Rh2BG618600

Putative death-receptor fusion protein (DUF2428)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
84133331 .. 84141730
8400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG618600.1

Sequence Viewer

Length: 6582 bp
ATGTCCTCCAAATGGCGCGCGATTCAGCACCGCCACAAGTACACGTACAACACCGTCGTCTTTCCCGCCTCCTACACCGCCTCGCTGACGTCACTCCCGCCCCAAATCTCCAACTCAAAATTCTTCTCCCAATTGAGCGACCTAGTCTCCCTGAATTCCACATACGCCCAACTCAACCACACCAAGGCCCTCTCTTCCTCCTTCGGTGACTTATTAGCCAACGGTGACGAAGCCCTAGTCGCCGAAGCGGCGCCGTTTTACTTGGAGCTTCTGTTTCTGGAAAATTCTCTGCCTTTGCATAAAACCCTAGTCTCTGCTCTGGCAAAGGCCCGAACTTTCCAGGCTCTGATCGGAAAATGGTTCCGGAATCTTTGCGAGGAGTATGGTGGCGGTAAAGGGAAGCGGTTCTGCGTCTCGAGGGCGGCGCTGTCGGTGATGGGTATGCCCAAGTTGGGGTTTTTGGTTGAGGTTGTGGAGGAATGTGCGGTTTTGATCGCTTTGGATGCGGTTTCGAGCTTGAATGCTTTGGTTTCGGAGACGAAAGCCGCGGCTAGGCCTTCGCCGATTGTAATGGAGCAATGCCAGGAGGCTCTGTCTTGTTTGTATTACTTGCTTCAACGGTTTCCGGCTAAATTTGGTGTTGAGGTTGGGGATTCGGGTGTTTTGGAGATGAGTATGGCTGTCATTTTGAGCATTTTGAAGTCGGTGGCGTTTTCGAGGGACTGTTATGTGGCTGCTGGTGTGAGCTTCTGTGCAGCTCTGCAAGTGTGTCTTGGTCCTGAAGAGCTTGGCTGGTTTATAATTGAAGGTATATTTCGTCGAACTCACTCTAATTGTGAGAGTGAATTAAAGAATGCTATTGCTAAAGTTCCATGTAAAGGGGATGTGTACTCTGAAATAGGATGTTTATGTGATATGAGTAGACTTTGTTTGATAAGAGGGATTCTTACTGCGGTTTCAAGAACAGTGCTTAATACCCGGTTTGATATGTCTGGGGGTAATTCGAATGGCTATCTGGGACATGTAAATGAGGATGATCATGTTAAGTCTATACTGTATGATGGAATTTTGCCTGAACTGTGTAACTACTGCGAGAACCCTACAGATAGCCATTTTAACTTTCATGCGTTAACTGTATTGCAGATTTGCTTGCAACAAATAAAATCCTCAATGTTAGCTAATCTTACAATACCCTCGCAGCATTATGATCCAATCCCAGTGGAAATGGGAGCCCGAATATTGAGAATTGCATGGAATAATCTGGAAGATCCTTTAAGTCAAACAGTTAAACAAGCTCATCTTATTTTTGATCTCTTCCTAGACATCCGTTCCACTCTTTGTTGGTCAGAAGGTAGTGAGAGAATAAGGTCATTCTTGCAAAATATTGCTTCTGATCTTCTTCGTTTGGGTCCTCGCTGCAAGGGGAGGTATGTTCCTTTAGCTTCACTGACCAAGCGATTGGGCGCAAAAACTATGTTAAATATGAGTCCTAACCTGATGTATGAGATTGTACATGCCTATGTTGATGATGATGTCTGCTGTGCTGTCACATCATTTTTGAAGTGTTTTCTTGAGCACTTGCGTGACGAGTGTTGGAGCAGCGATGGTATTGAAGGTGGTTATGCACTTTACAGAGGGCATTGTTTGCCCCCATTATTGTATGGACTTTCTTCTGGGGTTTCAAAGCTCCGCTCTAATTTGAACACATATGCTCTTCCAATTTTACTTGAAGTGGATGAGGACAGCTTATTTTCCATGCTGGCATTTATTTCAGTTGGTCCGAGTAAGGGTGATGATCAACTGTTATTTCCTGAGCTCTTTGGTGATAACATAGTATTGAGGGTTGAACAAAAGGTGGCAATCTTAGTTTCATTGCTCAAGGTATCTCGTTTGCTTGCTTTGATTGAAGGGGACATTGATTGGTGCAAAGATTCTGATCAATATGCTCTTGTTTGTATCAAGGGAACAAAAGTTGAAGTTGTTGTTGAGTGGTTAGTGCTTGCGTTGACCCATGTTGATGAGTCATTACGTGTGGATGCTGCAGAGACTCTTTTCTTGAATCCCAAGACGGCTAGTTTGCCTTCCCATTTAGAACTCATGTTGTTCAGGGAAGCAGTCCCACTTAACATGAGATGTTGCTCTACAGGTTTTCAAATGAAGTGGAGTAGCTTGTTTAGAAAGTTTTTTTCTCGTGTGCGAACAGCCTTGGAAAGACAATTCAAGCAGGGAAGCTGGCAGCCGATTGAGGATAACAACCACAGTGGAAAACATCTTTCAAATGGTAGTGAGCACACTGAAGCTCACAGAGCAAGTGATCTTTTTCATTTCATGAGGTGGTTAAGTTCATTTCTATTTTTCTCATGCTATCCTTCTGCCCCTTATCAGAGAAAAATAATGGCCACACAGCTGATTCTGATAATGCTTAATGTTTGGTCCATTGTGCCTGCTACTGAAGAAAAATTTGGCTGTGTTTCTTTAGAAGGCTGTCTCTATCCTTATAATCAAGGAACGACTTCACCTGATTCAACTTTGTTGTTAGTTGGATCAATAATTGATAGTTGGGACAGGCTGAGAGAGAGTTTCTTTCGTATACTGTTACACTTTCCAAATCCACTTCCAGGAATTTCAGATGAAGATATGGTCCAGAACGTGGTTTCATGGGCTAAGAAATTAGTTTGCAGTCCGCGTGTGAGAGAAAGTGATGCTGGAGCTCTGGCTTTAAGGCTAATTTTCAGGAAGTATGTCTTACAGCTAGGATGGACAGTTCAAGCTTCAGTTTGTGTAGCTTGCATTCAATCACAGTCTGGATTGGAAAACAGAGATTGTCAGACTTATAATTCTAGGCACCCTGTGATTGAATATGTTAGATCACTGATTGATTGGTTGGATGTTTCCATAGTGGAAGGGGAGAGGGATCTTTCGGAAGCCTGCAAAAGCAGCTTTGTCCATGGAGTATTACTTACTCTACGATATACTTTTGAGGAACTAGACTTCAGCTCTGATGGAGTACTGTCTAGTATTTCAGAGATGAGGCATCTATTAGAGAAGCTCTTGGGGCTTGTGATGCGAATAACTTCTTTGGCACTTTGGGTGGTTTCTGCAGATGCTTTGCAGCTTCCTGAGGACATGGATGATATGGTTGATGATGAAACTTTCTTATCCGAGGTTCCAGAAGAGGTGGAGGCAAAAACATCTCTTTTGGAGCATGGAGACAATAACTCCACACTTCTGCAGGATAATAGGCGATCGGAACAAACTGTAATGGTTGGTTGCTGGCTTGCGATGAAAGAGGTGAGTCTTCTTTTGGGAACTATTGTAAGAAAGGTTCCTTTACCAAGTAGCCCTTCCTCAGTATCATTACATGCAGAAGCCACCTCTTGTGCATCTGGAGTTTCAGATATGATGGTTTCGGATGCAATGCTTGATTTGAAACAACTTGAAACAATTGGGAATCACTTCTTGGAAGTCCTTCTTAAAATGAAGCATAATGGTGCCATTGATAAAACAAGGGCTGGATTTACAGCTCTTTGCAACCGTTTACTTTGCTCAAATGATCCTAGGCTTTGTAAGTTAACAGAGTCCTGGATGGAGCAACTTATGGAAAGAACTGTGGCCAAGGGTCAAGTAGTGGATGACTTGCTAAGGAGAAGTGCAGGTATTCCCGCTGCATTTACAGCTCTATTTCTGTCAGAGCCTGAAGGTGCACCTAAGAAACTTCTCCCACGGGCCTTGCGGTGGCTGATAGATGTCGCTAAAGAGTCTTTTATGGATCAATTTGAAACCAGCAGCTCCAATGGTGACATGCGTAAATTTTGTTCGACAAAGTCGGACAATAGTTTTGATTCTGCACTGCCATCGGAGAGAAATATAAGTGATAAAGTTTCAAAGATCCGGGATGAGGGTGTCGTTCCTACCGTACATTCATTCAATGTCCTTAGAGCTGCTTTCAATGACACCAACCTGGCTACTGATACATCAGGGTTTTCTGCTGAGGCTATGATTATTTCAATTCGCTCCTTTTCTTCTCCCTACTGGGAGGTTCGGAACAGTGCTTGTCAGGCATACACTGCTTTAGTACGTCGCATGATTGGATTCCTTAATGTCCAGAAACGGGAGTCACAAAGGCGTGCACTAACTGGGGTTGAATTTTTTCATAGGTATCCCTCTTTGCATCCATTTTTATTCAAGGAACTGAAAGCTGCAACTGAGTTGCTTGGGGATGGGCCATCTGGACAGTCTGGGTGTAATCTGGAAGATGCTGTGCACCCAAGCTTGTGTCCTGTGTTGATTCTGTTATCCAGGCTTAAGCCCTCAACTATTGCAAGTGAGGCTGGAGATGACCTAGATCCTTCTTTGTTCATGCCGTTCATTAGGAGGTGCTCAACCCAAAGCAATCTCAGAGTCCGTGTTCTTGCATCTAGAGCTTTAACAGGCCTTGTATCTAATGAGAAATTGCCAACTGTTATTCTCAATATAGTATCAGAGTTGCCTAGCATAGACAACCAAGCTACAATGACTCCTGAGTCGTCCTTGCTACTTCACAAAACCAGAAGAAGTAATTGGATTCATGGAGTTCTGTTGCAGTTAAGTTCTCTCCTGGATACAAACTGTAGAAATCTGGCCGATGTCGTAAAGAAAGATCAGATTTTAGGTGACTTATTTGAAGCTCTTCTAAGTCATTCATGGATGGCAATGCCCAGATGTTGCCCTTGTCCCATCCTCAATGCCTCTTTCTTAAAGCTGCTGGACCACATGCTCAGTATTGCGAGGACAAGCCATACCAGCAGACATATTTATGCCCTCCGCAACCTACTGTTACAGTTATCTACAGAATGCCTAGATGTAGAAGCTTCTCATGGGTTCTCTTATTATGATCCGACAATAGCTCAACTCCGCCAACAAGCAGCAGCATCCTATTTCAGTTGCGTCTTTCAAGCAACTGAGGAAATGGCCGCAGAGGCTTTTCAGATGCCTCAGAGGTACTCTCAGATTGATTCAACTAATCAGAAGATACCTGAAACAGAGAATGCTTTTATAGGACTCCAGGAAAGACTGGTCCGGTCTCTGTCAGATTTGGAATATGAAGTTCGACTTGCAACATTGAAGTGGCTACTGAAATTCCTAACATCAACAGAATCTGGTAGCGGGTCCCATAATTTTAGCAGTGAGGTTAGGATCATTCTCCACTGGATCAGAACTAAACTCCAGACCTCATTGGTTGATCTCTTAGATGTGGAGAAGTATTACAGATGCTCATATTACATTCTGAGAATTATATTCACTTGGAATGCGCAACAGTTCCAGAAGCCTAGGGATGAAAAATGCACTGAATCAGTTTATGTTGGTAGTATGGAATGTGATTCTGTGTTTCTGCTTTGGGATAAGTTGATTTCCTTGTACAATCTCACAAGACATGCAAAGACTCGAGAAACACTCATATGCTGCATTGGAATCTGCATAAAGAGGTTTGCAGGTTTATTTACAACTTCTGTTCTTTCTGATGTAACGGACAACAATGAGTCTGATCAGTTAGGAAAACTGGGCGCACTTCATAGTAGAATTTCCTTTTTCACTGAATTAATTAAGAAACATAGTGCTTCATCTCAGCCGGTAAACATGCGTAAGGCAGCAGCAGAGTCTATCATAGCATCTGGTTTGCTAGAGCAAGCTGAGTTGATTGGTTCTACTGTGTTCAATAGCCGAATCCCTTTGGAAAGGTCATCGTCTCATTTTGAAGGAAAAGAAGCGGTTAATATCTATGCTCATCAAATAGTAGATATATGGTTCACATGTATCAAGCTGCTGGAGGATGAAGATGACGAGATTAGGCAAAGGCTCGCCATGGGTATTCAAAGGTGTTTTTCTTGCCAAAGATCCGGAAGAAGCTCTCTTACTGGAGAAGTTCCAACTCAAGTGGAGAAAGTGATAGAGTCGAGTTTCGAGCATCTAACTTCCATCTTTGGTCACTGGATTGGGTATTTGGATTTTCTTTTACACAGTGTACTGAATGCAGCAAGCCATGAGGTGTCCAAAGGAGATCTTGTGAGACAGGTATTTGATAAGGAAATCGATAATCATCATGAGGAAAAACTTTTGATCTGCCAGCTTTGCTGTTCTCAATTAGAGAAGCTTCCGATTACAAAATCTTGTGCTGTCGACGTTTCGGACAAACAGCAGTTTAGGGATTATTTACATGATTGGAGACTCAGGTTTTCCCGCCAATTGATGTCGTTTGCCAAGGACTGCATGGCGAAACTAGGTGGAGCCGATTGGGTTGGTGGAGTAGGTAACCATAAGGATTCATTTCTCCCCCTGTATTCCAGTTTGCTTGCATTTCATGCCATCTCGAACTGCATGTGGAATGGGAATGCGGAAGATAGTACACATCTACTGTCTGATGTTGTTGAACTCGGGAGAACTATCAGTCCATTTCTGAAGAACCCTCTGATCTCTAACCTGTATTTTTCAGTACTTAAATCTCATGAAGATGCTCTTGGTCCGACCAATGATGACTTGATCTCCAAACTGAGAGGAGAGGATGCAATATGGAAGGGGTTCAATCCCCATTTTCTTCTTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

2193

Amino Acids

245.62

Weight (kDa)

5.95

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_Trm732 PF25150 550 - 858 6.1e-17 Trm732, TPR repeats
DUF2428 PF10350 1013 - 1346 2.9e-72 THADA/TRM732, DUF2428
TPR_Trm732_C PF25151 1348 - 1531 2.3e-32 Trm732, C-terminal TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 800, 2499, 2835
AasI GACNNNNNNGTC 1 cut(s) 4522
AatII GACGTC 1 cut(s) 92
Acc16I TGCGCA 1 cut(s) 5292
Acc36I ACCTGC 2 cut(s) 3644, 5462
AccB1I GGYRCC 3 cut(s) 250, 2844, 3491
AccB7I CCANNNNNTGG 1 cut(s) 2650
AccBSI CCGCTC 1 cut(s) 1692
AccI GTMKAC 3 cut(s) 922, 2590, 6156
AccII CGCG 4 cut(s) 18, 20, 548, 2686
AccIII TCCGGA 2 cut(s) 363, 5876
AcoI YGGCCR 4 cut(s) 2397, 3612, 4620, 4950
AcuI CTGAAG 7 cut(s) 801, 2316, 2472, 2757, 2977, 3717, 6455
AcyI GRCGYC 2 cut(s) 89, 251
AdeI CACNNNGTG 1 cut(s) 2851
AflII CTTAAG 1 cut(s) 4304
AflIII ACRYGT 4 cut(s) 42, 1021, 2029, 5789
AjnI CCWGG 8 cut(s) 339, 582, 2617, 3581, 3960, 4298, 4596, 5043
AleI CACNNNNGTG 1 cut(s) 1581
AloI GAACNNNNNNTCC 4 cut(s) 2748, 2780, 6409, 6441
Alw21I GWGCWC 8 cut(s) 1578, 1818, 2292, 2713, 3706, 4132, 4266, 4382
Alw44I GTGCAC 3 cut(s) 3702, 4128, 4262
AlwNI CAGNNNCTG 3 cut(s) 346, 3695, 5138
Ama87I CYCGRG 3 cut(s) 415, 5424, 6410
Aor13HI TCCGGA 2 cut(s) 363, 5876
ApaLI GTGCAC 3 cut(s) 3702, 4128, 4262
ArsI GACNNNNNNTTYG 6 cut(s) 222, 254, 2059, 2091, 3821, 3853
AseI ATTAAT 1 cut(s) 5579
Asp700I GAANNNNTTC 8 cut(s) 404, 2512, 3073, 3455, 3468, 4149, 4668, 6554
AspA2I CCTAGG 2 cut(s) 3557, 5309
AspLEI GCGC 7 cut(s) 18, 20, 253, 427, 1466, 5293, 5546
AsuC2I CCSGG 2 cut(s) 979, 3893
AsuHPI GGTGA 9 cut(s) 218, 236, 445, 1802, 1835, 2508, 3304, 3809, 4664
AsuII TTCGAA 1 cut(s) 1004
AvaI CYCGRG 3 cut(s) 415, 5424, 6410
AvaII GGWCC 9 cut(s) 776, 1409, 1778, 2433, 2641, 4747, 5056, 5148, 6497
AvrII CCTAGG 2 cut(s) 3557, 5309
AxyI CCTNAGG 1 cut(s) 3120
BaeGI GKGCMC 3 cut(s) 3706, 4132, 4266
BalI TGGCCA 2 cut(s) 2399, 3614
BanI GGYRCC 3 cut(s) 250, 2844, 3491
BanII GRGCYC 3 cut(s) 1234, 1818, 2713
BarI GAAGNNNNNNTAC 2 cut(s) 5875, 5907
BauI CACGAG 1 cut(s) 2190
BbsI GAAGAC 1 cut(s) 3290
Bbv12I GWGCWC 8 cut(s) 1578, 1818, 2292, 2713, 3706, 4132, 4266, 4382
BbvCI CCTCAGC 1 cut(s) 3990
BceAI ACGGC 3 cut(s) 238, 2085, 4348
BcgI CGANNNNNNTGC 2 cut(s) 3837, 3871
BciT130I CCWGG 8 cut(s) 341, 584, 2619, 3583, 3962, 4300, 4598, 5045
BciVI GTATCC 2 cut(s) 4170, 4594
BclI TGATCA 4 cut(s) 1036, 1795, 1936, 5524
BcnI CCSGG 2 cut(s) 979, 3893
BfmI CTRYAG 7 cut(s) 1101, 2040, 2142, 3099, 3230, 4609, 4827
BfoI RGCGCY 2 cut(s) 254, 428
BfrI CTTAAG 1 cut(s) 4304
BfuAI ACCTGC 2 cut(s) 3644, 5462
BfuI GTATCC 2 cut(s) 4170, 4594
BglI GCCNNNNNGGC 2 cut(s) 248, 4958
BglII AGATCT 1 cut(s) 6037
BlnI CCTAGG 2 cut(s) 3557, 5309
BmcAI AGTACT 2 cut(s) 3009, 6471
Bme18I GGWCC 9 cut(s) 776, 1409, 1778, 2433, 2641, 4747, 5056, 5148, 6497
BmeT110I CYCGRG 3 cut(s) 415, 5424, 6410
BmrI ACTGGG 4 cut(s) 1211, 4042, 4146, 5549
BmuI ACTGGG 4 cut(s) 1211, 4042, 4146, 5549
BpiI GAAGAC 1 cut(s) 3290
BplI GAGNNNNNCTC 4 cut(s) 4969, 5001, 5418, 5450
BpmI CTGGAG 7 cut(s) 2727, 3408, 4353, 5027, 5189, 5825, 5916
Bpu10I CCTNAGC 3 cut(s) 1812, 3641, 3990
Bpu14I TTCGAA 1 cut(s) 1004
BpuEI CTTGAG 3 cut(s) 1592, 1862, 5895
BpuMI CCSGG 2 cut(s) 979, 3893
Bsa29I ATCGAT 1 cut(s) 6069
BsaAI YACGTR 2 cut(s) 45, 2030
BsaBI GATNNNNATC 2 cut(s) 1935, 6075
BsaHI GRCGYC 2 cut(s) 89, 251
BsaI GGTCTC 1 cut(s) 5067
BsaWI WCCGGW 3 cut(s) 363, 5058, 5876
Bse118I RCCGGY 1 cut(s) 5608
Bse1I ACTGG 9 cut(s) 1217, 4037, 4141, 5058, 5192, 5544, 5899, 5972, 6321
Bse21I CCTNAGG 1 cut(s) 3120
Bse3DI GCAATG 4 cut(s) 584, 1871, 3423, 4698
Bse8I GATNNNNATC 2 cut(s) 1935, 6075
BseAI TCCGGA 2 cut(s) 363, 5876
BseBI CCWGG 8 cut(s) 341, 584, 2619, 3583, 3962, 4300, 4598, 5045
BseCI ATCGAT 1 cut(s) 6069
BseJI GATNNNNATC 2 cut(s) 1935, 6075
BseMI GCAATG 4 cut(s) 584, 1871, 3423, 4698
BseNI ACTGG 9 cut(s) 1217, 4037, 4141, 5058, 5192, 5544, 5899, 5972, 6321
BsePI GCGCGC 1 cut(s) 16
BseRI GAGGAG 2 cut(s) 392, 6546
BseSI GKGCMC 3 cut(s) 3706, 4132, 4266
BsgI GTGCAG 3 cut(s) 774, 3672, 3831
Bsh1236I CGCG 4 cut(s) 18, 20, 548, 2686
Bsh1285I CGRYCG 1 cut(s) 3248
BshNI GGYRCC 3 cut(s) 250, 2844, 3491
BshVI ATCGAT 1 cut(s) 6069
BsiEI CGRYCG 1 cut(s) 3248
BsiHKAI GWGCWC 8 cut(s) 1578, 1818, 2292, 2713, 3706, 4132, 4266, 4382
BsiHKCI CYCGRG 3 cut(s) 415, 5424, 6410
BsiSI CCGG 7 cut(s) 364, 626, 979, 3892, 5059, 5609, 5877
BslFI GGGAC 7 cut(s) 734, 1032, 1925, 2102, 2576, 4698, 5134
BsmBI CGTCTC 3 cut(s) 418, 530, 5730
BsmFI GGGAC 7 cut(s) 734, 1032, 1925, 2102, 2576, 4698, 5134
BsmI GAATGC 8 cut(s) 526, 859, 2790, 4838, 5032, 5293, 6013, 6373
Bso31I GGTCTC 1 cut(s) 5067
BsoBI CYCGRG 3 cut(s) 415, 5424, 6410
Bsp119I TTCGAA 1 cut(s) 1004
Bsp1286I GDGCHC 9 cut(s) 1234, 1578, 1818, 2292, 2713, 3706, 4132, 4266, 4382
Bsp13I TCCGGA 2 cut(s) 363, 5876
Bsp1407I TGTACA 2 cut(s) 1510, 5397
Bsp19I CCATGG 2 cut(s) 2947, 5841
BspDI ATCGAT 1 cut(s) 6069
BspEI TCCGGA 2 cut(s) 363, 5876
BspFNI CGCG 4 cut(s) 18, 20, 548, 2686
BspHI TCATGA 3 cut(s) 2328, 6079, 6481
BspMAI CTGCAG 3 cut(s) 2044, 3103, 3234
BspMI ACCTGC 2 cut(s) 3644, 5462
BspQI GCTCTTC 3 cut(s) 777, 1719, 4674
BspT104I TTCGAA 1 cut(s) 1004
BspT107I GGYRCC 3 cut(s) 250, 2844, 3491
BspTI CTTAAG 1 cut(s) 4304
BspTNI GGTCTC 1 cut(s) 5067
BsrBI CCGCTC 1 cut(s) 1692
BsrDI GCAATG 4 cut(s) 584, 1871, 3423, 4698
BsrFI RCCGGY 1 cut(s) 5608
BsrGI TGTACA 2 cut(s) 1510, 5397
BsrI ACTGG 9 cut(s) 1217, 4037, 4141, 5058, 5192, 5544, 5899, 5972, 6321
BssAI RCCGGY 1 cut(s) 5608
BssHII GCGCGC 1 cut(s) 16
BssNAI GTATAC 1 cut(s) 2591
BssNI GRCGYC 2 cut(s) 89, 251
BssSI CACGAG 1 cut(s) 2190
BssT1I CCWWGG 8 cut(s) 183, 2205, 2947, 3557, 3615, 5309, 5841, 6237
Bst1107I GTATAC 1 cut(s) 2591
Bst2BI CACGAG 1 cut(s) 2190
Bst2UI CCWGG 8 cut(s) 341, 584, 2619, 3583, 3962, 4300, 4598, 5045
Bst6I CTCTTC 6 cut(s) 199, 777, 1319, 1719, 3168, 4674
BstACI GRCGYC 2 cut(s) 89, 251
BstAFI CTTAAG 1 cut(s) 4304
BstAPI GCANNNNNTGC 3 cut(s) 1645, 4067, 6338
BstAUI TGTACA 2 cut(s) 1510, 5397
BstBAI YACGTR 2 cut(s) 45, 2030
BstBI TTCGAA 1 cut(s) 1004
BstDSI CCRYGG 4 cut(s) 546, 2947, 3722, 5841
BstEII GGTNACC 1 cut(s) 6287
BstFNI CGCG 4 cut(s) 18, 20, 548, 2686
BstH2I RGCGCY 2 cut(s) 254, 428
BstHHI GCGC 7 cut(s) 18, 20, 253, 427, 1466, 5293, 5546
BstMCI CGRYCG 1 cut(s) 3248
BstNI CCWGG 8 cut(s) 341, 584, 2619, 3583, 3962, 4300, 4598, 5045
BstNSI RCATGY 9 cut(s) 1025, 1517, 3365, 3805, 4756, 5417, 5620, 5793, 6358
BstPI GGTNACC 1 cut(s) 6287
BstSFI CTRYAG 7 cut(s) 1101, 2040, 2142, 3099, 3230, 4609, 4827
BstSLI GKGCMC 3 cut(s) 3706, 4132, 4266
BstUI CGCG 4 cut(s) 18, 20, 548, 2686
BstV2I GAAGAC 1 cut(s) 3290
BstX2I RGATCY 6 cut(s) 1267, 2914, 3888, 4345, 5873, 6037
BstXI CCANNNNNNTGG 1 cut(s) 1459
BstYI RGATCY 6 cut(s) 1267, 2914, 3888, 4345, 5873, 6037
BstZ17I GTATAC 1 cut(s) 2591
Bsu15I ATCGAT 1 cut(s) 6069
Bsu36I CCTNAGG 1 cut(s) 3120
BsuI GTATCC 2 cut(s) 4170, 4594
BsuTUI ATCGAT 1 cut(s) 6069
BtgI CCRYGG 4 cut(s) 546, 2947, 3722, 5841
BtgZI GCGATG 2 cut(s) 1617, 3296
BtsI GCAGTG 3 cut(s) 3848, 4065, 5170
BveI ACCTGC 2 cut(s) 3644, 5462
CaiI CAGNNNCTG 3 cut(s) 346, 3695, 5138
CciI TCATGA 3 cut(s) 2328, 6079, 6481
CfoI GCGC 7 cut(s) 18, 20, 253, 427, 1466, 5293, 5546
Cfr10I RCCGGY 1 cut(s) 5608
Cfr42I CCGCGG 1 cut(s) 549
ClaI ATCGAT 1 cut(s) 6069
CseI GACGC 2 cut(s) 400, 4915
DinI GGCGCC 1 cut(s) 252
DraIII CACNNNGTG 1 cut(s) 2851
DrdI GACNNNNNNGTC 1 cut(s) 4522
DseDI GACNNNNNNGTC 1 cut(s) 4522
EaeI YGGCCR 4 cut(s) 2397, 3612, 4620, 4950
Eam1104I CTCTTC 6 cut(s) 199, 777, 1319, 1719, 3168, 4674
EarI CTCTTC 6 cut(s) 199, 777, 1319, 1719, 3168, 4674
EciI GGCGGA 1 cut(s) 4883
Ecl136II GAGCTC 2 cut(s) 1816, 2711
Eco130I CCWWGG 8 cut(s) 183, 2205, 2947, 3557, 3615, 5309, 5841, 6237
Eco147I AGGCCT 2 cut(s) 556, 4434
Eco24I GRGCYC 3 cut(s) 1234, 1818, 2713
Eco31I GGTCTC 1 cut(s) 5067
Eco47I GGWCC 9 cut(s) 776, 1409, 1778, 2433, 2641, 4747, 5056, 5148, 6497
Eco53kI GAGCTC 2 cut(s) 1816, 2711
Eco57I CTGAAG 7 cut(s) 801, 2316, 2472, 2757, 2977, 3717, 6455
Eco81I CCTNAGG 1 cut(s) 3120
Eco88I CYCGRG 3 cut(s) 415, 5424, 6410
Eco91I GGTNACC 1 cut(s) 6287
EcoICRI GAGCTC 2 cut(s) 1816, 2711
EcoO109I RGGNCCY 3 cut(s) 187, 1409, 5148
EcoO65I GGTNACC 1 cut(s) 6287
EcoRI GAATTC 1 cut(s) 154
EcoRII CCWGG 8 cut(s) 339, 582, 2617, 3581, 3960, 4298, 4596, 5043
EcoT14I CCWWGG 8 cut(s) 183, 2205, 2947, 3557, 3615, 5309, 5841, 6237
EcoT38I GRGCYC 3 cut(s) 1234, 1818, 2713
EgeI GGCGCC 1 cut(s) 252
EheI GGCGCC 1 cut(s) 252
ErhI CCWWGG 8 cut(s) 183, 2205, 2947, 3557, 3615, 5309, 5841, 6237
Esp3I CGTCTC 3 cut(s) 418, 530, 5730
FaqI GGGAC 7 cut(s) 734, 1032, 1925, 2102, 2576, 4698, 5134
FauI CCCGC 5 cut(s) 73, 105, 3670, 5138, 6224
FauNDI CATATG 2 cut(s) 1708, 5438
FbaI TGATCA 4 cut(s) 1036, 1795, 1936, 5524
FblI GTMKAC 3 cut(s) 922, 2590, 6156
FriOI GRGCYC 3 cut(s) 1234, 1818, 2713
FspI TGCGCA 1 cut(s) 5292
GlaI GCGC 7 cut(s) 17, 19, 252, 426, 1465, 5292, 5545
GsuI CTGGAG 7 cut(s) 2727, 3408, 4353, 5027, 5189, 5825, 5916
HaeII RGCGCY 2 cut(s) 254, 428
HapII CCGG 7 cut(s) 364, 626, 979, 3892, 5059, 5609, 5877
HgaI GACGC 2 cut(s) 400, 4915
HhaI GCGC 7 cut(s) 18, 20, 253, 427, 1466, 5293, 5546
Hin1I GRCGYC 2 cut(s) 89, 251
Hin6I GCGC 7 cut(s) 16, 18, 251, 425, 1464, 5291, 5544
HinP1I GCGC 7 cut(s) 16, 18, 251, 425, 1464, 5291, 5544
HincII GTYRAC 4 cut(s) 1131, 2007, 3573, 6157
HindII GTYRAC 4 cut(s) 1131, 2007, 3573, 6157
HindIII AAGCTT 4 cut(s) 2769, 4270, 4848, 6128
HpaI GTTAAC 2 cut(s) 1131, 3573
HpaII CCGG 7 cut(s) 364, 626, 979, 3892, 5059, 5609, 5877
HphI GGTGA 9 cut(s) 218, 236, 445, 1802, 1835, 2508, 3304, 3809, 4664
Hpy99I CGWCG 4 cut(s) 59, 822, 4083, 6161
HpyCH4IV ACGT 6 cut(s) 44, 89, 2029, 2649, 4078, 6159
HpySE526I ACGT 6 cut(s) 44, 89, 2029, 2649, 4078, 6159
Hsp92I GRCGYC 2 cut(s) 89, 251
HspAI GCGC 7 cut(s) 16, 18, 251, 425, 1464, 5291, 5544
KasI GGCGCC 1 cut(s) 250
KflI GGGWCCC 1 cut(s) 5148
Kpn2I TCCGGA 2 cut(s) 363, 5876
Ksp22I TGATCA 4 cut(s) 1036, 1795, 1936, 5524
KspAI GTTAAC 2 cut(s) 1131, 3573
KspI CCGCGG 1 cut(s) 549
LguI GCTCTTC 3 cut(s) 777, 1719, 4674
MaeII ACGT 6 cut(s) 44, 89, 2029, 2649, 4078, 6159
MbiI CCGCTC 1 cut(s) 1692
MfeI CAATTG 3 cut(s) 131, 3444, 6221
MflI RGATCY 6 cut(s) 1267, 2914, 3888, 4345, 5873, 6037
MhlI GDGCHC 9 cut(s) 1234, 1578, 1818, 2292, 2713, 3706, 4132, 4266, 4382
MlsI TGGCCA 2 cut(s) 2399, 3614
MluNI TGGCCA 2 cut(s) 2399, 3614
Mly113I GGCGCC 1 cut(s) 251
MmeI TCCRAC 8 cut(s) 135, 1574, 2521, 2865, 3807, 4901, 5930, 6524
Mox20I TGGCCA 2 cut(s) 2399, 3614
MroI TCCGGA 2 cut(s) 363, 5876
MroXI GAANNNNTTC 8 cut(s) 404, 2512, 3073, 3455, 3468, 4149, 4668, 6554
MscI TGGCCA 2 cut(s) 2399, 3614
MslI CAYNNNNRTG 9 cut(s) 1026, 1518, 1581, 2016, 3489, 4794, 5104, 5437, 6486
Msp20I TGGCCA 2 cut(s) 2399, 3614
MspA1I CMGCKG 3 cut(s) 548, 2407, 3665
MspCI CTTAAG 1 cut(s) 4304
MspI CCGG 7 cut(s) 364, 626, 979, 3892, 5059, 5609, 5877
MunI CAATTG 3 cut(s) 131, 3444, 6221
Mva1269I GAATGC 8 cut(s) 526, 859, 2790, 4838, 5032, 5293, 6013, 6373
MvaI CCWGG 8 cut(s) 341, 584, 2619, 3583, 3962, 4300, 4598, 5045
MvnI CGCG 4 cut(s) 18, 20, 548, 2686
NarI GGCGCC 1 cut(s) 251
NciI CCSGG 2 cut(s) 979, 3893
NcoI CCATGG 2 cut(s) 2947, 5841
NdeI CATATG 2 cut(s) 1708, 5438
NmuCI GTSAC 9 cut(s) 90, 206, 224, 1546, 1583, 3797, 4116, 4652, 5963
NsbI TGCGCA 1 cut(s) 5292
NspI RCATGY 9 cut(s) 1025, 1517, 3365, 3805, 4756, 5417, 5620, 5793, 6358
NspV TTCGAA 1 cut(s) 1004
OliI CACNNNNGTG 1 cut(s) 1581
PacI TTAATTAA 1 cut(s) 5583
PaeR7I CTCGAG 2 cut(s) 415, 5424
PagI TCATGA 3 cut(s) 2328, 6079, 6481
PauI GCGCGC 1 cut(s) 16
PceI AGGCCT 2 cut(s) 556, 4434
PciI ACATGT 2 cut(s) 1021, 5789
PciSI GCTCTTC 3 cut(s) 777, 1719, 4674
PcsI WCGNNNNNNNCGW 1 cut(s) 3912
PctI GAATGC 8 cut(s) 526, 859, 2790, 4838, 5032, 5293, 6013, 6373
PdmI GAANNNNTTC 8 cut(s) 404, 2512, 3073, 3455, 3468, 4149, 4668, 6554
PflFI GACNNNGTC 2 cut(s) 143, 3823
PflMI CCANNNNNTGG 1 cut(s) 2650
PfoI TCCNGGA 5 cut(s) 2617, 3581, 3891, 4596, 5043
Ple19I CGATCG 1 cut(s) 3248
PluTI GGCGCC 1 cut(s) 254
Ppu21I YACGTR 2 cut(s) 45, 2030
PpuMI RGGWCCY 2 cut(s) 1409, 5148
PscI ACATGT 2 cut(s) 1021, 5789
PshBI ATTAAT 1 cut(s) 5579
PsiI TTATAA 3 cut(s) 800, 2499, 2835
Psp124BI GAGCTC 2 cut(s) 1818, 2713
Psp5II RGGWCCY 2 cut(s) 1409, 5148
Psp6I CCWGG 8 cut(s) 339, 582, 2617, 3581, 3960, 4298, 4596, 5043
PspEI GGTNACC 1 cut(s) 6287
PspGI CCWGG 8 cut(s) 339, 582, 2617, 3581, 3960, 4298, 4596, 5043
PspPPI RGGWCCY 2 cut(s) 1409, 5148
PsrI GAACNNNNNNTAC 4 cut(s) 3309, 3341, 3799, 3831
PstI CTGCAG 3 cut(s) 2044, 3103, 3234
PstNI CAGNNNCTG 3 cut(s) 346, 3695, 5138
PsuI RGATCY 6 cut(s) 1267, 2914, 3888, 4345, 5873, 6037
PsyI GACNNNGTC 2 cut(s) 143, 3823
PteI GCGCGC 1 cut(s) 16
PvuI CGATCG 1 cut(s) 3248
PvuII CAGCTG 1 cut(s) 2407
RseI CAYNNNNRTG 9 cut(s) 1026, 1518, 1581, 2016, 3489, 4794, 5104, 5437, 6486
SacI GAGCTC 2 cut(s) 1818, 2713
SacII CCGCGG 1 cut(s) 549
SalI GTCGAC 1 cut(s) 6155
SapI GCTCTTC 3 cut(s) 777, 1719, 4674
ScaI AGTACT 2 cut(s) 3009, 6471
SduI GDGCHC 9 cut(s) 1234, 1578, 1818, 2292, 2713, 3706, 4132, 4266, 4382
SfcI CTRYAG 7 cut(s) 1101, 2040, 2142, 3099, 3230, 4609, 4827
SfoI GGCGCC 1 cut(s) 252
Sfr274I CTCGAG 2 cut(s) 415, 5424
Sfr303I CCGCGG 1 cut(s) 549
SfuI TTCGAA 1 cut(s) 1004
SgrBI CCGCGG 1 cut(s) 549
SinI GGWCC 9 cut(s) 776, 1409, 1778, 2433, 2641, 4747, 5056, 5148, 6497
SlaI CTCGAG 2 cut(s) 415, 5424
SmiMI CAYNNNNRTG 9 cut(s) 1026, 1518, 1581, 2016, 3489, 4794, 5104, 5437, 6486
SmlI CTYRAG 6 cut(s) 415, 1571, 1877, 4304, 5424, 5910
SmoI CTYRAG 6 cut(s) 415, 1571, 1877, 4304, 5424, 5910
SseBI AGGCCT 2 cut(s) 556, 4434
SspDI GGCGCC 1 cut(s) 250
SspI AATATT 2 cut(s) 1239, 1384
SstI GAGCTC 2 cut(s) 1818, 2713
StuI AGGCCT 2 cut(s) 556, 4434
StyI CCWWGG 8 cut(s) 183, 2205, 2947, 3557, 3615, 5309, 5841, 6237
TaiI ACGT 6 cut(s) 47, 92, 2032, 2652, 4081, 6162
TatI WGTACW 8 cut(s) 39, 888, 1510, 3007, 5397, 6001, 6380, 6469
TauI GCSGC 5 cut(s) 251, 425, 548, 551, 4955
TseFI GTSAC 9 cut(s) 90, 206, 224, 1546, 1583, 3797, 4116, 4652, 5963
Tsp45I GTSAC 9 cut(s) 90, 206, 224, 1546, 1583, 3797, 4116, 4652, 5963
TspGWI ACGGA 3 cut(s) 1316, 4394, 5522
Tth111I GACNNNGTC 2 cut(s) 143, 3823
Van91I CCANNNNNTGG 1 cut(s) 2650
Vha464I CTTAAG 1 cut(s) 4304
VneI GTGCAC 3 cut(s) 3702, 4128, 4262
VpaK11BI GGWCC 9 cut(s) 776, 1409, 1778, 2433, 2641, 4747, 5056, 5148, 6497
VspI ATTAAT 1 cut(s) 5579
XbaI TCTAGA 1 cut(s) 4418
XceI RCATGY 9 cut(s) 1025, 1517, 3365, 3805, 4756, 5417, 5620, 5793, 6358
XcmI CCANNNNNNNNNTGG 1 cut(s) 6244
XhoI CTCGAG 2 cut(s) 415, 5424
XmaJI CCTAGG 2 cut(s) 3557, 5309
XmiI GTMKAC 3 cut(s) 922, 2590, 6156
XmnI GAANNNNTTC 8 cut(s) 404, 2512, 3073, 3455, 3468, 4149, 4668, 6554
ZraI GACGTC 1 cut(s) 90
ZrmI AGTACT 2 cut(s) 3009, 6471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.