pycom15g37100

Protein BYPASS1-related

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0011567
Physical Location & Seq
Forward (+)
37022179 .. 37023375
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1197 bp
ATGCCTTCTACGAACAATTTGGGTTCTTCTTCGCCATTGACTTCGTTTGGTCGCTCAATTTGGAGCCGGCGAGAGCCATTTCAATCAACAGAAGCTAATCAGGAGTCTAGTGAGCAGGAATTAGAGGTTCAATCTTTTCAAAAACTTGTGACAGACCTGTTTCATGACTTGTCAGCTGTTGGTGCTGATGAATTGCTCTCCATTGCGTGGATTCGGAAACTTTTGGATGTTTTCGTTAGCTGCCAAGACGAATTCAGGGTTTTATTGTTGAAAAACAAGGTGCAGTTTTCTAAACCGCCATTGGAGCATTGGGCGGATGAATACTTAGATAGGAGCTTGAAGGCTCTTGACATTTGCAATGCTGCTCGTGATGGGATTGACAAGATTCGTGTGTGGCATAAGCATTTAGAGATTGTTCTGTGTGCCTTGGAGTCTCGCCAGAGGGCATTCAGTGAGGGCCAGTTCCGTCGAGCAAGAAAGTCTTTGGTGGATTTGGCAATTGAAATGCTTGATGAGAGAGACTCTGGGTCTGTTTTTTCTCACCGCAACTGGTCTTTTGGGCTTAACAATAACACAAGAAAGGATGCTCGCCGTCGCCAACACTCATCTGGGAGTTCAACTGGGCATTCCCGCTCTAACTCATGGAGCGTGTCGCACTCTTGGTCTGCAGCTAAGCAGCTTCAGTCAATTGCAAGCAACTTGGTAGCACCTCGTGGAAACGAGGTAATTGCAACAAATGGGCTTGCAGGCTTTGTTTTCACAATGAGTTCTGTGCTCACATTTGTTTTGTCGTCTCTTGTGGCTGCGATCCCATGTCAGGATCGAGGCATTAGCACTCATTTTTCAATCCCACCGCAGTACTCCTGGGGCATCCCATTATCCTCACTTCACGAACGGATAATAGAGGAATCTAAGAAGCGAGAGCGCCAGAACTCAAATGGGTTGCTGAGGGAGATTTGTCATGTTGAGAGATGTACACGCCACATGACAGACTTGATCGATCTGGTTCAGTTTCCATTAACGGAGGAACAGAAAGTGGAAGTCGAACAAGAACTGCAGGAGTTAGCATCGATTTGCGAAAACCTTAAGAATGGACTGGATCCGCTGGAACGCCAAATTAGGGAAGTATTCCGTAGGATTATGAATTGCAGAACGGAGGGTCTCGAACTTTTGAGCAGCGCAAACAATCTGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BPS1

Protein Analysis

399

Amino Acids

45.25

Weight (kDa)

6.34

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ROH1-like PF05633 14 - 391 5e-132 Protein ROH1-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 207
AccBSI CCGCTC 1 cut(s) 633
AciI CCGC 6 cut(s) 296, 314, 544, 631, 854, 1103
AclWI GGATC 4 cut(s) 802, 828, 1094, 1107
AcsI RAATTY 1 cut(s) 251
AcuI CTGAAG 1 cut(s) 665
AdeI CACNNNGTG 1 cut(s) 713
AfaI GTAC 2 cut(s) 860, 976
AfiI CCNNNNNNNGG 3 cut(s) 207, 817, 1120
AflII CTTAAG 1 cut(s) 1085
AgsI TTSAA 8 cut(s) 83, 131, 140, 271, 340, 503, 618, 846
AhdI GACNNNNNGTC 1 cut(s) 526
AjnI CCWGG 1 cut(s) 863
AluBI AGCT 6 cut(s) 95, 176, 240, 336, 671, 679
AluI AGCT 6 cut(s) 95, 176, 240, 336, 671, 679
Alw21I GWGCWC 1 cut(s) 777
Alw26I GTCTC 4 cut(s) 438, 513, 798, 1166
AlwI GGATC 4 cut(s) 802, 828, 1094, 1107
AoxI GGCC 1 cut(s) 457
ApeKI GCWGC 6 cut(s) 240, 362, 668, 676, 803, 1176
ApoI RAATTY 1 cut(s) 251
AspLEI GCGC 2 cut(s) 927, 1181
AspS9I GGNCC 1 cut(s) 457
AsuHPI GGTGA 1 cut(s) 533
BamHI GGATCC 1 cut(s) 1099
BauI CACGAG 2 cut(s) 366, 711
Bbv12I GWGCWC 1 cut(s) 777
BbvCI CCTCAGC 1 cut(s) 947
BbvI GCAGC 6 cut(s) 227, 349, 680, 688, 790, 1188
BccI CCATC 1 cut(s) 365
BceAI ACGGC 1 cut(s) 576
BcgI CGANNNNNNTGC 2 cut(s) 710, 744
BciT130I CCWGG 1 cut(s) 865
BcoDI GTCTC 4 cut(s) 438, 513, 798, 1166
BfaI CTAG 1 cut(s) 108
BfmI CTRYAG 2 cut(s) 666, 1055
BfoI RGCGCY 1 cut(s) 928
BfrI CTTAAG 1 cut(s) 1085
BisI GCNGC 6 cut(s) 241, 363, 669, 677, 804, 1177
BlpI GCTNAGC 1 cut(s) 672
BlsI GCNGC 6 cut(s) 242, 364, 670, 678, 805, 1178
BmcAI AGTACT 1 cut(s) 860
Bme1390I CCNGG 1 cut(s) 865
BmeRI GACNNNNNGTC 1 cut(s) 526
BmgT120I GGNCC 1 cut(s) 457
BmiI GGNNCC 2 cut(s) 65, 1101
BmrFI CCNGG 1 cut(s) 865
BmrI ACTGGG 1 cut(s) 630
BmsI GCATC 3 cut(s) 574, 879, 1076
BmuI ACTGGG 1 cut(s) 630
BplI GAGNNNNNCTC 2 cut(s) 506, 538
Bpu10I CCTNAGC 1 cut(s) 947
Bpu1102I GCTNAGC 1 cut(s) 672
Bsa29I ATCGAT 2 cut(s) 999, 1070
BsaI GGTCTC 1 cut(s) 1166
BsaJI CCNNGG 2 cut(s) 426, 864
Bsc4I CCNNNNNNNGG 3 cut(s) 207, 817, 1120
Bse118I RCCGGY 1 cut(s) 66
Bse1I ACTGG 4 cut(s) 460, 554, 625, 1101
Bse3DI GCAATG 2 cut(s) 201, 364
BseBI CCWGG 1 cut(s) 865
BseCI ATCGAT 2 cut(s) 999, 1070
BseDI CCNNGG 2 cut(s) 426, 864
BseGI GGATG 4 cut(s) 232, 322, 589, 870
BseLI CCNNNNNNNGG 3 cut(s) 207, 817, 1120
BseMI GCAATG 2 cut(s) 201, 364
BseMII CTCAG 1 cut(s) 938
BseNI ACTGG 4 cut(s) 460, 554, 625, 1101
BseXI GCAGC 6 cut(s) 227, 349, 680, 688, 790, 1188
BsgI GTGCAG 1 cut(s) 302
BshFI GGCC 1 cut(s) 459
BshVI ATCGAT 2 cut(s) 999, 1070
BsiHKAI GWGCWC 1 cut(s) 777
BsiSI CCGG 1 cut(s) 67
BslI CCNNNNNNNGG 3 cut(s) 207, 817, 1120
BsmAI GTCTC 4 cut(s) 438, 513, 798, 1166
BsmBI CGTCTC 1 cut(s) 798
BsmI GAATGC 2 cut(s) 446, 625
BsnI GGCC 1 cut(s) 459
Bso31I GGTCTC 1 cut(s) 1166
Bsp1286I GDGCHC 1 cut(s) 777
Bsp1407I TGTACA 1 cut(s) 974
Bsp143I GATC 5 cut(s) 807, 820, 996, 1000, 1099
Bsp1720I GCTNAGC 1 cut(s) 672
BspACI CCGC 6 cut(s) 296, 314, 544, 631, 854, 1103
BspANI GGCC 1 cut(s) 459
BspCNI CTCAG 1 cut(s) 939
BspDI ATCGAT 2 cut(s) 999, 1070
BspHI TCATGA 1 cut(s) 163
BspLI GGNNCC 2 cut(s) 65, 1101
BspMAI CTGCAG 2 cut(s) 670, 1059
BspPI GGATC 4 cut(s) 802, 828, 1094, 1107
BspTI CTTAAG 1 cut(s) 1085
BspTNI GGTCTC 1 cut(s) 1166
BsrBI CCGCTC 1 cut(s) 633
BsrDI GCAATG 2 cut(s) 201, 364
BsrFI RCCGGY 1 cut(s) 66
BsrGI TGTACA 1 cut(s) 974
BsrI ACTGG 4 cut(s) 460, 554, 625, 1101
BssAI RCCGGY 1 cut(s) 66
BssECI CCNNGG 2 cut(s) 426, 864
BssMI GATC 5 cut(s) 807, 820, 996, 1000, 1099
BssSI CACGAG 2 cut(s) 366, 711
BssT1I CCWWGG 1 cut(s) 426
Bst2BI CACGAG 2 cut(s) 366, 711
Bst2UI CCWGG 1 cut(s) 865
BstAFI CTTAAG 1 cut(s) 1085
BstAUI TGTACA 1 cut(s) 974
BstC8I GCNNGC 5 cut(s) 68, 589, 694, 744, 748
BstDEI CTNAG 4 cut(s) 325, 672, 912, 947
BstF5I GGATG 4 cut(s) 232, 322, 589, 870
BstH2I RGCGCY 1 cut(s) 928
BstHHI GCGC 2 cut(s) 927, 1181
BstKTI GATC 5 cut(s) 810, 823, 999, 1003, 1102
BstMAI GTCTC 4 cut(s) 438, 513, 798, 1166
BstMBI GATC 5 cut(s) 807, 820, 996, 1000, 1099
BstMWI GCNNNNNNNGC 2 cut(s) 182, 304
BstNI CCWGG 1 cut(s) 865
BstSCI CCNGG 1 cut(s) 863
BstSFI CTRYAG 2 cut(s) 666, 1055
BstV1I GCAGC 6 cut(s) 227, 349, 680, 688, 790, 1188
BstX2I RGATCY 1 cut(s) 1099
BstYI RGATCY 1 cut(s) 1099
Bsu15I ATCGAT 2 cut(s) 999, 1070
BsuRI GGCC 1 cut(s) 459
BsuTUI ATCGAT 2 cut(s) 999, 1070
BtsCI GGATG 4 cut(s) 232, 322, 589, 870
BtsIMutI CAGTG 1 cut(s) 457
Cac8I GCNNGC 5 cut(s) 68, 589, 694, 744, 748
CciI TCATGA 1 cut(s) 163
CfoI GCGC 2 cut(s) 927, 1181
Cfr10I RCCGGY 1 cut(s) 66
Cfr13I GGNCC 1 cut(s) 457
ClaI ATCGAT 2 cut(s) 999, 1070
Csp6I GTAC 2 cut(s) 859, 975
CviAII CATG 5 cut(s) 164, 642, 813, 962, 985
CviQI GTAC 2 cut(s) 859, 975
DdeI CTNAG 4 cut(s) 325, 672, 912, 947
DpnI GATC 5 cut(s) 809, 822, 998, 1002, 1101
DpnII GATC 5 cut(s) 807, 820, 996, 1000, 1099
DraIII CACNNNGTG 1 cut(s) 713
DriI GACNNNNNGTC 1 cut(s) 526
Eam1105I GACNNNNNGTC 1 cut(s) 526
EciI GGCGGA 1 cut(s) 329
Eco130I CCWWGG 1 cut(s) 426
Eco31I GGTCTC 1 cut(s) 1166
Eco57I CTGAAG 1 cut(s) 665
EcoRI GAATTC 1 cut(s) 251
EcoRII CCWGG 1 cut(s) 863
EcoT14I CCWWGG 1 cut(s) 426
ErhI CCWWGG 1 cut(s) 426
Esp3I CGTCTC 1 cut(s) 798
FaeI CATG 5 cut(s) 167, 645, 816, 965, 988
FaiI YATR 7 cut(s) 165, 399, 643, 814, 963, 986, 1142
FalI AAGNNNNNCTT 2 cut(s) 466, 498
FatI CATG 5 cut(s) 163, 641, 812, 961, 984
FauI CCCGC 1 cut(s) 638
Fnu4HI GCNGC 6 cut(s) 241, 363, 669, 677, 804, 1177
FokI GGATG 4 cut(s) 239, 329, 596, 857
Fsp4HI GCNGC 6 cut(s) 241, 363, 669, 677, 804, 1177
FspBI CTAG 1 cut(s) 108
GlaI GCGC 2 cut(s) 926, 1180
GluI GCNGC 6 cut(s) 241, 363, 669, 677, 804, 1177
HaeII RGCGCY 1 cut(s) 928
HaeIII GGCC 1 cut(s) 459
HapII CCGG 1 cut(s) 67
HhaI GCGC 2 cut(s) 927, 1181
Hin1II CATG 5 cut(s) 167, 645, 816, 965, 988
Hin6I GCGC 2 cut(s) 925, 1179
HinP1I GCGC 2 cut(s) 925, 1179
HinfI GANTC 6 cut(s) 104, 211, 385, 431, 521, 908
HpaII CCGG 1 cut(s) 67
HphI GGTGA 1 cut(s) 533
Hpy166II GTNNAC 1 cut(s) 977
Hpy188I TCNGA 1 cut(s) 216
Hpy188III TCNNGA 8 cut(s) 101, 164, 347, 368, 818, 890, 1163, 1190
Hpy8I GTNNAC 1 cut(s) 977
Hpy99I CGWCG 2 cut(s) 471, 597
HpyAV CCTTC 2 cut(s) 15, 334
HpyCH4V TGCA 8 cut(s) 283, 357, 668, 692, 731, 746, 1057, 1149
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 304
HpyF3I CTNAG 4 cut(s) 325, 672, 912, 947
Hsp92II CATG 5 cut(s) 167, 645, 816, 965, 988
HspAI GCGC 2 cut(s) 925, 1179
KroI GCCGGC 1 cut(s) 66
KroNI GCCGGC 1 cut(s) 68
Kzo9I GATC 5 cut(s) 807, 820, 996, 1000, 1099
LmnI GCTCC 4 cut(s) 63, 304, 333, 645
Lsp1109I GCAGC 6 cut(s) 227, 349, 680, 688, 790, 1188
LweI GCATC 3 cut(s) 574, 879, 1076
MaeI CTAG 1 cut(s) 108
MaeIII GTNAC 1 cut(s) 148
MalI GATC 5 cut(s) 809, 822, 998, 1002, 1101
MbiI CCGCTC 1 cut(s) 633
MboI GATC 5 cut(s) 807, 820, 996, 1000, 1099
MboII GAAGA 2 cut(s) 18, 21
MfeI CAATTG 2 cut(s) 498, 687
MflI RGATCY 1 cut(s) 1099
MhlI GDGCHC 1 cut(s) 777
MlyI GAGTC 3 cut(s) 113, 440, 515
MroNI GCCGGC 1 cut(s) 66
MseI TTAA 3 cut(s) 564, 1019, 1086
MspA1I CMGCKG 2 cut(s) 176, 1105
MspCI CTTAAG 1 cut(s) 1085
MspI CCGG 1 cut(s) 67
MspR9I CCNGG 1 cut(s) 865
MunI CAATTG 2 cut(s) 498, 687
Mva1269I GAATGC 2 cut(s) 446, 625
MvaI CCWGG 1 cut(s) 865
MwoI GCNNNNNNNGC 2 cut(s) 182, 304
NaeI GCCGGC 1 cut(s) 68
NdeII GATC 5 cut(s) 807, 820, 996, 1000, 1099
NgoMIV GCCGGC 1 cut(s) 66
NlaIII CATG 5 cut(s) 167, 645, 816, 965, 988
NlaIV GGNNCC 2 cut(s) 65, 1101
NmuCI GTSAC 1 cut(s) 148
PagI TCATGA 1 cut(s) 163
PctI GAATGC 2 cut(s) 446, 625
PdiI GCCGGC 1 cut(s) 68
PfeI GAWTC 3 cut(s) 211, 385, 908
PflMI CCANNNNNTGG 1 cut(s) 207
PkrI GCNGC 6 cut(s) 242, 364, 670, 678, 805, 1178
PleI GAGTC 3 cut(s) 112, 439, 515
PpsI GAGTC 3 cut(s) 112, 439, 515
Psp6I CCWGG 1 cut(s) 863
PspGI CCWGG 1 cut(s) 863
PspN4I GGNNCC 2 cut(s) 65, 1101
PspPI GGNCC 1 cut(s) 457
PstI CTGCAG 2 cut(s) 670, 1059
PsuI RGATCY 1 cut(s) 1099
PvuII CAGCTG 1 cut(s) 176
RsaI GTAC 2 cut(s) 860, 976
RsaNI GTAC 2 cut(s) 859, 975
SaqAI TTAA 3 cut(s) 564, 1019, 1086
SatI GCNGC 6 cut(s) 241, 363, 669, 677, 804, 1177
Sau3AI GATC 5 cut(s) 807, 820, 996, 1000, 1099
Sau96I GGNCC 1 cut(s) 457
ScaI AGTACT 1 cut(s) 860
SchI GAGTC 3 cut(s) 113, 440, 515
ScrFI CCNGG 1 cut(s) 865
SduI GDGCHC 1 cut(s) 777
SfaNI GCATC 3 cut(s) 574, 879, 1076
SfcI CTRYAG 2 cut(s) 666, 1055
SmlI CTYRAG 1 cut(s) 1085
SmoI CTYRAG 1 cut(s) 1085
SsiI CCGC 6 cut(s) 296, 314, 544, 631, 854, 1103
SspMI CTAG 1 cut(s) 108
StyD4I CCNGG 1 cut(s) 863
StyI CCWWGG 1 cut(s) 426
TaqI TCGA 6 cut(s) 469, 823, 999, 1044, 1070, 1164
TatI WGTACW 2 cut(s) 858, 974
TfiI GAWTC 3 cut(s) 211, 385, 908
Tru1I TTAA 3 cut(s) 564, 1019, 1086
Tru9I TTAA 3 cut(s) 564, 1019, 1086
TscAI CASTG 1 cut(s) 457
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 6 cut(s) 240, 362, 668, 676, 803, 1176
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 4 cut(s) 152, 204, 333, 1157
TspGWI ACGGA 5 cut(s) 455, 910, 1037, 1121, 1169
TspRI CASTG 1 cut(s) 457
Van91I CCANNNNNTGG 1 cut(s) 207
Vha464I CTTAAG 1 cut(s) 1085
XapI RAATTY 1 cut(s) 251
XcmI CCANNNNNNNNNTGG 3 cut(s) 306, 605, 935
XspI CTAG 1 cut(s) 108
ZrmI AGTACT 1 cut(s) 860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.