Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0012229

Physical Location & Seq

Genomic Coordinates Reverse (-)

68231149 .. 68234936

Gene Structure 3788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG447600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGCCTCCGTCGCTCGCTGCCTTTGTCTTCTTCTTCTCAGTTCTTCGCCTCATTTCCTCAGTCTACTCGCACTTATGCTCACCGCACCATCAATCTCTATGCCCACCCTTTACTTCAACTCCTCCTTTTCCCTTCTCTTTCTCACCTGGCTGTGGCCACCCCTCTTTCCAAATCAAATGCTATGCAAATCACTCCATAATCACCATTAACAACCTCGCTTTCTCCCTCCTCCACTACGAGCCCAACTCCACATCTCTCCTTCTCTCCCCCTACATCACCAACTCGACAATTAACGCTAAATCCCTTAGCACTAGCACTAGCACTAGCAACTGCTCATCCCCTCACTTTCTTTCAATCCCCAGCCGCTCCATCAACCTCTCCTCTTCCCCTTTTCGCTTCTCCGACGGTTCCTGTAACCGCCTCTCTGTTCTCAAACCTTGCTCCCCCCCAAATCTTCCTAATTGCAGCCATTGTCCCTGGGAATGCAAGCTCATAAAGAGCCCGGCCAAGCTACTCCATGACTGTGGATCTAGTCGCAGCTCTGTTCCCAACCAGGGCTGCCAAGACGATGTCTTGGGATATCTTGACGACTTCCTCCAACTCGGGATCGAGCTCGAGTGGGACGAAGCTCAAGATTCCTACTTCTCAAGCTGCAGAGATTGCGAAGCCAACAACGGCTTCTGCGGCTTCAATTCCTCCGACCCATCACGGCAATTCCTCTGTCTCCACGCCAAAGCTCAACTCTCACCCCCATGGATTAGCAAGCACAACCCCCATCGCGTCGCCATTTTGTGCTCGGTCTTGGCAGTGACTTGTTTGATGGTCATGGTTTCAATTTCTTTAGCCATAATCAGGTCCAGAAGACTACACTCCGCCGCCACAGAAGAAGACCCGACCACATTGTTCCTCCAGCGCCACCGCTCCGCCAGTCTCCTCCCGCCGGTATTCACCTACGAAGAGCTGGAATCATCCACCAACAAATTCGACACCAGGCGCAAAATCGGCGACGGCGGGTTCGGGTCAGTCTACCTGGGCCAGCTCTACGACAGCCGCGTCGTGGCCGTAAAGTACCTCCACAAGCCCCACCACTCCGCCGCCGCCTCCGGCAAGGCCTTCTGCAACGAAATCCTAATCCTCTCCTCAATTGACCATCCTAACCTCGTCAAGCTCCACGGCTACTGCAGCGATCCCAGAGGCCTTCTGTTGGTCTATGATTACGTCCCCAACGGCACTCTCGCCGACCATCTCCACGGCCCGAAGAGCCTCTACCGGAAAGGGTCGATGACGTGGCAGGTGAGGGTTGATATAGCTTTGCAAACCGCCATGGTTATGGAGTACTTGCATTTCTCGGTGGTGCCTCCGGTGGTTCACAGAGACATAACTTCGTCTAATATTTTCGTGGAAAGAGACATGAGAATCAAAGTCGGGGATTTTGGGCTGTCGAGGCTTTTGGTGTTCCCGGAAACGACGTCGTCGAGTTCGGGGTACGTTTGGACCGGGCCTCAGGGTACTCCGGGTTACTTGGACCCGGATTACCACCGGTCGTTCCGGTTGACGGATAAGAGTGACGTGTACAGCTTCGGGGTGGTGATGTTGGAGTTGATTTCGGGTCAGAAGGCGGTGGACCAGAGGAGGGACAAGAGGGAGTTGGCTTTGGCGGATATGATGGTGTCCAAGATCCAGATGGGCCTGCTCCATCAGGTAGTCGACCCGGTTCTGATTGTGGATGGGAATGTGACGGATGGTGTTGACGTGGCGGCAGAGCTGGCGTTCAGGTGCGTCGCGGCGGAGAAGGACGACCGTCCAGATGCGAGGGAGGTGGTGCAGGAGCTGAGGCGGATCAGGGGCCGTACACGTGGGATTAGCCGCGCTTCGAGTTCGAATGTGATTGGTGCTGACGTGGCAAAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

637

Amino Acids

70.39

Weight (kDa)

7.8

Isoelectric Point (pI)

43.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WAK_assoc	PF14380	191 - 243	1e-05	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	329 - 609	1.8e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	330 - 547	5.7e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69910
fragaria_vesca	FvH4_4g35620
malus_domestica	MD13G1081800.v1.1 MD16G1080900.v1.1
prunus_persica	Prupe.1G265100_v2.0.a1
pyrus_communis	pycom13g07060 pycom16g06990
rosa_chinensis	RchiOBHm_Chr4g0445241
rosa_laevigata	RLG00000005756
rosa_multiflora	Rmu_co8464497.1_g000001 Rmu_sc0000050.1_g000028 Rmu_sc0000050.1_g000029
rosa_roxburghii	Rroxscaffold_5G00385740
rosa_rugosa	Rorug04G0360000
rosa_samantha	Rh4AG421100 Rh4BG433000 Rh4CG447600 Rh4DG429000
rosa_wichuraiana	Rw4G036110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1282
AasI	GACNNNNNNGTC	1 cut(s)	1052
AatII	GACGTC	1 cut(s)	1472
Acc36I	ACCTGC	1 cut(s)	1282
AccB1I	GGYRCC	1 cut(s)	1354
AccBSI	CCGCTC	2 cut(s)	366, 921
AccI	GTMKAC	3 cut(s)	63, 1026, 1707
AccII	CGCG	4 cut(s)	780, 1053, 1784, 1869
AclWI	GGATC	5 cut(s)	535, 614, 1181, 1672, 1847
AcoI	YGGCCR	3 cut(s)	154, 504, 1059
AcsI	RAATTY	1 cut(s)	980
AcvI	CACGTG	1 cut(s)	1856
AcyI	GRCGYC	1 cut(s)	1469
AfaI	GTAC	6 cut(s)	1070, 1337, 1487, 1510, 1574, 1852
AfiI	CCNNNNNNNGG	8 cut(s)	152, 554, 852, 940, 1057, 1204, 1555, 1633
AflIII	ACRYGT	2 cut(s)	1569, 1853
AgeI	ACCGGT	1 cut(s)	1539
AgsI	TTSAA	4 cut(s)	117, 354, 691, 834
AjiI	CACGTC	4 cut(s)	1287, 1570, 1753, 1900
AjnI	CCWGG	5 cut(s)	145, 476, 552, 989, 1029
AjuI	GAANNNNNNNTTGG	2 cut(s)	662, 694
Alw21I	GWGCWC	2 cut(s)	615, 797
Alw26I	GTCTC	4 cut(s)	728, 935, 1368, 1401
AlwI	GGATC	5 cut(s)	535, 614, 1181, 1672, 1847
AlwNI	CAGNNNCTG	1 cut(s)	1831
Ama87I	CYCGRG	2 cut(s)	602, 614
ApeKI	GCWGC	6 cut(s)	17, 465, 537, 558, 651, 1182
ApoI	RAATTY	1 cut(s)	980
ArsI	GACNNNNNNTTYG	2 cut(s)	998, 1030
AsiGI	ACCGGT	1 cut(s)	1539
AspLEI	GCGC	3 cut(s)	915, 996, 1871
AspS9I	GGNCC	9 cut(s)	855, 1033, 1253, 1494, 1499, 1525, 1624, 1687, 1846
AsuC2I	CCSGG	6 cut(s)	503, 1460, 1498, 1515, 1529, 1712
AsuHPI	GGTGA	8 cut(s)	72, 135, 193, 268, 738, 940, 1306, 1600
AsuII	TTCGAA	1 cut(s)	1880
AvaI	CYCGRG	2 cut(s)	602, 614
AvaII	GGWCC	4 cut(s)	855, 1494, 1525, 1624
AxyI	CCTNAGG	1 cut(s)	1503
BalI	TGGCCA	1 cut(s)	156
BanI	GGYRCC	1 cut(s)	1354
BanII	GRGCYC	3 cut(s)	243, 503, 615
BarI	GAAGNNNNNNTAC	2 cut(s)	1250, 1282
BbrPI	CACGTG	1 cut(s)	1856
BbsI	GAAGAC	3 cut(s)	19, 868, 894
Bbv12I	GWGCWC	2 cut(s)	615, 797
BbvCI	CCTCAGC	1 cut(s)	1832
BbvI	GCAGC	6 cut(s)	4, 477, 545, 549, 638, 1194
BceAI	ACGGC	8 cut(s)	691, 725, 1024, 1046, 1189, 1243, 1267, 1833
BciT130I	CCWGG	5 cut(s)	147, 478, 554, 991, 1031
BcnI	CCSGG	6 cut(s)	503, 1460, 1498, 1515, 1529, 1712
BcoDI	GTCTC	4 cut(s)	728, 935, 1368, 1401
BfaI	CTAG	4 cut(s)	312, 318, 324, 531
BfmI	CTRYAG	2 cut(s)	652, 1180
BfoI	RGCGCY	1 cut(s)	916
BfuAI	ACCTGC	1 cut(s)	1282
BmcAI	AGTACT	1 cut(s)	1337
Bme18I	GGWCC	4 cut(s)	855, 1494, 1525, 1624
BmeT110I	CYCGRG	2 cut(s)	602, 614
BmgBI	CACGTC	4 cut(s)	1287, 1570, 1753, 1900
BmgT120I	GGNCC	9 cut(s)	855, 1033, 1253, 1494, 1499, 1525, 1624, 1687, 1846
BmiI	GGNNCC	4 cut(s)	409, 1356, 1527, 1847
BmsI	GCATC	1 cut(s)	1798
BoxI	GACNNNNGTC	1 cut(s)	1800
BpiI	GAAGAC	3 cut(s)	19, 868, 894
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	1 cut(s)	893
Bpu10I	CCTNAGC	2 cut(s)	305, 1832
Bpu14I	TTCGAA	1 cut(s)	1880
BpuEI	CTTGAG	2 cut(s)	615, 631
BpuMI	CCSGG	6 cut(s)	503, 1460, 1498, 1515, 1529, 1712
BsaAI	YACGTR	1 cut(s)	1856
BsaHI	GRCGYC	1 cut(s)	1469
BsaJI	CCNNGG	8 cut(s)	476, 477, 553, 752, 1030, 1171, 1249, 1323
BsaWI	WCCGGW	4 cut(s)	1269, 1360, 1539, 1548
BsaXI	ACNNNNNCTCC	2 cut(s)	103, 133
Bsc4I	CCNNNNNNNGG	8 cut(s)	152, 554, 852, 940, 1057, 1204, 1555, 1633
Bse118I	RCCGGY	2 cut(s)	940, 1539
Bse1I	ACTGG	1 cut(s)	927
Bse21I	CCTNAGG	1 cut(s)	1503
BseBI	CCWGG	5 cut(s)	147, 478, 554, 991, 1031
BseDI	CCNNGG	8 cut(s)	476, 477, 553, 752, 1030, 1171, 1249, 1323
BseGI	GGATG	5 cut(s)	335, 968, 1150, 1732, 1747
BseLI	CCNNNNNNNGG	8 cut(s)	152, 554, 852, 940, 1057, 1204, 1555, 1633
BseMII	CTCAG	4 cut(s)	51, 72, 1517, 1823
BseNI	ACTGG	1 cut(s)	927
BseRI	GAGGAG	6 cut(s)	111, 218, 370, 923, 1129, 1645
BseXI	GCAGC	6 cut(s)	4, 477, 545, 549, 638, 1194
BseYI	CCCAGC	1 cut(s)	359
BsgI	GTGCAG	1 cut(s)	1844
Bsh1236I	CGCG	4 cut(s)	780, 1053, 1784, 1869
Bsh1285I	CGRYCG	2 cut(s)	1544, 1801
BshNI	GGYRCC	1 cut(s)	1354
BshTI	ACCGGT	1 cut(s)	1539
BsiEI	CGRYCG	2 cut(s)	1544, 1801
BsiHKAI	GWGCWC	2 cut(s)	615, 797
BsiHKCI	CYCGRG	2 cut(s)	602, 614
BslFI	GGGAC	4 cut(s)	459, 635, 1205, 1649
BslI	CCNNNNNNNGG	8 cut(s)	152, 554, 852, 940, 1057, 1204, 1555, 1633
BsmAI	GTCTC	4 cut(s)	728, 935, 1368, 1401
BsmFI	GGGAC	4 cut(s)	459, 635, 1205, 1649
BsmI	GAATGC	1 cut(s)	488
BsoBI	CYCGRG	2 cut(s)	602, 614
Bsp119I	TTCGAA	1 cut(s)	1880
Bsp1286I	GDGCHC	4 cut(s)	243, 503, 615, 797
Bsp1407I	TGTACA	1 cut(s)	1572
Bsp143I	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
Bsp19I	CCATGG	2 cut(s)	752, 1323
BspCNI	CTCAG	4 cut(s)	50, 71, 1516, 1824
BspFNI	CGCG	4 cut(s)	780, 1053, 1784, 1869
BspLI	GGNNCC	4 cut(s)	409, 1356, 1527, 1847
BspMAI	CTGCAG	2 cut(s)	656, 1184
BspMI	ACCTGC	1 cut(s)	1282
BspPI	GGATC	5 cut(s)	535, 614, 1181, 1672, 1847
BspQI	GCTCTTC	2 cut(s)	951, 1253
BspT104I	TTCGAA	1 cut(s)	1880
BspT107I	GGYRCC	1 cut(s)	1354
BsrBI	CCGCTC	2 cut(s)	366, 921
BsrFI	RCCGGY	2 cut(s)	940, 1539
BsrGI	TGTACA	1 cut(s)	1572
BsrI	ACTGG	1 cut(s)	927
BssAI	RCCGGY	2 cut(s)	940, 1539
BssECI	CCNNGG	8 cut(s)	476, 477, 553, 752, 1030, 1171, 1249, 1323
BssMI	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
BssNI	GRCGYC	1 cut(s)	1469
BssT1I	CCWWGG	2 cut(s)	752, 1323
Bst2UI	CCWGG	5 cut(s)	147, 478, 554, 991, 1031
Bst4CI	ACNGT	3 cut(s)	407, 524, 1802
Bst6I	CTCTTC	3 cut(s)	388, 951, 1253
BstACI	GRCGYC	1 cut(s)	1469
BstAPI	GCANNNNNTGC	1 cut(s)	660
BstAUI	TGTACA	1 cut(s)	1572
BstBAI	YACGTR	1 cut(s)	1856
BstBI	TTCGAA	1 cut(s)	1880
BstC8I	GCNNGC	6 cut(s)	15, 488, 764, 1037, 1691, 1767
BstDEI	CTNAG	5 cut(s)	37, 58, 305, 1503, 1832
BstDSI	CCRYGG	4 cut(s)	752, 1171, 1249, 1323
BstF5I	GGATG	5 cut(s)	335, 968, 1150, 1732, 1747
BstFNI	CGCG	4 cut(s)	780, 1053, 1784, 1869
BstH2I	RGCGCY	1 cut(s)	916
BstHHI	GCGC	3 cut(s)	915, 996, 1871
BstKTI	GATC	5 cut(s)	530, 609, 1189, 1680, 1842
BstMAI	GTCTC	4 cut(s)	728, 935, 1368, 1401
BstMBI	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
BstMCI	CGRYCG	2 cut(s)	1544, 1801
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 660, 684, 1002, 1182, 1260, 1444, 1766, 1901
BstNI	CCWGG	5 cut(s)	147, 478, 554, 991, 1031
BstPAI	GACNNNNGTC	1 cut(s)	1800
BstSFI	CTRYAG	2 cut(s)	652, 1180
BstUI	CGCG	4 cut(s)	780, 1053, 1784, 1869
BstV1I	GCAGC	6 cut(s)	4, 477, 545, 549, 638, 1194
BstV2I	GAAGAC	3 cut(s)	19, 868, 894
BstX2I	RGATCY	2 cut(s)	527, 1677
BstXI	CCANNNNNNTGG	2 cut(s)	524, 1330
BstYI	RGATCY	2 cut(s)	527, 1677
Bsu36I	CCTNAGG	1 cut(s)	1503
BtgI	CCRYGG	4 cut(s)	752, 1171, 1249, 1323
BtgZI	GCGATG	1 cut(s)	761
BtrI	CACGTC	4 cut(s)	1287, 1570, 1753, 1900
BtsCI	GGATG	5 cut(s)	335, 968, 1150, 1732, 1747
BtsI	GCAGTG	1 cut(s)	813
BtsIMutI	CAGTG	1 cut(s)	813
BveI	ACCTGC	1 cut(s)	1282
Cac8I	GCNNGC	6 cut(s)	15, 488, 764, 1037, 1691, 1767
CaiI	CAGNNNCTG	1 cut(s)	1831
CfoI	GCGC	3 cut(s)	915, 996, 1871
Cfr10I	RCCGGY	2 cut(s)	940, 1539
Cfr13I	GGNCC	9 cut(s)	855, 1033, 1253, 1494, 1499, 1525, 1624, 1687, 1846
CseI	GACGC	3 cut(s)	769, 1042, 1768
Csp6I	GTAC	6 cut(s)	1069, 1336, 1486, 1509, 1573, 1851
CspAI	ACCGGT	1 cut(s)	1539
CviAII	CATG	5 cut(s)	518, 753, 826, 1324, 1411
CviQI	GTAC	6 cut(s)	1069, 1336, 1486, 1509, 1573, 1851
DdeI	CTNAG	5 cut(s)	37, 58, 305, 1503, 1832
DpnI	GATC	5 cut(s)	529, 608, 1188, 1679, 1841
DpnII	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
DrdI	GACNNNNNNGTC	1 cut(s)	1052
DseDI	GACNNNNNNGTC	1 cut(s)	1052
EaeI	YGGCCR	3 cut(s)	154, 504, 1059
Eam1104I	CTCTTC	3 cut(s)	388, 951, 1253
EarI	CTCTTC	3 cut(s)	388, 951, 1253
EciI	GGCGGA	6 cut(s)	862, 913, 1081, 1673, 1802, 1852
Ecl136II	GAGCTC	1 cut(s)	613
Eco130I	CCWWGG	2 cut(s)	752, 1323
Eco147I	AGGCCT	2 cut(s)	1112, 1197
Eco24I	GRGCYC	3 cut(s)	243, 503, 615
Eco32I	GATATC	1 cut(s)	581
Eco47I	GGWCC	4 cut(s)	855, 1494, 1525, 1624
Eco53kI	GAGCTC	1 cut(s)	613
Eco72I	CACGTG	1 cut(s)	1856
Eco81I	CCTNAGG	1 cut(s)	1503
Eco88I	CYCGRG	2 cut(s)	602, 614
EcoICRI	GAGCTC	1 cut(s)	613
EcoRII	CCWGG	5 cut(s)	145, 476, 552, 989, 1029
EcoRV	GATATC	1 cut(s)	581
EcoT14I	CCWWGG	2 cut(s)	752, 1323
EcoT38I	GRGCYC	3 cut(s)	243, 503, 615
ErhI	CCWWGG	2 cut(s)	752, 1323
FaeI	CATG	5 cut(s)	521, 756, 829, 1327, 1414
FaqI	GGGAC	4 cut(s)	459, 635, 1205, 1649
FatI	CATG	5 cut(s)	517, 752, 825, 1323, 1410
FauI	CCCGC	2 cut(s)	945, 1004
FblI	GTMKAC	3 cut(s)	63, 1026, 1707
FokI	GGATG	5 cut(s)	322, 955, 1137, 1739, 1754
FriOI	GRGCYC	3 cut(s)	243, 503, 615
FspBI	CTAG	4 cut(s)	312, 318, 324, 531
GlaI	GCGC	3 cut(s)	914, 995, 1870
GsaI	CCCAGC	1 cut(s)	363
GsuI	CTGGAG	1 cut(s)	893
HaeII	RGCGCY	1 cut(s)	916
HgaI	GACGC	3 cut(s)	769, 1042, 1768
HhaI	GCGC	3 cut(s)	915, 996, 1871
Hin1I	GRCGYC	1 cut(s)	1469
Hin1II	CATG	5 cut(s)	521, 756, 829, 1327, 1414
Hin6I	GCGC	3 cut(s)	913, 994, 1869
HinP1I	GCGC	3 cut(s)	913, 994, 1869
HincII	GTYRAC	3 cut(s)	1554, 1708, 1750
HindII	GTYRAC	3 cut(s)	1554, 1708, 1750
HinfI	GANTC	3 cut(s)	635, 965, 1416
HphI	GGTGA	8 cut(s)	72, 135, 193, 268, 738, 940, 1306, 1600
Hpy166II	GTNNAC	9 cut(s)	64, 1027, 1369, 1554, 1573, 1624, 1708, 1750, 1853
Hpy188I	TCNGA	4 cut(s)	403, 700, 1614, 1719
Hpy188III	TCNNGA	6 cut(s)	584, 604, 632, 858, 1681, 1805
Hpy8I	GTNNAC	9 cut(s)	64, 1027, 1369, 1554, 1573, 1624, 1708, 1750, 1853
Hpy99I	CGWCG	9 cut(s)	13, 407, 785, 1010, 1058, 1471, 1474, 1477, 1784
HpyAV	CCTTC	6 cut(s)	142, 269, 1123, 1208, 1609, 1786
HpyCH4III	ACNGT	3 cut(s)	407, 524, 1802
HpyCH4IV	ACGT	8 cut(s)	1218, 1286, 1469, 1488, 1569, 1752, 1855, 1899
HpyCH4V	TGCA	9 cut(s)	185, 465, 486, 654, 1119, 1182, 1315, 1342, 1825
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 660, 684, 1002, 1182, 1260, 1444, 1766, 1901
HpyF3I	CTNAG	5 cut(s)	37, 58, 305, 1503, 1832
HpySE526I	ACGT	8 cut(s)	1218, 1286, 1469, 1488, 1569, 1752, 1855, 1899
Hsp92I	GRCGYC	1 cut(s)	1469
Hsp92II	CATG	5 cut(s)	521, 756, 829, 1327, 1414
HspAI	GCGC	3 cut(s)	913, 994, 1869
Kzo9I	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
LguI	GCTCTTC	2 cut(s)	951, 1253
LmnI	GCTCC	6 cut(s)	371, 446, 926, 1173, 1698, 1828
Lsp1109I	GCAGC	6 cut(s)	4, 477, 545, 549, 638, 1194
LweI	GCATC	1 cut(s)	1798
MaeI	CTAG	4 cut(s)	312, 318, 324, 531
MaeII	ACGT	8 cut(s)	1218, 1286, 1469, 1488, 1569, 1752, 1855, 1899
MaeIII	GTNAC	5 cut(s)	413, 808, 1517, 1565, 1735
MalI	GATC	5 cut(s)	529, 608, 1188, 1679, 1841
MbiI	CCGCTC	2 cut(s)	366, 921
MboI	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
MfeI	CAATTG	1 cut(s)	1143
MflI	RGATCY	2 cut(s)	527, 1677
MhlI	GDGCHC	4 cut(s)	243, 503, 615, 797
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	7 cut(s)	288, 460, 691, 713, 834, 980, 1143
MluNI	TGGCCA	1 cut(s)	156
MmeI	TCCRAC	4 cut(s)	426, 622, 723, 1575
Mox20I	TGGCCA	1 cut(s)	156
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	2 cut(s)	207, 291
MslI	CAYNNNNRTG	3 cut(s)	522, 751, 1328
Msp20I	TGGCCA	1 cut(s)	156
MunI	CAATTG	1 cut(s)	1143
Mva1269I	GAATGC	1 cut(s)	488
MvaI	CCWGG	5 cut(s)	147, 478, 554, 991, 1031
MvnI	CGCG	4 cut(s)	780, 1053, 1784, 1869
MwoI	GCNNNNNNNGC	9 cut(s)	10, 660, 684, 1002, 1182, 1260, 1444, 1766, 1901
NciI	CCSGG	6 cut(s)	503, 1460, 1498, 1515, 1529, 1712
NcoI	CCATGG	2 cut(s)	752, 1323
NdeII	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
NlaIII	CATG	5 cut(s)	521, 756, 829, 1327, 1414
NlaIV	GGNNCC	4 cut(s)	409, 1356, 1527, 1847
NmuCI	GTSAC	3 cut(s)	808, 1565, 1735
NspV	TTCGAA	1 cut(s)	1880
PaeR7I	CTCGAG	1 cut(s)	614
PaqCI	CACCTGC	1 cut(s)	1282
PasI	CCCWGGG	1 cut(s)	477
PceI	AGGCCT	2 cut(s)	1112, 1197
PciSI	GCTCTTC	2 cut(s)	951, 1253
PcsI	WCGNNNNNNNCGW	3 cut(s)	621, 1050, 1472
PctI	GAATGC	1 cut(s)	488
PfeI	GAWTC	3 cut(s)	635, 965, 1416
PflFI	GACNNNGTC	2 cut(s)	569, 1471
PfoI	TCCNGGA	1 cut(s)	1458
PinAI	ACCGGT	1 cut(s)	1539
PmaCI	CACGTG	1 cut(s)	1856
PmlI	CACGTG	1 cut(s)	1856
Ppu21I	YACGTR	1 cut(s)	1856
PshAI	GACNNNNGTC	1 cut(s)	1800
Psp124BI	GAGCTC	1 cut(s)	615
Psp6I	CCWGG	5 cut(s)	145, 476, 552, 989, 1029
PspCI	CACGTG	1 cut(s)	1856
PspFI	CCCAGC	1 cut(s)	359
PspGI	CCWGG	5 cut(s)	145, 476, 552, 989, 1029
PspN4I	GGNNCC	4 cut(s)	409, 1356, 1527, 1847
PspPI	GGNCC	9 cut(s)	855, 1033, 1253, 1494, 1499, 1525, 1624, 1687, 1846
PspXI	VCTCGAGB	1 cut(s)	614
PstI	CTGCAG	2 cut(s)	656, 1184
PstNI	CAGNNNCTG	1 cut(s)	1831
PsuI	RGATCY	2 cut(s)	527, 1677
PsyI	GACNNNGTC	2 cut(s)	569, 1471
RsaI	GTAC	6 cut(s)	1070, 1337, 1487, 1510, 1574, 1852
RsaNI	GTAC	6 cut(s)	1069, 1336, 1486, 1509, 1573, 1851
RseI	CAYNNNNRTG	3 cut(s)	522, 751, 1328
SacI	GAGCTC	1 cut(s)	615
SalI	GTCGAC	1 cut(s)	1706
SapI	GCTCTTC	2 cut(s)	951, 1253
SaqAI	TTAA	2 cut(s)	207, 291
Sau3AI	GATC	5 cut(s)	527, 606, 1186, 1677, 1839
Sau96I	GGNCC	9 cut(s)	855, 1033, 1253, 1494, 1499, 1525, 1624, 1687, 1846
ScaI	AGTACT	1 cut(s)	1337
SduI	GDGCHC	4 cut(s)	243, 503, 615, 797
SfaNI	GCATC	1 cut(s)	1798
SfcI	CTRYAG	2 cut(s)	652, 1180
Sfr274I	CTCGAG	1 cut(s)	614
SfuI	TTCGAA	1 cut(s)	1880
SinI	GGWCC	4 cut(s)	855, 1494, 1525, 1624
SlaI	CTCGAG	1 cut(s)	614
SmiMI	CAYNNNNRTG	3 cut(s)	522, 751, 1328
SmlI	CTYRAG	3 cut(s)	614, 630, 646
SmoI	CTYRAG	3 cut(s)	614, 630, 646
Sse9I	AATT	7 cut(s)	288, 460, 691, 713, 834, 980, 1143
SseBI	AGGCCT	2 cut(s)	1112, 1197
SspI	AATATT	1 cut(s)	1393
SspMI	CTAG	4 cut(s)	312, 318, 324, 531
SstI	GAGCTC	1 cut(s)	615
StuI	AGGCCT	2 cut(s)	1112, 1197
StyI	CCWWGG	2 cut(s)	752, 1323
TaaI	ACNGT	3 cut(s)	407, 524, 1802
TaiI	ACGT	8 cut(s)	1221, 1289, 1472, 1491, 1572, 1755, 1858, 1902
TaqII	GACCGA	1 cut(s)	787
TasI	AATT	7 cut(s)	288, 460, 691, 713, 834, 980, 1143
TatI	WGTACW	2 cut(s)	1335, 1572
TauI	GCSGC	9 cut(s)	366, 687, 878, 1053, 1097, 1100, 1760, 1787, 1869
TfiI	GAWTC	3 cut(s)	635, 965, 1416
Tru1I	TTAA	2 cut(s)	207, 291
Tru9I	TTAA	2 cut(s)	207, 291
TscAI	CASTG	1 cut(s)	813
TseFI	GTSAC	3 cut(s)	808, 1565, 1735
TseI	GCWGC	6 cut(s)	17, 465, 537, 558, 651, 1182
Tsp45I	GTSAC	3 cut(s)	808, 1565, 1735
TspGWI	ACGGA	2 cut(s)	1571, 1754
TspRI	CASTG	1 cut(s)	813
Tth111I	GACNNNGTC	2 cut(s)	569, 1471
VpaK11BI	GGWCC	4 cut(s)	855, 1494, 1525, 1624
XapI	RAATTY	1 cut(s)	980
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1681
XhoI	CTCGAG	1 cut(s)	614
XmiI	GTMKAC	3 cut(s)	63, 1026, 1707
XspI	CTAG	4 cut(s)	312, 318, 324, 531
ZraI	GACGTC	1 cut(s)	1470
ZrmI	AGTACT	1 cut(s)	1337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.