Rroxscaffold_4G00322910
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
53527537 .. 53529779
2243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00322910.1

Sequence Viewer

Length: 2214 bp
ATGACCATCCTTTTCCTTCTCACCAACCTTTTCCAACCTACTATCTTTGCAAATGCATTGAGCAATGAAACTGATCGATTCGCTTTGCTGAAATTCAAAGAATCCATAGCCATCGATCCAGATGGGCTGTTGAACTCATGGAATGACTCTGTCCACTTTTGCAAATGGCAAGGAATTACTTGTGGCAAATGGCATCAAAGAGTAACAGCTTTGAAACTACCAGGTGGTGATTTGCATGGAACCATATCACCTTACATTGGCAATCTCTCATTTCTCAGGACCTTCAACCTTTCAAACAACAGCTTCTCTGGCAAGATTCCACAGCAAGTTGAGAAATTGTTTCGACTGCGATATCTCAATATAAGTTCCAACTTGTTTGAGGGGGAATTCCACGTCATAAGCCTTGCGAAAAACCGCCTTACTGGCAAAATTCCTTCAGAGATTGGCTCGTTGATGAAGCTGGAGATTCTTAGTCTTCTAAGAAACAATCTAACAGGGGGCATCCCTCCTTCCTTGGGAAATCTTTCATCACTCACTTTACTTTCCTTGGGACAGAACAATTTGGTGGGCAGCATTCCAGATGTGCTGGGCCGATTGAGAAGCTTATCAATTTTTTCAATTGGTCGCAATAATCTCTCTGGTTTGATCCCTCCCTCCCTTTTTAACATATCATCTATGAACGTCCTCTCACTTCCAAAAAATAAGTTTAAGGGCAGTATACCGCCCGGTATAGGCCTAAACATGCCTAATCTCCTAATAATGTACCTTGGCGGAAATGAATTCTCTGGGAAAATCCCGGCCTCATTGTCCAATGCTTCTCAGCTTCAGTCACTTGATGTTGGGGAAAATAACTTTGTTGGCCGAGTTCCCGCAAGTTTTGGAAATTTTCCTAATCTCCAGTGGCTCAGCTTCTTTAGCAATAATCTAGGAAGTAATTCATCAAATGATTTGGGATTTATAACATTCTTGACAAATTGCAGCAATCTGGAAATGGTTTATCTGGGTGTTAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAATTTCTCAATCCAACTGACTCAACTCTACCTTGGGAGCAATCAAATAATGGGAGCGATTCCTGAAACACTAGGAAATCTCAACAGTTTGATAATCTTGAGCCTGGAATATAACCTGTTCAGAGGTATCATTCCAGCTTCTATTGGGAAGTTACAGAAGCTGCAAATATTATCTTTACGTTCCAATAGATTATCAGGCCGGATCCCATCTTCCATAGGAAACCTCACCCAATTGTCTCAACTCTACTTATCAGAAAATGAATTAGAAGGAAGCATTCCTCCAAATATTTGTAACTGCAAAAATATGCAGCTGATGGATATAGCAGACAATAAGCTTAGTGGAGATATACCATCACAGGTCATTGGTCTGTCCTCCTTCTCTATCTTGCTCAACTTATCGCAAAACTCGCTAACTGGCATTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTGGACATCTCTGATAATAATTTGACCGGAGGAATTCCAGAAATTATTGGAGGCTGTTTGAGCCTTGAATTTCTTTACCTACAAGGGAACCTCTTTCAAGGAATCATACCTTCTTCTTTGGCTGCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGAAACAACTTGTCAGGACACATTCCAAAAGACCTACAGAGGCTTCAATTCTTAATCCATTTGAACCTTTCGTTCAATAGTCTGGAGGGTGAGGTACCGAATGAAAGAGTTTTTCGAAATACAAGTGCAATATCATTGGAAGGAAATACCAAACTTTGTGGAGGTATTTCAAAATTGCAGCTACCAGCATGCCTCATTAAAGTACCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACAATTTCCTTGGTCGCTGGGTGCTCTCTTCTGTTTGCAGTCGTCTTAGCTGTTTATTGGAGGAGAAAAACTCAAAAGAAGAAACCATTAATAGCAGTGTCACCAATTAACTTCCTTCCAAAGGTTTCATACCAAACACTTCATCATGCTACTAGCGGATTCTCTCCGAGCAATCAAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTCTTAATCAAGAAGAAAACAACGTTGTTGCCATCAAGGTCCTCAACCTTCAACAGAGAGGTGCTTCCAAGAGTTTTGTGACGAATGCAATGCACTAA

Protein Analysis

737

Amino Acids

80.3

Weight (kDa)

9.56

Isoelectric Point (pI)

32.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 23 - 61 7.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 208 6.4e-10 Leucine-rich repeat region
LRR_8 PF13855 353 - 412 1.9e-08 Leucine rich repeat
LRR_14 PF23598 371 - 454 4.9e-08 Leucine-rich repeat region
LRR_14 PF23598 479 - 582 2.2e-07 Leucine-rich repeat region
LRR_8 PF13855 523 - 581 2.2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 959
Acc65I GGTACC 1 cut(s) 1753
AccB1I GGYRCC 1 cut(s) 1753
AccI GTMKAC 2 cut(s) 718, 2106
AciI CCGC 6 cut(s) 415, 722, 771, 870, 2058, 2091
AclI AACGTT 1 cut(s) 2139
AclWI GGATC 5 cut(s) 110, 640, 1240, 1253, 2092
AcoI YGGCCR 1 cut(s) 859
AcsI RAATTY 7 cut(s) 92, 386, 429, 779, 883, 1536, 1571
AcuI CTGAAG 4 cut(s) 420, 809, 1508, 1625
AfaI GTAC 3 cut(s) 764, 1755, 1863
AfiI CCNNNNNNNGG 4 cut(s) 257, 515, 731, 2023
AjiI CACGTC 1 cut(s) 394
AjnI CCWGG 2 cut(s) 220, 1146
Alw21I GWGCWC 1 cut(s) 1928
Alw26I GTCTC 1 cut(s) 1284
AlwI GGATC 5 cut(s) 110, 640, 1240, 1253, 2092
AlwNI CAGNNNCTG 1 cut(s) 1204
AoxI GGCC 5 cut(s) 589, 733, 798, 859, 1240
ApeKI GCWGC 6 cut(s) 570, 978, 1204, 1351, 1625, 1837
ApoI RAATTY 7 cut(s) 92, 386, 429, 779, 883, 1536, 1571
AseI ATTAAT 1 cut(s) 1991
Asp700I GAANNNNTTC 2 cut(s) 523, 934
Asp718I GGTACC 1 cut(s) 1753
AspS9I GGNCC 3 cut(s) 279, 589, 2155
AsuC2I CCSGG 2 cut(s) 726, 797
AsuHPI GGTGA 6 cut(s) 13, 239, 240, 1261, 1760, 1995
AsuII TTCGAA 1 cut(s) 1774
AvaII GGWCC 2 cut(s) 279, 2155
BamHI GGATCC 1 cut(s) 1245
BanI GGYRCC 1 cut(s) 1753
BbsI GAAGAC 2 cut(s) 467, 1631
Bbv12I GWGCWC 1 cut(s) 1928
BbvI GCAGC 6 cut(s) 582, 990, 1191, 1363, 1612, 1849
BccI CCATC 7 cut(s) 14, 116, 119, 1258, 1351, 1402, 2156
BcgI CGANNNNNNTGC 1 cut(s) 2188
BciT130I CCWGG 2 cut(s) 222, 1148
BcnI CCSGG 2 cut(s) 726, 797
BcoDI GTCTC 1 cut(s) 1284
BfaI CTAG 4 cut(s) 926, 1115, 1649, 2055
BfmI CTRYAG 2 cut(s) 1038, 1694
BglI GCCNNNNNGGC 1 cut(s) 423
BglII AGATCT 1 cut(s) 1651
BisI GCNGC 6 cut(s) 571, 979, 1205, 1352, 1626, 1838
BlpI GCTNAGC 1 cut(s) 905
BlsI GCNGC 6 cut(s) 572, 980, 1206, 1353, 1627, 1839
Bme1390I CCNGG 4 cut(s) 222, 726, 797, 1148
Bme18I GGWCC 2 cut(s) 279, 2155
BmgBI CACGTC 1 cut(s) 394
BmgT120I GGNCC 3 cut(s) 279, 589, 2155
BmiI GGNNCC 4 cut(s) 241, 1247, 1592, 1755
BmrFI CCNGG 4 cut(s) 222, 726, 797, 1148
BmsI GCATC 2 cut(s) 202, 510
BpiI GAAGAC 2 cut(s) 467, 1631
BplI GAGNNNNNCTC 4 cut(s) 431, 463, 1957, 1989
BpmI CTGGAG 3 cut(s) 482, 881, 1763
Bpu1102I GCTNAGC 1 cut(s) 905
Bpu14I TTCGAA 1 cut(s) 1774
BpuEI CTTGAG 1 cut(s) 1162
BpuMI CCSGG 2 cut(s) 726, 797
Bsa29I ATCGAT 2 cut(s) 76, 114
BsaJI CCNNGG 5 cut(s) 513, 546, 766, 1075, 1911
BsaWI WCCGGW 1 cut(s) 1529
Bsc4I CCNNNNNNNGG 4 cut(s) 257, 515, 731, 2023
Bse1I ACTGG 4 cut(s) 427, 898, 1462, 1509
Bse3DI GCAATG 2 cut(s) 70, 2211
BseBI CCWGG 2 cut(s) 222, 1148
BseCI ATCGAT 2 cut(s) 76, 114
BseDI CCNNGG 5 cut(s) 513, 546, 766, 1075, 1911
BseGI GGATG 2 cut(s) 6, 501
BseLI CCNNNNNNNGG 4 cut(s) 257, 515, 731, 2023
BseMI GCAATG 2 cut(s) 70, 2211
BseMII CTCAG 3 cut(s) 289, 833, 919
BseNI ACTGG 4 cut(s) 427, 898, 1462, 1509
BseRI GAGGAG 1 cut(s) 1978
BseXI GCAGC 6 cut(s) 582, 990, 1191, 1363, 1612, 1849
BseYI CCCAGC 2 cut(s) 586, 1919
BshFI GGCC 5 cut(s) 591, 735, 800, 861, 1242
BshNI GGYRCC 1 cut(s) 1753
BshVI ATCGAT 2 cut(s) 76, 114
BsiHKAI GWGCWC 1 cut(s) 1928
BsiSI CCGG 4 cut(s) 726, 797, 1243, 1530
BslFI GGGAC 1 cut(s) 564
BslI CCNNNNNNNGG 4 cut(s) 257, 515, 731, 2023
BsmAI GTCTC 1 cut(s) 1284
BsmFI GGGAC 1 cut(s) 564
BsmI GAATGC 4 cut(s) 573, 1317, 1461, 2206
BsnI GGCC 5 cut(s) 591, 735, 800, 861, 1242
Bsp119I TTCGAA 1 cut(s) 1774
Bsp1286I GDGCHC 1 cut(s) 1928
Bsp143I GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
Bsp1720I GCTNAGC 1 cut(s) 905
BspACI CCGC 6 cut(s) 415, 722, 771, 870, 2058, 2091
BspANI GGCC 5 cut(s) 591, 735, 800, 861, 1242
BspCNI CTCAG 3 cut(s) 288, 832, 918
BspDI ATCGAT 2 cut(s) 76, 114
BspLI GGNNCC 4 cut(s) 241, 1247, 1592, 1755
BspPI GGATC 5 cut(s) 110, 640, 1240, 1253, 2092
BspT104I TTCGAA 1 cut(s) 1774
BspT107I GGYRCC 1 cut(s) 1753
BsrDI GCAATG 2 cut(s) 70, 2211
BsrI ACTGG 4 cut(s) 427, 898, 1462, 1509
BssECI CCNNGG 5 cut(s) 513, 546, 766, 1075, 1911
BssMI GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
BssNAI GTATAC 2 cut(s) 719, 2107
BssT1I CCWWGG 5 cut(s) 513, 546, 766, 1075, 1911
Bst1107I GTATAC 2 cut(s) 719, 2107
Bst2UI CCWGG 2 cut(s) 222, 1148
Bst4CI ACNGT 1 cut(s) 1130
Bst6I CTCTTC 1 cut(s) 1935
BstBI TTCGAA 1 cut(s) 1774
BstC8I GCNNGC 1 cut(s) 1849
BstDEI CTNAG 7 cut(s) 275, 470, 479, 819, 905, 1379, 1948
BstENI CCTNNNNNAGG 1 cut(s) 2021
BstF5I GGATG 2 cut(s) 6, 501
BstKTI GATC 6 cut(s) 76, 118, 648, 1248, 1654, 2087
BstMAI GTCTC 1 cut(s) 1284
BstMBI GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
BstMWI GCNNNNNNNGC 6 cut(s) 309, 423, 915, 1450, 1563, 2097
BstNI CCWGG 2 cut(s) 222, 1148
BstNSI RCATGY 2 cut(s) 745, 1851
BstSCI CCNGG 4 cut(s) 220, 724, 795, 1146
BstSFI CTRYAG 2 cut(s) 1038, 1694
BstV1I GCAGC 6 cut(s) 582, 990, 1191, 1363, 1612, 1849
BstV2I GAAGAC 2 cut(s) 467, 1631
BstX2I RGATCY 2 cut(s) 1245, 1651
BstYI RGATCY 2 cut(s) 1245, 1651
BstZ17I GTATAC 2 cut(s) 719, 2107
Bsu15I ATCGAT 2 cut(s) 76, 114
BsuRI GGCC 5 cut(s) 591, 735, 800, 861, 1242
BsuTUI ATCGAT 2 cut(s) 76, 114
BtrI CACGTC 1 cut(s) 394
BtsCI GGATG 2 cut(s) 6, 501
BtsI GCAGTG 1 cut(s) 2004
BtsIMutI CAGTG 3 cut(s) 905, 1502, 2004
Cac8I GCNNGC 1 cut(s) 1849
CaiI CAGNNNCTG 1 cut(s) 1204
Cfr13I GGNCC 3 cut(s) 279, 589, 2155
ClaI ATCGAT 2 cut(s) 76, 114
CsiI ACCWGGT 1 cut(s) 220
Csp6I GTAC 3 cut(s) 763, 1754, 1862
CspCI CAANNNNNGTGG 2 cut(s) 1798, 1833
CviAII CATG 6 cut(s) 138, 236, 742, 1848, 1883, 2048
CviQI GTAC 3 cut(s) 763, 1754, 1862
DdeI CTNAG 7 cut(s) 275, 470, 479, 819, 905, 1379, 1948
DpnI GATC 6 cut(s) 75, 117, 647, 1247, 1653, 2086
DpnII GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
EaeI YGGCCR 1 cut(s) 859
Eam1104I CTCTTC 1 cut(s) 1935
EarI CTCTTC 1 cut(s) 1935
EciI GGCGGA 1 cut(s) 786
Eco130I CCWWGG 5 cut(s) 513, 546, 766, 1075, 1911
Eco147I AGGCCT 1 cut(s) 735
Eco32I GATATC 1 cut(s) 353
Eco47I GGWCC 2 cut(s) 279, 2155
Eco57I CTGAAG 4 cut(s) 420, 809, 1508, 1625
EcoNI CCTNNNNNAGG 1 cut(s) 2021
EcoO109I RGGNCCY 2 cut(s) 279, 2155
EcoRI GAATTC 3 cut(s) 386, 779, 1536
EcoRII CCWGG 2 cut(s) 220, 1146
EcoRV GATATC 1 cut(s) 353
EcoT14I CCWWGG 5 cut(s) 513, 546, 766, 1075, 1911
EcoT22I ATGCAT 1 cut(s) 58
ErhI CCWWGG 5 cut(s) 513, 546, 766, 1075, 1911
FaeI CATG 6 cut(s) 141, 239, 745, 1851, 1886, 2051
FalI AAGNNNNNCTT 2 cut(s) 2103, 2135
FaqI GGGAC 1 cut(s) 564
FatI CATG 6 cut(s) 137, 235, 741, 1847, 1882, 2047
FauI CCCGC 1 cut(s) 877
FblI GTMKAC 2 cut(s) 718, 2106
Fnu4HI GCNGC 6 cut(s) 571, 979, 1205, 1352, 1626, 1838
FokI GGATG 1 cut(s) 488
Fsp4HI GCNGC 6 cut(s) 571, 979, 1205, 1352, 1626, 1838
FspBI CTAG 4 cut(s) 926, 1115, 1649, 2055
GluI GCNGC 6 cut(s) 571, 979, 1205, 1352, 1626, 1838
GsaI CCCAGC 2 cut(s) 590, 1923
GsuI CTGGAG 3 cut(s) 482, 881, 1763
HaeIII GGCC 5 cut(s) 591, 735, 800, 861, 1242
HapII CCGG 4 cut(s) 726, 797, 1243, 1530
Hin1II CATG 6 cut(s) 141, 239, 745, 1851, 1886, 2051
HincII GTYRAC 1 cut(s) 1009
HindII GTYRAC 1 cut(s) 1009
HindIII AAGCTT 2 cut(s) 601, 1376
HpaI GTTAAC 1 cut(s) 1009
HpaII CCGG 4 cut(s) 726, 797, 1243, 1530
HphI GGTGA 6 cut(s) 13, 239, 240, 1261, 1760, 1995
Hpy166II GTNNAC 5 cut(s) 154, 719, 1009, 1902, 2107
Hpy188I TCNGA 5 cut(s) 439, 1166, 1297, 1516, 2070
Hpy8I GTNNAC 5 cut(s) 154, 719, 1009, 1902, 2107
HpyCH4III ACNGT 1 cut(s) 1130
HpyCH4IV ACGT 4 cut(s) 393, 681, 1222, 2139
HpyF10VI GCNNNNNNNGC 6 cut(s) 309, 423, 915, 1450, 1563, 2097
HpyF3I CTNAG 7 cut(s) 275, 470, 479, 819, 905, 1379, 1948
HpySE526I ACGT 4 cut(s) 393, 681, 1222, 2139
Hsp92II CATG 6 cut(s) 141, 239, 745, 1851, 1886, 2051
KpnI GGTACC 1 cut(s) 1757
KspAI GTTAAC 1 cut(s) 1009
Kzo9I GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
LmnI GCTCC 2 cut(s) 1080, 1097
Lsp1109I GCAGC 6 cut(s) 582, 990, 1191, 1363, 1612, 1849
LweI GCATC 2 cut(s) 202, 510
MabI ACCWGGT 1 cut(s) 220
MaeI CTAG 4 cut(s) 926, 1115, 1649, 2055
MaeII ACGT 4 cut(s) 393, 681, 1222, 2139
MaeIII GTNAC 6 cut(s) 202, 828, 1194, 1334, 2001, 2194
MalI GATC 6 cut(s) 75, 117, 647, 1247, 1653, 2086
MboI GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
MboII GAAGA 8 cut(s) 467, 1245, 1501, 1608, 1631, 1922, 1993, 2141
MfeI CAATTG 2 cut(s) 618, 1274
MflI RGATCY 2 cut(s) 1245, 1651
MhlI GDGCHC 1 cut(s) 1928
MlyI GAGTC 2 cut(s) 140, 1057
MmeI TCCRAC 3 cut(s) 58, 393, 1081
Mph1103I ATGCAT 1 cut(s) 58
MroXI GAANNNNTTC 2 cut(s) 523, 934
MseI TTAA 8 cut(s) 663, 708, 1008, 1712, 1857, 1991, 2010, 2121
MspA1I CMGCKG 1 cut(s) 1354
MspI CCGG 4 cut(s) 726, 797, 1243, 1530
MspR9I CCNGG 4 cut(s) 222, 726, 797, 1148
MunI CAATTG 2 cut(s) 618, 1274
Mva1269I GAATGC 4 cut(s) 573, 1317, 1461, 2206
MvaI CCWGG 2 cut(s) 222, 1148
MwoI GCNNNNNNNGC 6 cut(s) 309, 423, 915, 1450, 1563, 2097
NciI CCSGG 2 cut(s) 726, 797
NdeII GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
NlaIII CATG 6 cut(s) 141, 239, 745, 1851, 1886, 2051
NlaIV GGNNCC 4 cut(s) 241, 1247, 1592, 1755
NmeAIII GCCGAG 1 cut(s) 887
NmuCI GTSAC 3 cut(s) 828, 2001, 2194
NsiI ATGCAT 1 cut(s) 58
NspI RCATGY 2 cut(s) 745, 1851
NspV TTCGAA 1 cut(s) 1774
PaeI GCATGC 1 cut(s) 1851
PceI AGGCCT 1 cut(s) 735
PctI GAATGC 4 cut(s) 573, 1317, 1461, 2206
PdmI GAANNNNTTC 2 cut(s) 523, 934
PfeI GAWTC 8 cut(s) 78, 101, 316, 466, 1102, 1605, 2061, 2116
PflFI GACNNNGTC 1 cut(s) 149
PkrI GCNGC 6 cut(s) 572, 980, 1206, 1353, 1627, 1839
PleI GAGTC 2 cut(s) 140, 1057
PpsI GAGTC 2 cut(s) 140, 1057
PpuMI RGGWCCY 2 cut(s) 279, 2155
PshBI ATTAAT 1 cut(s) 1991
PsiI TTATAA 1 cut(s) 959
Psp1406I AACGTT 1 cut(s) 2139
Psp5II RGGWCCY 2 cut(s) 279, 2155
Psp6I CCWGG 2 cut(s) 220, 1146
PspFI CCCAGC 2 cut(s) 586, 1919
PspGI CCWGG 2 cut(s) 220, 1146
PspN4I GGNNCC 4 cut(s) 241, 1247, 1592, 1755
PspPI GGNCC 3 cut(s) 279, 589, 2155
PspPPI RGGWCCY 2 cut(s) 279, 2155
PstNI CAGNNNCTG 1 cut(s) 1204
PsuI RGATCY 2 cut(s) 1245, 1651
PsyI GACNNNGTC 1 cut(s) 149
PvuII CAGCTG 1 cut(s) 1354
RsaI GTAC 3 cut(s) 764, 1755, 1863
RsaNI GTAC 3 cut(s) 763, 1754, 1862
SaqAI TTAA 8 cut(s) 663, 708, 1008, 1712, 1857, 1991, 2010, 2121
SatI GCNGC 6 cut(s) 571, 979, 1205, 1352, 1626, 1838
Sau3AI GATC 6 cut(s) 73, 115, 645, 1245, 1651, 2084
Sau96I GGNCC 3 cut(s) 279, 589, 2155
SchI GAGTC 2 cut(s) 140, 1057
ScrFI CCNGG 4 cut(s) 222, 726, 797, 1148
SduI GDGCHC 1 cut(s) 1928
SexAI ACCWGGT 1 cut(s) 220
SfaNI GCATC 2 cut(s) 202, 510
SfcI CTRYAG 2 cut(s) 1038, 1694
SfuI TTCGAA 1 cut(s) 1774
SinI GGWCC 2 cut(s) 279, 2155
SmlI CTYRAG 1 cut(s) 1141
SmoI CTYRAG 1 cut(s) 1141
SphI GCATGC 1 cut(s) 1851
SseBI AGGCCT 1 cut(s) 735
SsiI CCGC 6 cut(s) 415, 722, 771, 870, 2058, 2091
SspI AATATT 2 cut(s) 1212, 1330
SspMI CTAG 4 cut(s) 926, 1115, 1649, 2055
StuI AGGCCT 1 cut(s) 735
StyD4I CCNGG 4 cut(s) 220, 724, 795, 1146
StyI CCWWGG 5 cut(s) 513, 546, 766, 1075, 1911
TaaI ACNGT 1 cut(s) 1130
TaiI ACGT 4 cut(s) 396, 684, 1225, 2142
TaqI TCGA 4 cut(s) 76, 114, 343, 1774
TfiI GAWTC 8 cut(s) 78, 101, 316, 466, 1102, 1605, 2061, 2116
Tru1I TTAA 8 cut(s) 663, 708, 1008, 1712, 1857, 1991, 2010, 2121
Tru9I TTAA 8 cut(s) 663, 708, 1008, 1712, 1857, 1991, 2010, 2121
TscAI CASTG 3 cut(s) 905, 1509, 2004
TseFI GTSAC 3 cut(s) 828, 2001, 2194
TseI GCWGC 6 cut(s) 570, 978, 1204, 1351, 1625, 1837
Tsp45I GTSAC 3 cut(s) 828, 2001, 2194
TspRI CASTG 3 cut(s) 905, 1509, 2004
Tth111I GACNNNGTC 1 cut(s) 149
VpaK11BI GGWCC 2 cut(s) 279, 2155
VspI ATTAAT 1 cut(s) 1991
XagI CCTNNNNNAGG 1 cut(s) 2021
XapI RAATTY 7 cut(s) 92, 386, 429, 779, 883, 1536, 1571
XbaI TCTAGA 1 cut(s) 1648
XceI RCATGY 2 cut(s) 745, 1851
XmiI GTMKAC 2 cut(s) 718, 2106
XmnI GAANNNNTTC 2 cut(s) 523, 934
XspI CTAG 4 cut(s) 926, 1115, 1649, 2055
Zsp2I ATGCAT 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.