pycom17g10360

N-acetyltransferase 9-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0011423
Physical Location & Seq
Reverse (-)
7983456 .. 7985405
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 600 bp
ATGGAGCGAGAGAAGGAGAGAGTGAGCTTGGAGGGAGGGAGAGTGATTCTGGTGCCGTACATGAACGAACATGTCCCAAAATACCACGAGTGGATGAAAGACCCAGCTCTCCTCCAAGCCACTGGCTCCGAGCCCCTCACCCTCGACCAGGAATACCAGATGCAGCTCACCTGGACCCAAGACCCCAACAAGCAGACTTTCATTGTATTGGATAAGCAATTGCTTTTGGGAGAGTTCAGCCATGGAGAGCCCCATGTGGAAGCCATGATAGGTGATGTGAACTTATATATGAATGATCTCGATGATCCACACATGGGAGAGATTGAAATAATGATTGCTGAACCCAGAAGTCGTGGTCAAGGACTTGGAAAGGAATCTGCCTTAATGATGATGGCCTTTGCAATTGAAAATTTGGGAATCCACGTCTTCCGTGCTAAAATTGGGGACCAAAATGGAGCGTCTCTTAGCTTGTTTCGGAAATTGGGCTTTGAGGAGACTTCTCATAGTGAAATCTTCAAAGAGGTGACGTTGGATTTACATGTAACAAAGAACAAGCATGAGGAGCTGCTGCAGATGGGTAGCTTTGTGACTCATACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_3

Protein Analysis

200

Amino Acids

22.72

Weight (kDa)

5.07

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_3 PF13302 14 - 164 6.8e-19 Acetyltransferase (GNAT) domain
Acetyltransf_8 PF13523 22 - 167 8.2e-06 Acetyltransferase (GNAT) domain
Acetyltransf_1 PF00583 55 - 163 2.4e-07 Acetyltransferase (GNAT) family
FR47 PF08445 103 - 169 3.2e-06 FR47-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011423)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G04845 AT2G04845 AT2G04845 AT2G04845 AT2G04845
fragaria_vesca FvH4_6g41300 FvH4_6g41300
malus_domestica MD09G1120700.v1.1
prunus_persica Prupe.3G202800_v2.0.a1
pyrus_communis pycom09g04530 pycom17g10360
rosa_chinensis RchiOBHm_Chr2g0156861
rosa_laevigata RLG00000020947
rosa_multiflora Rmu_sc0009209.1_g000001 Rmu_ssc0000286.1_g000025
rosa_roxburghii Rroxscaffold_2G00092650
rosa_rugosa Rorug02G0456700
rosa_samantha Rh2AG522300 Rh2CG507200
rosa_wichuraiana Rw2G043130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 52
AclWI GGATC 1 cut(s) 299
AcsI RAATTY 1 cut(s) 409
AfaI GTAC 1 cut(s) 59
AfiI CCNNNNNNNGG 2 cut(s) 148, 314
AflIII ACRYGT 2 cut(s) 70, 538
AgsI TTSAA 3 cut(s) 326, 407, 517
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 2 cut(s) 147, 170
AluBI AGCT 6 cut(s) 27, 107, 166, 468, 565, 582
AluI AGCT 6 cut(s) 27, 107, 166, 468, 565, 582
Alw26I GTCTC 2 cut(s) 465, 488
AlwI GGATC 1 cut(s) 299
AoxI GGCC 1 cut(s) 393
ApeKI GCWGC 3 cut(s) 163, 565, 568
ApoI RAATTY 1 cut(s) 409
AspS9I GGNCC 2 cut(s) 174, 445
AsuHPI GGTGA 4 cut(s) 130, 160, 284, 535
AvaII GGWCC 2 cut(s) 174, 445
BanI GGYRCC 1 cut(s) 52
BanII GRGCYC 2 cut(s) 135, 252
BauI CACGAG 1 cut(s) 86
BbsI GAAGAC 1 cut(s) 418
BbvI GCAGC 3 cut(s) 175, 552, 555
BccI CCATC 2 cut(s) 385, 568
BceAI ACGGC 1 cut(s) 40
BciT130I CCWGG 2 cut(s) 149, 172
BcoDI GTCTC 2 cut(s) 465, 488
BfaI CTAG 1 cut(s) 598
BfmI CTRYAG 1 cut(s) 569
BisI GCNGC 3 cut(s) 164, 566, 569
BlsI GCNGC 3 cut(s) 165, 567, 570
Bme1390I CCNGG 2 cut(s) 149, 172
Bme18I GGWCC 2 cut(s) 174, 445
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 2 cut(s) 174, 445
BmiI GGNNCC 4 cut(s) 54, 127, 176, 446
BmrFI CCNGG 2 cut(s) 149, 172
BmsI GCATC 1 cut(s) 150
BpiI GAAGAC 1 cut(s) 418
BsaJI CCNNGG 1 cut(s) 241
BsaXI ACNNNNNCTCC 2 cut(s) 27, 57
Bsc4I CCNNNNNNNGG 2 cut(s) 148, 314
Bse1I ACTGG 1 cut(s) 127
BseBI CCWGG 2 cut(s) 149, 172
BseDI CCNNGG 1 cut(s) 241
BseGI GGATG 1 cut(s) 99
BseLI CCNNNNNNNGG 2 cut(s) 148, 314
BseNI ACTGG 1 cut(s) 127
BseRI GAGGAG 3 cut(s) 101, 506, 575
BseXI GCAGC 3 cut(s) 175, 552, 555
BseYI CCCAGC 1 cut(s) 103
BshFI GGCC 1 cut(s) 395
BshNI GGYRCC 1 cut(s) 52
BslFI GGGAC 2 cut(s) 59, 458
BslI CCNNNNNNNGG 2 cut(s) 148, 314
BsmAI GTCTC 2 cut(s) 465, 488
BsmBI CGTCTC 1 cut(s) 465
BsmFI GGGAC 2 cut(s) 59, 458
BsnI GGCC 1 cut(s) 395
Bsp1286I GDGCHC 2 cut(s) 135, 252
Bsp143I GATC 2 cut(s) 295, 304
Bsp19I CCATGG 1 cut(s) 241
BspANI GGCC 1 cut(s) 395
BspLI GGNNCC 4 cut(s) 54, 127, 176, 446
BspMAI CTGCAG 1 cut(s) 573
BspPI GGATC 1 cut(s) 299
BspT107I GGYRCC 1 cut(s) 52
BsrI ACTGG 1 cut(s) 127
BssECI CCNNGG 1 cut(s) 241
BssMI GATC 2 cut(s) 295, 304
BssSI CACGAG 1 cut(s) 86
BssT1I CCWWGG 1 cut(s) 241
Bst2BI CACGAG 1 cut(s) 86
Bst2UI CCWGG 2 cut(s) 149, 172
BstDEI CTNAG 1 cut(s) 464
BstDSI CCRYGG 1 cut(s) 241
BstENI CCTNNNNNAGG 1 cut(s) 146
BstF5I GGATG 1 cut(s) 99
BstKTI GATC 2 cut(s) 298, 307
BstMAI GTCTC 2 cut(s) 465, 488
BstMBI GATC 2 cut(s) 295, 304
BstMWI GCNNNNNNNGC 1 cut(s) 562
BstNI CCWGG 2 cut(s) 149, 172
BstNSI RCATGY 2 cut(s) 74, 542
BstSCI CCNGG 2 cut(s) 147, 170
BstSFI CTRYAG 1 cut(s) 569
BstV1I GCAGC 3 cut(s) 175, 552, 555
BstV2I GAAGAC 1 cut(s) 418
BstXI CCANNNNNNTGG 1 cut(s) 122
BsuRI GGCC 1 cut(s) 395
BtgI CCRYGG 1 cut(s) 241
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 1 cut(s) 99
BtsIMutI CAGTG 1 cut(s) 120
Cfr13I GGNCC 2 cut(s) 174, 445
CseI GACGC 1 cut(s) 447
Csp6I GTAC 1 cut(s) 58
CviAII CATG 8 cut(s) 61, 71, 242, 254, 265, 313, 539, 557
CviQI GTAC 1 cut(s) 58
DdeI CTNAG 1 cut(s) 464
DpnI GATC 2 cut(s) 297, 306
DpnII GATC 2 cut(s) 295, 304
Eco130I CCWWGG 1 cut(s) 241
Eco24I GRGCYC 2 cut(s) 135, 252
Eco47I GGWCC 2 cut(s) 174, 445
EcoNI CCTNNNNNAGG 1 cut(s) 146
EcoRII CCWGG 2 cut(s) 147, 170
EcoT14I CCWWGG 1 cut(s) 241
EcoT38I GRGCYC 2 cut(s) 135, 252
ErhI CCWWGG 1 cut(s) 241
Esp3I CGTCTC 1 cut(s) 465
FaeI CATG 8 cut(s) 64, 74, 245, 257, 268, 316, 542, 560
FaqI GGGAC 2 cut(s) 59, 458
FatI CATG 8 cut(s) 60, 70, 241, 253, 264, 312, 538, 556
Fnu4HI GCNGC 3 cut(s) 164, 566, 569
FokI GGATG 1 cut(s) 106
FriOI GRGCYC 2 cut(s) 135, 252
Fsp4HI GCNGC 3 cut(s) 164, 566, 569
FspBI CTAG 1 cut(s) 598
GluI GCNGC 3 cut(s) 164, 566, 569
GsaI CCCAGC 1 cut(s) 107
HaeIII GGCC 1 cut(s) 395
HgaI GACGC 1 cut(s) 447
Hin1II CATG 8 cut(s) 64, 74, 245, 257, 268, 316, 542, 560
HinfI GANTC 4 cut(s) 46, 374, 417, 589
HphI GGTGA 4 cut(s) 130, 160, 284, 535
Hpy166II GTNNAC 1 cut(s) 280
Hpy188I TCNGA 2 cut(s) 130, 477
Hpy188III TCNNGA 1 cut(s) 299
Hpy8I GTNNAC 1 cut(s) 280
HpyAV CCTTC 1 cut(s) 7
HpyCH4IV ACGT 2 cut(s) 423, 527
HpyCH4V TGCA 3 cut(s) 163, 401, 571
HpyF10VI GCNNNNNNNGC 1 cut(s) 562
HpyF3I CTNAG 1 cut(s) 464
HpySE526I ACGT 2 cut(s) 423, 527
Hsp92II CATG 8 cut(s) 64, 74, 245, 257, 268, 316, 542, 560
Kzo9I GATC 2 cut(s) 295, 304
LmnI GCTCC 4 cut(s) 4, 131, 455, 562
LpnPI CCDG 9 cut(s) 35, 108, 117, 134, 157, 161, 170, 184, 358
Lsp1109I GCAGC 3 cut(s) 175, 552, 555
LweI GCATC 1 cut(s) 150
MaeI CTAG 1 cut(s) 598
MaeII ACGT 2 cut(s) 423, 527
MaeIII GTNAC 3 cut(s) 523, 541, 586
MalI GATC 2 cut(s) 297, 306
MboI GATC 2 cut(s) 295, 304
MboII GAAGA 2 cut(s) 418, 505
MfeI CAATTG 2 cut(s) 218, 402
MhlI GDGCHC 2 cut(s) 135, 252
MluCI AATT 5 cut(s) 218, 402, 409, 438, 479
MlyI GAGTC 1 cut(s) 583
MmeI TCCRAC 1 cut(s) 510
MnlI CCTC 8 cut(s) 25, 29, 122, 146, 152, 484, 514, 553
MseI TTAA 1 cut(s) 383
MspR9I CCNGG 2 cut(s) 149, 172
MunI CAATTG 2 cut(s) 218, 402
MvaI CCWGG 2 cut(s) 149, 172
MwoI GCNNNNNNNGC 1 cut(s) 562
NcoI CCATGG 1 cut(s) 241
NdeII GATC 2 cut(s) 295, 304
NlaIII CATG 8 cut(s) 64, 74, 245, 257, 268, 316, 542, 560
NlaIV GGNNCC 4 cut(s) 54, 127, 176, 446
NmuCI GTSAC 2 cut(s) 523, 586
NspI RCATGY 2 cut(s) 74, 542
PciI ACATGT 2 cut(s) 70, 538
PfeI GAWTC 3 cut(s) 46, 374, 417
PkrI GCNGC 3 cut(s) 165, 567, 570
PleI GAGTC 1 cut(s) 583
PpsI GAGTC 1 cut(s) 583
PscI ACATGT 2 cut(s) 70, 538
Psp6I CCWGG 2 cut(s) 147, 170
PspFI CCCAGC 1 cut(s) 103
PspGI CCWGG 2 cut(s) 147, 170
PspN4I GGNNCC 4 cut(s) 54, 127, 176, 446
PspPI GGNCC 2 cut(s) 174, 445
PstI CTGCAG 1 cut(s) 573
RsaI GTAC 1 cut(s) 59
RsaNI GTAC 1 cut(s) 58
SaqAI TTAA 1 cut(s) 383
SatI GCNGC 3 cut(s) 164, 566, 569
Sau3AI GATC 2 cut(s) 295, 304
Sau96I GGNCC 2 cut(s) 174, 445
SchI GAGTC 1 cut(s) 583
ScrFI CCNGG 2 cut(s) 149, 172
SduI GDGCHC 2 cut(s) 135, 252
SfaNI GCATC 1 cut(s) 150
SfcI CTRYAG 1 cut(s) 569
SinI GGWCC 2 cut(s) 174, 445
Sse9I AATT 5 cut(s) 218, 402, 409, 438, 479
SspMI CTAG 1 cut(s) 598
StyD4I CCNGG 2 cut(s) 147, 170
StyI CCWWGG 1 cut(s) 241
TaiI ACGT 2 cut(s) 426, 530
TaqI TCGA 2 cut(s) 144, 300
TasI AATT 5 cut(s) 218, 402, 409, 438, 479
TfiI GAWTC 3 cut(s) 46, 374, 417
Tru1I TTAA 1 cut(s) 383
Tru9I TTAA 1 cut(s) 383
TscAI CASTG 1 cut(s) 127
TseFI GTSAC 2 cut(s) 523, 586
TseI GCWGC 3 cut(s) 163, 565, 568
Tsp45I GTSAC 2 cut(s) 523, 586
TspDTI ATGAA 4 cut(s) 77, 110, 190, 305
TspGWI ACGGA 1 cut(s) 419
TspRI CASTG 1 cut(s) 127
VpaK11BI GGWCC 2 cut(s) 174, 445
XagI CCTNNNNNAGG 1 cut(s) 146
XapI RAATTY 1 cut(s) 409
XceI RCATGY 2 cut(s) 74, 542
XspI CTAG 1 cut(s) 598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.