Rroxscaffold_7G00193490
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
35009103 .. 35012752
3650 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00193490.1

Sequence Viewer

Length: 2961 bp
ATGGAGCTTCATATGCTCAACTTCTGTGCATTTTGGTTTACCTACCTTCATTTCCTGACCACCCTTTTCCTTCTCACCAACCTTTTCCAACCTGCCATCTTTGCAAATGCATTGAGCAATGAAACCGATCACTTGGCTTTGCTGAAATTCAAAGATTGCACAGCCACCTATCCAGATGGGCTGTTGAACTCATGGAATGACTCCGTTCACTTCTGCAAATGGCAAGGAATTACTTGCAGCAAACGGCATCAAAGAGTAATAGCCTTGAACCTACAAGGCTATGATTTGCATGGAATCATATCACCATACATTGGCAACCTCTCCTTCCTTAGGTTCATCAACCTTCGAAACAACAGTCTCTCAGGCAACATTCCGCAACAAGTTGAACATTTATTCCGACTGCGACATCTCAATCTCAGTAGCAACATGTTGGAGGGGGGAATTCCAGTCAACTTGACCTTGTGTGCGGAACTGAGCATCATAAGTATTGGACAAAACCGCCTTACCGGCAAAATTCCTTCAGAGATTGGGTCATTGAGGAAGCTTGTGCATCTCAATCTAACGGAAAATAGTCTGACGGGACCCATCCCACCTTCCTTGGGAAATCTTTCATCAGTCACACAGCTGACCTTCTCATTTAACAATTTGGTGGGAACAATTCCAGAGGAGATAGGCCGATTGAGAAGCTTATCACATTTTGCAATTGGTCCCAATAATCTCTCTGGTATGATCCCTCCCTCCCTTTTTAACATATCATCTATGAACGTTATCTCAGTTACGGGTAATAAGTTTAAGGGTAGTATTCCACCTGGTATAGGCTTAAACATGCCTAATCTCCGACTGCTATTTCTTGGTGGAAATGAATTCTCTGGACAAATCCCAGCTTCACTTCCCAATGCTTCTCAGTTTCAGATGCTTGATGCTGCGAAAAATAATTTTGTTGGGCAAGTTCCAGCAAGTTTTGGAAATTTTCCTAGTCTCCAGCGGCTCAGCTTAGGCCACAATAAGCTAGGAAGTAATTCGTCAAATGATTTGGGATTTATAACATTCTTGACAAATTGCAGCAATCTGGAGATCCTTGCTCTGACTTATAACAAGTTTGGAGGTGTTTTACCTAACTCTGTAGCCAATTTCTCAACCCAACTGACTCAACTCTACCTTGGGGGCAATCAAATAGTGGGAACGATTCCTGAAACATTAGGAAATCTCAACAATTTAATACACTTGAGCCTGGACGTAAACTTGTTCACAGGTATCATTCCAGCTTCTTTTGGGAAGTTACAAAAACTGCAAAGATTGTATTTAAATTCCAATAGATTATCAGGACGGATCCCATCTTCTCTTGGAAACCTCACCCAATTGTTTGTACTCTATTTATCAGAAAATGAATTAGAAGGAAGCATTCATCCAAATATTGGTAACTGCAAAAATCTGCAGGTGATGGATATATCACACAATAAGCTTAGTGGAGATATACCATCACAAGTCATTGGTCTATCCTCCTTTGTCTTGCTCAACTTATCGCAAAACTCGCTAACAGGCATTTTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTGGACATCTCTGAAAATAATTTGACTGGAGGAATTCCAGAAATTATTGGAGGACTTATTCCAAAAGACCTACAGAGGCTTCCATTCTTGATCTATTTGAACCTTTCGTTTAATAACCTGGACGGTGAGCTACCAGCATGCCCCATCAAAGTACCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACAATTTCTGTAGTCGCTGGATGCTCTCTTCTATTTGCAGTGATCATAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAATAAACCGTTATCTGTAGTGTCATCAATCAAATTCCTTCCAAAGGTTTCATACCAGACACTTCATCAAGCTACTGGCGGATTCTCTCTGAGCAATCATATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATAATTGATCAAGAAGAAAACAATGTTGTTGCCATAAAGGTTCTCAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTCGTGGCAGAATGCAATGCACTGAGAAATATCCAGCACAGGAACCTTGTGAAGATCTTAACTTGTTGCTCCAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTACATGTCAAATGGAAGTTTAGAGGAGTGGCTACATAGAGAAGACCAATCAAGGAGTTTGAACCTTCTTCAAAGACTGAATATTGCTGTTGATGTGGCTTCTGTGTTGTGTTATCTTCATGACCATTGTGAACCACAAGTCATTCACTGTGACATGAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTTGCTCATGTTGGTGATTTTGGGTTAGCAAGACTCATCTCAATGACCACGGACTCCTCTCAAAATCAAAGTAGCACAGTTGGGATAAAGGGAACAATTGGCTATGCTGCTCCAGAGTATGCGAGTGGTGTTAAGCCATCAAGAGAAGGGGATGTATATAGTTATGGGGTGCTTGTGTTGGAAATGTTCACAGGAAGAAGACCTATTGACAAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAAGATGGCCATACCAGGAAGAGTGATGCAGATTGTAGATCCAACTCTTCTTGCCACTTTAGAAGAGATAGCACCTGCAACATCACAAAATGTAGTGAACTCCACCAAAGGTTACAATAATGAAATCAAAGCAGTTGAAGAAAACATTGACAATGAGAATTTAAGCAAGAAGAACACTTATGTGTGGAAGTGCATACTTCCAGCCTTTAAGATTGGACTTGCATGCTCAGAAGAATCACCAAGGAATCGAATGTCTATGAAGGAGGTCCACAGGAAGCTACACCATATAAAAGATGCTTATACTGGTGTTGACATCTGTCAAGAAAGGCCAAGAAAAAGCTAA

Protein Analysis

986

Amino Acids

108.65

Weight (kDa)

8.79

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 80 2.6e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 102 - 235 2.6e-09 Leucine-rich repeat region
LRR_14 PF23598 353 - 459 1.2e-06 Leucine-rich repeat region
LRR_8 PF13855 381 - 440 6.5e-10 Leucine rich repeat
LRR_8 PF13855 477 - 536 1.8e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 648 - 864 1.9e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 648 - 869 1.9e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1043, 1092
AarI CACCTGC 2 cut(s) 1426, 2701
Acc36I ACCTGC 3 cut(s) 100, 1426, 2701
AccB7I CCANNNNNTGG 2 cut(s) 311, 1415
AccI GTMKAC 1 cut(s) 1980
AciI CCGC 6 cut(s) 374, 467, 499, 985, 1932, 1965
AclI AACGTT 1 cut(s) 765
AclWI GGATC 6 cut(s) 724, 1069, 1324, 1337, 1966, 2651
AcoI YGGCCR 1 cut(s) 2625
AcsI RAATTY 9 cut(s) 146, 441, 513, 863, 967, 1306, 1617, 1886, 2776
AcuI CTGAAG 2 cut(s) 504, 1589
AfaI GTAC 3 cut(s) 1368, 1737, 2183
AfiI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 1415, 1897
AflIII ACRYGT 2 cut(s) 426, 2184
AjnI CCWGG 4 cut(s) 808, 1230, 1701, 2632
AleI CACNNNNGTG 1 cut(s) 2798
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
Alw26I GTCTC 2 cut(s) 362, 983
AlwI GGATC 6 cut(s) 724, 1069, 1324, 1337, 1966, 2651
AoxI GGCC 4 cut(s) 673, 997, 2625, 2945
ApeKI GCWGC 4 cut(s) 237, 923, 1062, 2477
ApoI RAATTY 9 cut(s) 146, 441, 513, 863, 967, 1306, 1617, 1886, 2776
ArsI GACNNNNNNTTYG 2 cut(s) 340, 372
Asp700I GAANNNNTTC 2 cut(s) 607, 1018
AspS9I GGNCC 3 cut(s) 581, 707, 2884
AsuHPI GGTGA 7 cut(s) 67, 294, 1345, 1450, 1721, 2396, 2847
AsuII TTCGAA 1 cut(s) 346
AvaII GGWCC 3 cut(s) 581, 707, 2884
AxyI CCTNAGG 1 cut(s) 329
BalI TGGCCA 1 cut(s) 2627
BamHI GGATCC 1 cut(s) 1329
BbsI GAAGAC 2 cut(s) 2229, 2575
BbvI GCAGC 4 cut(s) 249, 910, 1074, 2464
BccI CCATC 9 cut(s) 104, 170, 593, 1342, 1435, 1486, 1736, 2515, 2617
BceAI ACGGC 1 cut(s) 260
BciT130I CCWGG 4 cut(s) 810, 1232, 1703, 2634
BclI TGATCA 2 cut(s) 1818, 1996
BcoDI GTCTC 2 cut(s) 362, 983
BfaI CTAG 3 cut(s) 975, 1010, 2171
BfmI CTRYAG 5 cut(s) 1122, 1433, 1655, 1785, 1869
BfuAI ACCTGC 3 cut(s) 100, 1426, 2701
BglI GCCNNNNNGGC 1 cut(s) 507
BglII AGATCT 1 cut(s) 2118
BisI GCNGC 5 cut(s) 238, 924, 986, 1063, 2478
BlpI GCTNAGC 1 cut(s) 989
BlsI GCNGC 5 cut(s) 239, 925, 987, 1064, 2479
Bme1390I CCNGG 4 cut(s) 810, 1232, 1703, 2634
Bme18I GGWCC 3 cut(s) 581, 707, 2884
BmgT120I GGNCC 3 cut(s) 581, 707, 2884
BmiI GGNNCC 5 cut(s) 582, 583, 709, 1331, 2108
BmrFI CCNGG 4 cut(s) 810, 1232, 1703, 2634
BmsI GCATC 8 cut(s) 256, 486, 559, 903, 910, 1787, 2634, 2902
BoxI GACNNNNGTC 1 cut(s) 2934
BpiI GAAGAC 2 cut(s) 2229, 2575
BplI GAGNNNNNCTC 2 cut(s) 1831, 1863
BpmI CTGGAG 5 cut(s) 965, 1091, 1632, 2119, 2466
Bpu10I CCTNAGC 1 cut(s) 994
Bpu1102I GCTNAGC 1 cut(s) 989
Bpu14I TTCGAA 1 cut(s) 346
BpuEI CTTGAG 1 cut(s) 1246
BsaJI CCNNGG 4 cut(s) 597, 1159, 2418, 2858
Bsc4I CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 1415, 1897
Bse118I RCCGGY 1 cut(s) 506
Bse1I ACTGG 5 cut(s) 446, 1590, 1615, 1933, 2926
Bse21I CCTNAGG 1 cut(s) 329
Bse3DI GCAATG 3 cut(s) 124, 2086, 2353
BseBI CCWGG 4 cut(s) 810, 1232, 1703, 2634
BseDI CCNNGG 4 cut(s) 597, 1159, 2418, 2858
BseGI GGATG 4 cut(s) 585, 1405, 1802, 2527
BseLI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 1415, 1897
BseMI GCAATG 3 cut(s) 124, 2086, 2353
BseMII CTCAG 9 cut(s) 375, 430, 464, 786, 917, 1003, 1934, 2078, 2859
BseNI ACTGG 5 cut(s) 446, 1590, 1615, 1933, 2926
BseRI GAGGAG 4 cut(s) 680, 1852, 2219, 2416
BseXI GCAGC 4 cut(s) 249, 910, 1074, 2464
BseYI CCCAGC 1 cut(s) 880
BshFI GGCC 4 cut(s) 675, 999, 2627, 2947
BsiSI CCGG 1 cut(s) 507
BslFI GGGAC 2 cut(s) 594, 693
BslI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 1415, 1897
BsmAI GTCTC 2 cut(s) 362, 983
BsmFI GGGAC 2 cut(s) 594, 693
BsmI GAATGC 2 cut(s) 1401, 2081
BsnI GGCC 4 cut(s) 675, 999, 2627, 2947
Bsp119I TTCGAA 1 cut(s) 346
Bsp1720I GCTNAGC 1 cut(s) 989
BspACI CCGC 6 cut(s) 374, 467, 499, 985, 1932, 1965
BspANI GGCC 4 cut(s) 675, 999, 2627, 2947
BspCNI CTCAG 9 cut(s) 374, 429, 465, 785, 916, 1002, 1935, 2079, 2858
BspHI TCATGA 1 cut(s) 2299
BspLI GGNNCC 5 cut(s) 582, 583, 709, 1331, 2108
BspMAI CTGCAG 1 cut(s) 1437
BspMI ACCTGC 3 cut(s) 100, 1426, 2701
BspPI GGATC 6 cut(s) 724, 1069, 1324, 1337, 1966, 2651
BspT104I TTCGAA 1 cut(s) 346
BsrDI GCAATG 3 cut(s) 124, 2086, 2353
BsrFI RCCGGY 1 cut(s) 506
BsrI ACTGG 5 cut(s) 446, 1590, 1615, 1933, 2926
BssAI RCCGGY 1 cut(s) 506
BssECI CCNNGG 4 cut(s) 597, 1159, 2418, 2858
BssNAI GTATAC 1 cut(s) 1981
BssT1I CCWWGG 3 cut(s) 597, 1159, 2858
Bst1107I GTATAC 1 cut(s) 1981
Bst2UI CCWGG 4 cut(s) 810, 1232, 1703, 2634
Bst4CI ACNGT 5 cut(s) 356, 1709, 1863, 2330, 2449
Bst6I CTCTTC 4 cut(s) 1809, 2632, 2670, 2676
BstBI TTCGAA 1 cut(s) 346
BstC8I GCNNGC 2 cut(s) 1723, 2842
BstDSI CCRYGG 1 cut(s) 2418
BstENI CCTNNNNNAGG 3 cut(s) 328, 813, 1895
BstF5I GGATG 4 cut(s) 585, 1405, 1802, 2527
BstMAI GTCTC 2 cut(s) 362, 983
BstMWI GCNNNNNNNGC 5 cut(s) 13, 101, 507, 1531, 1971
BstNI CCWGG 4 cut(s) 810, 1232, 1703, 2634
BstNSI RCATGY 5 cut(s) 430, 829, 1725, 2188, 2844
BstPAI GACNNNNGTC 1 cut(s) 2934
BstSCI CCNGG 4 cut(s) 808, 1230, 1701, 2632
BstSFI CTRYAG 5 cut(s) 1122, 1433, 1655, 1785, 1869
BstV1I GCAGC 4 cut(s) 249, 910, 1074, 2464
BstV2I GAAGAC 2 cut(s) 2229, 2575
BstX2I RGATCY 4 cut(s) 1074, 1329, 2118, 2656
BstYI RGATCY 4 cut(s) 1074, 1329, 2118, 2656
BstZ17I GTATAC 1 cut(s) 1981
Bsu36I CCTNAGG 1 cut(s) 329
BsuRI GGCC 4 cut(s) 675, 999, 2627, 2947
BtgI CCRYGG 1 cut(s) 2418
BtsCI GGATG 4 cut(s) 585, 1405, 1802, 2527
BtsI GCAGTG 1 cut(s) 1821
BtsIMutI CAGTG 4 cut(s) 1583, 1821, 2084, 2326
BveI ACCTGC 3 cut(s) 100, 1426, 2701
Cac8I GCNNGC 2 cut(s) 1723, 2842
CciI TCATGA 1 cut(s) 2299
Cfr10I RCCGGY 1 cut(s) 506
Cfr13I GGNCC 3 cut(s) 581, 707, 2884
CsiI ACCWGGT 1 cut(s) 808
Csp6I GTAC 3 cut(s) 1367, 1736, 2182
CspCI CAANNNNNGTGG 2 cut(s) 579, 614
CviQI GTAC 3 cut(s) 1367, 1736, 2182
DraI TTTAAA 2 cut(s) 1305, 2590
EaeI YGGCCR 1 cut(s) 2625
Eam1104I CTCTTC 4 cut(s) 1809, 2632, 2670, 2676
EarI CTCTTC 4 cut(s) 1809, 2632, 2670, 2676
EciI GGCGGA 1 cut(s) 1947
Eco130I CCWWGG 3 cut(s) 597, 1159, 2858
Eco47I GGWCC 3 cut(s) 581, 707, 2884
Eco57I CTGAAG 2 cut(s) 504, 1589
Eco81I CCTNAGG 1 cut(s) 329
EcoNI CCTNNNNNAGG 3 cut(s) 328, 813, 1895
EcoO109I RGGNCCY 1 cut(s) 581
EcoRI GAATTC 3 cut(s) 441, 863, 1617
EcoRII CCWGG 4 cut(s) 808, 1230, 1701, 2632
EcoT14I CCWWGG 3 cut(s) 597, 1159, 2858
EcoT22I ATGCAT 1 cut(s) 112
ErhI CCWWGG 3 cut(s) 597, 1159, 2858
FaqI GGGAC 2 cut(s) 594, 693
FauNDI CATATG 1 cut(s) 12
FbaI TGATCA 2 cut(s) 1818, 1996
FblI GTMKAC 1 cut(s) 1980
Fnu4HI GCNGC 5 cut(s) 238, 924, 986, 1063, 2478
FokI GGATG 4 cut(s) 572, 1392, 1809, 2534
Fsp4HI GCNGC 5 cut(s) 238, 924, 986, 1063, 2478
FspBI CTAG 3 cut(s) 975, 1010, 2171
GluI GCNGC 5 cut(s) 238, 924, 986, 1063, 2478
GsaI CCCAGC 1 cut(s) 884
GsuI CTGGAG 5 cut(s) 965, 1091, 1632, 2119, 2466
HaeIII GGCC 4 cut(s) 675, 999, 2627, 2947
HapII CCGG 1 cut(s) 507
HincII GTYRAC 2 cut(s) 451, 2929
HindII GTYRAC 2 cut(s) 451, 2929
HindIII AAGCTT 3 cut(s) 542, 685, 1460
HinfI GANTC 9 cut(s) 200, 294, 1147, 1186, 1935, 2403, 2423, 2852, 2863
HpaII CCGG 1 cut(s) 507
HphI GGTGA 7 cut(s) 67, 294, 1345, 1450, 1721, 2396, 2847
HpyCH4III ACNGT 5 cut(s) 356, 1709, 1863, 2330, 2449
HpyCH4IV ACGT 2 cut(s) 765, 1236
HpyF10VI GCNNNNNNNGC 5 cut(s) 13, 101, 507, 1531, 1971
HpySE526I ACGT 2 cut(s) 765, 1236
KflI GGGWCCC 1 cut(s) 581
Ksp22I TGATCA 2 cut(s) 1818, 1996
LmnI GCTCC 4 cut(s) 4, 2051, 2138, 2485
Lsp1109I GCAGC 4 cut(s) 249, 910, 1074, 2464
LweI GCATC 8 cut(s) 256, 486, 559, 903, 910, 1787, 2634, 2902
MabI ACCWGGT 1 cut(s) 808
MaeI CTAG 3 cut(s) 975, 1010, 2171
MaeII ACGT 2 cut(s) 765, 1236
MaeIII GTNAC 6 cut(s) 616, 775, 1278, 1418, 2330, 2729
MfeI CAATTG 3 cut(s) 702, 1358, 2466
MflI RGATCY 4 cut(s) 1074, 1329, 2118, 2656
MlsI TGGCCA 1 cut(s) 2627
MluNI TGGCCA 1 cut(s) 2627
MlyI GAGTC 4 cut(s) 194, 1141, 2397, 2417
MmeI TCCRAC 6 cut(s) 112, 411, 421, 862, 2529, 2684
Mox20I TGGCCA 1 cut(s) 2627
Mph1103I ATGCAT 1 cut(s) 112
MroXI GAANNNNTTC 2 cut(s) 607, 1018
MscI TGGCCA 1 cut(s) 2627
MslI CAYNNNNRTG 3 cut(s) 2382, 2411, 2798
Msp20I TGGCCA 1 cut(s) 2627
MspA1I CMGCKG 2 cut(s) 625, 985
MspI CCGG 1 cut(s) 507
MspR9I CCNGG 4 cut(s) 810, 1232, 1703, 2634
MunI CAATTG 3 cut(s) 702, 1358, 2466
Mva1269I GAATGC 2 cut(s) 1401, 2081
MvaI CCWGG 4 cut(s) 810, 1232, 1703, 2634
MwoI GCNNNNNNNGC 5 cut(s) 13, 101, 507, 1531, 1971
NdeI CATATG 1 cut(s) 12
NlaIV GGNNCC 5 cut(s) 582, 583, 709, 1331, 2108
NmeAIII GCCGAG 1 cut(s) 2367
NmuCI GTSAC 2 cut(s) 616, 2330
NsiI ATGCAT 1 cut(s) 112
NspI RCATGY 5 cut(s) 430, 829, 1725, 2188, 2844
NspV TTCGAA 1 cut(s) 346
OliI CACNNNNGTG 1 cut(s) 2798
PaeI GCATGC 2 cut(s) 1725, 2844
PagI TCATGA 1 cut(s) 2299
PaqCI CACCTGC 2 cut(s) 1426, 2701
PciI ACATGT 2 cut(s) 426, 2184
PctI GAATGC 2 cut(s) 1401, 2081
PdmI GAANNNNTTC 2 cut(s) 607, 1018
PfeI GAWTC 5 cut(s) 294, 1186, 1935, 2852, 2863
PflMI CCANNNNNTGG 2 cut(s) 311, 1415
PkrI GCNGC 5 cut(s) 239, 925, 987, 1064, 2479
PleI GAGTC 4 cut(s) 194, 1141, 2397, 2417
PpsI GAGTC 4 cut(s) 194, 1141, 2397, 2417
PpuMI RGGWCCY 1 cut(s) 581
PscI ACATGT 2 cut(s) 426, 2184
PshAI GACNNNNGTC 1 cut(s) 2934
PsiI TTATAA 2 cut(s) 1043, 1092
Psp1406I AACGTT 1 cut(s) 765
Psp5II RGGWCCY 1 cut(s) 581
Psp6I CCWGG 4 cut(s) 808, 1230, 1701, 2632
PspFI CCCAGC 1 cut(s) 880
PspGI CCWGG 4 cut(s) 808, 1230, 1701, 2632
PspN4I GGNNCC 5 cut(s) 582, 583, 709, 1331, 2108
PspPI GGNCC 3 cut(s) 581, 707, 2884
PspPPI RGGWCCY 1 cut(s) 581
PstI CTGCAG 1 cut(s) 1437
PsuI RGATCY 4 cut(s) 1074, 1329, 2118, 2656
PvuII CAGCTG 1 cut(s) 625
RsaI GTAC 3 cut(s) 1368, 1737, 2183
RsaNI GTAC 3 cut(s) 1367, 1736, 2182
RseI CAYNNNNRTG 3 cut(s) 2382, 2411, 2798
SatI GCNGC 5 cut(s) 238, 924, 986, 1063, 2478
Sau96I GGNCC 3 cut(s) 581, 707, 2884
SchI GAGTC 4 cut(s) 194, 1141, 2397, 2417
ScrFI CCNGG 4 cut(s) 810, 1232, 1703, 2634
SexAI ACCWGGT 1 cut(s) 808
SfaNI GCATC 8 cut(s) 256, 486, 559, 903, 910, 1787, 2634, 2902
SfcI CTRYAG 5 cut(s) 1122, 1433, 1655, 1785, 1869
SfuI TTCGAA 1 cut(s) 346
SinI GGWCC 3 cut(s) 581, 707, 2884
SmiI ATTTAAAT 1 cut(s) 1305
SmiMI CAYNNNNRTG 3 cut(s) 2382, 2411, 2798
SmlI CTYRAG 1 cut(s) 1225
SmoI CTYRAG 1 cut(s) 1225
SphI GCATGC 2 cut(s) 1725, 2844
SsiI CCGC 6 cut(s) 374, 467, 499, 985, 1932, 1965
SspI AATATT 2 cut(s) 1414, 2263
SspMI CTAG 3 cut(s) 975, 1010, 2171
StyD4I CCNGG 4 cut(s) 808, 1230, 1701, 2632
StyI CCWWGG 3 cut(s) 597, 1159, 2858
SwaI ATTTAAAT 1 cut(s) 1305
TaaI ACNGT 5 cut(s) 356, 1709, 1863, 2330, 2449
TaiI ACGT 2 cut(s) 768, 1239
TaqI TCGA 2 cut(s) 346, 2866
TatI WGTACW 2 cut(s) 1366, 2181
TauI GCSGC 1 cut(s) 988
TfiI GAWTC 5 cut(s) 294, 1186, 1935, 2852, 2863
TscAI CASTG 4 cut(s) 1590, 1821, 2091, 2333
TseFI GTSAC 2 cut(s) 616, 2330
TseI GCWGC 4 cut(s) 237, 923, 1062, 2477
Tsp45I GTSAC 2 cut(s) 616, 2330
TspGWI ACGGA 4 cut(s) 193, 578, 1342, 2435
TspRI CASTG 4 cut(s) 1590, 1821, 2091, 2333
Van91I CCANNNNNTGG 2 cut(s) 311, 1415
VpaK11BI GGWCC 3 cut(s) 581, 707, 2884
XagI CCTNNNNNAGG 3 cut(s) 328, 813, 1895
XapI RAATTY 9 cut(s) 146, 441, 513, 863, 967, 1306, 1617, 1886, 2776
XceI RCATGY 5 cut(s) 430, 829, 1725, 2188, 2844
XcmI CCANNNNNNNNNTGG 1 cut(s) 2065
XmiI GTMKAC 1 cut(s) 1980
XmnI GAANNNNTTC 2 cut(s) 607, 1018
XspI CTAG 3 cut(s) 975, 1010, 2171
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.