Protein CHUP1, chloroplastic-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25690 AT3G25690 AT3G25690 AT3G25690 AT3G25690 AT3G25690 |
| fragaria_vesca | FvH4_4g28201 |
| malus_domestica | MD13G1047800.v1.1 |
| prunus_persica | Prupe.1G304200_v2.0.a1 Prupe.1G304200_v2.0.a1 |
| pyrus_communis | pycom13g04200 pycom16g04300 |
| rosa_chinensis | RchiOBHm_Chr4g0435971 |
| rosa_laevigata | RLG00000006544 |
| rosa_multiflora | Rmu_sc0018865.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00377140 |
| rosa_rugosa | Rorug04G0291000 |
| rosa_samantha | Rh4BG354200 Rh4CG368700 |
| rosa_wichuraiana | Rw4G030190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2124 |
| Acc65I | GGTACC | 2 cut(s) | 2002, 2033 |
| AccB1I | GGYRCC | 2 cut(s) | 2002, 2033 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1197, 2111, 2114 |
| AccIII | TCCGGA | 2 cut(s) | 1128, 1564 |
| AciI | CCGC | 4 cut(s) | 797, 2012, 2132, 2138 |
| AclWI | GGATC | 5 cut(s) | 1243, 1556, 1569, 1940, 2591 |
| AcoI | YGGCCR | 1 cut(s) | 1536 |
| AcsI | RAATTY | 4 cut(s) | 323, 1810, 2204, 2721 |
| AcuI | CTGAAG | 5 cut(s) | 954, 1037, 2409, 2529, 2645 |
| AdeI | CACNNNGTG | 4 cut(s) | 293, 2090, 2114, 2363 |
| AflII | CTTAAG | 1 cut(s) | 869 |
| AflIII | ACRYGT | 2 cut(s) | 2806, 2962 |
| AhlI | ACTAGT | 1 cut(s) | 1084 |
| AjiI | CACGTC | 1 cut(s) | 2963 |
| AjnI | CCWGG | 5 cut(s) | 289, 1294, 2086, 2110, 2140 |
| Alw21I | GWGCWC | 3 cut(s) | 1128, 2191, 2460 |
| Alw26I | GTCTC | 3 cut(s) | 962, 1358, 2584 |
| AlwI | GGATC | 5 cut(s) | 1243, 1556, 1569, 1940, 2591 |
| Ama87I | CYCGRG | 1 cut(s) | 2645 |
| Aor13HI | TCCGGA | 2 cut(s) | 1128, 1564 |
| AoxI | GGCC | 8 cut(s) | 739, 1206, 1492, 1536, 1731, 1991, 2092, 2504 |
| ApaI | GGGCCC | 1 cut(s) | 1496 |
| ApoI | RAATTY | 4 cut(s) | 323, 1810, 2204, 2721 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1050, 1064, 1686, 2942 |
| Asp718I | GGTACC | 2 cut(s) | 2002, 2033 |
| AspA2I | CCTAGG | 1 cut(s) | 1997 |
| AspS9I | GGNCC | 7 cut(s) | 1027, 1492, 1493, 2057, 2093, 2117, 2837 |
| AsuII | TTCGAA | 1 cut(s) | 2946 |
| AvaI | CYCGRG | 1 cut(s) | 2645 |
| AvaII | GGWCC | 4 cut(s) | 1027, 2057, 2117, 2837 |
| AvrII | CCTAGG | 1 cut(s) | 1997 |
| AxyI | CCTNAGG | 1 cut(s) | 2154 |
| BaeGI | GKGCMC | 1 cut(s) | 1496 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1073, 1106, 2025, 2058 |
| BalI | TGGCCA | 1 cut(s) | 1538 |
| BamHI | GGATCC | 1 cut(s) | 1561 |
| BanI | GGYRCC | 2 cut(s) | 2002, 2033 |
| BanII | GRGCYC | 4 cut(s) | 1128, 1190, 1496, 2460 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 300, 332, 480, 512 |
| BauI | CACGAG | 1 cut(s) | 1164 |
| BbsI | GAAGAC | 2 cut(s) | 156, 1043 |
| Bbv12I | GWGCWC | 3 cut(s) | 1128, 2191, 2460 |
| BccI | CCATC | 8 cut(s) | 141, 406, 923, 1294, 1523, 1547, 1552, 1925 |
| BciT130I | CCWGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| BciVI | GTATCC | 3 cut(s) | 1249, 1713, 2236 |
| BcoDI | GTCTC | 3 cut(s) | 962, 1358, 2584 |
| BcuI | ACTAGT | 1 cut(s) | 1084 |
| BfmI | CTRYAG | 1 cut(s) | 608 |
| BfrI | CTTAAG | 1 cut(s) | 869 |
| BfuI | GTATCC | 3 cut(s) | 1249, 1713, 2236 |
| BglII | AGATCT | 3 cut(s) | 331, 1439, 2422 |
| BlnI | CCTAGG | 1 cut(s) | 1997 |
| BmcAI | AGTACT | 1 cut(s) | 506 |
| Bme1390I | CCNGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| Bme18I | GGWCC | 4 cut(s) | 1027, 2057, 2117, 2837 |
| BmeT110I | CYCGRG | 1 cut(s) | 2645 |
| BmgBI | CACGTC | 1 cut(s) | 2963 |
| BmgT120I | GGNCC | 7 cut(s) | 1027, 1492, 1493, 2057, 2093, 2117, 2837 |
| BmiI | GGNNCC | 7 cut(s) | 1493, 1494, 1563, 2004, 2035, 2059, 2850 |
| BmrFI | CCNGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| BmsI | GCATC | 9 cut(s) | 712, 799, 916, 1658, 2033, 2272, 2512, 2815, 2914 |
| BpiI | GAAGAC | 2 cut(s) | 156, 1043 |
| BpmI | CTGGAG | 3 cut(s) | 1470, 2049, 2934 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2193, 2954 |
| Bpu14I | TTCGAA | 1 cut(s) | 2946 |
| BpuEI | CTTGAG | 6 cut(s) | 521, 542, 1131, 1135, 1286, 2474 |
| BsaBI | GATNNNNATC | 2 cut(s) | 353, 1260 |
| BsaJI | CCNNGG | 5 cut(s) | 1294, 1487, 1833, 1997, 2968 |
| BsaWI | WCCGGW | 3 cut(s) | 1128, 1564, 2054 |
| Bse118I | RCCGGY | 1 cut(s) | 1719 |
| Bse1I | ACTGG | 4 cut(s) | 1503, 1660, 2447, 2726 |
| Bse21I | CCTNAGG | 1 cut(s) | 2154 |
| Bse3DI | GCAATG | 2 cut(s) | 36, 954 |
| Bse8I | GATNNNNATC | 2 cut(s) | 353, 1260 |
| BseAI | TCCGGA | 2 cut(s) | 1128, 1564 |
| BseBI | CCWGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| BseDI | CCNNGG | 5 cut(s) | 1294, 1487, 1833, 1997, 2968 |
| BseGI | GGATG | 4 cut(s) | 931, 1282, 1286, 2527 |
| BseJI | GATNNNNATC | 2 cut(s) | 353, 1260 |
| BseMI | GCAATG | 2 cut(s) | 36, 954 |
| BseMII | CTCAG | 7 cut(s) | 90, 199, 399, 1175, 1369, 2184, 2832 |
| BseNI | ACTGG | 4 cut(s) | 1503, 1660, 2447, 2726 |
| BseRI | GAGGAG | 8 cut(s) | 224, 227, 230, 233, 236, 239, 629, 1010 |
| BseSI | GKGCMC | 1 cut(s) | 1496 |
| BshFI | GGCC | 8 cut(s) | 741, 1208, 1494, 1538, 1733, 1993, 2094, 2506 |
| BshNI | GGYRCC | 2 cut(s) | 2002, 2033 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1128, 2191, 2460 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2645 |
| BsiSI | CCGG | 4 cut(s) | 1129, 1565, 1720, 2055 |
| BsiWI | CGTACG | 1 cut(s) | 2881 |
| BslFI | GGGAC | 3 cut(s) | 2043, 2702, 2973 |
| BsmAI | GTCTC | 3 cut(s) | 962, 1358, 2584 |
| BsmFI | GGGAC | 3 cut(s) | 2043, 2702, 2973 |
| BsmI | GAATGC | 3 cut(s) | 103, 1111, 1525 |
| BsnI | GGCC | 8 cut(s) | 741, 1208, 1494, 1538, 1733, 1993, 2094, 2506 |
| BsoBI | CYCGRG | 1 cut(s) | 2645 |
| Bsp119I | TTCGAA | 1 cut(s) | 2946 |
| Bsp120I | GGGCCC | 1 cut(s) | 1492 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1128, 1190, 1496, 2191, 2460 |
| Bsp13I | TCCGGA | 2 cut(s) | 1128, 1564 |
| Bsp19I | CCATGG | 1 cut(s) | 2968 |
| BspACI | CCGC | 4 cut(s) | 797, 2012, 2132, 2138 |
| BspANI | GGCC | 8 cut(s) | 741, 1208, 1494, 1538, 1733, 1993, 2094, 2506 |
| BspCNI | CTCAG | 7 cut(s) | 89, 198, 400, 1176, 1368, 2185, 2833 |
| BspEI | TCCGGA | 2 cut(s) | 1128, 1564 |
| BspHI | TCATGA | 1 cut(s) | 2999 |
| BspLI | GGNNCC | 7 cut(s) | 1493, 1494, 1563, 2004, 2035, 2059, 2850 |
| BspMAI | CTGCAG | 1 cut(s) | 612 |
| BspPI | GGATC | 5 cut(s) | 1243, 1556, 1569, 1940, 2591 |
| BspQI | GCTCTTC | 3 cut(s) | 630, 2448, 2943 |
| BspT104I | TTCGAA | 1 cut(s) | 2946 |
| BspT107I | GGYRCC | 2 cut(s) | 2002, 2033 |
| BspTI | CTTAAG | 1 cut(s) | 869 |
| BsrDI | GCAATG | 2 cut(s) | 36, 954 |
| BsrFI | RCCGGY | 1 cut(s) | 1719 |
| BsrI | ACTGG | 4 cut(s) | 1503, 1660, 2447, 2726 |
| BssAI | RCCGGY | 1 cut(s) | 1719 |
| BssECI | CCNNGG | 5 cut(s) | 1294, 1487, 1833, 1997, 2968 |
| BssSI | CACGAG | 1 cut(s) | 1164 |
| BssT1I | CCWWGG | 4 cut(s) | 1487, 1833, 1997, 2968 |
| Bst2BI | CACGAG | 1 cut(s) | 1164 |
| Bst2UI | CCWGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| Bst4CI | ACNGT | 4 cut(s) | 128, 571, 750, 2186 |
| Bst6I | CTCTTC | 7 cut(s) | 201, 234, 630, 1602, 1982, 2448, 2943 |
| BstAFI | CTTAAG | 1 cut(s) | 869 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 47, 422 |
| BstBI | TTCGAA | 1 cut(s) | 2946 |
| BstC8I | GCNNGC | 8 cut(s) | 101, 584, 780, 1017, 1111, 1773, 2012, 2150 |
| BstDSI | CCRYGG | 1 cut(s) | 2968 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2139, 2153 |
| BstF5I | GGATG | 4 cut(s) | 931, 1282, 1286, 2527 |
| BstMAI | GTCTC | 3 cut(s) | 962, 1358, 2584 |
| BstNI | CCWGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| BstNSI | RCATGY | 3 cut(s) | 586, 1019, 1113 |
| BstSCI | CCNGG | 5 cut(s) | 289, 1294, 2086, 2110, 2140 |
| BstSFI | CTRYAG | 1 cut(s) | 608 |
| BstSLI | GKGCMC | 1 cut(s) | 1496 |
| BstV2I | GAAGAC | 2 cut(s) | 156, 1043 |
| BstX2I | RGATCY | 4 cut(s) | 331, 1439, 1561, 2422 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 922, 2733 |
| BstYI | RGATCY | 4 cut(s) | 331, 1439, 1561, 2422 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2154 |
| BsuI | GTATCC | 3 cut(s) | 1249, 1713, 2236 |
| BsuRI | GGCC | 8 cut(s) | 741, 1208, 1494, 1538, 1733, 1993, 2094, 2506 |
| BtgI | CCRYGG | 1 cut(s) | 2968 |
| BtrI | CACGTC | 1 cut(s) | 2963 |
| BtsCI | GGATG | 4 cut(s) | 931, 1282, 1286, 2527 |
| BtsI | GCAGTG | 2 cut(s) | 265, 2173 |
| BtsIMutI | CAGTG | 5 cut(s) | 265, 576, 1075, 1496, 2173 |
| Cac8I | GCNNGC | 8 cut(s) | 101, 584, 780, 1017, 1111, 1773, 2012, 2150 |
| CciI | TCATGA | 1 cut(s) | 2999 |
| Cfr10I | RCCGGY | 1 cut(s) | 1719 |
| Cfr13I | GGNCC | 7 cut(s) | 1027, 1492, 1493, 2057, 2093, 2117, 2837 |
| CsiI | ACCWGGT | 3 cut(s) | 289, 2086, 2110 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1023, 1058, 2572, 2607 |
| DraI | TTTAAA | 1 cut(s) | 1011 |
| DraIII | CACNNNGTG | 4 cut(s) | 293, 2090, 2114, 2363 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2124 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2124 |
| EaeI | YGGCCR | 1 cut(s) | 1536 |
| Eam1104I | CTCTTC | 7 cut(s) | 201, 234, 630, 1602, 1982, 2448, 2943 |
| EarI | CTCTTC | 7 cut(s) | 201, 234, 630, 1602, 1982, 2448, 2943 |
| EciI | GGCGGA | 1 cut(s) | 2127 |
| Ecl136II | GAGCTC | 2 cut(s) | 1126, 2458 |
| Eco130I | CCWWGG | 4 cut(s) | 1487, 1833, 1997, 2968 |
| Eco147I | AGGCCT | 1 cut(s) | 1993 |
| Eco24I | GRGCYC | 4 cut(s) | 1128, 1190, 1496, 2460 |
| Eco32I | GATATC | 1 cut(s) | 298 |
| Eco47I | GGWCC | 4 cut(s) | 1027, 2057, 2117, 2837 |
| Eco53kI | GAGCTC | 2 cut(s) | 1126, 2458 |
| Eco57I | CTGAAG | 5 cut(s) | 954, 1037, 2409, 2529, 2645 |
| Eco81I | CCTNAGG | 1 cut(s) | 2154 |
| Eco88I | CYCGRG | 1 cut(s) | 2645 |
| EcoICRI | GAGCTC | 2 cut(s) | 1126, 2458 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2139, 2153 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1027, 1492 |
| EcoRI | GAATTC | 2 cut(s) | 2204, 2721 |
| EcoRII | CCWGG | 5 cut(s) | 289, 1294, 2086, 2110, 2140 |
| EcoRV | GATATC | 1 cut(s) | 298 |
| EcoT14I | CCWWGG | 4 cut(s) | 1487, 1833, 1997, 2968 |
| EcoT22I | ATGCAT | 2 cut(s) | 1111, 2830 |
| EcoT38I | GRGCYC | 4 cut(s) | 1128, 1190, 1496, 2460 |
| ErhI | CCWWGG | 4 cut(s) | 1487, 1833, 1997, 2968 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 147, 179, 468, 500, 624, 656, 1718, 1750 |
| FaqI | GGGAC | 3 cut(s) | 2043, 2702, 2973 |
| FauI | CCCGC | 1 cut(s) | 2019 |
| FokI | GGATG | 4 cut(s) | 938, 1269, 1273, 2534 |
| FriOI | GRGCYC | 4 cut(s) | 1128, 1190, 1496, 2460 |
| GsuI | CTGGAG | 3 cut(s) | 1470, 2049, 2934 |
| HaeIII | GGCC | 8 cut(s) | 741, 1208, 1494, 1538, 1733, 1993, 2094, 2506 |
| HapII | CCGG | 4 cut(s) | 1129, 1565, 1720, 2055 |
| HincII | GTYRAC | 1 cut(s) | 370 |
| HindII | GTYRAC | 1 cut(s) | 370 |
| HindIII | AAGCTT | 2 cut(s) | 482, 626 |
| HpaI | GTTAAC | 1 cut(s) | 370 |
| HpaII | CCGG | 4 cut(s) | 1129, 1565, 1720, 2055 |
| Hpy166II | GTNNAC | 7 cut(s) | 370, 1090, 2117, 2129, 2182, 2440, 2837 |
| Hpy8I | GTNNAC | 7 cut(s) | 370, 1090, 2117, 2129, 2182, 2440, 2837 |
| HpyCH4III | ACNGT | 4 cut(s) | 128, 571, 750, 2186 |
| HpyCH4IV | ACGT | 6 cut(s) | 534, 1243, 2227, 2806, 2884, 2962 |
| HpySE526I | ACGT | 6 cut(s) | 534, 1243, 2227, 2806, 2884, 2962 |
| Kpn2I | TCCGGA | 2 cut(s) | 1128, 1564 |
| KpnI | GGTACC | 2 cut(s) | 2006, 2037 |
| KspAI | GTTAAC | 1 cut(s) | 370 |
| LguI | GCTCTTC | 3 cut(s) | 630, 2448, 2943 |
| LmnI | GCTCC | 6 cut(s) | 650, 667, 865, 1131, 2194, 2289 |
| LweI | GCATC | 9 cut(s) | 712, 799, 916, 1658, 2033, 2272, 2512, 2815, 2914 |
| MabI | ACCWGGT | 3 cut(s) | 289, 2086, 2110 |
| MaeII | ACGT | 6 cut(s) | 534, 1243, 2227, 2806, 2884, 2962 |
| MaeIII | GTNAC | 4 cut(s) | 128, 766, 1793, 1934 |
| MfeI | CAATTG | 1 cut(s) | 2783 |
| MflI | RGATCY | 4 cut(s) | 331, 1439, 1561, 2422 |
| MhlI | GDGCHC | 5 cut(s) | 1128, 1190, 1496, 2191, 2460 |
| MlsI | TGGCCA | 1 cut(s) | 1538 |
| MluNI | TGGCCA | 1 cut(s) | 1538 |
| MlyI | GAGTC | 4 cut(s) | 1348, 1571, 1625, 2586 |
| MmeI | TCCRAC | 3 cut(s) | 903, 981, 1203 |
| Mox20I | TGGCCA | 1 cut(s) | 1538 |
| Mph1103I | ATGCAT | 2 cut(s) | 1111, 2830 |
| MroI | TCCGGA | 2 cut(s) | 1128, 1564 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1050, 1064, 1686, 2942 |
| MscI | TGGCCA | 1 cut(s) | 1538 |
| MslI | CAYNNNNRTG | 2 cut(s) | 276, 1020 |
| Msp20I | TGGCCA | 1 cut(s) | 1538 |
| MspA1I | CMGCKG | 1 cut(s) | 2387 |
| MspCI | CTTAAG | 1 cut(s) | 869 |
| MspI | CCGG | 4 cut(s) | 1129, 1565, 1720, 2055 |
| MspR9I | CCNGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| MunI | CAATTG | 1 cut(s) | 2783 |
| Mva1269I | GAATGC | 3 cut(s) | 103, 1111, 1525 |
| MvaI | CCWGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| NcoI | CCATGG | 1 cut(s) | 2968 |
| NlaIV | GGNNCC | 7 cut(s) | 1493, 1494, 1563, 2004, 2035, 2059, 2850 |
| NmuCI | GTSAC | 1 cut(s) | 1793 |
| NsiI | ATGCAT | 2 cut(s) | 1111, 2830 |
| NspI | RCATGY | 3 cut(s) | 586, 1019, 1113 |
| NspV | TTCGAA | 1 cut(s) | 2946 |
| PaeI | GCATGC | 3 cut(s) | 586, 1019, 1113 |
| PaeR7I | CTCGAG | 1 cut(s) | 2645 |
| PagI | TCATGA | 1 cut(s) | 2999 |
| PceI | AGGCCT | 1 cut(s) | 1993 |
| PciSI | GCTCTTC | 3 cut(s) | 630, 2448, 2943 |
| PctI | GAATGC | 3 cut(s) | 103, 1111, 1525 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1050, 1064, 1686, 2942 |
| PfeI | GAWTC | 9 cut(s) | 527, 712, 841, 1180, 1412, 1502, 1910, 2744, 2996 |
| Pfl23II | CGTACG | 1 cut(s) | 2881 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1197, 2111, 2114 |
| PleI | GAGTC | 4 cut(s) | 1347, 1571, 1625, 2585 |
| PpsI | GAGTC | 4 cut(s) | 1347, 1571, 1625, 2585 |
| PpuMI | RGGWCCY | 1 cut(s) | 1027 |
| Psp124BI | GAGCTC | 2 cut(s) | 1128, 2460 |
| Psp5II | RGGWCCY | 1 cut(s) | 1027 |
| Psp6I | CCWGG | 5 cut(s) | 289, 1294, 2086, 2110, 2140 |
| PspGI | CCWGG | 5 cut(s) | 289, 1294, 2086, 2110, 2140 |
| PspLI | CGTACG | 1 cut(s) | 2881 |
| PspN4I | GGNNCC | 7 cut(s) | 1493, 1494, 1563, 2004, 2035, 2059, 2850 |
| PspOMI | GGGCCC | 1 cut(s) | 1492 |
| PspPI | GGNCC | 7 cut(s) | 1027, 1492, 1493, 2057, 2093, 2117, 2837 |
| PspPPI | RGGWCCY | 1 cut(s) | 1027 |
| PstI | CTGCAG | 1 cut(s) | 612 |
| PsuI | RGATCY | 4 cut(s) | 331, 1439, 1561, 2422 |
| PvuII | CAGCTG | 1 cut(s) | 2387 |
| RseI | CAYNNNNRTG | 2 cut(s) | 276, 1020 |
| SacI | GAGCTC | 2 cut(s) | 1128, 2460 |
| SapI | GCTCTTC | 3 cut(s) | 630, 2448, 2943 |
| Sau96I | GGNCC | 7 cut(s) | 1027, 1492, 1493, 2057, 2093, 2117, 2837 |
| ScaI | AGTACT | 1 cut(s) | 506 |
| SchI | GAGTC | 4 cut(s) | 1348, 1571, 1625, 2586 |
| ScrFI | CCNGG | 5 cut(s) | 291, 1296, 2088, 2112, 2142 |
| SduI | GDGCHC | 5 cut(s) | 1128, 1190, 1496, 2191, 2460 |
| SexAI | ACCWGGT | 3 cut(s) | 289, 2086, 2110 |
| SfaNI | GCATC | 9 cut(s) | 712, 799, 916, 1658, 2033, 2272, 2512, 2815, 2914 |
| SfcI | CTRYAG | 1 cut(s) | 608 |
| Sfr274I | CTCGAG | 1 cut(s) | 2645 |
| SfuI | TTCGAA | 1 cut(s) | 2946 |
| SinI | GGWCC | 4 cut(s) | 1027, 2057, 2117, 2837 |
| SlaI | CTCGAG | 1 cut(s) | 2645 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 276, 1020 |
| SmlI | CTYRAG | 8 cut(s) | 500, 557, 869, 1114, 1146, 1265, 2489, 2645 |
| SmoI | CTYRAG | 8 cut(s) | 500, 557, 869, 1114, 1146, 1265, 2489, 2645 |
| SpeI | ACTAGT | 1 cut(s) | 1084 |
| SphI | GCATGC | 3 cut(s) | 586, 1019, 1113 |
| SseBI | AGGCCT | 1 cut(s) | 1993 |
| SsiI | CCGC | 4 cut(s) | 797, 2012, 2132, 2138 |
| SspI | AATATT | 1 cut(s) | 592 |
| SstI | GAGCTC | 2 cut(s) | 1128, 2460 |
| StuI | AGGCCT | 1 cut(s) | 1993 |
| StyD4I | CCNGG | 5 cut(s) | 289, 1294, 2086, 2110, 2140 |
| StyI | CCWWGG | 4 cut(s) | 1487, 1833, 1997, 2968 |
| TaaI | ACNGT | 4 cut(s) | 128, 571, 750, 2186 |
| TaiI | ACGT | 6 cut(s) | 537, 1246, 2230, 2809, 2887, 2965 |
| TaqI | TCGA | 6 cut(s) | 897, 1342, 1483, 2395, 2646, 2946 |
| TatI | WGTACW | 3 cut(s) | 504, 2179, 2796 |
| TfiI | GAWTC | 9 cut(s) | 527, 712, 841, 1180, 1412, 1502, 1910, 2744, 2996 |
| TscAI | CASTG | 5 cut(s) | 265, 576, 1075, 1503, 2173 |
| TseFI | GTSAC | 1 cut(s) | 1793 |
| Tsp45I | GTSAC | 1 cut(s) | 1793 |
| TspGWI | ACGGA | 1 cut(s) | 980 |
| TspRI | CASTG | 5 cut(s) | 265, 576, 1075, 1503, 2173 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1197, 2111, 2114 |
| Vha464I | CTTAAG | 1 cut(s) | 869 |
| VpaK11BI | GGWCC | 4 cut(s) | 1027, 2057, 2117, 2837 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2139, 2153 |
| XapI | RAATTY | 4 cut(s) | 323, 1810, 2204, 2721 |
| XbaI | TCTAGA | 1 cut(s) | 1690 |
| XceI | RCATGY | 3 cut(s) | 586, 1019, 1113 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1928 |
| XhoI | CTCGAG | 1 cut(s) | 2645 |
| XmaJI | CCTAGG | 1 cut(s) | 1997 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1050, 1064, 1686, 2942 |
| ZrmI | AGTACT | 1 cut(s) | 506 |
| Zsp2I | ATGCAT | 2 cut(s) | 1111, 2830 |