC 1 cut(s) 2272
AspS9I GGNCC 4 cut(s) 309, 1204, 1813, 2215
AsuC2I CCSGG 1 cut(s) 2519
AsuHPI GGTGA 7 cut(s) 270, 1321, 1820, 2507, 2564, 2585, 3039
AsuII TTCGAA 2 cut(s) 1834, 2243
AvaI CYCGRG 1 cut(s) 899
AvaII GGWCC 3 cut(s) 309, 1813, 2215
AxyI CCTNAGG 1 cut(s) 1318
BaeI ACNNNNGTAYC 4 cut(s) 2465, 2498, 3100, 3133
BalI TGGCCA 1 cut(s) 921
BamHI GGATCC 1 cut(s) 1305
BarI GAAGNNNNNNTAC 2 cut(s) 478, 510
BauI CACGAG 1 cut(s) 2565
BbsI GAAGAC 3 cut(s) 736, 1691, 2764
BbvCI CCTCAGC 1 cut(s) 2273
BbvI GCAGC 6 cut(s) 1050, 1251, 1533, 1909, 2653, 2724
BccI CCATC 2 cut(s) 1318, 1462
BceAI ACGGC 2 cut(s) 236, 2680
BciT130I CCWGG 2 cut(s) 1208, 1460
BciVI GTATCC 1 cut(s) 2721
BclI TGATCA 3 cut(s) 361, 2182, 2491
BcnI CCSGG 1 cut(s) 2519
BcoDI GTCTC 5 cut(s) 689, 1927, 2870, 2943, 3078
BcuI ACTAGT 2 cut(s) 1064, 2630
BfaI CTAG 8 cut(s) 647, 786, 1065, 1709, 2357, 2631, 2867, 2910
BfmI CTRYAG 2 cut(s) 1409, 2607
BfrI CTTAAG 1 cut(s) 3017
BfuI GTATCC 1 cut(s) 2721
BglII AGATCT 3 cut(s) 382, 1420, 1711
BisI GCNGC 7 cut(s) 214, 1039, 1265, 1522, 1898, 2667, 2738
BlsI GCNGC 7 cut(s) 215, 1040, 1266, 1523, 1899, 2668, 2739
Bme1390I CCNGG 3 cut(s) 1208, 1460, 2519
Bme18I GGWCC 3 cut(s) 309, 1813, 2215
BmeRI GACNNNNNGTC 1 cut(s) 438
BmeT110I CYCGRG 1 cut(s) 899
BmgT120I GGNCC 4 cut(s) 309, 1204, 1813, 2215
BmiI GGNNCC 4 cut(s) 1307, 1652, 1815, 2653
BmrFI CCNGG 3 cut(s) 1208, 1460, 2519
BmsI GCATC 6 cut(s) 232, 476, 570, 1973, 3094, 3132
BpiI GAAGAC 3 cut(s) 736, 1691, 2764
BplI GAGNNNNNCTC 4 cut(s) 491, 523, 2017, 2049
BpmI CTGGAG 5 cut(s) 941, 1331, 1823, 2305, 2655
Bpu10I CCTNAGC 2 cut(s) 965, 2273
Bpu14I TTCGAA 2 cut(s) 1834, 2243
BpuEI CTTGAG 2 cut(s) 278, 1711
BpuMI CCSGG 1 cut(s) 2519
BsaI GGTCTC 1 cut(s) 3078
BsaJI CCNNGG 5 cut(s) 1135, 1206, 1458, 2417, 3050
Bse1I ACTGG 6 cut(s) 958, 1129, 1348, 1522, 2119, 2947
Bse21I CCTNAGG 1 cut(s) 1318
Bse3DI GCAATG 3 cut(s) 100, 637, 2542
BseBI CCWGG 2 cut(s) 1208, 1460
BseDI CCNNGG 5 cut(s) 1135, 1206, 1458, 2417, 3050
BseGI GGATG 9 cut(s) 561, 1022, 1454, 1988, 2595, 2716, 2985, 3066, 3123
BseMI GCAATG 3 cut(s) 100, 637, 2542
BseMII CTCAG 4 cut(s) 319, 841, 893, 2264
BseNI ACTGG 6 cut(s) 958, 1129, 1348, 1522, 2119, 2947
BseRI GAGGAG 1 cut(s) 2038
BseXI GCAGC 6 cut(s) 1050, 1251, 1533, 1909, 2653, 2724
BseYI CCCAGC 1 cut(s) 856
BsgI GTGCAG 1 cut(s) 2457
Bsh1236I CGCG 2 cut(s) 2270, 2993
BshFI GGCC 5 cut(s) 113, 795, 921, 1205, 3139
BsiHKCI CYCGRG 1 cut(s) 899
BsiSI CCGG 3 cut(s) 929, 2284, 2518
BslFI GGGAC 3 cut(s) 1799, 1907, 2534
BsmAI GTCTC 5 cut(s) 689, 1927, 2870, 2943, 3078
BsmFI GGGAC 3 cut(s) 1799, 1907, 2534
BsmI GAATGC 2 cut(s) 2000, 2267
BsnI GGCC 5 cut(s) 113, 795, 921, 1205, 3139
Bso31I GGTCTC 1 cut(s) 3078
BsoBI CYCGRG 1 cut(s) 899
Bsp119I TTCGAA 2 cut(s) 1834, 2243
Bsp1407I TGTACA 1 cut(s) 2400
BspACI CCGC 7 cut(s) 213, 350, 475, 2060, 2118, 2151, 2993
BspANI GGCC 5 cut(s) 113, 795, 921, 1205, 3139
BspCNI CTCAG 4 cut(s) 318, 840, 892, 2265
BspFNI CGCG 2 cut(s) 2270, 2993
BspHI TCATGA 1 cut(s) 2488
BspLI GGNNCC 4 cut(s) 1307, 1652, 1815, 2653
BspMAI CTGCAG 1 cut(s) 1413
BspPI GGATC 8 cut(s) 140, 461, 700, 1218, 1300, 1313, 2152, 2840
BspT104I TTCGAA 2 cut(s) 1834, 2243
BspTI CTTAAG 1 cut(s) 3017
BspTNI GGTCTC 1 cut(s) 3078
BsrDI GCAATG 3 cut(s) 100, 637, 2542
BsrGI TGTACA 1 cut(s) 2400
BsrI ACTGG 6 cut(s) 958, 1129, 1348, 1522, 2119, 2947
BssECI CCNNGG 5 cut(s) 1135, 1206, 1458, 2417, 3050
BssNAI GTATAC 3 cut(s) 779, 2167, 2716
BssSI CACGAG 1 cut(s) 2565
BssT1I CCWWGG 3 cut(s) 1135, 2417, 3050
Bst1107I GTATAC 3 cut(s) 779, 2167, 2716
Bst2BI CACGAG 1 cut(s) 2565
Bst2UI CCWGG 2 cut(s) 1208, 1460
Bst6I CTCTTC 4 cut(s) 1995, 2240, 2620, 2868
BstAFI CTTAAG 1 cut(s) 3017
BstAUI TGTACA 1 cut(s) 2400
BstBI TTCGAA 2 cut(s) 1834, 2243
BstC8I GCNNGC 6 cut(s) 1056, 1262, 1526, 1909, 2383, 3034
BstENI CCTNNNNNAGG 3 cut(s) 304, 789, 2081
BstF5I GGATG 9 cut(s) 561, 1022, 1454, 1988, 2595, 2716, 2985, 3066, 3123
BstFNI CGCG 2 cut(s) 2270, 2993
BstHHI GCGC 1 cut(s) 2272
BstMAI GTCTC 5 cut(s) 689, 1927, 2870, 2943, 3078
BstMWI GCNNNNNNNGC 7 cut(s) 339, 889, 1510, 1614, 1623, 2157, 2391
BstNI CCWGG 2 cut(s) 1208, 1460
BstNSI RCATGY 6 cut(s) 805, 1474, 1911, 2316, 2817, 3036
BstSCI CCNGG 3 cut(s) 1206, 1458, 2517
BstSFI CTRYAG 2 cut(s) 1409, 2607
BstUI CGCG 2 cut(s) 2270, 2993
BstV1I GCAGC 6 cut(s) 1050, 1251, 1533, 1909, 2653, 2724
BstV2I GAAGAC 3 cut(s) 736, 1691, 2764
BstX2I RGATCY 5 cut(s) 382, 1305, 1420, 1711, 2845
BstXI CCANNNNNNTGG 2 cut(s) 1124, 1466
BstYI RGATCY 5 cut(s) 382, 1305, 1420, 1711, 2845
BstZ17I GTATAC 3 cut(s) 779, 2167, 2716
Bsu36I CCTNAGG 1 cut(s) 1318
BsuI GTATCC 1 cut(s) 2721
BsuRI GGCC 5 cut(s) 113, 795, 921, 1205, 3139
BtsCI GGATG 9 cut(s) 561, 1022, 1454, 1988, 2595, 2716, 2985, 3066, 3123
BtsIMutI CAGTG 9 cut(s) 72, 469, 835, 1849, 2325, 2341, 2474, 2494, 2763
Cac8I GCNNGC 6 cut(s) 1056, 1262, 1526, 1909, 2383, 3034
CciI TCATGA 1 cut(s) 2488
CfoI GCGC 1 cut(s) 2272
Cfr13I GGNCC 4 cut(s) 309, 1204, 1813, 2215
Csp6I GTAC 3 cut(s) 749, 2401, 2634
CspCI CAANNNNNGTGG 4 cut(s) 555, 590, 1060, 1095
CviQI GTAC 3 cut(s) 749, 2401, 2634
DraI TTTAAA 1 cut(s) 1782
DriI GACNNNNNGTC 1 cut(s) 438
EaeI YGGCCR 1 cut(s) 919
Eam1104I CTCTTC 4 cut(s) 1995, 2240, 2620, 2868
Eam1105I GACNNNNNGTC 1 cut(s) 438
EarI CTCTTC 4 cut(s) 1995, 2240, 2620, 2868
EciI GGCGGA 1 cut(s) 2133
Eco130I CCWWGG 3 cut(s) 1135, 2417, 3050
Eco147I AGGCCT 1 cut(s) 795
Eco31I GGTCTC 1 cut(s) 3078
Eco32I GATATC 2 cut(s) 276, 2935
Eco47I GGWCC 3 cut(s) 309, 1813, 2215
Eco57I CTGAAG 6 cut(s) 298, 480, 521, 869, 1685, 2076
Eco81I CCTNAGG 1 cut(s) 1318
Eco88I CYCGRG 1 cut(s) 899
EcoNI CCTNNNNNAGG 3 cut(s) 304, 789, 2081
EcoO109I RGGNCCY 3 cut(s) 309, 1813, 2215
EcoRI GAATTC 2 cut(s) 839, 2968
EcoRII CCWGG 2 cut(s) 1206, 1458
EcoRV GATATC 2 cut(s) 276, 2935
EcoT14I CCWWGG 3 cut(s) 1135, 2417, 3050
EcoT22I ATGCAT 1 cut(s) 2819
ErhI CCWWGG 3 cut(s) 1135, 2417, 3050
FalI AAGNNNNNCTT 6 cut(s) 652, 684, 2163, 2195, 2814, 2846
FaqI GGGAC 3 cut(s) 1799, 1907, 2534
FauI CCCGC 1 cut(s) 2986
FbaI TGATCA 3 cut(s) 361, 2182, 2491
FblI GTMKAC 5 cut(s) 778, 2166, 2606, 2715, 2781
Fnu4HI GCNGC 7 cut(s) 214, 1039, 1265, 1522, 1898, 2667, 2738
FokI GGATG 9 cut(s) 548, 1009, 1441, 1995, 2582, 2723, 2992, 3073, 3110
Fsp4HI GCNGC 7 cut(s) 214, 1039, 1265, 1522, 1898, 2667, 2738
FspBI CTAG 8 cut(s) 647, 786, 1065, 1709, 2357, 2631, 2867, 2910
GlaI GCGC 1 cut(s) 2271
GluI GCNGC 7 cut(s) 214, 1039, 1265, 1522, 1898, 2667, 2738
GsaI CCCAGC 1 cut(s) 860
GsuI CTGGAG 5 cut(s) 941, 1331, 1823, 2305, 2655
HaeIII GGCC 5 cut(s) 113, 795, 921, 1205, 3139
HapII CCGG 3 cut(s) 929, 2284, 2518
HhaI GCGC 1 cut(s) 2272
Hin6I GCGC 1 cut(s) 2270
HinP1I GCGC 1 cut(s) 2270
HincII GTYRAC 2 cut(s) 427, 2700
HindII GTYRAC 2 cut(s) 427, 2700
HindIII AAGCTT 2 cut(s) 518, 2383
HpaII CCGG 3 cut(s) 929, 2284, 2518
HphI GGTGA 7 cut(s) 270, 1321, 1820, 2507, 2564, 2585, 3039
Hpy99I CGWCG 1 cut(s) 3132
HpyCH4IV ACGT 2 cut(s) 404, 741
HpyF10VI GCNNNNNNNGC 7 cut(s) 339, 889, 1510, 1614, 1623, 2157, 2391
HpySE526I ACGT 2 cut(s) 404, 741
HspAI GCGC 1 cut(s) 2270
Ksp22I TGATCA 3 cut(s) 361, 2182, 2491
LmnI GCTCC 5 cut(s) 889, 1140, 2237, 2324, 2674
Lsp1109I GCAGC 6 cut(s) 1050, 1251, 1533, 1909, 2653, 2724
LweI GCATC 6 cut(s) 232, 476, 570, 1973, 3094, 3132
MaeI CTAG 8 cut(s) 647, 786, 1065, 1709, 2357, 2631, 2867, 2910
MaeII ACGT 2 cut(s) 404, 741
MaeIII GTNAC 8 cut(s) 232, 395, 1067, 1229, 1425, 2110, 2552, 2905
MfeI CAATTG 3 cut(s) 1033, 1334, 2741
MflI RGATCY 5 cut(s) 382, 1305, 1420, 1711, 2845
MlsI TGGCCA 1 cut(s) 921
MluNI TGGCCA 1 cut(s) 921
MlyI GAGTC 6 cut(s) 170, 1122, 1338, 2439, 2586, 2606
MmeI TCCRAC 5 cut(s) 88, 387, 397, 1283, 1960
Mox20I TGGCCA 1 cut(s) 921
Mph1103I ATGCAT 1 cut(s) 2819
MroXI GAANNNNTTC 4 cut(s) 583, 743, 994, 2249
MscI TGGCCA 1 cut(s) 921
MslI CAYNNNNRTG 1 cut(s) 1469
Msp20I TGGCCA 1 cut(s) 921
MspCI CTTAAG 1 cut(s) 3017
MspI CCGG 3 cut(s) 929, 2284, 2518
MspR9I CCNGG 3 cut(s) 1208, 1460, 2519
MunI CAATTG 3 cut(s) 1033, 1334, 2741
Mva1269I GAATGC 2 cut(s) 2000, 2267
MvaI CCWGG 2 cut(s) 1208, 1460
MvnI CGCG 2 cut(s) 2270, 2993
MwoI GCNNNNNNNGC 7 cut(s) 339, 889, 1510, 1614, 1623, 2157, 2391
NciI CCSGG 1 cut(s) 2519
NlaIV GGNNCC 4 cut(s) 1307, 1652, 1815, 2653
NmuCI GTSAC 3 cut(s) 1425, 2552, 2905
NsiI ATGCAT 1 cut(s) 2819
NspI RCATGY 6 cut(s) 805, 1474, 1911, 2316, 2817, 3036
NspV TTCGAA 2 cut(s) 1834, 2243
PaeI GCATGC 2 cut(s) 1911, 3036
PagI TCATGA 1 cut(s) 2488
PceI AGGCCT 1 cut(s) 795
PciI ACATGT 1 cut(s) 2312
PctI GAATGC 2 cut(s) 2000, 2267
PdmI GAANNNNTTC 4 cut(s) 583, 743, 994, 2249
PflMI CCANNNNNTGG 1 cut(s) 2423
PkrI GCNGC 7 cut(s) 215, 1040, 1266, 1523, 1899, 2668, 2739
PleI GAGTC 6 cut(s) 170, 1122, 1338, 2439, 2586, 2606
PpsI GAGTC 6 cut(s) 170, 1122, 1338, 2439, 2586, 2606
PpuMI RGGWCCY 3 cut(s) 309, 1813, 2215
PscI ACATGT 1 cut(s) 2312
PsiI TTATAA 1 cut(s) 1019
Psp5II RGGWCCY 3 cut(s) 309, 1813, 2215
Psp6I CCWGG 2 cut(s) 1206, 1458
PspFI CCCAGC 1 cut(s) 856
PspGI CCWGG 2 cut(s) 1206, 1458
PspN4I GGNNCC 4 cut(s) 1307, 1652, 1815, 2653
PspPI GGNCC 4 cut(s) 309, 1204, 1813, 2215
PspPPI RGGWCCY 3 cut(s) 309, 1813, 2215
PstI CTGCAG 1 cut(s) 1413
PsuI RGATCY 5 cut(s) 382, 1305, 1420, 1711, 2845
RsaI GTAC 3 cut(s) 750, 2402, 2635
RsaNI GTAC 3 cut(s) 749, 2401, 2634
RseI CAYNNNNRTG 1 cut(s) 1469
SatI GCNGC 7 cut(s) 214, 1039, 1265, 1522, 1898, 2667, 2738
Sau96I GGNCC 4 cut(s) 309, 1204, 1813, 2215
SchI GAGTC 6 cut(s) 170, 1122, 1338, 2439, 2586, 2606
ScrFI CCNGG 3 cut(s) 1208, 1460, 2519
SfaNI GCATC 6 cut(s) 232, 476, 570, 1973, 3094, 3132
SfcI CTRYAG 2 cut(s) 1409, 2607
SfuI TTCGAA 2 cut(s) 1834, 2243
SinI GGWCC 3 cut(s) 309, 1813, 2215
SmiMI CAYNNNNRTG 1 cut(s) 1469
SmlI CTYRAG 3 cut(s) 257, 1690, 3017
SmoI CTYRAG 3 cut(s) 257, 1690, 3017
SpeI ACTAGT 2 cut(s) 1064, 2630
SphI GCATGC 2 cut(s) 1911, 3036
SseBI AGGCCT 1 cut(s) 795
SsiI CCGC 7 cut(s) 213, 350, 475, 2060, 2118, 2151, 2993
SspI AATATT 2 cut(s) 1197, 2452
SspMI CTAG 8 cut(s) 647, 786, 1065, 1709, 2357, 2631, 2867, 2910
StuI AGGCCT 1 cut(s) 795
StyD4I CCNGG 3 cut(s) 1206, 1458, 2517
StyI CCWWGG 3 cut(s) 1135, 2417, 3050
TaiI ACGT 2 cut(s) 407, 744
TaqI TCGA 5 cut(s) 758, 1342, 1834, 2243, 2937
TatI WGTACW 2 cut(s) 2400, 2633
TauI GCSGC 1 cut(s) 216
TscAI CASTG 9 cut(s) 79, 469, 835, 1849, 2332, 2341, 2481, 2501, 2770
TseFI GTSAC 3 cut(s) 1425, 2552, 2905
TseI GCWGC 6 cut(s) 1038, 1264, 1521, 1897, 2666, 2737
Tsp45I GTSAC 3 cut(s) 1425, 2552, 2905
TspGWI ACGGA 4 cut(s) 169, 1087, 1755, 3116
TspRI CASTG 9 cut(s) 79, 469, 835, 1849, 2332, 2341, 2481, 2501, 2770
Van91I CCANNNNNTGG 1 cut(s) 2423
Vha464I CTTAAG 1 cut(s) 3017
VpaK11BI GGWCC 3 cut(s) 309, 1813, 2215
XagI CCTNNNNNAGG 3 cut(s) 304, 789, 2081
XapI RAATTY 9 cut(s) 122, 417, 489, 839, 1013, 1189, 1269, 1596, 2968
XbaI TCTAGA 2 cut(s) 1708, 2866
XceI RCATGY 6 cut(s) 805, 1474, 1911, 2316, 2817, 3036
XcmI CCANNNNNNNNNTGG 1 cut(s) 2420
XmiI GTMKAC 5 cut(s) 778, 2166, 2606, 2715, 2781
XmnI GAANNNNTTC 4 cut(s) 583, 743, 994, 2249
XspI CTAG 8 cut(s) 647, 786, 1065, 1709, 2357, 2631, 2867, 2910
Zsp2I ATGCAT 1 cut(s) 2819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.