Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0012229

Physical Location & Seq

Genomic Coordinates Forward (+)

4543003 .. 4545683

Gene Structure 2681 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g06990.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGAACACAAACCTTGATTCTCACAATGAAAAGCTCTTCACCATTATTCAACCCACCTCGATCACCACTATTCACCCACCAGGTCCACCACCGCTTTCGAGGTTTTTTGTCCTCTATCTCGATCTCCACCTCACTTCACGTGACCCTCGGATGCAAAATCTCAATTTTTTTTCCTTTCATGACTACTGGAACTTCACTCTTTACACTCCCTTCTCACTCCCATTCCCTTCCACATCCATGCCTCCACCACCACTACCACCACACTCCGTCGCGCTCTCAGTCCTGATCCTCCTAACACTCTACTCAGCTGCCACCGCCGCCCACTCATGTTTCCCAAAACCATCGTCCTCCTCCACATTTTCATGTCCACCATTCACTTCACCGCCGCCGTTCCCCTTCTCTTCTTCACCAGGCTGCGGTCACCCTTCTTTCCAAATCAAATGCTCTGCCCCCCACTCCACCATCTCCATCAATAACCTCTCTTTCTCTCTCATCGGCTACGATCCCATCGCCTCCTCACTTCTCCTCTTTCCCCACACCACCAACTCAACAGTCACAAACTGCTCGTCCTCTAACTATCCTTCCATTCCTAGCCGCTCGATCAATATCTCCGCCACCCCATTCCGAATATCCGACGCCTCCTGCTCCCGCCTCTCAGTTCTCGAGCCTTGCTTCCCGCCAAATCTTCCCAACTGCAGCCATTGCCCTTGGGACTGCAAGCTCATCAAACACCCACTCAAGCTTCTCAACGACTGCGGATCTCCGCACCGCCCTGTCACCCAGCAGGGCTGCCACGACGACGTCTTGAGCTTTCTCGACGATTTCCTCAAAATTGGGATCGAGCTGGAGTGGGACGAAGCTCAAGACTCTTACTTTTCCAGCTGCAGAGCTTGCAAGTCCAACAATGGCTTCTGCGGCTTTAACTCCTCCGACCCAAATAAGCCATTCCTCTGTTTTTACGACGAAACTCACCTCACGCCGCCGTGGATTAGCAAAGACAACCCGAATCGAATCGCCATCTTGTCCTCCGTGTTCACATTGGCTTGCTTCCTACTCGTCGTCTCTGTTGTCATAGCCGTCTTCAGGTCCAAAAGATTAAGCTCCGCTGCAACAGAAGAAGACCCAACAACTCTGTTCCTCCACCGCCACCGCTCCGCCAACCTCCTCCCGCCAGTTTTCACATACGAAGAGCTTGAATCCTCAACAAACCAATTCGACCCGAAACGCAAAATCGGGGACGGCGGGTTCGGGTCTGTATATCTGGGTCAGCTCTACGACGGCAGAGTCGTTGCCGTAAAACACCTCCACAAACCCCTCCGCGGCGCCGCCGCATCCGGTAAAGCCTTCTCCAACAAATGCTTCTGTAACGAAATCCTAATACTCTCCTCCATTGACCACCCAAATTTAGTCAAACTCCACGGCTACTGCAGCGACCCGAGAGGCCTCCTTCTCGTCTACGACTACGTCCCCAACGGCACCCTCGCGGACCACCTCCACGGCCCCAAGAGCCTCTACCGGAAAGGGTCGATGACGTGGCAGGTGAGAGTCGACGTTGCTCTGCAAACCGCAATGGTTATGGAGTACCTGCACTTCTCGGTGGTGCCACCGGTGGTCCATAGAGACATAACGTCGTCGAATATCTTCGTCGAGAAAGATATGCGGATTAAAGTCGGGGACTTTGGGCTTTCCAGGCTCTTGGTTTTCCCCGAAAGGACGTCGTCCAGTTCCGGGTACGTTTGGACCGGCCCGCAGGGGACGCCTGGGTACTTGGACCCGGATTACCACCGGTCGTTCCGGTTGACCGACAAGAGTGACGTGTACAGTTTCGGTGTCGTTTTACTGGAGCTGGTTTCGGGGCTGAAGGCGGTGGACCAGCGGAGGGACAAGAGGGAGCTGGCGCTGGCGGATTTGGTGGTGCAGAAAATCCAGACGGGCCTGCTACACCAGGTGGTGGACCCGGTTCTGGTTGTCGACGGGGACGTATCCGACGGCGTGTATGCGGCGGCTGAGCTGGCGTTCAGGTGCGTTGCGGCGGATAAGGACGACAGGCCGGACGCCAAGGAAGTGGTGGAGGAGCTGAAGCGGATCAGGAACCGCACACGTGGGGTGTCCCGGGCTTCGAGTTCGAACGTGATGGGTGAGGACGTGGCAAAGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

720

Amino Acids

79.51

Weight (kDa)

6.94

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69910
fragaria_vesca	FvH4_4g35620
malus_domestica	MD13G1081800.v1.1 MD16G1080900.v1.1
prunus_persica	Prupe.1G265100_v2.0.a1
pyrus_communis	pycom13g07060 pycom16g06990
rosa_chinensis	RchiOBHm_Chr4g0445241
rosa_laevigata	RLG00000005756
rosa_multiflora	Rmu_co8464497.1_g000001 Rmu_sc0000050.1_g000028 Rmu_sc0000050.1_g000029
rosa_roxburghii	Rroxscaffold_5G00385740
rosa_rugosa	Rorug04G0360000
rosa_samantha	Rh4AG421100 Rh4BG433000 Rh4CG447600 Rh4DG429000
rosa_wichuraiana	Rw4G036110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1528
AasI	GACNNNNNNGTC	1 cut(s)	1283
AatII	GACGTC	2 cut(s)	804, 1718
Acc36I	ACCTGC	2 cut(s)	1528, 1593
AccB1I	GGYRCC	3 cut(s)	1322, 1475, 1600
AccB7I	CCANNNNNTGG	1 cut(s)	1951
AccBSI	CCGCTC	2 cut(s)	597, 1152
AccI	GTMKAC	3 cut(s)	1455, 1548, 1971
AccII	CGCG	3 cut(s)	272, 1320, 1484
AclWI	GGATC	5 cut(s)	280, 497, 766, 845, 2093
AcsI	RAATTY	1 cut(s)	1402
AcuI	CTGAAG	3 cut(s)	1066, 1880, 2099
AcvI	CACGTG	2 cut(s)	140, 2102
AcyI	GRCGYC	6 cut(s)	636, 801, 1323, 1715, 1757, 2055
AdeI	CACNNNGTG	1 cut(s)	1948
AfaI	GTAC	4 cut(s)	1583, 1733, 1766, 1820
AfiI	CCNNNNNNNGG	7 cut(s)	416, 1083, 1319, 1728, 1879, 1951, 1963
AflIII	ACRYGT	2 cut(s)	1815, 2099
AgeI	ACCGGT	2 cut(s)	1606, 1785
AgsI	TTSAA	2 cut(s)	50, 1196
AhdI	GACNNNNNGTC	1 cut(s)	1627
AjiI	CACGTC	3 cut(s)	1533, 1816, 2146
AjnI	CCWGG	5 cut(s)	79, 409, 1688, 1759, 1944
AjuI	GAANNNNNNNTTGG	4 cut(s)	893, 925, 1343, 1375
AloI	GAACNNNNNNTCC	2 cut(s)	1229, 1261
Alw26I	GTCTC	2 cut(s)	1066, 1614
AlwI	GGATC	5 cut(s)	280, 497, 766, 845, 2093
Ama87I	CYCGRG	3 cut(s)	662, 1435, 2112
AoxI	GGCC	5 cut(s)	1441, 1498, 1744, 1933, 2048
ApeKI	GCWGC	7 cut(s)	308, 414, 696, 789, 882, 1106, 1428
ApoI	RAATTY	1 cut(s)	1402
ArsI	GACNNNNNNTTYG	6 cut(s)	329, 361, 551, 583, 1229, 1261
AsiGI	ACCGGT	2 cut(s)	1606, 1785
Asp700I	GAANNNNTTC	1 cut(s)	1640
AspLEI	GCGC	3 cut(s)	274, 1325, 1900
AsuC2I	CCSGG	5 cut(s)	1729, 1775, 1958, 2113, 2114
AsuII	TTCGAA	1 cut(s)	2126
AvaI	CYCGRG	3 cut(s)	662, 1435, 2112
AvaII	GGWCC	8 cut(s)	83, 1086, 1486, 1612, 1740, 1771, 1870, 1954
BanI	GGYRCC	3 cut(s)	1322, 1475, 1600
BarI	GAAGNNNNNNTAC	2 cut(s)	1574, 1606
BbrPI	CACGTG	2 cut(s)	140, 2102
BbsI	GAAGAC	2 cut(s)	1072, 1125
BbvI	GCAGC	7 cut(s)	295, 401, 708, 776, 869, 1093, 1440
BccI	CCATC	6 cut(s)	349, 470, 476, 515, 1025, 2128
BciT130I	CCWGG	5 cut(s)	81, 411, 1690, 1761, 1946
BciVI	GTATCC	1 cut(s)	1993
BcnI	CCSGG	5 cut(s)	1729, 1775, 1958, 2113, 2114
BcoDI	GTCTC	2 cut(s)	1066, 1614
BfaI	CTAG	1 cut(s)	591
BfmI	CTRYAG	3 cut(s)	694, 883, 1426
BfoI	RGCGCY	2 cut(s)	1326, 1901
BfuAI	ACCTGC	2 cut(s)	1528, 1593
BfuI	GTATCC	1 cut(s)	1993
BlpI	GCTNAGC	1 cut(s)	2007
Bme18I	GGWCC	8 cut(s)	83, 1086, 1486, 1612, 1740, 1771, 1870, 1954
BmeRI	GACNNNNNGTC	1 cut(s)	1627
BmeT110I	CYCGRG	3 cut(s)	662, 1435, 2112
BmgBI	CACGTC	3 cut(s)	1533, 1816, 2146
BmiI	GGNNCC	7 cut(s)	1324, 1477, 1501, 1602, 1773, 1956, 2093
BmsI	GCATC	2 cut(s)	141, 1340
BpiI	GAAGAC	2 cut(s)	1072, 1125
BpmI	CTGGAG	2 cut(s)	866, 1862
Bpu1102I	GCTNAGC	1 cut(s)	2007
Bpu14I	TTCGAA	1 cut(s)	2126
BpuEI	CTTGAG	3 cut(s)	722, 826, 846
BpuMI	CCSGG	5 cut(s)	1729, 1775, 1958, 2113, 2114
BsaAI	YACGTR	2 cut(s)	140, 2102
BsaBI	GATNNNNATC	1 cut(s)	605
BsaHI	GRCGYC	6 cut(s)	636, 801, 1323, 1715, 1757, 2055
BsaJI	CCNNGG	9 cut(s)	146, 707, 983, 1318, 1417, 1495, 1760, 2058, 2112
BsaWI	WCCGGW	5 cut(s)	1334, 1515, 1606, 1785, 1794
Bsc4I	CCNNNNNNNGG	7 cut(s)	416, 1083, 1319, 1728, 1879, 1951, 1963
Bse118I	RCCGGY	3 cut(s)	1606, 1742, 1785
Bse1I	ACTGG	4 cut(s)	191, 1172, 1722, 1845
Bse3DI	GCAATG	2 cut(s)	700, 1575
Bse8I	GATNNNNATC	1 cut(s)	605
BseBI	CCWGG	5 cut(s)	81, 411, 1690, 1761, 1946
BseDI	CCNNGG	9 cut(s)	146, 707, 983, 1318, 1417, 1495, 1760, 2058, 2112
BseGI	GGATG	3 cut(s)	156, 233, 1331
BseJI	GATNNNNATC	1 cut(s)	605
BseLI	CCNNNNNNNGG	7 cut(s)	416, 1083, 1319, 1728, 1879, 1951, 1963
BseMI	GCAATG	2 cut(s)	700, 1575
BseMII	CTCAG	4 cut(s)	291, 318, 669, 1998
BseNI	ACTGG	4 cut(s)	191, 1172, 1722, 1845
BseRI	GAGGAG	7 cut(s)	340, 505, 515, 916, 1154, 1375, 2087
BseXI	GCAGC	7 cut(s)	295, 401, 708, 776, 869, 1093, 1440
BseYI	CCCAGC	1 cut(s)	780
BsgI	GTGCAG	2 cut(s)	1571, 1937
Bsh1236I	CGCG	3 cut(s)	272, 1320, 1484
Bsh1285I	CGRYCG	1 cut(s)	1790
BshFI	GGCC	5 cut(s)	1443, 1500, 1746, 1935, 2050
BshNI	GGYRCC	3 cut(s)	1322, 1475, 1600
BshTI	ACCGGT	2 cut(s)	1606, 1785
BsiEI	CGRYCG	1 cut(s)	1790
BsiHKCI	CYCGRG	3 cut(s)	662, 1435, 2112
BslFI	GGGAC	9 cut(s)	725, 866, 1250, 1451, 1688, 1768, 1895, 1991, 2095
BslI	CCNNNNNNNGG	7 cut(s)	416, 1083, 1319, 1728, 1879, 1951, 1963
BsmAI	GTCTC	2 cut(s)	1066, 1614
BsmBI	CGTCTC	1 cut(s)	1066
BsmFI	GGGAC	9 cut(s)	725, 866, 1250, 1451, 1688, 1768, 1895, 1991, 2095
BsnI	GGCC	5 cut(s)	1443, 1500, 1746, 1935, 2050
BsoBI	CYCGRG	3 cut(s)	662, 1435, 2112
Bsp119I	TTCGAA	1 cut(s)	2126
Bsp1407I	TGTACA	1 cut(s)	1818
Bsp143I	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
Bsp1720I	GCTNAGC	1 cut(s)	2007
BspANI	GGCC	5 cut(s)	1443, 1500, 1746, 1935, 2050
BspCNI	CTCAG	4 cut(s)	290, 317, 668, 1999
BspFNI	CGCG	3 cut(s)	272, 1320, 1484
BspHI	TCATGA	1 cut(s)	178
BspLI	GGNNCC	7 cut(s)	1324, 1477, 1501, 1602, 1773, 1956, 2093
BspMAI	CTGCAG	3 cut(s)	698, 887, 1430
BspMI	ACCTGC	2 cut(s)	1528, 1593
BspPI	GGATC	5 cut(s)	280, 497, 766, 845, 2093
BspQI	GCTCTTC	2 cut(s)	41, 1182
BspT104I	TTCGAA	1 cut(s)	2126
BspT107I	GGYRCC	3 cut(s)	1322, 1475, 1600
BsrBI	CCGCTC	2 cut(s)	597, 1152
BsrDI	GCAATG	2 cut(s)	700, 1575
BsrFI	RCCGGY	3 cut(s)	1606, 1742, 1785
BsrGI	TGTACA	1 cut(s)	1818
BsrI	ACTGG	4 cut(s)	191, 1172, 1722, 1845
BssAI	RCCGGY	3 cut(s)	1606, 1742, 1785
BssECI	CCNNGG	9 cut(s)	146, 707, 983, 1318, 1417, 1495, 1760, 2058, 2112
BssMI	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
BssNI	GRCGYC	6 cut(s)	636, 801, 1323, 1715, 1757, 2055
BssT1I	CCWWGG	2 cut(s)	707, 2058
Bst2UI	CCWGG	5 cut(s)	81, 411, 1690, 1761, 1946
Bst4CI	ACNGT	2 cut(s)	553, 1823
Bst6I	CTCTTC	3 cut(s)	41, 406, 1182
BstACI	GRCGYC	6 cut(s)	636, 801, 1323, 1715, 1757, 2055
BstAPI	GCANNNNNTGC	2 cut(s)	702, 891
BstAUI	TGTACA	1 cut(s)	1818
BstBAI	YACGTR	2 cut(s)	140, 2102
BstBI	TTCGAA	1 cut(s)	2126
BstC8I	GCNNGC	8 cut(s)	719, 892, 1045, 1748, 1896, 1902, 1937, 2013
BstDEI	CTNAG	4 cut(s)	277, 304, 655, 2007
BstDSI	CCRYGG	4 cut(s)	983, 1318, 1417, 1495
BstEII	GGTNACC	1 cut(s)	419
BstF5I	GGATG	3 cut(s)	156, 233, 1331
BstFNI	CGCG	3 cut(s)	272, 1320, 1484
BstH2I	RGCGCY	2 cut(s)	1326, 1901
BstHHI	GCGC	3 cut(s)	274, 1325, 1900
BstKTI	GATC	8 cut(s)	63, 124, 288, 505, 603, 761, 840, 2088
BstMAI	GTCTC	2 cut(s)	1066, 1614
BstMBI	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
BstMCI	CGRYCG	1 cut(s)	1790
BstNI	CCWGG	5 cut(s)	81, 411, 1690, 1761, 1946
BstPI	GGTNACC	1 cut(s)	419
BstSFI	CTRYAG	3 cut(s)	694, 883, 1426
BstUI	CGCG	3 cut(s)	272, 1320, 1484
BstV1I	GCAGC	7 cut(s)	295, 401, 708, 776, 869, 1093, 1440
BstV2I	GAAGAC	2 cut(s)	1072, 1125
BstX2I	RGATCY	1 cut(s)	758
BstXI	CCANNNNNNTGG	2 cut(s)	1696, 2065
BstYI	RGATCY	1 cut(s)	758
BsuI	GTATCC	1 cut(s)	1993
BsuRI	GGCC	5 cut(s)	1443, 1500, 1746, 1935, 2050
BtgI	CCRYGG	4 cut(s)	983, 1318, 1417, 1495
BtgZI	GCGATG	1 cut(s)	493
BtrI	CACGTC	3 cut(s)	1533, 1816, 2146
BtsCI	GGATG	3 cut(s)	156, 233, 1331
BveI	ACCTGC	2 cut(s)	1528, 1593
Cac8I	GCNNGC	8 cut(s)	719, 892, 1045, 1748, 1896, 1902, 1937, 2013
CciI	TCATGA	1 cut(s)	178
CfoI	GCGC	3 cut(s)	274, 1325, 1900
Cfr10I	RCCGGY	3 cut(s)	1606, 1742, 1785
Cfr42I	CCGCGG	1 cut(s)	1321
Cfr9I	CCCGGG	1 cut(s)	2112
CseI	GACGC	3 cut(s)	644, 1765, 2063
CsiI	ACCWGGT	2 cut(s)	79, 1944
Csp6I	GTAC	4 cut(s)	1582, 1732, 1765, 1819
CspAI	ACCGGT	2 cut(s)	1606, 1785
CviAII	CATG	4 cut(s)	179, 238, 327, 363
CviQI	GTAC	4 cut(s)	1582, 1732, 1765, 1819
DdeI	CTNAG	4 cut(s)	277, 304, 655, 2007
DinI	GGCGCC	1 cut(s)	1324
DpnI	GATC	8 cut(s)	62, 123, 287, 504, 602, 760, 839, 2087
DpnII	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
DraIII	CACNNNGTG	1 cut(s)	1948
DrdI	GACNNNNNNGTC	1 cut(s)	1283
DriI	GACNNNNNGTC	1 cut(s)	1627
DseDI	GACNNNNNNGTC	1 cut(s)	1283
Eam1104I	CTCTTC	3 cut(s)	41, 406, 1182
Eam1105I	GACNNNNNGTC	1 cut(s)	1627
EarI	CTCTTC	3 cut(s)	41, 406, 1182
EciI	GGCGGA	4 cut(s)	601, 1144, 1919, 2048
Eco130I	CCWWGG	2 cut(s)	707, 2058
Eco147I	AGGCCT	1 cut(s)	1443
Eco47I	GGWCC	8 cut(s)	83, 1086, 1486, 1612, 1740, 1771, 1870, 1954
Eco57I	CTGAAG	3 cut(s)	1066, 1880, 2099
Eco72I	CACGTG	2 cut(s)	140, 2102
Eco88I	CYCGRG	3 cut(s)	662, 1435, 2112
Eco91I	GGTNACC	1 cut(s)	419
EcoO65I	GGTNACC	1 cut(s)	419
EcoRII	CCWGG	5 cut(s)	79, 409, 1688, 1759, 1944
EcoT14I	CCWWGG	2 cut(s)	707, 2058
EgeI	GGCGCC	1 cut(s)	1324
EheI	GGCGCC	1 cut(s)	1324
ErhI	CCWWGG	2 cut(s)	707, 2058
Esp3I	CGTCTC	1 cut(s)	1066
FaeI	CATG	4 cut(s)	182, 241, 330, 366
FaqI	GGGAC	9 cut(s)	725, 866, 1250, 1451, 1688, 1768, 1895, 1991, 2095
FatI	CATG	4 cut(s)	178, 237, 326, 362
FauI	CCCGC	5 cut(s)	656, 684, 1176, 1235, 1755
FblI	GTMKAC	3 cut(s)	1455, 1548, 1971
FokI	GGATG	3 cut(s)	163, 220, 1318
FspBI	CTAG	1 cut(s)	591
GlaI	GCGC	3 cut(s)	273, 1324, 1899
GsaI	CCCAGC	1 cut(s)	784
GsuI	CTGGAG	2 cut(s)	866, 1862
HaeII	RGCGCY	2 cut(s)	1326, 1901
HaeIII	GGCC	5 cut(s)	1443, 1500, 1746, 1935, 2050
HgaI	GACGC	3 cut(s)	644, 1765, 2063
HhaI	GCGC	3 cut(s)	274, 1325, 1900
Hin1I	GRCGYC	6 cut(s)	636, 801, 1323, 1715, 1757, 2055
Hin1II	CATG	4 cut(s)	182, 241, 330, 366
Hin6I	GCGC	3 cut(s)	272, 1323, 1898
HinP1I	GCGC	3 cut(s)	272, 1323, 1898
HincII	GTYRAC	3 cut(s)	1549, 1800, 1972
HindII	GTYRAC	3 cut(s)	1549, 1800, 1972
HindIII	AAGCTT	1 cut(s)	740
HinfI	GANTC	7 cut(s)	17, 866, 1006, 1011, 1196, 1284, 1545
Hpy188I	TCNGA	5 cut(s)	150, 626, 634, 931, 1987
HpyAV	CCTTC	8 cut(s)	220, 237, 406, 435, 591, 1354, 1457, 1855
HpyCH4III	ACNGT	2 cut(s)	553, 1823
HpyF3I	CTNAG	4 cut(s)	277, 304, 655, 2007
Hsp92I	GRCGYC	6 cut(s)	636, 801, 1323, 1715, 1757, 2055
Hsp92II	CATG	4 cut(s)	182, 241, 330, 366
HspAI	GCGC	3 cut(s)	272, 1323, 1898
KasI	GGCGCC	1 cut(s)	1322
KspI	CCGCGG	1 cut(s)	1321
Kzo9I	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
LguI	GCTCTTC	2 cut(s)	41, 1182
LmnI	GCTCC	6 cut(s)	650, 1106, 1157, 1843, 1891, 2074
Lsp1109I	GCAGC	7 cut(s)	295, 401, 708, 776, 869, 1093, 1440
LweI	GCATC	2 cut(s)	141, 1340
MabI	ACCWGGT	2 cut(s)	79, 1944
MaeI	CTAG	1 cut(s)	591
MaeIII	GTNAC	6 cut(s)	140, 419, 553, 775, 1364, 1811
MalI	GATC	8 cut(s)	62, 123, 287, 504, 602, 760, 839, 2087
MbiI	CCGCTC	2 cut(s)	597, 1152
MboI	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
MboII	GAAGA	9 cut(s)	28, 393, 396, 677, 1072, 1127, 1130, 1199, 1633
MflI	RGATCY	1 cut(s)	758
MluCI	AATT	4 cut(s)	163, 831, 1211, 1402
Mly113I	GGCGCC	1 cut(s)	1323
MlyI	GAGTC	3 cut(s)	860, 1293, 1554
MmeI	TCCRAC	5 cut(s)	657, 924, 954, 1374, 2010
MroXI	GAANNNNTTC	1 cut(s)	1640
MseI	TTAA	3 cut(s)	921, 1097, 1665
MslI	CAYNNNNRTG	2 cut(s)	236, 361
MspA1I	CMGCKG	5 cut(s)	308, 882, 1106, 1320, 1876
MvaI	CCWGG	5 cut(s)	81, 411, 1690, 1761, 1946
MvnI	CGCG	3 cut(s)	272, 1320, 1484
NarI	GGCGCC	1 cut(s)	1323
NciI	CCSGG	5 cut(s)	1729, 1775, 1958, 2113, 2114
NdeII	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
NlaIII	CATG	4 cut(s)	182, 241, 330, 366
NlaIV	GGNNCC	7 cut(s)	1324, 1477, 1501, 1602, 1773, 1956, 2093
NmuCI	GTSAC	5 cut(s)	140, 419, 553, 775, 1811
NspV	TTCGAA	1 cut(s)	2126
PaeR7I	CTCGAG	1 cut(s)	662
PagI	TCATGA	1 cut(s)	178
PaqCI	CACCTGC	1 cut(s)	1528
PceI	AGGCCT	1 cut(s)	1443
PciSI	GCTCTTC	2 cut(s)	41, 1182
PcsI	WCGNNNNNNNCGW	2 cut(s)	1284, 1977
PdmI	GAANNNNTTC	1 cut(s)	1640
PfeI	GAWTC	4 cut(s)	17, 1006, 1011, 1196
PflFI	GACNNNGTC	3 cut(s)	800, 1463, 1717
PflMI	CCANNNNNTGG	1 cut(s)	1951
PinAI	ACCGGT	2 cut(s)	1606, 1785
PleI	GAGTC	3 cut(s)	860, 1292, 1553
PluTI	GGCGCC	1 cut(s)	1326
PmaCI	CACGTG	2 cut(s)	140, 2102
PmlI	CACGTG	2 cut(s)	140, 2102
PpsI	GAGTC	3 cut(s)	860, 1292, 1553
Ppu21I	YACGTR	2 cut(s)	140, 2102
Psp6I	CCWGG	5 cut(s)	79, 409, 1688, 1759, 1944
PspCI	CACGTG	2 cut(s)	140, 2102
PspEI	GGTNACC	1 cut(s)	419
PspFI	CCCAGC	1 cut(s)	780
PspGI	CCWGG	5 cut(s)	79, 409, 1688, 1759, 1944
PspN4I	GGNNCC	7 cut(s)	1324, 1477, 1501, 1602, 1773, 1956, 2093
PstI	CTGCAG	3 cut(s)	698, 887, 1430
PsuI	RGATCY	1 cut(s)	758
PsyI	GACNNNGTC	3 cut(s)	800, 1463, 1717
PvuII	CAGCTG	2 cut(s)	308, 882
RsaI	GTAC	4 cut(s)	1583, 1733, 1766, 1820
RsaNI	GTAC	4 cut(s)	1582, 1732, 1765, 1819
RseI	CAYNNNNRTG	2 cut(s)	236, 361
SacII	CCGCGG	1 cut(s)	1321
SalI	GTCGAC	2 cut(s)	1547, 1970
SapI	GCTCTTC	2 cut(s)	41, 1182
SaqAI	TTAA	3 cut(s)	921, 1097, 1665
Sau3AI	GATC	8 cut(s)	60, 121, 285, 502, 600, 758, 837, 2085
SchI	GAGTC	3 cut(s)	860, 1293, 1554
SexAI	ACCWGGT	2 cut(s)	79, 1944
SfaNI	GCATC	2 cut(s)	141, 1340
SfcI	CTRYAG	3 cut(s)	694, 883, 1426
SfoI	GGCGCC	1 cut(s)	1324
Sfr274I	CTCGAG	1 cut(s)	662
Sfr303I	CCGCGG	1 cut(s)	1321
SfuI	TTCGAA	1 cut(s)	2126
SgrAI	CRCCGGYG	1 cut(s)	1606
SgrBI	CCGCGG	1 cut(s)	1321
SinI	GGWCC	8 cut(s)	83, 1086, 1486, 1612, 1740, 1771, 1870, 1954
SlaI	CTCGAG	1 cut(s)	662
SmaI	CCCGGG	1 cut(s)	2114
SmiMI	CAYNNNNRTG	2 cut(s)	236, 361
SmlI	CTYRAG	4 cut(s)	662, 737, 805, 861
SmoI	CTYRAG	4 cut(s)	662, 737, 805, 861
Sse9I	AATT	4 cut(s)	163, 831, 1211, 1402
SseBI	AGGCCT	1 cut(s)	1443
SspDI	GGCGCC	1 cut(s)	1322
SspMI	CTAG	1 cut(s)	591
StuI	AGGCCT	1 cut(s)	1443
StyI	CCWWGG	2 cut(s)	707, 2058
TaaI	ACNGT	2 cut(s)	553, 1823
TaqII	GACCGA	1 cut(s)	1817
TasI	AATT	4 cut(s)	163, 831, 1211, 1402
TatI	WGTACW	1 cut(s)	1818
TfiI	GAWTC	4 cut(s)	17, 1006, 1011, 1196
Tru1I	TTAA	3 cut(s)	921, 1097, 1665
Tru9I	TTAA	3 cut(s)	921, 1097, 1665
TseFI	GTSAC	5 cut(s)	140, 419, 553, 775, 1811
TseI	GCWGC	7 cut(s)	308, 414, 696, 789, 882, 1106, 1428
Tsp45I	GTSAC	5 cut(s)	140, 419, 553, 775, 1811
TspDTI	ATGAA	4 cut(s)	17, 42, 167, 351
TspGWI	ACGGA	2 cut(s)	256, 1018
TspMI	CCCGGG	1 cut(s)	2112
Tth111I	GACNNNGTC	3 cut(s)	800, 1463, 1717
Van91I	CCANNNNNTGG	1 cut(s)	1951
VpaK11BI	GGWCC	8 cut(s)	83, 1086, 1486, 1612, 1740, 1771, 1870, 1954
XapI	RAATTY	1 cut(s)	1402
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2065
XhoI	CTCGAG	1 cut(s)	662
XmaI	CCCGGG	1 cut(s)	2112
XmiI	GTMKAC	3 cut(s)	1455, 1548, 1971
XmnI	GAANNNNTTC	1 cut(s)	1640
XspI	CTAG	1 cut(s)	591
ZraI	GACGTC	2 cut(s)	802, 1716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.