Importin-9
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26170 |
| fragaria_vesca | FvH4_4g28521 FvH4_4g28521 |
| malus_domestica | MD16G1051700.v1.1 |
| prunus_persica | Prupe.1G300500_v2.0.a1 |
| pyrus_communis | pycom16g04540 |
| rosa_chinensis | RchiOBHm_Chr4g0436541 |
| rosa_laevigata | RLG00000006510 |
| rosa_roxburghii | Rroxscaffold_5G00377650 |
| rosa_rugosa | Rorug04G0294700 |
| rosa_samantha | Rh4AG349000 Rh4BG357600 Rh4CG372000 Rh4DG351600 |
| rosa_wichuraiana | Rw4G030530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 297, 1490 |
| AccB1I | GGYRCC | 4 cut(s) | 1340, 1942, 2171, 2329 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 137, 2066 |
| AccBSI | CCGCTC | 1 cut(s) | 2292 |
| AccI | GTMKAC | 1 cut(s) | 24 |
| AccII | CGCG | 1 cut(s) | 168 |
| AciI | CCGC | 7 cut(s) | 168, 1014, 1322, 1397, 2290, 2441, 2627 |
| AcoI | YGGCCR | 2 cut(s) | 257, 1676 |
| AcsI | RAATTY | 6 cut(s) | 7, 207, 679, 704, 1006, 1292 |
| AcuI | CTGAAG | 4 cut(s) | 314, 636, 1041, 1245 |
| AfaI | GTAC | 7 cut(s) | 165, 287, 330, 399, 715, 1018, 1470 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 137, 507, 1870, 2066, 2105, 2389 |
| AflIII | ACRYGT | 1 cut(s) | 1554 |
| AjnI | CCWGG | 4 cut(s) | 130, 1464, 1630, 2166 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1071, 1103 |
| AleI | CACNNNNGTG | 1 cut(s) | 2052 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2250, 2282 |
| Alw21I | GWGCWC | 3 cut(s) | 340, 985, 1365 |
| Alw26I | GTCTC | 4 cut(s) | 530, 1074, 1950, 2767 |
| Alw44I | GTGCAC | 1 cut(s) | 981 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2690 |
| Ama87I | CYCGRG | 1 cut(s) | 1656 |
| AoxI | GGCC | 5 cut(s) | 257, 269, 1443, 1676, 2804 |
| ApaLI | GTGCAC | 1 cut(s) | 981 |
| ApeKI | GCWGC | 5 cut(s) | 245, 1046, 1844, 1967, 2585 |
| ApoI | RAATTY | 6 cut(s) | 7, 207, 679, 704, 1006, 1292 |
| AseI | ATTAAT | 3 cut(s) | 303, 548, 2607 |
| AspLEI | GCGC | 1 cut(s) | 1983 |
| AspS9I | GGNCC | 2 cut(s) | 1546, 1861 |
| AsuHPI | GGTGA | 8 cut(s) | 523, 1015, 1820, 2083, 2171, 2182, 2275, 2414 |
| AsuNHI | GCTAGC | 1 cut(s) | 1795 |
| AvaI | CYCGRG | 1 cut(s) | 1656 |
| AvaII | GGWCC | 2 cut(s) | 1546, 1861 |
| AxyI | CCTNAGG | 1 cut(s) | 441 |
| BaeGI | GKGCMC | 3 cut(s) | 985, 1354, 2059 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 369, 381, 402, 414 |
| BalI | TGGCCA | 2 cut(s) | 259, 1678 |
| BanI | GGYRCC | 4 cut(s) | 1340, 1942, 2171, 2329 |
| BanII | GRGCYC | 1 cut(s) | 1365 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 156, 188 |
| BauI | CACGAG | 1 cut(s) | 80 |
| BbsI | GAAGAC | 3 cut(s) | 1131, 1233, 1789 |
| Bbv12I | GWGCWC | 3 cut(s) | 340, 985, 1365 |
| BbvI | GCAGC | 5 cut(s) | 257, 1033, 1856, 1954, 2597 |
| BccI | CCATC | 6 cut(s) | 568, 743, 881, 1043, 1703, 2441 |
| BceAI | ACGGC | 2 cut(s) | 1915, 2122 |
| BciT130I | CCWGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| BclI | TGATCA | 2 cut(s) | 112, 307 |
| BcoDI | GTCTC | 4 cut(s) | 530, 1074, 1950, 2767 |
| BfaI | CTAG | 4 cut(s) | 687, 1796, 1961, 2223 |
| BfmI | CTRYAG | 3 cut(s) | 240, 961, 1345 |
| BfuAI | ACCTGC | 2 cut(s) | 297, 1490 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1349 |
| BglII | AGATCT | 1 cut(s) | 1760 |
| BisI | GCNGC | 6 cut(s) | 246, 1047, 1322, 1845, 1968, 2586 |
| BlsI | GCNGC | 6 cut(s) | 247, 1048, 1323, 1846, 1969, 2587 |
| Bme1390I | CCNGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| Bme18I | GGWCC | 2 cut(s) | 1546, 1861 |
| BmeT110I | CYCGRG | 1 cut(s) | 1656 |
| BmgT120I | GGNCC | 2 cut(s) | 1546, 1861 |
| BmiI | GGNNCC | 6 cut(s) | 387, 1342, 1863, 1944, 2173, 2331 |
| BmrFI | CCNGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| BmrI | ACTGGG | 1 cut(s) | 2434 |
| BmsI | GCATC | 9 cut(s) | 245, 335, 913, 1033, 1255, 1571, 1585, 1831, 2356 |
| BmtI | GCTAGC | 1 cut(s) | 1799 |
| BmuI | ACTGGG | 1 cut(s) | 2434 |
| BpiI | GAAGAC | 3 cut(s) | 1131, 1233, 1789 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 74, 106 |
| BpmI | CTGGAG | 3 cut(s) | 1229, 1631, 2295 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1195, 1879 |
| BpuEI | CTTGAG | 1 cut(s) | 2071 |
| Bsa29I | ATCGAT | 1 cut(s) | 2674 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1245 |
| BsaI | GGTCTC | 2 cut(s) | 530, 1950 |
| BsaJI | CCNNGG | 4 cut(s) | 153, 569, 1302, 2167 |
| BsaWI | WCCGGW | 1 cut(s) | 604 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 137, 507, 1870, 2066, 2105, 2389 |
| Bse1I | ACTGG | 8 cut(s) | 540, 784, 1153, 1653, 1679, 2364, 2404, 2429 |
| Bse21I | CCTNAGG | 1 cut(s) | 441 |
| Bse3DI | GCAATG | 3 cut(s) | 44, 1323, 2532 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1245 |
| BseBI | CCWGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| BseCI | ATCGAT | 1 cut(s) | 2674 |
| BseDI | CCNNGG | 4 cut(s) | 153, 569, 1302, 2167 |
| BseJI | GATNNNNATC | 1 cut(s) | 1245 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 137, 507, 1870, 2066, 2105, 2389 |
| BseMI | GCAATG | 3 cut(s) | 44, 1323, 2532 |
| BseMII | CTCAG | 3 cut(s) | 455, 747, 1893 |
| BseNI | ACTGG | 8 cut(s) | 540, 784, 1153, 1653, 1679, 2364, 2404, 2429 |
| BseRI | GAGGAG | 3 cut(s) | 429, 1288, 2567 |
| BseSI | GKGCMC | 3 cut(s) | 985, 1354, 2059 |
| BseXI | GCAGC | 5 cut(s) | 257, 1033, 1856, 1954, 2597 |
| BseYI | CCCAGC | 2 cut(s) | 74, 2276 |
| BsgI | GTGCAG | 2 cut(s) | 629, 2604 |
| Bsh1236I | CGCG | 1 cut(s) | 168 |
| BshFI | GGCC | 5 cut(s) | 259, 271, 1445, 1678, 2806 |
| BshNI | GGYRCC | 4 cut(s) | 1340, 1942, 2171, 2329 |
| BshVI | ATCGAT | 1 cut(s) | 2674 |
| BsiHKAI | GWGCWC | 3 cut(s) | 340, 985, 1365 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1656 |
| BsiSI | CCGG | 1 cut(s) | 605 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 137, 507, 1870, 2066, 2105, 2389 |
| BsmAI | GTCTC | 4 cut(s) | 530, 1074, 1950, 2767 |
| BsmI | GAATGC | 1 cut(s) | 2714 |
| BsnI | GGCC | 5 cut(s) | 259, 271, 1445, 1678, 2806 |
| Bso31I | GGTCTC | 2 cut(s) | 530, 1950 |
| BsoBI | CYCGRG | 1 cut(s) | 1656 |
| Bsp1286I | GDGCHC | 5 cut(s) | 340, 985, 1354, 1365, 2059 |
| Bsp19I | CCATGG | 1 cut(s) | 569 |
| BspACI | CCGC | 7 cut(s) | 168, 1014, 1322, 1397, 2290, 2441, 2627 |
| BspANI | GGCC | 5 cut(s) | 259, 271, 1445, 1678, 2806 |
| BspCNI | CTCAG | 3 cut(s) | 454, 748, 1892 |
| BspDI | ATCGAT | 1 cut(s) | 2674 |
| BspFNI | CGCG | 1 cut(s) | 168 |
| BspLI | GGNNCC | 6 cut(s) | 387, 1342, 1863, 1944, 2173, 2331 |
| BspMAI | CTGCAG | 1 cut(s) | 1349 |
| BspMI | ACCTGC | 2 cut(s) | 297, 1490 |
| BspOI | GCTAGC | 1 cut(s) | 1799 |
| BspQI | GCTCTTC | 2 cut(s) | 360, 1977 |
| BspT107I | GGYRCC | 4 cut(s) | 1340, 1942, 2171, 2329 |
| BspTNI | GGTCTC | 2 cut(s) | 530, 1950 |
| BsrBI | CCGCTC | 1 cut(s) | 2292 |
| BsrDI | GCAATG | 3 cut(s) | 44, 1323, 2532 |
| BsrI | ACTGG | 8 cut(s) | 540, 784, 1153, 1653, 1679, 2364, 2404, 2429 |
| BssECI | CCNNGG | 4 cut(s) | 153, 569, 1302, 2167 |
| BssSI | CACGAG | 1 cut(s) | 80 |
| BssT1I | CCWWGG | 2 cut(s) | 153, 569 |
| Bst2BI | CACGAG | 1 cut(s) | 80 |
| Bst2UI | CCWGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| Bst4CI | ACNGT | 8 cut(s) | 285, 382, 835, 1232, 1825, 2073, 2326, 2561 |
| Bst6I | CTCTTC | 3 cut(s) | 360, 1977, 2562 |
| BstC8I | GCNNGC | 5 cut(s) | 419, 1345, 1797, 1985, 2229 |
| BstDEI | CTNAG | 8 cut(s) | 341, 441, 756, 1195, 1436, 1879, 1976, 2579 |
| BstDSI | CCRYGG | 2 cut(s) | 569, 1302 |
| BstEII | GGTNACC | 1 cut(s) | 2089 |
| BstFNI | CGCG | 1 cut(s) | 168 |
| BstHHI | GCGC | 1 cut(s) | 1983 |
| BstMAI | GTCTC | 4 cut(s) | 530, 1074, 1950, 2767 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 242, 1200, 1349, 1496, 2000, 2237, 2360, 2718 |
| BstNI | CCWGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| BstNSI | RCATGY | 3 cut(s) | 1558, 1987, 2231 |
| BstPI | GGTNACC | 1 cut(s) | 2089 |
| BstSCI | CCNGG | 4 cut(s) | 130, 1464, 1630, 2166 |
| BstSFI | CTRYAG | 3 cut(s) | 240, 961, 1345 |
| BstSLI | GKGCMC | 3 cut(s) | 985, 1354, 2059 |
| BstUI | CGCG | 1 cut(s) | 168 |
| BstV1I | GCAGC | 5 cut(s) | 257, 1033, 1856, 1954, 2597 |
| BstV2I | GAAGAC | 3 cut(s) | 1131, 1233, 1789 |
| BstX2I | RGATCY | 5 cut(s) | 619, 721, 1732, 1760, 2163 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 267, 1674, 2319 |
| BstYI | RGATCY | 5 cut(s) | 619, 721, 1732, 1760, 2163 |
| Bsu15I | ATCGAT | 1 cut(s) | 2674 |
| Bsu36I | CCTNAGG | 1 cut(s) | 441 |
| BsuRI | GGCC | 5 cut(s) | 259, 271, 1445, 1678, 2806 |
| BsuTUI | ATCGAT | 1 cut(s) | 2674 |
| BtgI | CCRYGG | 2 cut(s) | 569, 1302 |
| BtsI | GCAGTG | 2 cut(s) | 1478, 2018 |
| BtsIMutI | CAGTG | 9 cut(s) | 387, 547, 1221, 1237, 1478, 1646, 1734, 2018, 2324 |
| BveI | ACCTGC | 2 cut(s) | 297, 1490 |
| Cac8I | GCNNGC | 5 cut(s) | 419, 1345, 1797, 1985, 2229 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2690 |
| CfoI | GCGC | 1 cut(s) | 1983 |
| Cfr13I | GGNCC | 2 cut(s) | 1546, 1861 |
| ClaI | ATCGAT | 1 cut(s) | 2674 |
| CseI | GACGC | 1 cut(s) | 2702 |
| CsiI | ACCWGGT | 2 cut(s) | 130, 1464 |
| Csp6I | GTAC | 7 cut(s) | 164, 286, 329, 398, 714, 1017, 1469 |
| CviQI | GTAC | 7 cut(s) | 164, 286, 329, 398, 714, 1017, 1469 |
| DdeI | CTNAG | 8 cut(s) | 341, 441, 756, 1195, 1436, 1879, 1976, 2579 |
| EaeI | YGGCCR | 2 cut(s) | 257, 1676 |
| Eam1104I | CTCTTC | 3 cut(s) | 360, 1977, 2562 |
| EarI | CTCTTC | 3 cut(s) | 360, 1977, 2562 |
| EciI | GGCGGA | 1 cut(s) | 2456 |
| Ecl136II | GAGCTC | 1 cut(s) | 1363 |
| Eco130I | CCWWGG | 2 cut(s) | 153, 569 |
| Eco147I | AGGCCT | 1 cut(s) | 1445 |
| Eco24I | GRGCYC | 1 cut(s) | 1365 |
| Eco31I | GGTCTC | 2 cut(s) | 530, 1950 |
| Eco47I | GGWCC | 2 cut(s) | 1546, 1861 |
| Eco53kI | GAGCTC | 1 cut(s) | 1363 |
| Eco57I | CTGAAG | 4 cut(s) | 314, 636, 1041, 1245 |
| Eco81I | CCTNAGG | 1 cut(s) | 441 |
| Eco88I | CYCGRG | 1 cut(s) | 1656 |
| Eco91I | GGTNACC | 1 cut(s) | 2089 |
| EcoICRI | GAGCTC | 1 cut(s) | 1363 |
| EcoO65I | GGTNACC | 1 cut(s) | 2089 |
| EcoRI | GAATTC | 1 cut(s) | 1006 |
| EcoRII | CCWGG | 4 cut(s) | 130, 1464, 1630, 2166 |
| EcoT14I | CCWWGG | 2 cut(s) | 153, 569 |
| EcoT22I | ATGCAT | 1 cut(s) | 2371 |
| EcoT38I | GRGCYC | 1 cut(s) | 1365 |
| ErhI | CCWWGG | 2 cut(s) | 153, 569 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 93, 125 |
| FauI | CCCGC | 1 cut(s) | 2297 |
| FauNDI | CATATG | 1 cut(s) | 727 |
| FbaI | TGATCA | 2 cut(s) | 112, 307 |
| FblI | GTMKAC | 1 cut(s) | 24 |
| Fnu4HI | GCNGC | 6 cut(s) | 246, 1047, 1322, 1845, 1968, 2586 |
| FriOI | GRGCYC | 1 cut(s) | 1365 |
| Fsp4HI | GCNGC | 6 cut(s) | 246, 1047, 1322, 1845, 1968, 2586 |
| FspBI | CTAG | 4 cut(s) | 687, 1796, 1961, 2223 |
| GlaI | GCGC | 1 cut(s) | 1982 |
| GluI | GCNGC | 6 cut(s) | 246, 1047, 1322, 1845, 1968, 2586 |
| GsaI | CCCAGC | 2 cut(s) | 78, 2280 |
| GsuI | CTGGAG | 3 cut(s) | 1229, 1631, 2295 |
| HaeIII | GGCC | 5 cut(s) | 259, 271, 1445, 1678, 2806 |
| HapII | CCGG | 1 cut(s) | 605 |
| HgaI | GACGC | 1 cut(s) | 2702 |
| HhaI | GCGC | 1 cut(s) | 1983 |
| Hin6I | GCGC | 1 cut(s) | 1981 |
| HinP1I | GCGC | 1 cut(s) | 1981 |
| HincII | GTYRAC | 4 cut(s) | 25, 367, 804, 861 |
| HindII | GTYRAC | 4 cut(s) | 25, 367, 804, 861 |
| HindIII | AAGCTT | 1 cut(s) | 102 |
| HpaII | CCGG | 1 cut(s) | 605 |
| HphI | GGTGA | 8 cut(s) | 523, 1015, 1820, 2083, 2171, 2182, 2275, 2414 |
| Hpy99I | CGWCG | 2 cut(s) | 26, 29 |
| HpyAV | CCTTC | 3 cut(s) | 1016, 1214, 1268 |
| HpyCH4III | ACNGT | 8 cut(s) | 285, 382, 835, 1232, 1825, 2073, 2326, 2561 |
| HpyCH4IV | ACGT | 1 cut(s) | 2250 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 242, 1200, 1349, 1496, 2000, 2237, 2360, 2718 |
| HpyF3I | CTNAG | 8 cut(s) | 341, 441, 756, 1195, 1436, 1879, 1976, 2579 |
| HpySE526I | ACGT | 1 cut(s) | 2250 |
| HspAI | GCGC | 1 cut(s) | 1981 |
| Ksp22I | TGATCA | 2 cut(s) | 112, 307 |
| LguI | GCTCTTC | 2 cut(s) | 360, 1977 |
| LmnI | GCTCC | 5 cut(s) | 633, 1210, 1368, 1633, 1899 |
| Lsp1109I | GCAGC | 5 cut(s) | 257, 1033, 1856, 1954, 2597 |
| LweI | GCATC | 9 cut(s) | 245, 335, 913, 1033, 1255, 1571, 1585, 1831, 2356 |
| MabI | ACCWGGT | 2 cut(s) | 130, 1464 |
| MaeI | CTAG | 4 cut(s) | 687, 1796, 1961, 2223 |
| MaeII | ACGT | 1 cut(s) | 2250 |
| MaeIII | GTNAC | 9 cut(s) | 955, 1306, 1502, 1738, 1932, 2089, 2188, 2355, 2485 |
| MbiI | CCGCTC | 1 cut(s) | 2292 |
| MfeI | CAATTG | 3 cut(s) | 49, 480, 1599 |
| MflI | RGATCY | 5 cut(s) | 619, 721, 1732, 1760, 2163 |
| MhlI | GDGCHC | 5 cut(s) | 340, 985, 1354, 1365, 2059 |
| MlsI | TGGCCA | 2 cut(s) | 259, 1678 |
| MluNI | TGGCCA | 2 cut(s) | 259, 1678 |
| MlyI | GAGTC | 4 cut(s) | 188, 737, 1076, 2696 |
| MmeI | TCCRAC | 3 cut(s) | 413, 2047, 2374 |
| Mox20I | TGGCCA | 2 cut(s) | 259, 1678 |
| Mph1103I | ATGCAT | 1 cut(s) | 2371 |
| MscI | TGGCCA | 2 cut(s) | 259, 1678 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2052 |
| Msp20I | TGGCCA | 2 cut(s) | 259, 1678 |
| MspA1I | CMGCKG | 2 cut(s) | 2102, 2480 |
| MspI | CCGG | 1 cut(s) | 605 |
| MspR9I | CCNGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| MunI | CAATTG | 3 cut(s) | 49, 480, 1599 |
| Mva1269I | GAATGC | 1 cut(s) | 2714 |
| MvaI | CCWGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| MvnI | CGCG | 1 cut(s) | 168 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 242, 1200, 1349, 1496, 2000, 2237, 2360, 2718 |
| NcoI | CCATGG | 1 cut(s) | 569 |
| NdeI | CATATG | 1 cut(s) | 727 |
| NheI | GCTAGC | 1 cut(s) | 1795 |
| NlaIV | GGNNCC | 6 cut(s) | 387, 1342, 1863, 1944, 2173, 2331 |
| NmuCI | GTSAC | 3 cut(s) | 1932, 2089, 2188 |
| NsiI | ATGCAT | 1 cut(s) | 2371 |
| NspI | RCATGY | 3 cut(s) | 1558, 1987, 2231 |
| OliI | CACNNNNGTG | 1 cut(s) | 2052 |
| PaeI | GCATGC | 2 cut(s) | 1987, 2231 |
| PaeR7I | CTCGAG | 1 cut(s) | 1656 |
| PceI | AGGCCT | 1 cut(s) | 1445 |
| PciI | ACATGT | 1 cut(s) | 1554 |
| PciSI | GCTCTTC | 2 cut(s) | 360, 1977 |
| PctI | GAATGC | 1 cut(s) | 2714 |
| PfeI | GAWTC | 6 cut(s) | 598, 664, 770, 1026, 1172, 1811 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 137, 2066 |
| PkrI | GCNGC | 6 cut(s) | 247, 1048, 1323, 1846, 1969, 2587 |
| PleI | GAGTC | 4 cut(s) | 188, 737, 1075, 2695 |
| PpsI | GAGTC | 4 cut(s) | 188, 737, 1075, 2695 |
| PscI | ACATGT | 1 cut(s) | 1554 |
| PshBI | ATTAAT | 3 cut(s) | 303, 548, 2607 |
| Psp124BI | GAGCTC | 1 cut(s) | 1365 |
| Psp6I | CCWGG | 4 cut(s) | 130, 1464, 1630, 2166 |
| PspEI | GGTNACC | 1 cut(s) | 2089 |
| PspFI | CCCAGC | 2 cut(s) | 74, 2276 |
| PspGI | CCWGG | 4 cut(s) | 130, 1464, 1630, 2166 |
| PspN4I | GGNNCC | 6 cut(s) | 387, 1342, 1863, 1944, 2173, 2331 |
| PspPI | GGNCC | 2 cut(s) | 1546, 1861 |
| PstI | CTGCAG | 1 cut(s) | 1349 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2690 |
| PsuI | RGATCY | 5 cut(s) | 619, 721, 1732, 1760, 2163 |
| PvuII | CAGCTG | 2 cut(s) | 2102, 2480 |
| RsaI | GTAC | 7 cut(s) | 165, 287, 330, 399, 715, 1018, 1470 |
| RsaNI | GTAC | 7 cut(s) | 164, 286, 329, 398, 714, 1017, 1469 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2052 |
| SacI | GAGCTC | 1 cut(s) | 1365 |
| SalI | GTCGAC | 1 cut(s) | 23 |
| SapI | GCTCTTC | 2 cut(s) | 360, 1977 |
| SatI | GCNGC | 6 cut(s) | 246, 1047, 1322, 1845, 1968, 2586 |
| Sau96I | GGNCC | 2 cut(s) | 1546, 1861 |
| SbfI | CCTGCAGG | 1 cut(s) | 1349 |
| SchI | GAGTC | 4 cut(s) | 188, 737, 1076, 2696 |
| ScrFI | CCNGG | 4 cut(s) | 132, 1466, 1632, 2168 |
| SdaI | CCTGCAGG | 1 cut(s) | 1349 |
| SduI | GDGCHC | 5 cut(s) | 340, 985, 1354, 1365, 2059 |
| SexAI | ACCWGGT | 2 cut(s) | 130, 1464 |
| SfaNI | GCATC | 9 cut(s) | 245, 335, 913, 1033, 1255, 1571, 1585, 1831, 2356 |
| SfcI | CTRYAG | 3 cut(s) | 240, 961, 1345 |
| Sfr274I | CTCGAG | 1 cut(s) | 1656 |
| SgrDI | CGTCGACG | 1 cut(s) | 23 |
| SinI | GGWCC | 2 cut(s) | 1546, 1861 |
| SlaI | CTCGAG | 1 cut(s) | 1656 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2052 |
| SmlI | CTYRAG | 2 cut(s) | 1656, 2050 |
| SmoI | CTYRAG | 2 cut(s) | 1656, 2050 |
| SphI | GCATGC | 2 cut(s) | 1987, 2231 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1349 |
| SseBI | AGGCCT | 1 cut(s) | 1445 |
| SsiI | CCGC | 7 cut(s) | 168, 1014, 1322, 1397, 2290, 2441, 2627 |
| SspI | AATATT | 2 cut(s) | 16, 458 |
| SspMI | CTAG | 4 cut(s) | 687, 1796, 1961, 2223 |
| SstI | GAGCTC | 1 cut(s) | 1365 |
| StuI | AGGCCT | 1 cut(s) | 1445 |
| StyD4I | CCNGG | 4 cut(s) | 130, 1464, 1630, 2166 |
| StyI | CCWWGG | 2 cut(s) | 153, 569 |
| TaaI | ACNGT | 8 cut(s) | 285, 382, 835, 1232, 1825, 2073, 2326, 2561 |
| TaiI | ACGT | 1 cut(s) | 2253 |
| TaqI | TCGA | 5 cut(s) | 24, 69, 1657, 1954, 2674 |
| TaqII | GACCGA | 1 cut(s) | 2763 |
| TatI | WGTACW | 2 cut(s) | 328, 713 |
| TauI | GCSGC | 1 cut(s) | 1324 |
| TfiI | GAWTC | 6 cut(s) | 598, 664, 770, 1026, 1172, 1811 |
| TscAI | CASTG | 9 cut(s) | 387, 547, 1228, 1237, 1485, 1653, 1734, 2025, 2324 |
| TseFI | GTSAC | 3 cut(s) | 1932, 2089, 2188 |
| TseI | GCWGC | 5 cut(s) | 245, 1046, 1844, 1967, 2585 |
| Tsp45I | GTSAC | 3 cut(s) | 1932, 2089, 2188 |
| TspDTI | ATGAA | 9 cut(s) | 335, 857, 999, 1269, 1391, 1407, 1467, 2526, 2580 |
| TspGWI | ACGGA | 4 cut(s) | 548, 659, 1291, 2749 |
| TspRI | CASTG | 9 cut(s) | 387, 547, 1228, 1237, 1485, 1653, 1734, 2025, 2324 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 137, 2066 |
| VneI | GTGCAC | 1 cut(s) | 981 |
| VpaK11BI | GGWCC | 2 cut(s) | 1546, 1861 |
| VspI | ATTAAT | 3 cut(s) | 303, 548, 2607 |
| XapI | RAATTY | 6 cut(s) | 7, 207, 679, 704, 1006, 1292 |
| XceI | RCATGY | 3 cut(s) | 1558, 1987, 2231 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2200, 2390 |
| XhoI | CTCGAG | 1 cut(s) | 1656 |
| XmiI | GTMKAC | 1 cut(s) | 24 |
| XspI | CTAG | 4 cut(s) | 687, 1796, 1961, 2223 |
| Zsp2I | ATGCAT | 1 cut(s) | 2371 |