Rmu_co8060564.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8060564.1
Physical Location & Seq
Reverse (-)
2 .. 260
259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8060564.1_g000001.1.cds

Sequence Viewer

Length: 259 bp
atgttcacaggaagaagacctatcgatgatatgtttaaagatggtttgaacctccataattttgtcaagatggccataccagaaacagtgatgcagattgtagatcctactcttcttgccactttagaagagacagcacctgcaacatcacaaaatgtagtgaactacatcaactgttacaataatgaaatcgaagcagttgaagaaaacattgacaatgagaatttaagcaagatgaatactgtgtggaagtgcatac

Protein Analysis

86

Amino Acids

9.82

Weight (kDa)

4.38

Isoelectric Point (pI)

49.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 148
Acc36I ACCTGC 1 cut(s) 148
AclWI GGATC 1 cut(s) 98
AcoI YGGCCR 1 cut(s) 72
AcsI RAATTY 1 cut(s) 223
AgsI TTSAA 2 cut(s) 49, 203
Alw26I GTCTC 1 cut(s) 125
AlwI GGATC 1 cut(s) 98
AlwNI CAGNNNCTG 1 cut(s) 140
AoxI GGCC 1 cut(s) 72
ApoI RAATTY 1 cut(s) 223
BalI TGGCCA 1 cut(s) 74
BbsI GAAGAC 1 cut(s) 22
BccI CCATC 2 cut(s) 35, 64
BcoDI GTCTC 1 cut(s) 125
BfuAI ACCTGC 1 cut(s) 148
BmsI GCATC 1 cut(s) 81
BpiI GAAGAC 1 cut(s) 22
Bsa29I ATCGAT 1 cut(s) 24
BseCI ATCGAT 1 cut(s) 24
BshFI GGCC 1 cut(s) 74
BshVI ATCGAT 1 cut(s) 24
BsmAI GTCTC 1 cut(s) 125
BsnI GGCC 1 cut(s) 74
Bsp143I GATC 1 cut(s) 103
BspANI GGCC 1 cut(s) 74
BspDI ATCGAT 1 cut(s) 24
BspMI ACCTGC 1 cut(s) 148
BspPI GGATC 1 cut(s) 98
BssMI GATC 1 cut(s) 103
Bst4CI ACNGT 3 cut(s) 88, 176, 244
Bst6I CTCTTC 2 cut(s) 117, 123
BstKTI GATC 1 cut(s) 106
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 1 cut(s) 103
BstV2I GAAGAC 1 cut(s) 22
BstX2I RGATCY 1 cut(s) 103
BstYI RGATCY 1 cut(s) 103
Bsu15I ATCGAT 1 cut(s) 24
BsuRI GGCC 1 cut(s) 74
BsuTUI ATCGAT 1 cut(s) 24
BtsIMutI CAGTG 1 cut(s) 93
BveI ACCTGC 1 cut(s) 148
CaiI CAGNNNCTG 1 cut(s) 140
ClaI ATCGAT 1 cut(s) 24
CviJI RGCY 1 cut(s) 74
CviKI_1 RGCY 1 cut(s) 74
DpnI GATC 1 cut(s) 105
DpnII GATC 1 cut(s) 103
DraI TTTAAA 1 cut(s) 37
EaeI YGGCCR 1 cut(s) 72
Eam1104I CTCTTC 2 cut(s) 117, 123
EarI CTCTTC 2 cut(s) 117, 123
FaiI YATR 4 cut(s) 32, 57, 77, 257
HaeIII GGCC 1 cut(s) 74
Hpy166II GTNNAC 2 cut(s) 6, 163
Hpy188III TCNNGA 1 cut(s) 67
Hpy8I GTNNAC 2 cut(s) 6, 163
HpyCH4III ACNGT 3 cut(s) 88, 176, 244
HpyCH4V TGCA 3 cut(s) 94, 143, 255
Kzo9I GATC 1 cut(s) 103
LpnPI CCDG 2 cut(s) 93, 153
LweI GCATC 1 cut(s) 81
MaeIII GTNAC 1 cut(s) 176
MalI GATC 1 cut(s) 105
MboI GATC 1 cut(s) 103
MboII GAAGA 5 cut(s) 24, 27, 104, 140, 215
MflI RGATCY 1 cut(s) 103
MlsI TGGCCA 1 cut(s) 74
MluCI AATT 2 cut(s) 58, 223
MluNI TGGCCA 1 cut(s) 74
MnlI CCTC 1 cut(s) 62
Mox20I TGGCCA 1 cut(s) 74
MscI TGGCCA 1 cut(s) 74
MseI TTAA 2 cut(s) 36, 227
Msp20I TGGCCA 1 cut(s) 74
NdeII GATC 1 cut(s) 103
PaqCI CACCTGC 1 cut(s) 148
PstNI CAGNNNCTG 1 cut(s) 140
PsuI RGATCY 1 cut(s) 103
SaqAI TTAA 2 cut(s) 36, 227
Sau3AI GATC 1 cut(s) 103
SetI ASST 3 cut(s) 22, 54, 142
SfaNI GCATC 1 cut(s) 81
SgeI CNNG 6 cut(s) 21, 79, 92, 128, 152, 244
Sse9I AATT 2 cut(s) 58, 223
TaaI ACNGT 3 cut(s) 88, 176, 244
TaqI TCGA 2 cut(s) 24, 192
TasI AATT 2 cut(s) 58, 223
Tru1I TTAA 2 cut(s) 36, 227
Tru9I TTAA 2 cut(s) 36, 227
TscAI CASTG 1 cut(s) 93
TspDTI ATGAA 2 cut(s) 201, 251
TspRI CASTG 1 cut(s) 93
XapI RAATTY 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.