Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001891

Physical Location & Seq

Genomic Coordinates Forward (+)

3006357 .. 3008966

Gene Structure 2610 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGGATATGGGTGACCAAGATAAATTTGAATTAGAGAATAGGAATGATGATCCTATGAATTTTTCACCTGGGATTACACCAGACTGGAGATTTGGTGGCTCCAATATCACAAATACATCCATGGGGTTAGTTCCCACTGGAAATTCTATGGCAGTTAGTAAAGGGGATCTAGTTGGTTCTTCTTCTCGGCCCTCAGCTTCAATGGCGGAATCGTTTAACCCGACACTTTGGGATCACCCAACCAGTTCACAGGACCTGGGGTTTTGTGACATGAATGTTCAGACCAGTGCAAGCACTTCAGACTCAATAGGAATTAGGAAAGGCATTCCTGCCTCTTTGAGAAGTGGTATTGATAGAGCACTTGATATGTGCTGGAATCCGCCGAATTCGATGTTGAAAGGGGGAATGTTCTTGCCAAATGGGCCTGGAGTGCTCCCACAGAGCTTGTCTCAGTTTCCGGCCGATTCTGCATTCATTGAGCGTGCTGCTCGGTTCTCGTGCTTCAATGGCGGGAGTTTTAGTGATATGGTCAACCCTTTTGGTTTCCCTCAATCCATGAGTATGTATTCTAAGAGTGGGGGATTGATGCCGTGGACACAAGAACTTGTAGCCGGTAATGGGTCGAAAGGAGTTCCCGGCGTTCATTCTCAAAGGAATGAGCTAAATGGAGATGTTTCTTTGCCTATGAAGCAAGGGACTACTGAAGGGAGCCCACTGAAGAATGAGAAGAAAAGTGAGAGCCTTGCGAAATCTCATGATGAAGCAAAACACGCTATTGGCGGGTCTGGTAACGAGTCCGATGAAGCTGATTCCAGCGGTGGTGGCGGTGGTGGTCAAGAAGAACCATCTATGCTGGAGGGTGCAAAACCATCGTCTAAGGGCTTTAAGAAAAGGAAAAGGAGTAGGCAGGCTAATGAGCTTGATCAAGCCAATGCACAACAACCCGGTGAATCGGCAATGGATATTACTGAATTTCAAGATAAGGGAGAGCAACAACCAGCTTCAACTCCCAACAAGACTACTGGAAAACAGGGGAAACAAGGGTCTCAAGCATCTGAGCCGCCGAAAGAAGAATATATTCATGTTAGAGCACGAAGAGGCCAGGCAACAAATAGTCATAGTCTTGCAGAAAGAGTCCGAAGGGAGAAAATCAGTGAGAGGATGAAGTTTCTTCAAGATCTTGTGCCTGGATGCAGCAAGGTAACTGGGAAGGCAGTGATGCTGGACGAAATCATTAACTACGTACAATCATTGCAACGGCAGGTTGAGTTTTTGTCGATGAAGCTTGCTACAGTGAATCCGCGACTTGATTTTAACATTGAAGGCCTCCTTGCAAAAGATATCCTTCAGTCACGGGTCGGACCTTCATCTACGTTGGGGTTTTCTCCGGATATGCCTATGATTTATCGTCAACTACATCCATCTCAACCGGGACTTATCCAAGCTGGCCTTCCTGGGATGGGGAGCTCTTCTGATCTACTTCGGAGAGCCATGGGTTCCCAAATGACACAAATGACCGGAGGATTCAAGGAGCCTTCTCAGCTACCAAATGTGTGGGAGGATGAGCTCCACAACGTTGTCCAGATGAGCTATGGAGGCAGTACTCCTCCCAGTAGCCAAGATGTGGATGGATCAACGCCACCGGGCCAGATGAAAGTTGAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009889 GO:0009909 GO:0009911 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

556

Amino Acids

59.64

Weight (kDa)

5.66

Isoelectric Point (pI)

56.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	371 - 419	1.7e-06	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	377 - 422	3.7e-06	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G26260 AT1G68920 AT1G68920 AT1G68920 AT1G68920
fragaria_vesca	FvH4_4g28910 FvH4_4g28910 FvH4_4g28910
malus_domestica	MD13G1054700.v1.1 MD16G1053600.v1.1
prunus_persica	Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1 Prupe.1G297200_v2.0.a1
pyrus_communis	pycom13g04850 pycom16g04670
rosa_chinensis	RchiOBHm_Chr4g0437041
rosa_laevigata	RLG00000006476
rosa_multiflora	Rmu_sc0003436.1_g000014 Rmu_sc0008325.1_g000009
rosa_roxburghii	Rroxscaffold_5G00378110
rosa_rugosa	Rorug04G0297900 Rorug04G0297900 Rorug04G0297900
rosa_samantha	Rh4AG352300 Rh4BG361500 Rh4CG375800 Rh4DG355700
rosa_wichuraiana	Rw4G030840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1252
AccB7I	CCANNNNNTGG	1 cut(s)	1624
AccII	CGCG	1 cut(s)	1303
AccIII	TCCGGA	1 cut(s)	1387
AciI	CCGC	8 cut(s)	206, 380, 510, 780, 816, 825, 1061, 1301
AclI	AACGTT	1 cut(s)	1575
AclWI	GGATC	4 cut(s)	44, 174, 240, 1639
AcoI	YGGCCR	1 cut(s)	459
AcsI	RAATTY	5 cut(s)	23, 58, 142, 385, 971
AcuI	CTGAAG	4 cut(s)	282, 723, 737, 1331
AfaI	GTAC	2 cut(s)	1245, 1603
AfiI	CCNNNNNNNGG	3 cut(s)	618, 1460, 1624
AjnI	CCWGG	6 cut(s)	67, 255, 424, 1101, 1186, 1453
AjuI	GAANNNNNNNTTGG	2 cut(s)	1434, 1466
Alw21I	GWGCWC	5 cut(s)	361, 435, 1093, 1469, 1569
Alw26I	GTCTC	2 cut(s)	453, 1050
AlwI	GGATC	4 cut(s)	44, 174, 240, 1639
AlwNI	CAGNNNCTG	1 cut(s)	256
Aor13HI	TCCGGA	1 cut(s)	1387
AoxI	GGCC	7 cut(s)	188, 422, 459, 1099, 1324, 1447, 1645
ApeKI	GCWGC	2 cut(s)	485, 1194
ApoI	RAATTY	5 cut(s)	23, 58, 142, 385, 971
ArsI	GACNNNNNNTTYG	4 cut(s)	74, 106, 857, 889
Asp700I	GAANNNNTTC	1 cut(s)	1077
AspS9I	GGNCC	5 cut(s)	189, 253, 422, 1361, 1645
AsuC2I	CCSGG	4 cut(s)	636, 945, 1431, 1644
AsuHPI	GGTGA	4 cut(s)	23, 57, 227, 959
AvaII	GGWCC	2 cut(s)	253, 1361
BanII	GRGCYC	3 cut(s)	713, 1469, 1569
BauI	CACGAG	1 cut(s)	496
Bbv12I	GWGCWC	5 cut(s)	361, 435, 1093, 1469, 1569
BbvCI	CCTCAGC	1 cut(s)	193
BbvI	GCAGC	2 cut(s)	472, 1206
BccI	CCATC	5 cut(s)	853, 877, 1429, 1453, 1622
BceAI	ACGGC	2 cut(s)	574, 1274
BcgI	CGANNNNNNTGC	2 cut(s)	852, 886
BciT130I	CCWGG	6 cut(s)	69, 257, 426, 1103, 1188, 1455
BclI	TGATCA	1 cut(s)	922
BcnI	CCSGG	4 cut(s)	636, 945, 1431, 1644
BcoDI	GTCTC	2 cut(s)	453, 1050
BfaI	CTAG	1 cut(s)	170
BfmI	CTRYAG	1 cut(s)	1290
BfuAI	ACCTGC	1 cut(s)	1252
BglI	GCCNNNNNGGC	1 cut(s)	421
BglII	AGATCT	1 cut(s)	1177
BisI	GCNGC	3 cut(s)	486, 1061, 1195
BlsI	GCNGC	3 cut(s)	487, 1062, 1196
BmcAI	AGTACT	1 cut(s)	1603
Bme18I	GGWCC	2 cut(s)	253, 1361
BmgT120I	GGNCC	5 cut(s)	189, 253, 422, 1361, 1645
BmiI	GGNNCC	4 cut(s)	100, 710, 1498, 1533
BmrI	ACTGGG	2 cut(s)	1215, 1605
BmsI	GCATC	4 cut(s)	576, 1061, 1181, 1209
BmuI	ACTGGG	2 cut(s)	1215, 1605
BplI	GAGNNNNNCTC	2 cut(s)	433, 465
BpmI	CTGGAG	3 cut(s)	106, 447, 875
Bpu10I	CCTNAGC	1 cut(s)	193
BpuEI	CTTGAG	1 cut(s)	1032
BpuMI	CCSGG	4 cut(s)	636, 945, 1431, 1644
BsaAI	YACGTR	1 cut(s)	1243
BsaI	GGTCTC	1 cut(s)	1050
BsaJI	CCNNGG	6 cut(s)	68, 120, 256, 590, 1454, 1491
BsaWI	WCCGGW	2 cut(s)	1387, 1517
BsaXI	ACNNNNNCTCC	4 cut(s)	79, 109, 505, 535
Bsc4I	CCNNNNNNNGG	3 cut(s)	618, 1460, 1624
Bse118I	RCCGGY	1 cut(s)	611
Bse1I	ACTGG	7 cut(s)	89, 142, 243, 285, 1027, 1210, 1611
Bse3DI	GCAATG	2 cut(s)	963, 1250
BseAI	TCCGGA	1 cut(s)	1387
BseBI	CCWGG	6 cut(s)	69, 257, 426, 1103, 1188, 1455
BseDI	CCNNGG	6 cut(s)	68, 120, 256, 590, 1454, 1491
BseGI	GGATG	7 cut(s)	116, 1167, 1196, 1417, 1464, 1567, 1633
BseLI	CCNNNNNNNGG	3 cut(s)	618, 1460, 1624
BseMI	GCAATG	2 cut(s)	963, 1250
BseMII	CTCAG	4 cut(s)	207, 464, 1047, 1553
BseNI	ACTGG	7 cut(s)	89, 142, 243, 285, 1027, 1210, 1611
BseRI	GAGGAG	1 cut(s)	1596
BseX3I	CGGCCG	1 cut(s)	459
BseXI	GCAGC	2 cut(s)	472, 1206
Bsh1236I	CGCG	1 cut(s)	1303
Bsh1285I	CGRYCG	1 cut(s)	462
BshFI	GGCC	7 cut(s)	190, 424, 461, 1101, 1326, 1449, 1647
BsiEI	CGRYCG	1 cut(s)	462
BsiHKAI	GWGCWC	5 cut(s)	361, 435, 1093, 1469, 1569
BsiSI	CCGG	8 cut(s)	458, 612, 636, 945, 1388, 1430, 1518, 1643
BslFI	GGGAC	2 cut(s)	709, 1446
BslI	CCNNNNNNNGG	3 cut(s)	618, 1460, 1624
BsmAI	GTCTC	2 cut(s)	453, 1050
BsmFI	GGGAC	2 cut(s)	709, 1446
BsmI	GAATGC	2 cut(s)	324, 470
BsnI	GGCC	7 cut(s)	190, 424, 461, 1101, 1326, 1449, 1647
Bso31I	GGTCTC	1 cut(s)	1050
Bsp1286I	GDGCHC	6 cut(s)	361, 435, 713, 1093, 1469, 1569
Bsp13I	TCCGGA	1 cut(s)	1387
Bsp143I	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
Bsp19I	CCATGG	2 cut(s)	120, 1491
BspACI	CCGC	8 cut(s)	206, 380, 510, 780, 816, 825, 1061, 1301
BspANI	GGCC	7 cut(s)	190, 424, 461, 1101, 1326, 1449, 1647
BspCNI	CTCAG	4 cut(s)	206, 463, 1048, 1552
BspEI	TCCGGA	1 cut(s)	1387
BspFNI	CGCG	1 cut(s)	1303
BspHI	TCATGA	1 cut(s)	754
BspLI	GGNNCC	4 cut(s)	100, 710, 1498, 1533
BspMI	ACCTGC	1 cut(s)	1252
BspPI	GGATC	4 cut(s)	44, 174, 240, 1639
BspQI	GCTCTTC	1 cut(s)	1474
BspTNI	GGTCTC	1 cut(s)	1050
BsrDI	GCAATG	2 cut(s)	963, 1250
BsrFI	RCCGGY	1 cut(s)	611
BsrI	ACTGG	7 cut(s)	89, 142, 243, 285, 1027, 1210, 1611
BssAI	RCCGGY	1 cut(s)	611
BssECI	CCNNGG	6 cut(s)	68, 120, 256, 590, 1454, 1491
BssMI	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
BssSI	CACGAG	1 cut(s)	496
BssT1I	CCWWGG	2 cut(s)	120, 1491
Bst2BI	CACGAG	1 cut(s)	496
Bst2UI	CCWGG	6 cut(s)	69, 257, 426, 1103, 1188, 1455
Bst4CI	ACNGT	1 cut(s)	1294
Bst6I	CTCTTC	2 cut(s)	1090, 1474
BstBAI	YACGTR	1 cut(s)	1243
BstC8I	GCNNGC	5 cut(s)	292, 483, 909, 1287, 1447
BstDEI	CTNAG	6 cut(s)	193, 450, 570, 876, 1056, 1539
BstDSI	CCRYGG	3 cut(s)	120, 590, 1491
BstEII	GGTNACC	1 cut(s)	11
BstF5I	GGATG	7 cut(s)	116, 1167, 1196, 1417, 1464, 1567, 1633
BstFNI	CGCG	1 cut(s)	1303
BstKTI	GATC	7 cut(s)	52, 169, 235, 925, 1180, 1477, 1634
BstMAI	GTCTC	2 cut(s)	453, 1050
BstMBI	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
BstMCI	CGRYCG	1 cut(s)	462
BstNI	CCWGG	6 cut(s)	69, 257, 426, 1103, 1188, 1455
BstPI	GGTNACC	1 cut(s)	11
BstSFI	CTRYAG	1 cut(s)	1290
BstSNI	TACGTA	1 cut(s)	1243
BstUI	CGCG	1 cut(s)	1303
BstV1I	GCAGC	2 cut(s)	472, 1206
BstX2I	RGATCY	2 cut(s)	166, 1177
BstXI	CCANNNNNNTGG	1 cut(s)	1554
BstYI	RGATCY	2 cut(s)	166, 1177
BstZI	CGGCCG	1 cut(s)	459
BsuRI	GGCC	7 cut(s)	190, 424, 461, 1101, 1326, 1449, 1647
BtgI	CCRYGG	3 cut(s)	120, 590, 1491
BtsCI	GGATG	7 cut(s)	116, 1167, 1196, 1417, 1464, 1567, 1633
BtsI	GCAGTG	1 cut(s)	1221
BtsIMutI	CAGTG	6 cut(s)	135, 292, 713, 1159, 1221, 1299
BveI	ACCTGC	1 cut(s)	1252
Cac8I	GCNNGC	5 cut(s)	292, 483, 909, 1287, 1447
CaiI	CAGNNNCTG	1 cut(s)	256
CciI	TCATGA	1 cut(s)	754
Cfr10I	RCCGGY	1 cut(s)	611
Cfr13I	GGNCC	5 cut(s)	189, 253, 422, 1361, 1645
Csp6I	GTAC	2 cut(s)	1244, 1602
CspCI	CAANNNNNGTGG	2 cut(s)	426, 461
CviAII	CATG	6 cut(s)	121, 271, 556, 755, 1082, 1492
CviQI	GTAC	2 cut(s)	1244, 1602
DdeI	CTNAG	6 cut(s)	193, 450, 570, 876, 1056, 1539
DpnI	GATC	7 cut(s)	51, 168, 234, 924, 1179, 1476, 1633
DpnII	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
EaeI	YGGCCR	1 cut(s)	459
EagI	CGGCCG	1 cut(s)	459
Eam1104I	CTCTTC	2 cut(s)	1090, 1474
EarI	CTCTTC	2 cut(s)	1090, 1474
EciI	GGCGGA	2 cut(s)	221, 369
Ecl136II	GAGCTC	2 cut(s)	1467, 1567
EclXI	CGGCCG	1 cut(s)	459
Eco105I	TACGTA	1 cut(s)	1243
Eco130I	CCWWGG	2 cut(s)	120, 1491
Eco147I	AGGCCT	1 cut(s)	1326
Eco24I	GRGCYC	3 cut(s)	713, 1469, 1569
Eco31I	GGTCTC	1 cut(s)	1050
Eco32I	GATATC	1 cut(s)	1342
Eco47I	GGWCC	2 cut(s)	253, 1361
Eco52I	CGGCCG	1 cut(s)	459
Eco53kI	GAGCTC	2 cut(s)	1467, 1567
Eco57I	CTGAAG	4 cut(s)	282, 723, 737, 1331
Eco91I	GGTNACC	1 cut(s)	11
EcoICRI	GAGCTC	2 cut(s)	1467, 1567
EcoO109I	RGGNCCY	1 cut(s)	253
EcoO65I	GGTNACC	1 cut(s)	11
EcoRI	GAATTC	1 cut(s)	385
EcoRII	CCWGG	6 cut(s)	67, 255, 424, 1101, 1186, 1453
EcoRV	GATATC	1 cut(s)	1342
EcoT14I	CCWWGG	2 cut(s)	120, 1491
EcoT38I	GRGCYC	3 cut(s)	713, 1469, 1569
ErhI	CCWWGG	2 cut(s)	120, 1491
FaeI	CATG	6 cut(s)	124, 274, 559, 758, 1085, 1495
FalI	AAGNNNNNCTT	7 cut(s)	1314, 1346, 1329, 1361, 1434, 1466, 1647
FaqI	GGGAC	2 cut(s)	709, 1446
FatI	CATG	6 cut(s)	120, 270, 555, 754, 1081, 1491
FauI	CCCGC	2 cut(s)	503, 773
FbaI	TGATCA	1 cut(s)	922
Fnu4HI	GCNGC	3 cut(s)	486, 1061, 1195
FokI	GGATG	7 cut(s)	103, 1174, 1203, 1404, 1471, 1574, 1640
FriOI	GRGCYC	3 cut(s)	713, 1469, 1569
Fsp4HI	GCNGC	3 cut(s)	486, 1061, 1195
FspBI	CTAG	1 cut(s)	170
GluI	GCNGC	3 cut(s)	486, 1061, 1195
GsuI	CTGGAG	3 cut(s)	106, 447, 875
HaeIII	GGCC	7 cut(s)	190, 424, 461, 1101, 1326, 1449, 1647
HapII	CCGG	8 cut(s)	458, 612, 636, 945, 1388, 1430, 1518, 1643
Hin1II	CATG	6 cut(s)	124, 274, 559, 758, 1085, 1495
HincII	GTYRAC	2 cut(s)	532, 1412
HindII	GTYRAC	2 cut(s)	532, 1412
HindIII	AAGCTT	1 cut(s)	1283
HpaII	CCGG	8 cut(s)	458, 612, 636, 945, 1388, 1430, 1518, 1643
HphI	GGTGA	4 cut(s)	23, 57, 227, 959
Hpy166II	GTNNAC	4 cut(s)	248, 532, 594, 1412
Hpy188I	TCNGA	8 cut(s)	282, 301, 799, 1057, 1139, 1361, 1474, 1485
Hpy188III	TCNNGA	6 cut(s)	755, 836, 977, 1175, 1388, 1582
Hpy8I	GTNNAC	4 cut(s)	248, 532, 594, 1412
HpyAV	CCTTC	8 cut(s)	698, 1134, 1204, 1316, 1355, 1374, 1460, 1545
HpyCH4III	ACNGT	1 cut(s)	1294
HpyCH4IV	ACGT	3 cut(s)	1242, 1373, 1575
HpyCH4V	TGCA	8 cut(s)	290, 470, 863, 935, 1127, 1194, 1255, 1334
HpyF3I	CTNAG	6 cut(s)	193, 450, 570, 876, 1056, 1539
HpySE526I	ACGT	3 cut(s)	1242, 1373, 1575
Hsp92II	CATG	6 cut(s)	124, 274, 559, 758, 1085, 1495
Kpn2I	TCCGGA	1 cut(s)	1387
Ksp22I	TGATCA	1 cut(s)	922
Kzo9I	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
LguI	GCTCTTC	1 cut(s)	1474
LmnI	GCTCC	6 cut(s)	104, 438, 708, 1464, 1531, 1572
Lsp1109I	GCAGC	2 cut(s)	472, 1206
LweI	GCATC	4 cut(s)	576, 1061, 1181, 1209
MaeI	CTAG	1 cut(s)	170
MaeII	ACGT	3 cut(s)	1242, 1373, 1575
MaeIII	GTNAC	5 cut(s)	11, 266, 788, 1201, 1350
MalI	GATC	7 cut(s)	51, 168, 234, 924, 1179, 1476, 1633
MboI	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
MboII	GAAGA	9 cut(s)	171, 174, 730, 739, 851, 1082, 1107, 1163, 1461
MflI	RGATCY	2 cut(s)	166, 1177
MhlI	GDGCHC	6 cut(s)	361, 435, 713, 1093, 1469, 1569
MluCI	AATT	7 cut(s)	23, 29, 58, 142, 312, 385, 971
MlyI	GAGTC	3 cut(s)	296, 803, 1143
MmeI	TCCRAC	1 cut(s)	1339
MroI	TCCGGA	1 cut(s)	1387
MroXI	GAANNNNTTC	1 cut(s)	1077
MseI	TTAA	4 cut(s)	216, 885, 1236, 1314
MslI	CAYNNNNRTG	1 cut(s)	560
MspA1I	CMGCKG	1 cut(s)	816
MspI	CCGG	8 cut(s)	458, 612, 636, 945, 1388, 1430, 1518, 1643
Mva1269I	GAATGC	2 cut(s)	324, 470
MvaI	CCWGG	6 cut(s)	69, 257, 426, 1103, 1188, 1455
MvnI	CGCG	1 cut(s)	1303
NciI	CCSGG	4 cut(s)	636, 945, 1431, 1644
NcoI	CCATGG	2 cut(s)	120, 1491
NdeII	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
NlaIII	CATG	6 cut(s)	124, 274, 559, 758, 1085, 1495
NlaIV	GGNNCC	4 cut(s)	100, 710, 1498, 1533
NmeAIII	GCCGAG	1 cut(s)	166
NmuCI	GTSAC	3 cut(s)	11, 266, 1350
PagI	TCATGA	1 cut(s)	754
PceI	AGGCCT	1 cut(s)	1326
PciSI	GCTCTTC	1 cut(s)	1474
PcsI	WCGNNNNNNNCGW	1 cut(s)	218
PctI	GAATGC	2 cut(s)	324, 470
PdmI	GAANNNNTTC	1 cut(s)	1077
PfeI	GAWTC	7 cut(s)	209, 376, 464, 809, 950, 1297, 1524
PflMI	CCANNNNNTGG	1 cut(s)	1624
PkrI	GCNGC	3 cut(s)	487, 1062, 1196
PleI	GAGTC	3 cut(s)	296, 802, 1142
PpsI	GAGTC	3 cut(s)	296, 802, 1142
Ppu21I	YACGTR	1 cut(s)	1243
PpuMI	RGGWCCY	1 cut(s)	253
Psp124BI	GAGCTC	2 cut(s)	1469, 1569
Psp1406I	AACGTT	1 cut(s)	1575
Psp5II	RGGWCCY	1 cut(s)	253
Psp6I	CCWGG	6 cut(s)	67, 255, 424, 1101, 1186, 1453
PspEI	GGTNACC	1 cut(s)	11
PspGI	CCWGG	6 cut(s)	67, 255, 424, 1101, 1186, 1453
PspN4I	GGNNCC	4 cut(s)	100, 710, 1498, 1533
PspPI	GGNCC	5 cut(s)	189, 253, 422, 1361, 1645
PspPPI	RGGWCCY	1 cut(s)	253
PstNI	CAGNNNCTG	1 cut(s)	256
PsuI	RGATCY	2 cut(s)	166, 1177
RsaI	GTAC	2 cut(s)	1245, 1603
RsaNI	GTAC	2 cut(s)	1244, 1602
RseI	CAYNNNNRTG	1 cut(s)	560
SacI	GAGCTC	2 cut(s)	1469, 1569
SapI	GCTCTTC	1 cut(s)	1474
SaqAI	TTAA	4 cut(s)	216, 885, 1236, 1314
SatI	GCNGC	3 cut(s)	486, 1061, 1195
Sau3AI	GATC	7 cut(s)	49, 166, 232, 922, 1177, 1474, 1631
Sau96I	GGNCC	5 cut(s)	189, 253, 422, 1361, 1645
ScaI	AGTACT	1 cut(s)	1603
SchI	GAGTC	3 cut(s)	296, 803, 1143
SduI	GDGCHC	6 cut(s)	361, 435, 713, 1093, 1469, 1569
SfaNI	GCATC	4 cut(s)	576, 1061, 1181, 1209
SfcI	CTRYAG	1 cut(s)	1290
SinI	GGWCC	2 cut(s)	253, 1361
SmiMI	CAYNNNNRTG	1 cut(s)	560
SmlI	CTYRAG	1 cut(s)	1047
SmoI	CTYRAG	1 cut(s)	1047
SnaBI	TACGTA	1 cut(s)	1243
Sse9I	AATT	7 cut(s)	23, 29, 58, 142, 312, 385, 971
SseBI	AGGCCT	1 cut(s)	1326
SsiI	CCGC	8 cut(s)	206, 380, 510, 780, 816, 825, 1061, 1301
SspMI	CTAG	1 cut(s)	170
SstI	GAGCTC	2 cut(s)	1469, 1569
StuI	AGGCCT	1 cut(s)	1326
StyI	CCWWGG	2 cut(s)	120, 1491
TaaI	ACNGT	1 cut(s)	1294
TaiI	ACGT	3 cut(s)	1245, 1376, 1578
TaqI	TCGA	3 cut(s)	389, 623, 1277
TasI	AATT	7 cut(s)	23, 29, 58, 142, 312, 385, 971
TatI	WGTACW	1 cut(s)	1601
TauI	GCSGC	1 cut(s)	1063
TfiI	GAWTC	7 cut(s)	209, 376, 464, 809, 950, 1297, 1524
Tru1I	TTAA	4 cut(s)	216, 885, 1236, 1314
Tru9I	TTAA	4 cut(s)	216, 885, 1236, 1314
TscAI	CASTG	6 cut(s)	142, 292, 720, 1159, 1221, 1299
TseFI	GTSAC	3 cut(s)	11, 266, 1350
TseI	GCWGC	2 cut(s)	485, 1194
Tsp45I	GTSAC	3 cut(s)	11, 266, 1350
TspRI	CASTG	6 cut(s)	142, 292, 720, 1159, 1221, 1299
Van91I	CCANNNNNTGG	1 cut(s)	1624
VpaK11BI	GGWCC	2 cut(s)	253, 1361
XapI	RAATTY	5 cut(s)	23, 58, 142, 385, 971
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1589, 1625
XmnI	GAANNNNTTC	1 cut(s)	1077
XspI	CTAG	1 cut(s)	170
ZrmI	AGTACT	1 cut(s)	1603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.