Rorug01G0356800
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
47289605 .. 47297791
8187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0356800.1

Sequence Viewer

Length: 2115 bp
ATGGAGATAACCTACGCATCCCCAAGCAACTCCGATTTCGCGGGCGGATCCTCCTCCATGCCGACGACGACCCGACCCGTCCGGATTATCCCCTTGCAGCACCCGGAAACGACGTCGGTGTCGTCGTCGTCCTCCTCAAATGCGTCGCCGCTGTGGGCCGCGCTGTCGAGGTGGAAATCGAAGGTCGTCAGAATGACGTGGATTGAGTGGCTGGAGCTGTTCCTGCCTTGCTTCCGGTGGATTCGGACCTACAAATGGCGCGAGTATCTCCAGGTCGATCTCATGGCCGGAATGACCGTCGGCGTCATGCTCGTTCCTCAGGCAATGTCTTATGCAAAATTGGCTGGGCTTGAACCCATATATGGACTTTACTCTGGATTTGTACCTTTATTTGTGTATGCTATATTTGGCTCGTCTCGTCAGCTAGCTGTTGGTCCAGTAGCGTTGGTTTCACTCCTAGTCTCCAATGTTTTAAGTGGCATCGTTGATTCTTCTGATGCGTTATACACTGAGCTGGCAATATTATTGGCACTCATGGTTGGGATCATGGAATGCATTTTGGGGCTTTTAAGGCTTGGATGGATTATTCGCTTCATCAGCCACTCAGTCATTTCTGGTTTTACGACTGCTTCAGCCATTGTGATTGCTTTATCTCAAGCAAAATACTTCTTGGGATATGATGTAGAACGAAGTAGCGAGATTGTGCCACTGATTGAGAGCATTATATCTGGAGCTGATGCGTTTTCATGGCCCCCTTTCGTAATGGGATCCGTCATTCTTGCGATACTATTGACCATGAAACACTTGGGAAAGACAAAGAAACACTTGCGTTTCCTGAGAGCAGCAGGTCCCCTCACTGCAGTCCTTTTGGGCACTATTTTTGTAAAAATATTTAATCCATCTTCCATATCCTTGGTAGGAGACATACCGCAGGGCCTTCCATCATTTTCCATCCCTAAAGCTTTTGGATATGCTACATCTTTGATTCCGACTGCGCTTCTCATTACTGGTGTAGCTATTTTGGAATCTGTGGGCATTGCAAAAGCATTAGCAGCAAAGAATGGCTATGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGGGTGGCAAATATTTTTGGTTCATTTTTTTCTGCATACCCTACAACAGGTTCCTTTTCTAGGTCAGCTGTGAATAATGAAAGTGGAGCAAAAACTGGCTTATCTGGAATTGTTATGGGATTTATAATGGGGTGTGCCCTACTATTTATGACTACACTGTTTGAATCCATACCCCAGTGTGCTCTAGCTGCCATTGTCATTTCTGCTGTAATAGGCCTGGTGGATTATGAGGAGGCTATATTTTTATGGCGAGTGGATAAGAAAGATTTTCTTCTTTGGACCATCACAAGCAGTACAACTTTGTTCCTTGGCATTGAGATTGGCGTCCTTGTCGGGGTTGGTGTTTCACTTGCATTTGTTATATATGAATCAGCAAACCCCCATATTGCTGTCTTGGGGCGTCTCCCAGGTACCACTGTTTACAGAAATACACAACAATATCCAGAAGCATATACATACAATGGAATTGTGATTGTTCGGATTGATGCACCTATTTACTTTGCTAACATTAGTTACATAAAAGACAGGCTACGTGAATATGAAGTGGAGGTTGATAAATCTACTAGCCGTGGACCAGAAGTTGAAAGAATTTATTTTGTGATCATAGAGATGGCACCTGTAACATATATAGATTCAAGTGGTGTCCAAGCTTTAAGAGAGTTGCATCAGGAGTACAAGTTGCGGGACATCCAGATTGCCATTTCAAATCTCAATCGAGAAACTCTGATGACCTTATCAAGATCAGGCGTAGTAGAGCTGATTGGTAAGGAGTGGTTCTTCGTAAGAGTGCACGATGCTGTTCAAGTTTGCCTTCAGCATGTTCAGAGCTTAAAAGAGACACCTAAGATGGCCGACCCTCTGACTGAAGAGAGGCAGAGTTCCTTCCAGAGATTTCTTAGACAAAGAGAGGAGGATTCATCACTATCCGAGCTGGAGTCTGGGAACCAGACATCTTTAGTTACCAAGGAAAGCGACCCTCAGTTGGAGCCTCTATTGTCTCGAAAATTTTCTTGA

Protein Analysis

704

Amino Acids

77.38

Weight (kDa)

6.02

Isoelectric Point (pI)

42.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfate_transp PF00916 90 - 463 6.7e-128 Sulfate permease family
STAS PF01740 514 - 633 3.4e-24 STAS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1226
AasI GACNNNNNNGTC 1 cut(s) 118
AatII GACGTC 1 cut(s) 116
Acc36I ACCTGC 1 cut(s) 836
Acc65I GGTACC 1 cut(s) 1511
AccB1I GGYRCC 2 cut(s) 1511, 1714
AccII CGCG 3 cut(s) 41, 161, 261
AccIII TCCGGA 1 cut(s) 81
AciI CCGC 6 cut(s) 41, 45, 149, 159, 929, 1783
AclWI GGATC 5 cut(s) 42, 55, 551, 762, 775
AcoI YGGCCR 2 cut(s) 285, 1950
AcsI RAATTY 2 cut(s) 1689, 2105
AcuI CTGAAG 3 cut(s) 615, 1898, 1986
AcyI GRCGYC 4 cut(s) 113, 303, 1425, 1501
AfaI GTAC 4 cut(s) 384, 1396, 1513, 1775
AfiI CCNNNNNNNGG 6 cut(s) 255, 362, 1148, 1161, 1435, 2083
AgsI TTSAA 7 cut(s) 353, 1080, 1265, 1685, 1737, 1806, 1904
AjiI CACGTC 1 cut(s) 198
AjnI CCWGG 3 cut(s) 270, 1317, 1507
Alw21I GWGCWC 2 cut(s) 1285, 1893
Alw26I GTCTC 6 cut(s) 420, 466, 915, 1508, 1931, 2103
Alw44I GTGCAC 1 cut(s) 1889
AlwI GGATC 5 cut(s) 42, 55, 551, 762, 775
Aor13HI TCCGGA 1 cut(s) 81
AoxI GGCC 6 cut(s) 156, 285, 749, 934, 1315, 1950
ApaLI GTGCAC 1 cut(s) 1889
ApeKI GCWGC 4 cut(s) 97, 842, 1052, 1289
ApoI RAATTY 2 cut(s) 1689, 2105
Asp700I GAANNNNTTC 1 cut(s) 2107
Asp718I GGTACC 1 cut(s) 1511
AspLEI GCGC 3 cut(s) 163, 261, 997
AspS9I GGNCC 8 cut(s) 156, 246, 434, 750, 848, 934, 1380, 1673
AsuC2I CCSGG 1 cut(s) 104
AsuNHI GCTAGC 1 cut(s) 424
AvaII GGWCC 5 cut(s) 246, 434, 848, 1380, 1673
AxyI CCTNAGG 1 cut(s) 318
BaeGI GKGCMC 3 cut(s) 875, 1240, 1893
BaeI ACNNNNGTAYC 2 cut(s) 1503, 1536
BamHI GGATCC 2 cut(s) 47, 767
BanI GGYRCC 2 cut(s) 1511, 1714
Bbv12I GWGCWC 2 cut(s) 1285, 1893
BbvI GCAGC 4 cut(s) 109, 854, 1064, 1276
BccI CCATC 7 cut(s) 573, 907, 949, 959, 1391, 1705, 1942
BceAI ACGGC 1 cut(s) 1653
BciT130I CCWGG 3 cut(s) 272, 1319, 1509
BclI TGATCA 1 cut(s) 1701
BcnI CCSGG 1 cut(s) 104
BcoDI GTCTC 6 cut(s) 420, 466, 915, 1508, 1931, 2103
BfaI CTAG 5 cut(s) 425, 458, 1161, 1286, 1665
BfmI CTRYAG 1 cut(s) 858
BfuAI ACCTGC 1 cut(s) 836
BisI GCNGC 6 cut(s) 98, 149, 159, 843, 1053, 1290
BlsI GCNGC 6 cut(s) 99, 150, 160, 844, 1054, 1291
Bme1390I CCNGG 4 cut(s) 104, 272, 1319, 1509
Bme18I GGWCC 5 cut(s) 246, 434, 848, 1380, 1673
BmgBI CACGTC 1 cut(s) 198
BmgT120I GGNCC 8 cut(s) 156, 246, 434, 750, 848, 934, 1380, 1673
BmiI GGNNCC 9 cut(s) 49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
BmrFI CCNGG 4 cut(s) 104, 272, 1319, 1509
BmrI ACTGGG 1 cut(s) 1270
BmsI GCATC 7 cut(s) 26, 487, 489, 727, 1576, 1774, 1885
BmtI GCTAGC 1 cut(s) 428
BmuI ACTGGG 1 cut(s) 1270
BpmI CTGGAG 4 cut(s) 233, 254, 750, 2054
BpuEI CTTGAG 1 cut(s) 639
BpuMI CCSGG 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 1634
BsaBI GATNNNNATC 1 cut(s) 1080
BsaHI GRCGYC 4 cut(s) 113, 303, 1425, 1501
BsaJI CCNNGG 5 cut(s) 912, 1408, 1507, 1669, 2064
BsaWI WCCGGW 2 cut(s) 81, 234
BsaXI ACNNNNNCTCC 2 cut(s) 1763, 1793
Bsc4I CCNNNNNNNGG 6 cut(s) 255, 362, 1148, 1161, 1435, 2083
Bse1I ACTGG 4 cut(s) 437, 1012, 1201, 1276
Bse21I CCTNAGG 1 cut(s) 318
Bse3DI GCAATG 2 cut(s) 330, 1035
Bse8I GATNNNNATC 1 cut(s) 1080
BseAI TCCGGA 1 cut(s) 81
BseBI CCWGG 3 cut(s) 272, 1319, 1509
BseDI CCNNGG 5 cut(s) 912, 1408, 1507, 1669, 2064
BseGI GGATG 4 cut(s) 17, 584, 951, 1788
BseJI GATNNNNATC 1 cut(s) 1080
BseLI CCNNNNNNNGG 6 cut(s) 255, 362, 1148, 1161, 1435, 2083
BseMI GCAATG 2 cut(s) 330, 1035
BseMII CTCAG 5 cut(s) 332, 501, 618, 827, 2093
BseNI ACTGG 4 cut(s) 437, 1012, 1201, 1276
BseRI GAGGAG 4 cut(s) 43, 124, 1346, 2024
BseSI GKGCMC 3 cut(s) 875, 1240, 1893
BseXI GCAGC 4 cut(s) 109, 854, 1064, 1276
BseYI CCCAGC 1 cut(s) 344
Bsh1236I CGCG 3 cut(s) 41, 161, 261
BshFI GGCC 6 cut(s) 158, 287, 751, 936, 1317, 1952
BshNI GGYRCC 2 cut(s) 1511, 1714
BsiHKAI GWGCWC 2 cut(s) 1285, 1893
BsiSI CCGG 4 cut(s) 82, 104, 235, 288
BslFI GGGAC 2 cut(s) 834, 1799
BslI CCNNNNNNNGG 6 cut(s) 255, 362, 1148, 1161, 1435, 2083
BsmAI GTCTC 6 cut(s) 420, 466, 915, 1508, 1931, 2103
BsmBI CGTCTC 2 cut(s) 420, 1508
BsmFI GGGAC 2 cut(s) 834, 1799
BsmI GAATGC 1 cut(s) 557
BsnI GGCC 6 cut(s) 158, 287, 751, 936, 1317, 1952
Bsp1286I GDGCHC 4 cut(s) 875, 1240, 1285, 1893
Bsp13I TCCGGA 1 cut(s) 81
Bsp143I GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
BspACI CCGC 6 cut(s) 41, 45, 149, 159, 929, 1783
BspANI GGCC 6 cut(s) 158, 287, 751, 936, 1317, 1952
BspCNI CTCAG 5 cut(s) 331, 502, 617, 828, 2092
BspEI TCCGGA 1 cut(s) 81
BspFNI CGCG 3 cut(s) 41, 161, 261
BspLI GGNNCC 9 cut(s) 49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
BspMAI CTGCAG 1 cut(s) 862
BspMI ACCTGC 1 cut(s) 836
BspOI GCTAGC 1 cut(s) 428
BspPI GGATC 5 cut(s) 42, 55, 551, 762, 775
BspT107I GGYRCC 2 cut(s) 1511, 1714
BsrDI GCAATG 2 cut(s) 330, 1035
BsrI ACTGG 4 cut(s) 437, 1012, 1201, 1276
BssECI CCNNGG 5 cut(s) 912, 1408, 1507, 1669, 2064
BssMI GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
BssNI GRCGYC 4 cut(s) 113, 303, 1425, 1501
BssT1I CCWWGG 3 cut(s) 912, 1408, 2064
Bst2UI CCWGG 3 cut(s) 272, 1319, 1509
Bst4CI ACNGT 3 cut(s) 298, 1260, 1519
Bst6I CTCTTC 1 cut(s) 1962
BstACI GRCGYC 4 cut(s) 113, 303, 1425, 1501
BstBAI YACGTR 1 cut(s) 1634
BstC8I GCNNGC 3 cut(s) 43, 426, 516
BstDEI CTNAG 7 cut(s) 318, 510, 604, 836, 1944, 1997, 2079
BstDSI CCRYGG 1 cut(s) 1669
BstENI CCTNNNNNAGG 2 cut(s) 1146, 1159
BstF5I GGATG 4 cut(s) 17, 584, 951, 1788
BstFNI CGCG 3 cut(s) 41, 161, 261
BstHHI GCGC 3 cut(s) 163, 261, 997
BstKTI GATC 6 cut(s) 50, 280, 546, 770, 1704, 1844
BstMAI GTCTC 6 cut(s) 420, 466, 915, 1508, 1931, 2103
BstMBI GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
BstMWI GCNNNNNNNGC 6 cut(s) 223, 341, 571, 597, 1052, 1289
BstNI CCWGG 3 cut(s) 272, 1319, 1509
BstNSI RCATGY 1 cut(s) 1922
BstSCI CCNGG 4 cut(s) 102, 270, 1317, 1507
BstSFI CTRYAG 1 cut(s) 858
BstSLI GKGCMC 3 cut(s) 875, 1240, 1893
BstUI CGCG 3 cut(s) 41, 161, 261
BstV1I GCAGC 4 cut(s) 109, 854, 1064, 1276
BstX2I RGATCY 2 cut(s) 47, 767
BstXI CCANNNNNNTGG 1 cut(s) 913
BstYI RGATCY 2 cut(s) 47, 767
Bsu36I CCTNAGG 1 cut(s) 318
BsuRI GGCC 6 cut(s) 158, 287, 751, 936, 1317, 1952
BtgI CCRYGG 1 cut(s) 1669
BtrI CACGTC 1 cut(s) 198
BtsCI GGATG 4 cut(s) 17, 584, 951, 1788
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 6 cut(s) 507, 707, 855, 1256, 1283, 1515
BveI ACCTGC 1 cut(s) 836
Cac8I GCNNGC 3 cut(s) 43, 426, 516
CfoI GCGC 3 cut(s) 163, 261, 997
Cfr13I GGNCC 8 cut(s) 156, 246, 434, 750, 848, 934, 1380, 1673
CseI GACGC 4 cut(s) 132, 292, 1414, 1490
Csp6I GTAC 4 cut(s) 383, 1395, 1512, 1774
CviAII CATG 8 cut(s) 58, 283, 307, 535, 547, 747, 796, 1919
CviQI GTAC 4 cut(s) 383, 1395, 1512, 1774
DdeI CTNAG 7 cut(s) 318, 510, 604, 836, 1944, 1997, 2079
DpnI GATC 6 cut(s) 49, 279, 545, 769, 1703, 1843
DpnII GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
DrdI GACNNNNNNGTC 1 cut(s) 118
DseDI GACNNNNNNGTC 1 cut(s) 118
EaeI YGGCCR 2 cut(s) 285, 1950
Eam1104I CTCTTC 1 cut(s) 1962
EarI CTCTTC 1 cut(s) 1962
EciI GGCGGA 1 cut(s) 60
Eco130I CCWWGG 3 cut(s) 912, 1408, 2064
Eco147I AGGCCT 1 cut(s) 1317
Eco47I GGWCC 5 cut(s) 246, 434, 848, 1380, 1673
Eco57I CTGAAG 3 cut(s) 615, 1898, 1986
Eco81I CCTNAGG 1 cut(s) 318
EcoNI CCTNNNNNAGG 2 cut(s) 1146, 1159
EcoO109I RGGNCCY 2 cut(s) 848, 934
EcoRII CCWGG 3 cut(s) 270, 1317, 1507
EcoT14I CCWWGG 3 cut(s) 912, 1408, 2064
EcoT22I ATGCAT 1 cut(s) 557
ErhI CCWWGG 3 cut(s) 912, 1408, 2064
Esp3I CGTCTC 2 cut(s) 420, 1508
FaeI CATG 8 cut(s) 61, 286, 310, 538, 550, 750, 799, 1922
FalI AAGNNNNNCTT 6 cut(s) 809, 841, 1356, 1388, 1896, 1928
FaqI GGGAC 2 cut(s) 834, 1799
FatI CATG 8 cut(s) 57, 282, 306, 534, 546, 746, 795, 1918
FauI CCCGC 2 cut(s) 34, 1776
FbaI TGATCA 1 cut(s) 1701
Fnu4HI GCNGC 6 cut(s) 98, 149, 159, 843, 1053, 1290
FokI GGATG 4 cut(s) 4, 591, 938, 1775
Fsp4HI GCNGC 6 cut(s) 98, 149, 159, 843, 1053, 1290
FspBI CTAG 5 cut(s) 425, 458, 1161, 1286, 1665
GlaI GCGC 3 cut(s) 162, 260, 996
GluI GCNGC 6 cut(s) 98, 149, 159, 843, 1053, 1290
GsaI CCCAGC 1 cut(s) 348
GsuI CTGGAG 4 cut(s) 233, 254, 750, 2054
HaeIII GGCC 6 cut(s) 158, 287, 751, 936, 1317, 1952
HapII CCGG 4 cut(s) 82, 104, 235, 288
HgaI GACGC 4 cut(s) 132, 292, 1414, 1490
HhaI GCGC 3 cut(s) 163, 261, 997
Hin1I GRCGYC 4 cut(s) 113, 303, 1425, 1501
Hin1II CATG 8 cut(s) 61, 286, 310, 538, 550, 750, 799, 1922
Hin6I GCGC 3 cut(s) 161, 259, 995
HinP1I GCGC 3 cut(s) 161, 259, 995
HindIII AAGCTT 2 cut(s) 960, 1749
HpaII CCGG 4 cut(s) 82, 104, 235, 288
Hpy166II GTNNAC 3 cut(s) 1522, 1673, 1891
Hpy8I GTNNAC 3 cut(s) 1522, 1673, 1891
Hpy99I CGWCG 8 cut(s) 67, 70, 115, 118, 127, 130, 148, 302
HpyAV CCTTC 4 cut(s) 175, 947, 1922, 1993
HpyCH4III ACNGT 3 cut(s) 298, 1260, 1519
HpyCH4IV ACGT 3 cut(s) 113, 197, 1633
HpyF10VI GCNNNNNNNGC 6 cut(s) 223, 341, 571, 597, 1052, 1289
HpyF3I CTNAG 7 cut(s) 318, 510, 604, 836, 1944, 1997, 2079
HpySE526I ACGT 3 cut(s) 113, 197, 1633
Hsp92I GRCGYC 4 cut(s) 113, 303, 1425, 1501
Hsp92II CATG 8 cut(s) 61, 286, 310, 538, 550, 750, 799, 1922
HspAI GCGC 3 cut(s) 161, 259, 995
Kpn2I TCCGGA 1 cut(s) 81
KpnI GGTACC 1 cut(s) 1515
Ksp22I TGATCA 1 cut(s) 1701
Kzo9I GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
LmnI GCTCC 4 cut(s) 214, 731, 1187, 2086
Lsp1109I GCAGC 4 cut(s) 109, 854, 1064, 1276
LweI GCATC 7 cut(s) 26, 487, 489, 727, 1576, 1774, 1885
MaeI CTAG 5 cut(s) 425, 458, 1161, 1286, 1665
MaeII ACGT 3 cut(s) 113, 197, 1633
MaeIII GTNAC 3 cut(s) 1613, 1720, 2059
MalI GATC 6 cut(s) 49, 279, 545, 769, 1703, 1843
MboI GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
MboII GAAGA 5 cut(s) 483, 894, 1364, 1870, 1979
MflI RGATCY 2 cut(s) 47, 767
MhlI GDGCHC 4 cut(s) 875, 1240, 1285, 1893
MluCI AATT 5 cut(s) 338, 1209, 1566, 1689, 2105
MlyI GAGTC 1 cut(s) 2045
MmeI TCCRAC 3 cut(s) 1013, 1053, 2064
Mph1103I ATGCAT 1 cut(s) 557
MroI TCCGGA 1 cut(s) 81
MroXI GAANNNNTTC 1 cut(s) 2107
MseI TTAA 5 cut(s) 473, 569, 894, 1754, 1931
MslI CAYNNNNRTG 1 cut(s) 1709
MspA1I CMGCKG 2 cut(s) 151, 1169
MspI CCGG 4 cut(s) 82, 104, 235, 288
MspR9I CCNGG 4 cut(s) 104, 272, 1319, 1509
Mva1269I GAATGC 1 cut(s) 557
MvaI CCWGG 3 cut(s) 272, 1319, 1509
MvnI CGCG 3 cut(s) 41, 161, 261
MwoI GCNNNNNNNGC 6 cut(s) 223, 341, 571, 597, 1052, 1289
NciI CCSGG 1 cut(s) 104
NdeII GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
NheI GCTAGC 1 cut(s) 424
NlaIII CATG 8 cut(s) 61, 286, 310, 538, 550, 750, 799, 1922
NlaIV GGNNCC 9 cut(s) 49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
NsiI ATGCAT 1 cut(s) 557
NspI RCATGY 1 cut(s) 1922
PceI AGGCCT 1 cut(s) 1317
PcsI WCGNNNNNNNCGW 2 cut(s) 119, 122
PctI GAATGC 1 cut(s) 557
PdmI GAANNNNTTC 1 cut(s) 2107
PfeI GAWTC 9 cut(s) 241, 488, 985, 1025, 1076, 1265, 1469, 1733, 2015
PkrI GCNGC 6 cut(s) 99, 150, 160, 844, 1054, 1291
PleI GAGTC 1 cut(s) 2044
PpsI GAGTC 1 cut(s) 2044
Ppu21I YACGTR 1 cut(s) 1634
PpuMI RGGWCCY 1 cut(s) 848
PsiI TTATAA 1 cut(s) 1226
Psp5II RGGWCCY 1 cut(s) 848
Psp6I CCWGG 3 cut(s) 270, 1317, 1507
PspFI CCCAGC 1 cut(s) 344
PspGI CCWGG 3 cut(s) 270, 1317, 1507
PspN4I GGNNCC 9 cut(s) 49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
PspPI GGNCC 8 cut(s) 156, 246, 434, 750, 848, 934, 1380, 1673
PspPPI RGGWCCY 1 cut(s) 848
PstI CTGCAG 1 cut(s) 862
PsuI RGATCY 2 cut(s) 47, 767
PvuII CAGCTG 1 cut(s) 1169
RsaI GTAC 4 cut(s) 384, 1396, 1513, 1775
RsaNI GTAC 4 cut(s) 383, 1395, 1512, 1774
RseI CAYNNNNRTG 1 cut(s) 1709
SaqAI TTAA 5 cut(s) 473, 569, 894, 1754, 1931
SatI GCNGC 6 cut(s) 98, 149, 159, 843, 1053, 1290
Sau3AI GATC 6 cut(s) 47, 277, 543, 767, 1701, 1841
Sau96I GGNCC 8 cut(s) 156, 246, 434, 750, 848, 934, 1380, 1673
SchI GAGTC 1 cut(s) 2045
ScrFI CCNGG 4 cut(s) 104, 272, 1319, 1509
SduI GDGCHC 4 cut(s) 875, 1240, 1285, 1893
SfaNI GCATC 7 cut(s) 26, 487, 489, 727, 1576, 1774, 1885
SfcI CTRYAG 1 cut(s) 858
SinI GGWCC 5 cut(s) 246, 434, 848, 1380, 1673
SmiMI CAYNNNNRTG 1 cut(s) 1709
SmlI CTYRAG 1 cut(s) 654
SmoI CTYRAG 1 cut(s) 654
Sse9I AATT 5 cut(s) 338, 1209, 1566, 1689, 2105
SseBI AGGCCT 1 cut(s) 1317
SsiI CCGC 6 cut(s) 41, 45, 149, 159, 929, 1783
SspI AATATT 3 cut(s) 522, 891, 1114
SspMI CTAG 5 cut(s) 425, 458, 1161, 1286, 1665
StuI AGGCCT 1 cut(s) 1317
StyD4I CCNGG 4 cut(s) 102, 270, 1317, 1507
StyI CCWWGG 3 cut(s) 912, 1408, 2064
TaaI ACNGT 3 cut(s) 298, 1260, 1519
TaiI ACGT 3 cut(s) 116, 200, 1636
TaqI TCGA 5 cut(s) 167, 179, 276, 1816, 2101
TaqII GACCGA 1 cut(s) 1085
TasI AATT 5 cut(s) 338, 1209, 1566, 1689, 2105
TatI WGTACW 2 cut(s) 1394, 1773
TauI GCSGC 2 cut(s) 151, 161
TfiI GAWTC 9 cut(s) 241, 488, 985, 1025, 1076, 1265, 1469, 1733, 2015
Tru1I TTAA 5 cut(s) 473, 569, 894, 1754, 1931
Tru9I TTAA 5 cut(s) 473, 569, 894, 1754, 1931
TscAI CASTG 6 cut(s) 514, 714, 862, 1263, 1283, 1522
TseI GCWGC 4 cut(s) 97, 842, 1052, 1289
TspDTI ATGAA 8 cut(s) 583, 735, 812, 1113, 1194, 1482, 1656, 2007
TspGWI ACGGA 1 cut(s) 760
TspRI CASTG 6 cut(s) 514, 714, 862, 1263, 1283, 1522
VneI GTGCAC 1 cut(s) 1889
VpaK11BI GGWCC 5 cut(s) 246, 434, 848, 1380, 1673
XagI CCTNNNNNAGG 2 cut(s) 1146, 1159
XapI RAATTY 2 cut(s) 1689, 2105
XceI RCATGY 1 cut(s) 1922
XcmI CCANNNNNNNNNTGG 1 cut(s) 802
XmnI GAANNNNTTC 1 cut(s) 2107
XspI CTAG 5 cut(s) 425, 458, 1161, 1286, 1665
ZraI GACGTC 1 cut(s) 114
Zsp2I ATGCAT 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.