pycom17g07410

histone acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0009704
Physical Location & Seq
Forward (+)
5329205 .. 5336854
7650 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4548 bp
ATGAAGTCTCATAAAATCAGCAAGATGGATGTACAAATATACAATTCAGAACAAACTCTTGGCCATATGCCTAACTACCCAAGGCTGAATTCGACTCCTTTTTTGCCGGGAGGGGATAGTTTACGTTGTCAAGCGTTGAAATGCCCAGTAGGTTACTTGAGGGATTGGCGCAGAGGTCCTAAAGTTATCCGCTTTCGTAATTTCGTGAGGAAACTACTTAATGAATACTTCTTAATACGTACCAATTACGGGTGTGGAGAGATGGCATCTGATTATGCGGCTGTTGTGGAGAACCAGCTATTTATGGAGGCTACTTCTGAGGAGGAGTATGTGAATGTGGAAACATTATCTCATCGGCTGCAAAAATTACTCAACCTATATGATGCAAACTCCAGTCAACCAGCAGTTTCTGCAGAAACACCTTTCAACTGCTTGGGTGGTGCTAGTAGATCTGACTCTGCTTGTAATAATGCATTCATAGCTAACAATGCTGACGATGTTAACCTCATAAAAGGGTTCCCTTTTAATGGTGATAAGCAGGGAGATACTAAAAGATTCATTACTTCCGATGAACTGGACATGCATTTCCTGACAGGCCTAAGACAGGCTTCTACTGAGACTGTTGTTCCTCTTGAGGATGCTTCAACATCATTCGCTGCATGCTCCAATGCCAATCAAGGATATCTGAATTACATTTCTGACATATCATCTGATTGTCAGGTTCAACATCAACATCTTGGCCATGTTGGATCCTCTAAATTTGAAGGTCGTTTGGGGTGTAACAAGAATGCTCAATCGGTTGTTTTTCCATCCACAGAGGGAGAGTTTTCAGTGTTTTCCTCTTCTAACTTGCTGATCCCTCAACATGTTCCAACGGATGTTCCTGTAGTCTCCAGAGAGATCTCAACTCTTGAGGATATATTGCAATCTTGCTCCCAGATGATAAAGTCTCAACATAACCGGAAACGACCCCTTCATCCATTAATGTGGTCTCAGGTTCCTCCAGTACAGTCACTTGGTGCTCAACAGTATGCTTCAGATGGACCCAGTGCAGGAAACAATGAAGATATGCTGCCTTTGTCAAAAAGGTTGAAGATGGGTAACAAAAATGGAAGTAATCATCTATTGGCTCCTTCAGTTGTTCAACATTGTGTTCCTGGAGGACTTTCATATCTGCAGCAACAGTCTGAATCTCCTACATCCATTAATTCTGAGGACATAGTGCAATCTTGTTCTCAGATGATAAAGTGTCAACATAACCAAAAACAATCCTCTCATCCATTGAAGCAGCCTCAGGCTCCTTCTGAACAGTCACATGGTGCTCAACAGTATGCTTCAGATGGACCCAATTCAGGAAGCATCAAAGATTTGCTGCCCTTGTCAAACATGTTGAAGATGGATAATAAAAATAAAAGTTCTCATGTATTGGCTCCTTCAGTTGTTCAAATTTGTGTTCCTGGAGGACTTTCAGATCTGCATCAACAGTCTGAATCTCCTATATCTATAAGTTCTGAGGATATAGTGCAATCTTGCTCCCAGATGATAAAGGCTCAGCATAACCGAAAACGACCCTTTCATCCATCTTTGCAGCCTCAGTTTCCTCCTGAACAGTCACATGGTGCTCAACAGTATGCTTTAAATGGACCCAGTTCAGGAGATATTGAAGATAAGTTGCCATCGTCAAAAAATTTGAAGATGGAGAACAAAAATGAAAATTACCATATATTGGCTCCTTCAGTCGTTCAACCTTGTGCTCCTGAAGGACTTTCATATCTGCAGCAACAATCTGAATCTCCTGTATCTATTAACTCTGAAGTAACGCATGTGGAGATGGATCCTGTAAATAATTCCATACAAGAATCAATGAGGATCAATGACGTTACAAAATGTGATTCTGACAATATCCTTGAACTGAACTCCGAGAGTGTGCCCATTCCTTCTGGGGAAGGATCTGCTTGTCATCAGAGGGAACAGATAGACCTTACTAGCAGTAGTGAGATTATAGACAATGTGAAAGAATTTTCTGGAAGAATGGGGTCGAAGAGTTTCCAATTTTTCTCGGAAGATCGTAAAGAGGGAACTGTGAGGACTGAGTTCATCCAGACAGAGCCAGAACCAGACTCTGATTTTGAGGAAGTAATAAAGCCACAGAATCCAGAAACAAATAGTGTCCTATTGACGGAACCATTTAAAGAAGAGAAAATCAAGGAACATTTATCGAATCTTGGGCAGAGCATTGATCAGAGTATCTTGATGGAAGACAGAGAAAACAGTGAGAAAGTGTGTCAGTTGTGCGCATTAGGAAAGCTGTTTTTTGCCCCTGCACAAATATATTGCTCATGCTGTGGTCTCCGTATCAAGCGCGGTGTAAACTATTACTGCACACTAGACGAGCATAGTTCACGATATTGTTTTTGTAACTTGTGCTATAAGGGGTCTCGAAGAGGAAATATCTCATTTCATGGGATCCGTGTCTCAAAGGCAACACTTGGTAGAAAGAAGAATGATGAGGAAACTGAAGAACCGTGGGTTCAATGTGATAAATGCAAGGGCTGGCAACATCAGATATGTGCTGTCTTGAATGATAAAAGTGCTCTGAGAGGCCAAGCTGAGACCACTTGTCTCAAATGCTTGTTAAAAGAAACAGAATGTGGGGAGCTCAAGAACTTACCAAAGAGTTCTGTTTTCAGTGCAAGAGATCTGCCAACTACCATGCTTAGTGACCATATAGAACAAAGACTCTTTAGGCGCCTCAAGCAAGAGAGAGAAGGGAGAGCAAAGGTCGAAGGAAAAGAGTTTTTTGAGGTTCCAGGAGCGGAAGATCTTGTTGTGAGAGTAGTGTTATCTGTTCAAAAAACACTAAAAGTTAAGCAGAAGTTTTTGGATCTCTTTCATGATGAGAATTACCCTGCTGAATTCCCATACAAATCAAAGGTGAGACAGCTTTTACAATCCATAGACTTCTTTTTCCCACTGAATCTCCTCTCCATCAGTATAATTGCTTGTTTGTTACAACTTCAGGAAAACCTAATTGCACTTTTTTTTTATTTTTGCATCCAGGTTATTCTTTTGTTTCAGAAGATTGAAGGAGTAGATGTATGCCTTTTTGGATTGTATGTGCAGGAGTTTGGCTCAGAATGTAGTCACCCGAATAAGCGTTGTGTTTATATCTCATATCTGGATTCTATTAAGTACTTCAGGCCAGAGATAAAAACCGTGACTGGAGAAGCTCTTCGTACGTTTGTTTATCATGAAATACTGATAGCTTACCTTGAGTTTTGCAAGAAACGAGGTTTTGTTACGTCCTACATATGGGCGTGTGCCCCTTTAAAGGGTGAAGATTATATATTACACTGCCATCCAGAAATGCAGAATATGCCCAAGCCTGAGAAGCTGCGGCAATGGTATCAGTCAATGATAAAAAAAGCAGCTGAAGAAAAAATTGTGGTCAGTCACACTAATTTATATGATCGGTTTTTTATCCCCACTGGGGAATGTAACTCCAAGGTAACAGCAACTCGTTTGCCATATTTTGATGGTGACTATTGGTCTGGTGCTACTGAGGATGCGATCAGGGCGATTGAACAAGGGATGGCAGATACGCAGAAGAAATCGAAGAAAACAATAACAAAGAGAACTTTGAAAGCCATGGGGCATACAAATCCTTCTGATGGCTCTACCAAAGATATTCTTCTGATGCAGAGAATGGGTCAAACCATTTTACAGAGTAAGGAGGACTTTATAATTGTCGACATGCAGTATGTTTGCACGCACTGTCATGAAGCAATATTATCTGGACGACGCTGGTCTTGTGGTCAGTGCAAAAGTTTTCACCTCTGTGGAAGATGCCATGACGCTGAGCGCAAAAATTGTGGACAGGACATTCACATCTCCATCAACATGGAACGACATGTGCTTTCTCAGGTTGTGGTGGAGGATATGCTTTCTGACACTAAGGACGAAGATGTTATTTCGAACAACAATTTACTTGAGAATAGGCATAGTTTCTTGAGCTTGTGTGAGAAAAAACACTATCAGTTTGGCACACTTCGCCGGGCCAAGTATTCCTCAAAAATGATTCTGCATCATCTCCATAATGCTACTGCGCGAACTTCTGGGAACACATGCAGTCTGTGCCATAAGGATGCTGTGATTGATCAGAGATGGGTGTGTGAAATGTGCCCAGAGTTTGATGCTTGTGCAACATGCTATCGAGAGAAAGGAAGCTCTTGTCATATTCATAAGTTGACTCTAAGTTCTTCAGCTAGCCGTAGCCATACGACAGAGAGTCAACAGGCACCAAAAAAAGGATTTCTGATAAGGGAACTGCTGGATGTTTTACAGCATGCAACTACATGTTACCCAACCAAGATTCAGCCTTGCTTTTACCCAAACTGCCTCCAAATGAAGAAGCTAATCCACCATGCAGTCAAGTGCACGGTTCGGGCTTCAGGAGGTTGTCAGTTCTGTAAGAAGGCATGGTCCGGATTGATTTTGCATTCGTTAAACTGTAGAAAACTGAATTGTACCACACCGCGTTGCATGTGA

Protein Analysis

1516

Amino Acids

170.76

Weight (kDa)

7.15

Isoelectric Point (pI)

58.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_KAT11 PF08214 1016 - 1192 2.5e-30 Histone acetylation protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3743
Acc16I TGCGCA 1 cut(s) 2296
AccB1I GGYRCC 2 cut(s) 2748, 4297
AccB7I CCANNNNNTGG 1 cut(s) 1726
AccBSI CCGCTC 1 cut(s) 2816
AccI GTMKAC 1 cut(s) 3750
AccII CGCG 3 cut(s) 2364, 4108, 4537
AccIII TCCGGA 1 cut(s) 4484
AciI CCGC 6 cut(s) 190, 278, 2364, 2816, 3397, 4535
AcoI YGGCCR 2 cut(s) 61, 739
AcsI RAATTY 6 cut(s) 88, 758, 1446, 1687, 2018, 2915
AcyI GRCGYC 1 cut(s) 2749
AdeI CACNNNGTG 3 cut(s) 1019, 1319, 1619
AfaI GTAC 6 cut(s) 33, 241, 1008, 3194, 3238, 4528
AflIII ACRYGT 4 cut(s) 865, 1386, 3910, 4355
AhdI GACNNNNNGTC 3 cut(s) 2619, 3547, 4287
AjnI CCWGG 4 cut(s) 1156, 1456, 2809, 3057
AjuI GAANNNNNNNTTGG 4 cut(s) 42, 73, 74, 105
AleI CACNNNNGTG 1 cut(s) 3837
Alw21I GWGCWC 7 cut(s) 1024, 1324, 1624, 1756, 2596, 2661, 4439
Alw44I GTGCAC 1 cut(s) 4435
AlwNI CAGNNNCTG 2 cut(s) 410, 2123
Aor13HI TCCGGA 1 cut(s) 4484
AoxI GGCC 6 cut(s) 61, 595, 739, 2602, 3200, 4056
ApaLI GTGCAC 1 cut(s) 4435
ApoI RAATTY 6 cut(s) 88, 758, 1446, 1687, 2018, 2915
ArsI GACNNNNNNTTYG 4 cut(s) 85, 117, 2111, 2143
AseI ATTAAT 2 cut(s) 983, 1206
Asp700I GAANNNNTTC 2 cut(s) 2045, 3231
AspLEI GCGC 6 cut(s) 171, 2297, 2364, 2751, 3864, 4108
AspS9I GGNCC 6 cut(s) 176, 1043, 1343, 1643, 4056, 4482
AsuC2I CCSGG 2 cut(s) 108, 4055
AsuHPI GGTGA 6 cut(s) 542, 2947, 3137, 3347, 3551, 3824
AsuII TTCGAA 1 cut(s) 3974
AsuNHI GCTAGC 1 cut(s) 4265
AvaII GGWCC 5 cut(s) 176, 1043, 1343, 1643, 4482
AxyI CCTNAGG 1 cut(s) 1293
BaeGI GKGCMC 4 cut(s) 1932, 3325, 4184, 4439
BalI TGGCCA 2 cut(s) 63, 741
BamHI GGATCC 3 cut(s) 749, 1834, 2466
BanI GGYRCC 2 cut(s) 2748, 4297
BanII GRGCYC 1 cut(s) 2661
BbsI GAAGAC 1 cut(s) 2265
Bbv12I GWGCWC 7 cut(s) 1024, 1324, 1624, 1756, 2596, 2661, 4439
BceAI ACGGC 1 cut(s) 4254
BciT130I CCWGG 4 cut(s) 1158, 1458, 2811, 3059
BclI TGATCA 2 cut(s) 2239, 4156
BcnI CCSGG 2 cut(s) 108, 4055
BfaI CTAG 4 cut(s) 444, 1986, 2387, 4266
BfmI CTRYAG 5 cut(s) 411, 885, 1175, 1775, 4510
BfoI RGCGCY 1 cut(s) 2752
BglII AGATCT 5 cut(s) 449, 900, 1471, 2698, 2821
BlpI GCTNAGC 2 cut(s) 1551, 3858
BmcAI AGTACT 1 cut(s) 3194
Bme1390I CCNGG 6 cut(s) 108, 1158, 1458, 2811, 3059, 4055
Bme18I GGWCC 5 cut(s) 176, 1043, 1343, 1643, 4482
BmeRI GACNNNNNGTC 3 cut(s) 2619, 3547, 4287
BmgT120I GGNCC 6 cut(s) 176, 1043, 1343, 1643, 4056, 4482
BmrFI CCNGG 6 cut(s) 108, 1158, 1458, 2811, 3059, 4055
BmrI ACTGGG 4 cut(s) 140, 1041, 1641, 3498
BmtI GCTAGC 1 cut(s) 4269
BmuI ACTGGG 4 cut(s) 140, 1041, 1641, 3498
BoxI GACNNNNGTC 1 cut(s) 3805
BpiI GAAGAC 1 cut(s) 2265
BplI GAGNNNNNCTC 2 cut(s) 3116, 3148
BpmI CTGGAG 6 cut(s) 376, 877, 987, 1179, 1479, 3243
Bpu1102I GCTNAGC 2 cut(s) 1551, 3858
Bpu14I TTCGAA 1 cut(s) 3974
BpuEI CTTGAG 8 cut(s) 178, 653, 932, 2645, 2738, 3293, 4010, 4030
BpuMI CCSGG 2 cut(s) 108, 4055
BsaAI YACGTR 1 cut(s) 239
BsaBI GATNNNNATC 1 cut(s) 1476
BsaHI GRCGYC 1 cut(s) 2749
BsaI GGTCTC 4 cut(s) 996, 2354, 2442, 2606
BsaJI CCNNGG 4 cut(s) 80, 2525, 3504, 3648
BsaWI WCCGGW 2 cut(s) 960, 4484
BsaXI ACNNNNNCTCC 4 cut(s) 2964, 2994, 3081, 3111
Bse1I ACTGG 8 cut(s) 146, 393, 579, 1004, 1047, 1647, 3226, 3493
Bse21I CCTNAGG 1 cut(s) 1293
Bse3DI GCAATG 1 cut(s) 3407
Bse8I GATNNNNATC 1 cut(s) 1476
BseAI TCCGGA 1 cut(s) 4484
BseBI CCWGG 4 cut(s) 1158, 1458, 2811, 3059
BseDI CCNNGG 4 cut(s) 80, 2525, 3504, 3648
BseJI GATNNNNATC 1 cut(s) 1476
BseMI GCAATG 1 cut(s) 3407
BseNI ACTGG 8 cut(s) 146, 393, 579, 1004, 1047, 1647, 3226, 3493
BseRI GAGGAG 3 cut(s) 335, 338, 2972
BseSI GKGCMC 4 cut(s) 1932, 3325, 4184, 4439
BsgI GTGCAG 4 cut(s) 1071, 2307, 2365, 3140
Bsh1236I CGCG 3 cut(s) 2364, 4108, 4537
BshFI GGCC 6 cut(s) 63, 597, 741, 2604, 3202, 4058
BshNI GGYRCC 2 cut(s) 2748, 4297
BsiHKAI GWGCWC 7 cut(s) 1024, 1324, 1624, 1756, 2596, 2661, 4439
BsiSI CCGG 4 cut(s) 107, 961, 4054, 4485
BsiWI CGTACG 1 cut(s) 3236
BsmI GAATGC 3 cut(s) 473, 793, 4498
BsnI GGCC 6 cut(s) 63, 597, 741, 2604, 3202, 4058
Bso31I GGTCTC 4 cut(s) 996, 2354, 2442, 2606
Bsp119I TTCGAA 1 cut(s) 3974
Bsp13I TCCGGA 1 cut(s) 4484
Bsp1407I TGTACA 1 cut(s) 31
Bsp1720I GCTNAGC 2 cut(s) 1551, 3858
Bsp19I CCATGG 1 cut(s) 3648
BspACI CCGC 6 cut(s) 190, 278, 2364, 2816, 3397, 4535
BspANI GGCC 6 cut(s) 63, 597, 741, 2604, 3202, 4058
BspEI TCCGGA 1 cut(s) 4484
BspFNI CGCG 3 cut(s) 2364, 4108, 4537
BspHI TCATGA 3 cut(s) 2893, 3250, 3778
BspMAI CTGCAG 3 cut(s) 415, 1179, 1779
BspOI GCTAGC 1 cut(s) 4269
BspQI GCTCTTC 1 cut(s) 3237
BspT104I TTCGAA 1 cut(s) 3974
BspT107I GGYRCC 2 cut(s) 2748, 4297
BspTNI GGTCTC 4 cut(s) 996, 2354, 2442, 2606
BsrBI CCGCTC 1 cut(s) 2816
BsrDI GCAATG 1 cut(s) 3407
BsrGI TGTACA 1 cut(s) 31
BsrI ACTGG 8 cut(s) 146, 393, 579, 1004, 1047, 1647, 3226, 3493
BssECI CCNNGG 4 cut(s) 80, 2525, 3504, 3648
BssNI GRCGYC 1 cut(s) 2749
BssT1I CCWWGG 3 cut(s) 80, 3504, 3648
Bst2UI CCWGG 4 cut(s) 1158, 1458, 2811, 3059
Bst6I CTCTTC 5 cut(s) 847, 2036, 2190, 2437, 3237
BstACI GRCGYC 1 cut(s) 2749
BstAPI GCANNNNNTGC 3 cut(s) 410, 3376, 4134
BstAUI TGTACA 1 cut(s) 31
BstBAI YACGTR 1 cut(s) 239
BstBI TTCGAA 1 cut(s) 3974
BstC8I GCNNGC 5 cut(s) 661, 2555, 3770, 4267, 4347
BstDSI CCRYGG 2 cut(s) 2525, 3648
BstENI CCTNNNNNAGG 1 cut(s) 602
BstFNI CGCG 3 cut(s) 2364, 4108, 4537
BstH2I RGCGCY 1 cut(s) 2752
BstHHI GCGC 6 cut(s) 171, 2297, 2364, 2751, 3864, 4108
BstMWI GCNNNNNNNGC 9 cut(s) 410, 479, 488, 2755, 3376, 3391, 3575, 4050, 4134
BstNI CCWGG 4 cut(s) 1158, 1458, 2811, 3059
BstPAI GACNNNNGTC 1 cut(s) 3805
BstSCI CCNGG 6 cut(s) 106, 1156, 1456, 2809, 3057, 4053
BstSFI CTRYAG 5 cut(s) 411, 885, 1175, 1775, 4510
BstSLI GKGCMC 4 cut(s) 1932, 3325, 4184, 4439
BstSNI TACGTA 1 cut(s) 239
BstUI CGCG 3 cut(s) 2364, 4108, 4537
BstV2I GAAGAC 1 cut(s) 2265
BstXI CCANNNNNNTGG 2 cut(s) 987, 3901
Bsu36I CCTNAGG 1 cut(s) 1293
BsuRI GGCC 6 cut(s) 63, 597, 741, 2604, 3202, 4058
BtgI CCRYGG 2 cut(s) 2525, 3648
BtsI GCAGTG 1 cut(s) 3352
BtsIMutI CAGTG 9 cut(s) 837, 1054, 2278, 2695, 2972, 3352, 3486, 3772, 3824
Cac8I GCNNGC 5 cut(s) 661, 2555, 3770, 4267, 4347
CaiI CAGNNNCTG 2 cut(s) 410, 2123
CciI TCATGA 3 cut(s) 2893, 3250, 3778
CfoI GCGC 6 cut(s) 171, 2297, 2364, 2751, 3864, 4108
Cfr13I GGNCC 6 cut(s) 176, 1043, 1343, 1643, 4056, 4482
CseI GACGC 2 cut(s) 3810, 3863
Csp6I GTAC 6 cut(s) 32, 240, 1007, 3193, 3237, 4527
CspCI CAANNNNNGTGG 2 cut(s) 3853, 3888
CviQI GTAC 6 cut(s) 32, 240, 1007, 3193, 3237, 4527
DinI GGCGCC 1 cut(s) 2750
DraI TTTAAA 3 cut(s) 1638, 2191, 3330
DraIII CACNNNGTG 3 cut(s) 1019, 1319, 1619
DriI GACNNNNNGTC 3 cut(s) 2619, 3547, 4287
EaeI YGGCCR 2 cut(s) 61, 739
Eam1104I CTCTTC 5 cut(s) 847, 2036, 2190, 2437, 3237
Eam1105I GACNNNNNGTC 3 cut(s) 2619, 3547, 4287
EarI CTCTTC 5 cut(s) 847, 2036, 2190, 2437, 3237
Ecl136II GAGCTC 1 cut(s) 2659
Eco105I TACGTA 1 cut(s) 239
Eco130I CCWWGG 3 cut(s) 80, 3504, 3648
Eco147I AGGCCT 1 cut(s) 597
Eco24I GRGCYC 1 cut(s) 2661
Eco31I GGTCTC 4 cut(s) 996, 2354, 2442, 2606
Eco32I GATATC 1 cut(s) 683
Eco47I GGWCC 5 cut(s) 176, 1043, 1343, 1643, 4482
Eco53kI GAGCTC 1 cut(s) 2659
Eco81I CCTNAGG 1 cut(s) 1293
EcoICRI GAGCTC 1 cut(s) 2659
EcoNI CCTNNNNNAGG 1 cut(s) 602
EcoO109I RGGNCCY 1 cut(s) 176
EcoRI GAATTC 2 cut(s) 88, 2915
EcoRII CCWGG 4 cut(s) 1156, 1456, 2809, 3057
EcoRV GATATC 1 cut(s) 683
EcoT14I CCWWGG 3 cut(s) 80, 3504, 3648
EcoT22I ATGCAT 2 cut(s) 475, 585
EcoT38I GRGCYC 1 cut(s) 2661
EgeI GGCGCC 1 cut(s) 2750
EheI GGCGCC 1 cut(s) 2750
ErhI CCWWGG 3 cut(s) 80, 3504, 3648
FalI AAGNNNNNCTT 6 cut(s) 592, 624, 3675, 3707, 3722, 3754
FauNDI CATATG 2 cut(s) 66, 3311
FbaI TGATCA 2 cut(s) 2239, 4156
FblI GTMKAC 1 cut(s) 3750
FriOI GRGCYC 1 cut(s) 2661
FspAI RTGCGCAY 1 cut(s) 2296
FspBI CTAG 4 cut(s) 444, 1986, 2387, 4266
FspI TGCGCA 1 cut(s) 2296
GlaI GCGC 6 cut(s) 170, 2296, 2363, 2750, 3863, 4107
GsuI CTGGAG 6 cut(s) 376, 877, 987, 1179, 1479, 3243
HaeII RGCGCY 1 cut(s) 2752
HaeIII GGCC 6 cut(s) 63, 597, 741, 2604, 3202, 4058
HapII CCGG 4 cut(s) 107, 961, 4054, 4485
HgaI GACGC 2 cut(s) 3810, 3863
HhaI GCGC 6 cut(s) 171, 2297, 2364, 2751, 3864, 4108
Hin1I GRCGYC 1 cut(s) 2749
Hin6I GCGC 6 cut(s) 169, 2295, 2362, 2749, 3862, 4106
HinP1I GCGC 6 cut(s) 169, 2295, 2362, 2749, 3862, 4106
HincII GTYRAC 6 cut(s) 398, 502, 1253, 3751, 4248, 4292
HindII GTYRAC 6 cut(s) 398, 502, 1253, 3751, 4248, 4292
HpaI GTTAAC 1 cut(s) 502
HpaII CCGG 4 cut(s) 107, 961, 4054, 4485
HphI GGTGA 6 cut(s) 542, 2947, 3137, 3347, 3551, 3824
Hpy99I CGWCG 1 cut(s) 3804
HpyCH4IV ACGT 5 cut(s) 124, 238, 1878, 3239, 3302
HpyF10VI GCNNNNNNNGC 9 cut(s) 410, 479, 488, 2755, 3376, 3391, 3575, 4050, 4134
HpySE526I ACGT 5 cut(s) 124, 238, 1878, 3239, 3302
Hsp92I GRCGYC 1 cut(s) 2749
HspAI GCGC 6 cut(s) 169, 2295, 2362, 2749, 3862, 4106
KasI GGCGCC 1 cut(s) 2748
Kpn2I TCCGGA 1 cut(s) 4484
Ksp22I TGATCA 2 cut(s) 2239, 4156
KspAI GTTAAC 1 cut(s) 502
LguI GCTCTTC 1 cut(s) 3237
MaeI CTAG 4 cut(s) 444, 1986, 2387, 4266
MaeII ACGT 5 cut(s) 124, 238, 1878, 3239, 3302
MbiI CCGCTC 1 cut(s) 2816
MlsI TGGCCA 2 cut(s) 63, 741
MluNI TGGCCA 2 cut(s) 63, 741
Mly113I GGCGCC 1 cut(s) 2749
MlyI GAGTC 6 cut(s) 88, 449, 2114, 2733, 4243, 4297
MmeI TCCRAC 2 cut(s) 727, 896
Mox20I TGGCCA 2 cut(s) 63, 741
Mph1103I ATGCAT 2 cut(s) 475, 585
MroI TCCGGA 1 cut(s) 4484
MroXI GAANNNNTTC 2 cut(s) 2045, 3231
MscI TGGCCA 2 cut(s) 63, 741
MslI CAYNNNNRTG 5 cut(s) 985, 3777, 3837, 3899, 4143
Msp20I TGGCCA 2 cut(s) 63, 741
MspA1I CMGCKG 1 cut(s) 3431
MspI CCGG 4 cut(s) 107, 961, 4054, 4485
MspR9I CCNGG 6 cut(s) 108, 1158, 1458, 2811, 3059, 4055
Mva1269I GAATGC 3 cut(s) 473, 793, 4498
MvaI CCWGG 4 cut(s) 1158, 1458, 2811, 3059
MvnI CGCG 3 cut(s) 2364, 4108, 4537
MwoI GCNNNNNNNGC 9 cut(s) 410, 479, 488, 2755, 3376, 3391, 3575, 4050, 4134
NarI GGCGCC 1 cut(s) 2749
NciI CCSGG 2 cut(s) 108, 4055
NcoI CCATGG 1 cut(s) 3648
NdeI CATATG 2 cut(s) 66, 3311
NheI GCTAGC 1 cut(s) 4265
NmuCI GTSAC 8 cut(s) 1011, 1311, 1611, 2720, 3143, 3217, 3452, 3539
NsbI TGCGCA 1 cut(s) 2296
NsiI ATGCAT 2 cut(s) 475, 585
NspV TTCGAA 1 cut(s) 3974
OliI CACNNNNGTG 1 cut(s) 3837
PaeI GCATGC 2 cut(s) 663, 4349
PagI TCATGA 3 cut(s) 2893, 3250, 3778
PceI AGGCCT 1 cut(s) 597
PciI ACATGT 4 cut(s) 865, 1386, 3910, 4355
PciSI GCTCTTC 1 cut(s) 3237
PctI GAATGC 3 cut(s) 473, 793, 4498
PdmI GAANNNNTTC 2 cut(s) 2045, 3231
Pfl23II CGTACG 1 cut(s) 3236
PflMI CCANNNNNTGG 1 cut(s) 1726
PfoI TCCNGGA 3 cut(s) 1156, 1456, 2809
PleI GAGTC 6 cut(s) 88, 449, 2114, 2733, 4243, 4296
PluTI GGCGCC 1 cut(s) 2752
PpsI GAGTC 6 cut(s) 88, 449, 2114, 2733, 4243, 4296
Ppu21I YACGTR 1 cut(s) 239
PpuMI RGGWCCY 1 cut(s) 176
PscI ACATGT 4 cut(s) 865, 1386, 3910, 4355
PshAI GACNNNNGTC 1 cut(s) 3805
PshBI ATTAAT 2 cut(s) 983, 1206
PsiI TTATAA 1 cut(s) 3743
Psp124BI GAGCTC 1 cut(s) 2661
Psp5II RGGWCCY 1 cut(s) 176
Psp6I CCWGG 4 cut(s) 1156, 1456, 2809, 3057
PspGI CCWGG 4 cut(s) 1156, 1456, 2809, 3057
PspLI CGTACG 1 cut(s) 3236
PspPI GGNCC 6 cut(s) 176, 1043, 1343, 1643, 4056, 4482
PspPPI RGGWCCY 1 cut(s) 176
PstI CTGCAG 3 cut(s) 415, 1179, 1779
PstNI CAGNNNCTG 2 cut(s) 410, 2123
PvuII CAGCTG 1 cut(s) 3431
RsaI GTAC 6 cut(s) 33, 241, 1008, 3194, 3238, 4528
RsaNI GTAC 6 cut(s) 32, 240, 1007, 3193, 3237, 4527
RseI CAYNNNNRTG 5 cut(s) 985, 3777, 3837, 3899, 4143
SacI GAGCTC 1 cut(s) 2661
SalI GTCGAC 1 cut(s) 3749
SapI GCTCTTC 1 cut(s) 3237
Sau96I GGNCC 6 cut(s) 176, 1043, 1343, 1643, 4056, 4482
ScaI AGTACT 1 cut(s) 3194
SchI GAGTC 6 cut(s) 88, 449, 2114, 2733, 4243, 4297
ScrFI CCNGG 6 cut(s) 108, 1158, 1458, 2811, 3059, 4055
SfcI CTRYAG 5 cut(s) 411, 885, 1175, 1775, 4510
SfoI GGCGCC 1 cut(s) 2750
SfuI TTCGAA 1 cut(s) 3974
SinI GGWCC 5 cut(s) 176, 1043, 1343, 1643, 4482
SmiMI CAYNNNNRTG 5 cut(s) 985, 3777, 3837, 3899, 4143
SmlI CTYRAG 8 cut(s) 157, 632, 911, 2660, 2753, 3272, 3989, 4009
SmoI CTYRAG 8 cut(s) 157, 632, 911, 2660, 2753, 3272, 3989, 4009
SnaBI TACGTA 1 cut(s) 239
SphI GCATGC 2 cut(s) 663, 4349
SseBI AGGCCT 1 cut(s) 597
SsiI CCGC 6 cut(s) 190, 278, 2364, 2816, 3397, 4535
SspDI GGCGCC 1 cut(s) 2748
SspI AATATT 1 cut(s) 3789
SspMI CTAG 4 cut(s) 444, 1986, 2387, 4266
SstI GAGCTC 1 cut(s) 2661
StuI AGGCCT 1 cut(s) 597
StyD4I CCNGG 6 cut(s) 106, 1156, 1456, 2809, 3057, 4053
StyI CCWWGG 3 cut(s) 80, 3504, 3648
TaiI ACGT 5 cut(s) 127, 241, 1881, 3242, 3305
TaqI TCGA 9 cut(s) 92, 2039, 2219, 2440, 2784, 3614, 3750, 3974, 4213
TatI WGTACW 3 cut(s) 31, 1006, 3192
TauI GCSGC 2 cut(s) 281, 3400
TscAI CASTG 9 cut(s) 837, 1054, 2278, 2695, 2979, 3359, 3493, 3779, 3824
TseFI GTSAC 8 cut(s) 1011, 1311, 1611, 2720, 3143, 3217, 3452, 3539
Tsp45I GTSAC 8 cut(s) 1011, 1311, 1611, 2720, 3143, 3217, 3452, 3539
TspGWI ACGGA 4 cut(s) 890, 2195, 2342, 2459
TspRI CASTG 9 cut(s) 837, 1054, 2278, 2695, 2979, 3359, 3493, 3779, 3824
Van91I CCANNNNNTGG 1 cut(s) 1726
VneI GTGCAC 1 cut(s) 4435
VpaK11BI GGWCC 5 cut(s) 176, 1043, 1343, 1643, 4482
VspI ATTAAT 2 cut(s) 983, 1206
XagI CCTNNNNNAGG 1 cut(s) 602
XapI RAATTY 6 cut(s) 88, 758, 1446, 1687, 2018, 2915
XmiI GTMKAC 1 cut(s) 3750
XmnI GAANNNNTTC 2 cut(s) 2045, 3231
XspI CTAG 4 cut(s) 444, 1986, 2387, 4266
ZrmI AGTACT 1 cut(s) 3194
Zsp2I ATGCAT 2 cut(s) 475, 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.