pycom16g09170

Regulator of G-protein signaling

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
6151431 .. 6151973
543 bp
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UTR
Exon/CDS
Intron
pycom16g09170.2

Sequence Viewer

Length: 261 bp
ATGGCAGCGTATGAGAAGGGAAGGGCGTCAGTAGGGGGAGGGGGACCTCTACCAAAATTTGGGGAGTGGGACGTGAACGATCCGGCATCGGCTGAAGGATTTACAGTCATATTCAACAAGGCCAGAGACGACAGAAAGTCTGGTGGAACTCCATTGATTAATGTTGCAGCAGCACCAGAAAAATATGCTTCCCGTAAAAAAAGTGACAAATATAATAATCACCCCAAAAAGGTAATAATAATTATTAATATCCATGCCTAA

Protein Analysis

87

Amino Acids

9.25

Weight (kDa)

9.65

Isoelectric Point (pI)

30.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018712)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g24970
malus_domestica MD13G1107600.v1.1
prunus_persica Prupe.1G238800_v2.0.a1
pyrus_communis pycom16g09170
rosa_multiflora Rmu_sc0004965.1_g000022
rosa_roxburghii Rroxscaffold_5G00373580
rosa_rugosa Rorug04G0254300
rosa_samantha Rh4CG334300
rosa_wichuraiana Rw4G027090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 59
AclWI GGATC 1 cut(s) 74
AcsI RAATTY 1 cut(s) 56
AcuI CTGAAG 1 cut(s) 114
AcyI GRCGYC 1 cut(s) 26
AfiI CCNNNNNNNGG 2 cut(s) 59, 229
AgsI TTSAA 1 cut(s) 115
AhdI GACNNNNNGTC 1 cut(s) 136
AjiI CACGTC 1 cut(s) 73
Alw26I GTCTC 1 cut(s) 120
AlwI GGATC 1 cut(s) 74
AoxI GGCC 1 cut(s) 120
ApeKI GCWGC 3 cut(s) 5, 167, 170
ApoI RAATTY 1 cut(s) 56
AseI ATTAAT 2 cut(s) 159, 246
AspS9I GGNCC 1 cut(s) 44
AsuHPI GGTGA 1 cut(s) 212
AvaII GGWCC 1 cut(s) 44
BbvI GCAGC 3 cut(s) 17, 179, 182
BcoDI GTCTC 1 cut(s) 120
BisI GCNGC 3 cut(s) 6, 168, 171
BlsI GCNGC 3 cut(s) 7, 169, 172
Bme18I GGWCC 1 cut(s) 44
BmeRI GACNNNNNGTC 1 cut(s) 136
BmgBI CACGTC 1 cut(s) 73
BmgT120I GGNCC 1 cut(s) 44
BmiI GGNNCC 1 cut(s) 45
BmsI GCATC 1 cut(s) 95
BsaHI GRCGYC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 229
BseLI CCNNNNNNNGG 2 cut(s) 59, 229
BseXI GCAGC 3 cut(s) 17, 179, 182
BshFI GGCC 1 cut(s) 122
BsiSI CCGG 1 cut(s) 83
BslFI GGGAC 2 cut(s) 57, 83
BslI CCNNNNNNNGG 2 cut(s) 59, 229
BsmAI GTCTC 1 cut(s) 120
BsmBI CGTCTC 1 cut(s) 120
BsmFI GGGAC 2 cut(s) 57, 83
BsnI GGCC 1 cut(s) 122
Bsp143I GATC 1 cut(s) 79
BspANI GGCC 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 45
BspPI GGATC 1 cut(s) 74
BssMI GATC 1 cut(s) 79
BssNI GRCGYC 1 cut(s) 26
Bst4CI ACNGT 1 cut(s) 106
BstACI GRCGYC 1 cut(s) 26
BstKTI GATC 1 cut(s) 82
BstMAI GTCTC 1 cut(s) 120
BstMBI GATC 1 cut(s) 79
BstV1I GCAGC 3 cut(s) 17, 179, 182
BsuRI GGCC 1 cut(s) 122
BtrI CACGTC 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 44
CseI GACGC 1 cut(s) 15
CviAII CATG 1 cut(s) 254
CviJI RGCY 2 cut(s) 92, 122
CviKI_1 RGCY 2 cut(s) 92, 122
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
DriI GACNNNNNGTC 1 cut(s) 136
Eam1105I GACNNNNNGTC 1 cut(s) 136
Eco47I GGWCC 1 cut(s) 44
Eco57I CTGAAG 1 cut(s) 114
EcoO109I RGGNCCY 1 cut(s) 44
Esp3I CGTCTC 1 cut(s) 120
FaeI CATG 1 cut(s) 257
FaiI YATR 5 cut(s) 12, 110, 186, 213, 255
FaqI GGGAC 2 cut(s) 57, 83
FatI CATG 1 cut(s) 253
Fnu4HI GCNGC 3 cut(s) 6, 168, 171
Fsp4HI GCNGC 3 cut(s) 6, 168, 171
GluI GCNGC 3 cut(s) 6, 168, 171
HaeIII GGCC 1 cut(s) 122
HapII CCGG 1 cut(s) 83
HgaI GACGC 1 cut(s) 15
Hin1I GRCGYC 1 cut(s) 26
Hin1II CATG 1 cut(s) 257
HpaII CCGG 1 cut(s) 83
HphI GGTGA 1 cut(s) 212
Hpy166II GTNNAC 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 76
HpyAV CCTTC 3 cut(s) 10, 15, 89
HpyCH4III ACNGT 1 cut(s) 106
HpyCH4IV ACGT 1 cut(s) 72
HpyCH4V TGCA 1 cut(s) 167
HpySE526I ACGT 1 cut(s) 72
Hsp92I GRCGYC 1 cut(s) 26
Hsp92II CATG 1 cut(s) 257
Kzo9I GATC 1 cut(s) 79
LpnPI CCDG 4 cut(s) 96, 126, 136, 189
Lsp1109I GCAGC 3 cut(s) 17, 179, 182
LweI GCATC 1 cut(s) 95
MaeII ACGT 1 cut(s) 72
MaeIII GTNAC 1 cut(s) 203
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MluCI AATT 2 cut(s) 56, 240
MnlI CCTC 2 cut(s) 32, 57
MseI TTAA 2 cut(s) 159, 246
MspI CCGG 1 cut(s) 83
NdeII GATC 1 cut(s) 79
NlaIII CATG 1 cut(s) 257
NlaIV GGNNCC 1 cut(s) 45
NmuCI GTSAC 1 cut(s) 203
PflMI CCANNNNNTGG 1 cut(s) 59
PkrI GCNGC 3 cut(s) 7, 169, 172
PpuMI RGGWCCY 1 cut(s) 44
PshBI ATTAAT 2 cut(s) 159, 246
Psp5II RGGWCCY 1 cut(s) 44
PspN4I GGNNCC 1 cut(s) 45
PspPI GGNCC 1 cut(s) 44
PspPPI RGGWCCY 1 cut(s) 44
SaqAI TTAA 2 cut(s) 159, 246
SatI GCNGC 3 cut(s) 6, 168, 171
Sau3AI GATC 1 cut(s) 79
Sau96I GGNCC 1 cut(s) 44
SetI ASST 3 cut(s) 49, 75, 234
SfaNI GCATC 1 cut(s) 95
SgeI CNNG 7 cut(s) 85, 95, 130, 135, 153, 188, 204
SinI GGWCC 1 cut(s) 44
Sse9I AATT 2 cut(s) 56, 240
TaaI ACNGT 1 cut(s) 106
TaiI ACGT 1 cut(s) 75
TasI AATT 2 cut(s) 56, 240
Tru1I TTAA 2 cut(s) 159, 246
Tru9I TTAA 2 cut(s) 159, 246
TseFI GTSAC 1 cut(s) 203
TseI GCWGC 3 cut(s) 5, 167, 170
Tsp45I GTSAC 1 cut(s) 203
Van91I CCANNNNNTGG 1 cut(s) 59
VpaK11BI GGWCC 1 cut(s) 44
VspI ATTAAT 2 cut(s) 159, 246
XapI RAATTY 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.