pycom17g04520

Putative death-receptor fusion protein (DUF2428)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
3081130 .. 3086615
5486 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 5043 bp
ATGTCCTCCAAATGGCGTGCAATCCAGCACCGCCACCGCTACACCTACAACACCGTCGTATTCCCCGCCACCTACATCGATTCCCTGAATTCCCTCCCGCCGCAAATCGCCACCTCAAAGTTCTTCTCCCTCCTCAAAGAGCTAGTCTCTCTGAACTCCACCTACTCCCAGCTCAACCACACCAAGGGCCTCGCCGCTGCTTTCGGCGACGTACTCGCCTGTGGGGACGAAGCTCTGGTCTCCGAAGCGGCGCCGTTTTACTTGGAGCTTCTGTTTCTGGAAAATTCATTGCCTCTGCATAAAACTCTCGTCTCTGTTTTGGCAAAGGCGCGAACTTTCCAGCCTCTGATCCGGCGGTGCTATCGGAAGCTATGCGAAGACTACGGCGGCGGCAGGGGGAAGCGGTTCTGTGTGTCCCGGTCGGCCTTATCGGTAATGGGTATGCCAAAGTTGGGGTTTTTGGTTGAAATTGTGGAAGAATGCGCCGTTTTAATTGCATCCGATACGGTTTCGAGCTTGGATGCTCTGATTTCGGAGACGAAAGCGTACTCTCGGCCTTCTCCGATCGTTATGGAGCAATGCCAGGAGGCTCTGTCTTGTTTGTATTATCTGCTTCAGCGCTTCCCTTCGAAATTCGAGGAGTTTAATGGTGGTTCTGATAATGATGGTCGATTGAATGTGTTGGAGATGAGTGTGACTGTCGTTTTGAGCGTCCTGAAGTCGGTGGCGTTTTCGAGAGATTGTTATGTGGCTGCTGGAGTGAGCTTCTGTGCAGCTCTGCAAGTGTGTCTCGGCCCCGAAGAGCTCGGCTTGTTTATAATTGAAGGTATTTTTCACCCAACTGATTGTATTAGTAGTTTAGATGCTAATGCTGATAGTGAAAGGAGGAATGTCATTGCCAAACTTCCTTATAAAGGGGATATGTACACCGAAATTCGTAGTTTATCTGACATGAGTAGACTTTGCTTGATACGGGGGATTCTTACTGCGGTTTCGAGGGCAGTGCTTAATACCCATTTTGATGTGTCAAAGGGTAGTTCGAATGGCTACAAGAGTCATACGAGTGGTGGCAACTGCGTTAAGACTATACTGTATGATGGAATTTTGCCTGAGTTATGTAACTACTGCGAGAACCCTACCGATAGCCATTTTAACTTTCATGCGTTGACTGTGTTGCAGATGTGTTTGCAACAAATAAAAACTTCAATGTTAGCTAGTCTTACCATCACATCCAAGGATTATGATCCGATCCCAGTGGAGATGGGAACCCGGATATTGAGGATCATATGGAATAATTTGGAAGATCCTTTGAGTCAAACAGTCAAACAAGTTCATCTCATTTTTGATCTCTTCCTAGACATTCGATCCACTCTTCGCTGGTCAGAAGGTAGTGAGAGAATAAGGTCATTCTTGCAAAGCATTGCTTCAGATCTTCTTCGTCTGGGTCCTCGCTGCAAGGGAAGATATGTTCCTTTGGGTTCACTGACAAAGAGATTGGGTGCAAAAACTATGTTGGATATGAGTCCTGGCTTGCTGTTTCAGACTGCACATGCGTACATTGATGATGATGTGTGCTGTGCACTCACGTCGTTTTTGAAGATTTTACTTGAGGACTTGCGTAACGAGTGTTGGAGAAGTGATGGTATTGAAGGTGGTTATGTGCTTTATAGGGGGCATTGTCTGCCTCCATTTTTGTCTGGACTTGCTTCTGGGGTTTCAAAGCTCCGCTCTAATTTGAACACTTATGCTCTGCCAATTTTACTTGAAGTGGACGAGGACAGTATATTTGCTATGCTTGCTTTTATTTCAGTTGGTTTGAGCAAGGGTGAAAGTCAACTGTTATGTCCTGAGCTCTATCATGGAAACATGGAACTGAGAGTTGAACAGAAAGTGGCCATCTTAGTTTCACTGCTGAAGGTATCTCGTTTACTTGCATTGCTTGAAGGGGACATTGATTACGCAGCACATGAAAATTTTGGTGAACTAGAAACAAATTTCCCCGACCGACATGCTCTTGTTTCTATCAAGGGGATAAAGGTTGAAGTTTGTGTTGAGTGGCTAGTACTGGCATTGACCCATGTTGATGATTCATTACGCGTGGATGCTGCAGAGACACTTTTCTTGAATCCCAAGACAGCTAGTTTACCTTCCCATTTAGAGCTCATGTTATTAAAGGAAGCAGTGCCATTGAACATGAGGTGTTGCTCTACAGCTTTCCAAATGAAGTGGAGTAGCTTGTTCAGAAAGTTTTTTGCTCGGGTCCGAACAGCCTTGGAGAGACAATTTAAGCAGGGACGCTGGCAACCCCTGGAGCATAGTAACAGCAATGGAATGCATCCTTCAAATGGAAGTGAACATACTGAAGCAAACAGAGCAAGCGATCTTTTTTATTTCATGAGGTGGTTAAGTTCATTTCTGTTTTTCTCTTGCTATCCGTCTGCACCTTATAAGAGAAAAATAATGGCAATGGAGCTCATTCTAATAATGCTCAATGTTTGGTCCATTGTGCCTGCTACTCAAGAAAAAAATGGTTCTTTATGTGTGGAAGACCGGCTCTATCCGTATAATAAAGGAATGACCTCACCTGATTCAACTTTGTTGTTAGTGGGATCCATAATTGATAGCTGGGACAAGCTGAGAGAGAATTCTTTTCGCATCTTGTTACATTTTCCAACCCCACTTCCTGGAATTTCAGATGAAGGTATGGTCAAGAATGTGATTTTATGGGCTAAGAAATTAGTTTGCAGTCCACGAGTGAGAGAAACTGATGCTGGAGCTCTGACCTTAAGGCTGATTTTCAGGAAGTATGTCTTACAGCTAGGATGGACTGTTCAAGCTTCAGTTAATGTAGCTTGTCTTCGTACAGAGTCTGCCATGGAAAACGGAGATAATCAAACTTATAATACTGGATATCCCGTGATGGAATATGTTAGGTCACTAATTGATTGGTTGGATGTTTCCATAGAGGAAGGGGAGAAGGATCGATCTGAAGCTTGTCGGAACAGCTTTGTTCACGGGGTATTACTCACTCTACGATATGCTTTTGAGGAATTGGACTTCAACTCTGACATAGCACAGTCTAGTATCTCAGAGATGAGACATTCACTAGAGAAGCTCTTGGAGCTTGTAATGCGAATAACTTCTTTGGCACTTTGGGTGGTTTCTGCAGATGCTTGGCATCTCCCTGAGGACATGGATGAAGTGGTTGATGATGATGATTCTTTCTTATCAGAGGTTCCAGATGAGGTGGAGGTTAAAACATCTCAGTTGGAGGATGAAGACAAAAACTACAAACTTGTCCAGAGTAACAGGCGATCAGAACAAAGTGTAATGGTTGGCTGTTGGCTTGCGATGAAAGAGGTGAGTCTTCTTTTGGGAACTATCACAAGAAAGATTCCTTTACCAAGTAGCCCTTCCTCAGAATTATTAGATTCAGAAGCCACTTCTTCTTGTGCTTCTGATGCTTCAGTTTTGATGGCTTCCGATGCAATGCTTGATTTGAAACAACTTGAACGAATTGGGAATCACTTCTTGGAGGTCCTTTTGAAGATGAAGCACAACGGTGCAATTGATAAAACAAGGGCCGGATTTACAGCTCTTTGCAACCGTTTACTTTGTTCAAATGATCCCCGACTTTGCAAGTTAACAGAAACCTGGATGGAGCAGCTTATGGACAGAACCGTGGCCAAGGGTCAAACAGTGGATGACTTGTTAAGGAGAAGTGCAGGTATTCCTGCTGCGTTTATAGCACTGTTCCTCTCAGAGCCAGAAGGTGCACCTAAGAAACTTCTCCCACGGGCTCTACGGTGGCTCTTAGATGTTGCTAATGCATCTATTGTGGGTCTGGTTGAAACCATCAGCTCTAATGGCGACATGGGTAAATTGCCCTCTATAAAGTCGGGCAAAGTTTTTGAGTCTGTGGTGCCGTCAGATATAGATATTAGCGACAAGGTTTCAAAGATCGGTGATGAGGGTGTCATTCCTACTGTACATGCATTCAATGTCCTCAGAGCCGCCTTCAATGATACCAACCTGGCTGCTGACACCTCAGGTTTTTCTGCTGAGGCTATGATTGTTTCAATTTGCTCCTTTTCTTCTCCCCACTGGGAGGTTCGGAACAGTGCTTGTCAGGCATACACTGCTTTGGTACGTCGGATGATTGGATTCCTTAATGTCCAAAAACGAGAGTCGTCAAGACGTGCACTAACTGGGGTTGAATTTTTTCATCGGTATCCCTTATTGCATCCATTTCTATTCAAGGAACTGAAAGTTGCGACAGTGTTGCTTGCGGATGGGATATCTGGACAATCTGAATCCAACCTAGAAAATGCTGTGCACCCAAGCTTGTGCCCCGTCTTGATTCTGTTATCCAGGCTGAAGCCATCAACAATCGCAAGTGAGACTGGAGATGACGTGGATCCTTTTTTGTTAATGCCCTTCATTAGAAAGTGCTCTACCCAAAGCAATCTAAGAGTCCGTGTTCTTGCATCTAGAGCTTTAACAGGCCTTGTATCTAATGAGAAGCTGCCAAGTGTTCTCCTCAATATAGTATCCGAGTTGCCCAGAATAGATGACCAAGCTGCACTGACTCCCGAATCGTCCCTATTAGTTCACAAAACTGAAAGAAGACACCATAGTTCATATAATTGGATCCATGGAATTCTACTGCAGTTGAGTTCTCTCCTGGATACAAACTGTAGAAATCTGGCTGATTCCTCAAAGAAAGATCAGATTCTTGGTGATTTGTTTCAAGCTCTTTTAGCGCATTCATGGATTGGAAAGCCCAGATTGTGCCCTTGTCCAATCCTCAATGCTTCTTTCCTAAAGTTACTGGATCACATGCTCAGTATTGCAAGGACGTGCCATACTAGCAAAAAAATTTATGCTCTTCGCAACCTAATTTTGGAGTTATCTACAGAATGCTTAGATGTAAAGGTTTCTAACGGGCATTCGTATTATCGATCCAACCATGGCAGAACTCCGACAACAAGCAGCAGTCTCCTATTTCAGTTGCGTGTTTCAAGCATCAGAGAAAATGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1681

Amino Acids

187.41

Weight (kDa)

6.28

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_Trm732 PF25150 563 - 881 3.4e-16 Trm732, TPR repeats
DUF2428 PF10350 1036 - 1370 6.6e-72 THADA/TRM732, DUF2428
TPR_Trm732_C PF25151 1372 - 1560 7.7e-29 Trm732, C-terminal TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 818, 912, 2448, 2901
Acc36I ACCTGC 1 cut(s) 3716
AccB1I GGYRCC 2 cut(s) 250, 3922
AccB7I CCANNNNNTGG 1 cut(s) 2684
AccBSI CCGCTC 1 cut(s) 1728
AccI GTMKAC 1 cut(s) 958
AccII CGCG 2 cut(s) 331, 2097
AcoI YGGCCR 2 cut(s) 1893, 3684
AcuI CTGAAG 9 cut(s) 599, 737, 1410, 1934, 2382, 2823, 3009, 3450, 4397
AcyI GRCGYC 1 cut(s) 251
AfaI GTAC 8 cut(s) 213, 548, 926, 1556, 2064, 2863, 3990, 4149
AfeI AGCGCT 1 cut(s) 620
AfiI CCNNNNNNNGG 9 cut(s) 12, 184, 452, 721, 914, 2345, 2684, 4108, 4903
AflII CTTAAG 1 cut(s) 2785
AflIII ACRYGT 1 cut(s) 2095
AjiI CACGTC 4 cut(s) 1587, 4199, 4414, 4860
AjnI CCWGG 8 cut(s) 582, 1525, 2307, 2683, 3653, 4032, 4370, 4683
AjuI GAANNNNNNNTTGG 4 cut(s) 3397, 3429, 3515, 3547
AleI CACNNNNGTG 1 cut(s) 3561
AloI GAACNNNNNNTCC 4 cut(s) 1452, 1484, 2814, 2846
Alw44I GTGCAC 4 cut(s) 1578, 3774, 4200, 4334
AlwNI CAGNNNCTG 2 cut(s) 346, 2870
Ama87I CYCGRG 1 cut(s) 2256
Aor51HI AGCGCT 1 cut(s) 620
AoxI GGCC 8 cut(s) 187, 423, 554, 793, 1893, 3582, 3684, 4504
ApaLI GTGCAC 4 cut(s) 1578, 3774, 4200, 4334
ArsI GACNNNNNNTTYG 8 cut(s) 129, 161, 222, 254, 688, 720, 1769, 1801
Asp700I GAANNNNTTC 4 cut(s) 404, 3139, 3527, 4221
AspLEI GCGC 5 cut(s) 253, 331, 485, 621, 4765
AspS9I GGNCC 7 cut(s) 187, 794, 1445, 2260, 2499, 3538, 3582
AsuC2I CCSGG 2 cut(s) 418, 1270
AsuHPI GGTGA 7 cut(s) 827, 1838, 1991, 2574, 3373, 3977, 4751
AsuII TTCGAA 2 cut(s) 629, 1040
AvaI CYCGRG 1 cut(s) 2256
AvaII GGWCC 4 cut(s) 1445, 2260, 2499, 3538
AxyI CCTNAGG 2 cut(s) 3186, 4048
BaeGI GKGCMC 6 cut(s) 1582, 3778, 4204, 4338, 4352, 4796
BalI TGGCCA 2 cut(s) 1895, 3686
BamHI GGATCC 3 cut(s) 2609, 4417, 4650
BanI GGYRCC 2 cut(s) 250, 3922
BanII GRGCYC 6 cut(s) 807, 1854, 2163, 2475, 2779, 3802
BarI GAAGNNNNNNTAC 4 cut(s) 2341, 2373, 2841, 2873
BauI CACGAG 1 cut(s) 2751
BbsI GAAGAC 6 cut(s) 384, 2553, 2849, 3285, 3359, 4633
BbvCI CCTCAGC 1 cut(s) 4062
BceAI ACGGC 4 cut(s) 238, 400, 470, 3910
BcgI CGANNNNNNTGC 8 cut(s) 985, 1019, 1569, 1603, 1991, 2025, 4264, 4298
BciT130I CCWGG 8 cut(s) 584, 1527, 2309, 2685, 3655, 4034, 4372, 4685
BciVI GTATCC 3 cut(s) 4242, 4561, 4681
BcnI CCSGG 2 cut(s) 418, 1270
BfmI CTRYAG 6 cut(s) 2106, 2208, 3165, 4667, 4696, 4914
BfoI RGCGCY 2 cut(s) 254, 622
BfrI CTTAAG 1 cut(s) 2785
BfuAI ACCTGC 1 cut(s) 3716
BfuI GTATCC 3 cut(s) 4242, 4561, 4681
BglII AGATCT 1 cut(s) 1429
BmcAI AGTACT 1 cut(s) 2064
Bme18I GGWCC 4 cut(s) 1445, 2260, 2499, 3538
BmeT110I CYCGRG 1 cut(s) 2256
BmgBI CACGTC 4 cut(s) 1587, 4199, 4414, 4860
BmgT120I GGNCC 7 cut(s) 187, 794, 1445, 2260, 2499, 3538, 3582
BmrI ACTGGG 3 cut(s) 1247, 4114, 4218
BmuI ACTGGG 3 cut(s) 1247, 4114, 4218
BpiI GAAGAC 6 cut(s) 384, 2553, 2849, 3285, 3359, 4633
BplI GAGNNNNNCTC 2 cut(s) 131, 163
BpmI CTGGAG 4 cut(s) 777, 2330, 2793, 4425
Bpu10I CCTNAGC 2 cut(s) 1848, 4062
Bpu14I TTCGAA 2 cut(s) 629, 1040
BpuEI CTTGAG 2 cut(s) 1628, 2502
BpuMI CCSGG 2 cut(s) 418, 1270
Bsa29I ATCGAT 3 cut(s) 78, 2983, 4960
BsaBI GATNNNNATC 1 cut(s) 1242
BsaHI GRCGYC 1 cut(s) 251
BsaI GGTCTC 1 cut(s) 244
BsaXI ACNNNNNCTCC 6 cut(s) 257, 287, 578, 608, 4398, 4428
Bsc4I CCNNNNNNNGG 9 cut(s) 12, 184, 452, 721, 914, 2345, 2684, 4108, 4903
Bse118I RCCGGY 1 cut(s) 2550
Bse1I ACTGG 7 cut(s) 1253, 2070, 2911, 4109, 4213, 4408, 4836
Bse21I CCTNAGG 2 cut(s) 3186, 4048
Bse3DI GCAATG 8 cut(s) 287, 584, 894, 1419, 1934, 2332, 2472, 3495
Bse8I GATNNNNATC 1 cut(s) 1242
BseBI CCWGG 8 cut(s) 584, 1527, 2309, 2685, 3655, 4034, 4372, 4685
BseCI ATCGAT 3 cut(s) 78, 2983, 4960
BseJI GATNNNNATC 1 cut(s) 1242
BseLI CCNNNNNNNGG 9 cut(s) 12, 184, 452, 721, 914, 2345, 2684, 4108, 4903
BseMI GCAATG 8 cut(s) 287, 584, 894, 1419, 1934, 2332, 2472, 3495
BseNI ACTGG 7 cut(s) 1253, 2070, 2911, 4109, 4213, 4408, 4836
BseRI GAGGAG 3 cut(s) 122, 653, 4529
BseSI GKGCMC 6 cut(s) 1582, 3778, 4204, 4338, 4352, 4796
BseYI CCCAGC 2 cut(s) 168, 2625
BsgI GTGCAG 5 cut(s) 792, 1530, 2424, 3744, 4566
Bsh1236I CGCG 2 cut(s) 331, 2097
Bsh1285I CGRYCG 3 cut(s) 422, 567, 2005
BshFI GGCC 8 cut(s) 189, 425, 556, 795, 1895, 3584, 3686, 4506
BshNI GGYRCC 2 cut(s) 250, 3922
BshVI ATCGAT 3 cut(s) 78, 2983, 4960
BsiEI CGRYCG 3 cut(s) 422, 567, 2005
BsiHKCI CYCGRG 1 cut(s) 2256
BsiSI CCGG 5 cut(s) 352, 418, 1270, 2551, 3585
BslFI GGGAC 6 cut(s) 239, 400, 1961, 2307, 2642, 4585
BslI CCNNNNNNNGG 9 cut(s) 12, 184, 452, 721, 914, 2345, 2684, 4108, 4903
BsmBI CGTCTC 2 cut(s) 316, 530
BsmFI GGGAC 6 cut(s) 239, 400, 1961, 2307, 2642, 4585
BsmI GAATGC 6 cut(s) 485, 2337, 3995, 4765, 4925, 4948
BsnI GGCC 8 cut(s) 189, 425, 556, 795, 1895, 3584, 3686, 4506
Bso31I GGTCTC 1 cut(s) 244
BsoBI CYCGRG 1 cut(s) 2256
Bsp119I TTCGAA 2 cut(s) 629, 1040
Bsp1407I TGTACA 2 cut(s) 924, 3988
Bsp19I CCATGG 3 cut(s) 2874, 4654, 4969
BspANI GGCC 8 cut(s) 189, 425, 556, 795, 1895, 3584, 3686, 4506
BspDI ATCGAT 3 cut(s) 78, 2983, 4960
BspFNI CGCG 2 cut(s) 331, 2097
BspHI TCATGA 1 cut(s) 2394
BspMAI CTGCAG 3 cut(s) 2110, 3169, 4671
BspMI ACCTGC 1 cut(s) 3716
BspQI GCTCTTC 2 cut(s) 795, 4893
BspT104I TTCGAA 2 cut(s) 629, 1040
BspT107I GGYRCC 2 cut(s) 250, 3922
BspTI CTTAAG 1 cut(s) 2785
BspTNI GGTCTC 1 cut(s) 244
BsrBI CCGCTC 1 cut(s) 1728
BsrDI GCAATG 8 cut(s) 287, 584, 894, 1419, 1934, 2332, 2472, 3495
BsrFI RCCGGY 1 cut(s) 2550
BsrGI TGTACA 2 cut(s) 924, 3988
BsrI ACTGG 7 cut(s) 1253, 2070, 2911, 4109, 4213, 4408, 4836
BssAI RCCGGY 1 cut(s) 2550
BssNI GRCGYC 1 cut(s) 251
BssSI CACGAG 1 cut(s) 2751
BssT1I CCWWGG 7 cut(s) 183, 1233, 2271, 2874, 3687, 4654, 4969
Bst2BI CACGAG 1 cut(s) 2751
Bst2UI CCWGG 8 cut(s) 584, 1527, 2309, 2685, 3655, 4034, 4372, 4685
Bst6I CTCTTC 4 cut(s) 795, 1355, 1377, 4893
BstACI GRCGYC 1 cut(s) 251
BstAFI CTTAAG 1 cut(s) 2785
BstAPI GCANNNNNTGC 2 cut(s) 1681, 4139
BstAUI TGTACA 2 cut(s) 924, 3988
BstBI TTCGAA 2 cut(s) 629, 1040
BstC8I GCNNGC 8 cut(s) 18, 1532, 1797, 2300, 2377, 2511, 3348, 4287
BstDSI CCRYGG 5 cut(s) 2874, 3681, 3794, 4654, 4969
BstENI CCTNNNNNAGG 1 cut(s) 912
BstFNI CGCG 2 cut(s) 331, 2097
BstH2I RGCGCY 2 cut(s) 254, 622
BstHHI GCGC 5 cut(s) 253, 331, 485, 621, 4765
BstMCI CGRYCG 3 cut(s) 422, 567, 2005
BstNI CCWGG 8 cut(s) 584, 1527, 2309, 2685, 3655, 4034, 4372, 4685
BstNSI RCATGY 4 cut(s) 1553, 2012, 3995, 4843
BstSFI CTRYAG 6 cut(s) 2106, 2208, 3165, 4667, 4696, 4914
BstSLI GKGCMC 6 cut(s) 1582, 3778, 4204, 4338, 4352, 4796
BstUI CGCG 2 cut(s) 331, 2097
BstV2I GAAGAC 6 cut(s) 384, 2553, 2849, 3285, 3359, 4633
BstX2I RGATCY 5 cut(s) 1303, 1429, 2609, 4417, 4650
BstYI RGATCY 5 cut(s) 1303, 1429, 2609, 4417, 4650
Bsu15I ATCGAT 3 cut(s) 78, 2983, 4960
Bsu36I CCTNAGG 2 cut(s) 3186, 4048
BsuI GTATCC 3 cut(s) 4242, 4561, 4681
BsuRI GGCC 8 cut(s) 189, 425, 556, 795, 1895, 3584, 3686, 4506
BsuTUI ATCGAT 3 cut(s) 78, 2983, 4960
BtgI CCRYGG 5 cut(s) 2874, 3681, 3794, 4654, 4969
BtgZI GCGATG 1 cut(s) 3365
BtrI CACGTC 4 cut(s) 1587, 4199, 4414, 4860
BtsI GCAGTG 4 cut(s) 1008, 1907, 2187, 4137
BveI ACCTGC 1 cut(s) 3716
Cac8I GCNNGC 8 cut(s) 18, 1532, 1797, 2300, 2377, 2511, 3348, 4287
CaiI CAGNNNCTG 2 cut(s) 346, 2870
CciI TCATGA 1 cut(s) 2394
CfoI GCGC 5 cut(s) 253, 331, 485, 621, 4765
Cfr10I RCCGGY 1 cut(s) 2550
Cfr13I GGNCC 7 cut(s) 187, 794, 1445, 2260, 2499, 3538, 3582
ClaI ATCGAT 3 cut(s) 78, 2983, 4960
CseI GACGC 2 cut(s) 700, 2304
Csp6I GTAC 8 cut(s) 212, 547, 925, 1555, 2063, 2862, 3989, 4148
CspCI CAANNNNNGTGG 2 cut(s) 2207, 2242
CviQI GTAC 8 cut(s) 212, 547, 925, 1555, 2063, 2862, 3989, 4148
DinI GGCGCC 1 cut(s) 252
EaeI YGGCCR 2 cut(s) 1893, 3684
Eam1104I CTCTTC 4 cut(s) 795, 1355, 1377, 4893
EarI CTCTTC 4 cut(s) 795, 1355, 1377, 4893
Ecl136II GAGCTC 5 cut(s) 805, 1852, 2161, 2473, 2777
Eco130I CCWWGG 7 cut(s) 183, 1233, 2271, 2874, 3687, 4654, 4969
Eco147I AGGCCT 1 cut(s) 4506
Eco24I GRGCYC 6 cut(s) 807, 1854, 2163, 2475, 2779, 3802
Eco31I GGTCTC 1 cut(s) 244
Eco32I GATATC 2 cut(s) 2912, 4299
Eco47I GGWCC 4 cut(s) 1445, 2260, 2499, 3538
Eco47III AGCGCT 1 cut(s) 620
Eco53kI GAGCTC 5 cut(s) 805, 1852, 2161, 2473, 2777
Eco57I CTGAAG 9 cut(s) 599, 737, 1410, 1934, 2382, 2823, 3009, 3450, 4397
Eco81I CCTNAGG 2 cut(s) 3186, 4048
Eco88I CYCGRG 1 cut(s) 2256
EcoICRI GAGCTC 5 cut(s) 805, 1852, 2161, 2473, 2777
EcoNI CCTNNNNNAGG 1 cut(s) 912
EcoO109I RGGNCCY 3 cut(s) 187, 1445, 3538
EcoRI GAATTC 3 cut(s) 88, 2644, 4659
EcoRII CCWGG 8 cut(s) 582, 1525, 2307, 2683, 3653, 4032, 4370, 4683
EcoRV GATATC 2 cut(s) 2912, 4299
EcoT14I CCWWGG 7 cut(s) 183, 1233, 2271, 2874, 3687, 4654, 4969
EcoT22I ATGCAT 3 cut(s) 2337, 3832, 3997
EcoT38I GRGCYC 6 cut(s) 807, 1854, 2163, 2475, 2779, 3802
EgeI GGCGCC 1 cut(s) 252
EheI GGCGCC 1 cut(s) 252
ErhI CCWWGG 7 cut(s) 183, 1233, 2271, 2874, 3687, 4654, 4969
Esp3I CGTCTC 2 cut(s) 316, 530
FalI AAGNNNNNCTT 6 cut(s) 1408, 1440, 2795, 2827, 3397, 3429
FaqI GGGAC 6 cut(s) 239, 400, 1961, 2307, 2642, 4585
FauI CCCGC 2 cut(s) 73, 105
FauNDI CATATG 1 cut(s) 1286
FblI GTMKAC 1 cut(s) 958
FriOI GRGCYC 6 cut(s) 807, 1854, 2163, 2475, 2779, 3802
GlaI GCGC 5 cut(s) 252, 330, 484, 620, 4764
GsaI CCCAGC 2 cut(s) 172, 2629
GsuI CTGGAG 4 cut(s) 777, 2330, 2793, 4425
HaeII RGCGCY 2 cut(s) 254, 622
HaeIII GGCC 8 cut(s) 189, 425, 556, 795, 1895, 3584, 3686, 4506
HapII CCGG 5 cut(s) 352, 418, 1270, 2551, 3585
HgaI GACGC 2 cut(s) 700, 2304
HhaI GCGC 5 cut(s) 253, 331, 485, 621, 4765
Hin1I GRCGYC 1 cut(s) 251
Hin6I GCGC 5 cut(s) 251, 329, 483, 619, 4763
HinP1I GCGC 5 cut(s) 251, 329, 483, 619, 4763
HincII GTYRAC 3 cut(s) 1167, 1835, 3645
HindII GTYRAC 3 cut(s) 1167, 1835, 3645
HindIII AAGCTT 3 cut(s) 2835, 2991, 4342
HpaI GTTAAC 1 cut(s) 3645
HpaII CCGG 5 cut(s) 352, 418, 1270, 2551, 3585
HphI GGTGA 7 cut(s) 827, 1838, 1991, 2574, 3373, 3977, 4751
Hpy99I CGWCG 4 cut(s) 59, 212, 1591, 4155
HpyCH4IV ACGT 6 cut(s) 210, 1586, 4150, 4198, 4413, 4859
HpySE526I ACGT 6 cut(s) 210, 1586, 4150, 4198, 4413, 4859
Hsp92I GRCGYC 1 cut(s) 251
HspAI GCGC 5 cut(s) 251, 329, 483, 619, 4763
KasI GGCGCC 1 cut(s) 250
KspAI GTTAAC 1 cut(s) 3645
LguI GCTCTTC 2 cut(s) 795, 4893
LmnI GCTCC 9 cut(s) 265, 574, 1728, 2311, 2470, 2774, 3121, 3661, 4091
MaeII ACGT 6 cut(s) 210, 1586, 4150, 4198, 4413, 4859
MaeIII GTNAC 8 cut(s) 694, 1118, 1619, 2318, 2661, 2934, 3305, 4827
MbiI CCGCTC 1 cut(s) 1728
MfeI CAATTG 1 cut(s) 3567
MflI RGATCY 5 cut(s) 1303, 1429, 2609, 4417, 4650
MlsI TGGCCA 2 cut(s) 1895, 3686
MluI ACGCGT 1 cut(s) 2095
MluNI TGGCCA 2 cut(s) 1895, 3686
Mly113I GGCGCC 1 cut(s) 251
MlyI GAGTC 9 cut(s) 1063, 1321, 1531, 2876, 3373, 3923, 4196, 4482, 4582
Mox20I TGGCCA 2 cut(s) 1895, 3686
Mph1103I ATGCAT 3 cut(s) 2337, 3832, 3997
MroXI GAANNNNTTC 4 cut(s) 404, 3139, 3527, 4221
MscI TGGCCA 2 cut(s) 1895, 3686
MslI CAYNNNNRTG 4 cut(s) 1020, 1062, 2082, 3561
Msp20I TGGCCA 2 cut(s) 1895, 3686
MspA1I CMGCKG 1 cut(s) 197
MspCI CTTAAG 1 cut(s) 2785
MspI CCGG 5 cut(s) 352, 418, 1270, 2551, 3585
MunI CAATTG 1 cut(s) 3567
Mva1269I GAATGC 6 cut(s) 485, 2337, 3995, 4765, 4925, 4948
MvaI CCWGG 8 cut(s) 584, 1527, 2309, 2685, 3655, 4034, 4372, 4685
MvnI CGCG 2 cut(s) 331, 2097
NarI GGCGCC 1 cut(s) 251
NciI CCSGG 2 cut(s) 418, 1270
NcoI CCATGG 3 cut(s) 2874, 4654, 4969
NdeI CATATG 1 cut(s) 1286
NmeAIII GCCGAG 3 cut(s) 532, 771, 786
NmuCI GTSAC 2 cut(s) 694, 2934
NsiI ATGCAT 3 cut(s) 2337, 3832, 3997
NspI RCATGY 4 cut(s) 1553, 2012, 3995, 4843
NspV TTCGAA 2 cut(s) 629, 1040
OliI CACNNNNGTG 1 cut(s) 3561
PagI TCATGA 1 cut(s) 2394
PceI AGGCCT 1 cut(s) 4506
PciSI GCTCTTC 2 cut(s) 795, 4893
PcsI WCGNNNNNNNCGW 1 cut(s) 708
PctI GAATGC 6 cut(s) 485, 2337, 3995, 4765, 4925, 4948
PdmI GAANNNNTTC 4 cut(s) 404, 3139, 3527, 4221
PflMI CCANNNNNTGG 1 cut(s) 2684
PfoI TCCNGGA 2 cut(s) 2683, 4683
Ple19I CGATCG 1 cut(s) 567
PleI GAGTC 9 cut(s) 1062, 1320, 1530, 2875, 3372, 3922, 4195, 4481, 4582
PluTI GGCGCC 1 cut(s) 254
PpsI GAGTC 9 cut(s) 1062, 1320, 1530, 2875, 3372, 3922, 4195, 4481, 4582
PpuMI RGGWCCY 2 cut(s) 1445, 3538
PsiI TTATAA 4 cut(s) 818, 912, 2448, 2901
Psp124BI GAGCTC 5 cut(s) 807, 1854, 2163, 2475, 2779
Psp5II RGGWCCY 2 cut(s) 1445, 3538
Psp6I CCWGG 8 cut(s) 582, 1525, 2307, 2683, 3653, 4032, 4370, 4683
PspFI CCCAGC 2 cut(s) 168, 2625
PspGI CCWGG 8 cut(s) 582, 1525, 2307, 2683, 3653, 4032, 4370, 4683
PspPI GGNCC 7 cut(s) 187, 794, 1445, 2260, 2499, 3538, 3582
PspPPI RGGWCCY 2 cut(s) 1445, 3538
PsrI GAACNNNNNNTAC 2 cut(s) 146, 178
PstI CTGCAG 3 cut(s) 2110, 3169, 4671
PstNI CAGNNNCTG 2 cut(s) 346, 2870
PsuI RGATCY 5 cut(s) 1303, 1429, 2609, 4417, 4650
PvuI CGATCG 1 cut(s) 567
RsaI GTAC 8 cut(s) 213, 548, 926, 1556, 2064, 2863, 3990, 4149
RsaNI GTAC 8 cut(s) 212, 547, 925, 1555, 2063, 2862, 3989, 4148
RseI CAYNNNNRTG 4 cut(s) 1020, 1062, 2082, 3561
SacI GAGCTC 5 cut(s) 807, 1854, 2163, 2475, 2779
SapI GCTCTTC 2 cut(s) 795, 4893
Sau96I GGNCC 7 cut(s) 187, 794, 1445, 2260, 2499, 3538, 3582
ScaI AGTACT 1 cut(s) 2064
SchI GAGTC 9 cut(s) 1063, 1321, 1531, 2876, 3373, 3923, 4196, 4482, 4582
SfcI CTRYAG 6 cut(s) 2106, 2208, 3165, 4667, 4696, 4914
SfoI GGCGCC 1 cut(s) 252
SfuI TTCGAA 2 cut(s) 629, 1040
SinI GGWCC 4 cut(s) 1445, 2260, 2499, 3538
SmiMI CAYNNNNRTG 4 cut(s) 1020, 1062, 2082, 3561
SmlI CTYRAG 3 cut(s) 1607, 2517, 2785
SmoI CTYRAG 3 cut(s) 1607, 2517, 2785
SseBI AGGCCT 1 cut(s) 4506
SspDI GGCGCC 1 cut(s) 250
SstI GAGCTC 5 cut(s) 807, 1854, 2163, 2475, 2779
StuI AGGCCT 1 cut(s) 4506
StyI CCWWGG 7 cut(s) 183, 1233, 2271, 2874, 3687, 4654, 4969
TaiI ACGT 6 cut(s) 213, 1589, 4153, 4201, 4416, 4862
TaqII GACCGA 1 cut(s) 2019
TatI WGTACW 3 cut(s) 924, 2062, 3988
TauI GCSGC 6 cut(s) 103, 197, 251, 390, 393, 4016
TseFI GTSAC 2 cut(s) 694, 2934
Tsp45I GTSAC 2 cut(s) 694, 2934
TspGWI ACGGA 4 cut(s) 2424, 2550, 2898, 4466
Van91I CCANNNNNTGG 1 cut(s) 2684
Vha464I CTTAAG 1 cut(s) 2785
VneI GTGCAC 4 cut(s) 1578, 3774, 4200, 4334
VpaK11BI GGWCC 4 cut(s) 1445, 2260, 2499, 3538
XagI CCTNNNNNAGG 1 cut(s) 912
XbaI TCTAGA 1 cut(s) 4490
XceI RCATGY 4 cut(s) 1553, 2012, 3995, 4843
XmiI GTMKAC 1 cut(s) 958
XmnI GAANNNNTTC 4 cut(s) 404, 3139, 3527, 4221
ZrmI AGTACT 1 cut(s) 2064
Zsp2I ATGCAT 3 cut(s) 2337, 3832, 3997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.