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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1201700.v1.1 MD09G1201800.v1.1 MD17G1181700.v1.1 |
| prunus_persica | Prupe.3G057400_v2.0.a1 |
| pyrus_communis | pycom09g11850 pycom09g11860 pycom17g19140 |
| rosa_chinensis | RchiOBHm_Chr2g0140801 RchiOBHm_Chr2g0140811 |
| rosa_laevigata | RLG00000019898 |
| rosa_multiflora | Rmu_sc0003342.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00104490 |
| rosa_rugosa | Rorug02G0365300 |
| rosa_samantha | Rh2AG416600 Rh2BG426200 Rh2CG402800 Rh2DG436100 |
| rosa_wichuraiana | Rw2G034080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 60 |
| Acc36I | ACCTGC | 1 cut(s) | 1267 |
| AccB1I | GGYRCC | 2 cut(s) | 681, 2062 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 331 |
| AciI | CCGC | 6 cut(s) | 399, 664, 963, 1910, 2213, 2321 |
| AclI | AACGTT | 1 cut(s) | 1899 |
| AclWI | GGATC | 1 cut(s) | 1158 |
| AcsI | RAATTY | 5 cut(s) | 155, 185, 1307, 1450, 1501 |
| AcuI | CTGAAG | 2 cut(s) | 1371, 2242 |
| AcyI | GRCGYC | 2 cut(s) | 682, 1790 |
| AfaI | GTAC | 3 cut(s) | 1141, 1972, 2263 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 331, 1973, 2059 |
| AflIII | ACRYGT | 1 cut(s) | 381 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 604 |
| AhlI | ACTAGT | 1 cut(s) | 1408 |
| AjnI | CCWGG | 1 cut(s) | 2058 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 60, 92, 678, 699, 710, 731, 1527, 1559 |
| Alw26I | GTCTC | 7 cut(s) | 540, 581, 1038, 1235, 1925, 1971, 2025 |
| AlwI | GGATC | 1 cut(s) | 1158 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2195 |
| Ama87I | CYCGRG | 1 cut(s) | 698 |
| AoxI | GGCC | 4 cut(s) | 459, 614, 650, 2050 |
| ApeKI | GCWGC | 4 cut(s) | 401, 1616, 2109, 2206 |
| ApoI | RAATTY | 5 cut(s) | 155, 185, 1307, 1450, 1501 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 739 |
| AspLEI | GCGC | 4 cut(s) | 276, 684, 1276, 2206 |
| AspS9I | GGNCC | 3 cut(s) | 466, 824, 1472 |
| AsuC2I | CCSGG | 3 cut(s) | 145, 626, 2044 |
| AsuHPI | GGTGA | 4 cut(s) | 378, 1247, 1403, 2147 |
| AvaI | CYCGRG | 1 cut(s) | 698 |
| AvaII | GGWCC | 3 cut(s) | 466, 824, 1472 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1428, 1461 |
| BanI | GGYRCC | 2 cut(s) | 681, 2062 |
| BanII | GRGCYC | 2 cut(s) | 150, 356 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 724, 756, 2245, 2277 |
| BbsI | GAAGAC | 3 cut(s) | 600, 1593, 2019 |
| BbvCI | CCTCAGC | 1 cut(s) | 2324 |
| BbvI | GCAGC | 4 cut(s) | 413, 1628, 2121, 2218 |
| BccI | CCATC | 5 cut(s) | 815, 1053, 1067, 1556, 1837 |
| BceAI | ACGGC | 1 cut(s) | 1906 |
| BciT130I | CCWGG | 1 cut(s) | 2060 |
| BclI | TGATCA | 2 cut(s) | 1492, 1710 |
| BcnI | CCSGG | 3 cut(s) | 145, 626, 2044 |
| BcoDI | GTCTC | 7 cut(s) | 540, 581, 1038, 1235, 1925, 1971, 2025 |
| BcuI | ACTAGT | 1 cut(s) | 1408 |
| BfaI | CTAG | 3 cut(s) | 795, 1409, 1968 |
| BfmI | CTRYAG | 2 cut(s) | 347, 1098 |
| BfoI | RGCGCY | 2 cut(s) | 277, 685 |
| BfuAI | ACCTGC | 1 cut(s) | 1267 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 679 |
| BisI | GCNGC | 4 cut(s) | 402, 1617, 2110, 2207 |
| BlsI | GCNGC | 4 cut(s) | 403, 1618, 2111, 2208 |
| Bme1390I | CCNGG | 4 cut(s) | 145, 626, 2044, 2060 |
| Bme18I | GGWCC | 3 cut(s) | 466, 824, 1472 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 604 |
| BmeT110I | CYCGRG | 1 cut(s) | 698 |
| BmgT120I | GGNCC | 3 cut(s) | 466, 824, 1472 |
| BmiI | GGNNCC | 4 cut(s) | 149, 468, 683, 2064 |
| BmrFI | CCNGG | 4 cut(s) | 145, 626, 2044, 2060 |
| BmsI | GCATC | 2 cut(s) | 90, 1790 |
| BpiI | GAAGAC | 3 cut(s) | 600, 1593, 2019 |
| BpmI | CTGGAG | 1 cut(s) | 134 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2324 |
| BpuEI | CTTGAG | 2 cut(s) | 522, 851 |
| BpuMI | CCSGG | 3 cut(s) | 145, 626, 2044 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1491 |
| BsaHI | GRCGYC | 2 cut(s) | 682, 1790 |
| BsaJI | CCNNGG | 8 cut(s) | 414, 462, 647, 1440, 1641, 1785, 2043, 2267 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 331, 1973, 2059 |
| Bse1I | ACTGG | 1 cut(s) | 1700 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1491 |
| BseBI | CCWGG | 1 cut(s) | 2060 |
| BseDI | CCNNGG | 8 cut(s) | 414, 462, 647, 1440, 1641, 1785, 2043, 2267 |
| BseGI | GGATG | 7 cut(s) | 100, 110, 826, 1225, 1273, 1781, 2022 |
| BseJI | GATNNNNATC | 1 cut(s) | 1491 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 331, 1973, 2059 |
| BseMII | CTCAG | 3 cut(s) | 1446, 1920, 2315 |
| BseNI | ACTGG | 1 cut(s) | 1700 |
| BseRI | GAGGAG | 6 cut(s) | 259, 944, 956, 1352, 1718, 1896 |
| BseXI | GCAGC | 4 cut(s) | 413, 1628, 2121, 2218 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1231 |
| BshFI | GGCC | 4 cut(s) | 461, 616, 652, 2052 |
| BshNI | GGYRCC | 2 cut(s) | 681, 2062 |
| BsiEI | CGRYCG | 1 cut(s) | 1231 |
| BsiHKCI | CYCGRG | 1 cut(s) | 698 |
| BsiSI | CCGG | 3 cut(s) | 144, 626, 2043 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 331, 1973, 2059 |
| BsmAI | GTCTC | 7 cut(s) | 540, 581, 1038, 1235, 1925, 1971, 2025 |
| BsmBI | CGTCTC | 2 cut(s) | 1235, 1971 |
| BsmI | GAATGC | 2 cut(s) | 941, 1086 |
| BsnI | GGCC | 4 cut(s) | 461, 616, 652, 2052 |
| BsoBI | CYCGRG | 1 cut(s) | 698 |
| Bsp1286I | GDGCHC | 2 cut(s) | 150, 356 |
| Bsp143I | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| Bsp19I | CCATGG | 2 cut(s) | 1440, 1641 |
| BspACI | CCGC | 6 cut(s) | 399, 664, 963, 1910, 2213, 2321 |
| BspANI | GGCC | 4 cut(s) | 461, 616, 652, 2052 |
| BspCNI | CTCAG | 3 cut(s) | 1447, 1921, 2316 |
| BspHI | TCATGA | 3 cut(s) | 1495, 1719, 2277 |
| BspLI | GGNNCC | 4 cut(s) | 149, 468, 683, 2064 |
| BspMAI | CTGCAG | 1 cut(s) | 351 |
| BspMI | ACCTGC | 1 cut(s) | 1267 |
| BspPI | GGATC | 1 cut(s) | 1158 |
| BspT107I | GGYRCC | 2 cut(s) | 681, 2062 |
| BsrI | ACTGG | 1 cut(s) | 1700 |
| BssECI | CCNNGG | 8 cut(s) | 414, 462, 647, 1440, 1641, 1785, 2043, 2267 |
| BssMI | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| BssNI | GRCGYC | 2 cut(s) | 682, 1790 |
| BssT1I | CCWWGG | 5 cut(s) | 414, 647, 1440, 1641, 1785 |
| Bst2UI | CCWGG | 1 cut(s) | 2060 |
| Bst4CI | ACNGT | 4 cut(s) | 72, 1102, 1936, 2071 |
| Bst6I | CTCTTC | 4 cut(s) | 948, 1233, 1251, 1590 |
| BstACI | GRCGYC | 2 cut(s) | 682, 1790 |
| BstC8I | GCNNGC | 2 cut(s) | 2050, 2211 |
| BstDEI | CTNAG | 4 cut(s) | 442, 1455, 1929, 2324 |
| BstDSI | CCRYGG | 2 cut(s) | 1440, 1641 |
| BstEII | GGTNACC | 1 cut(s) | 628 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1971 |
| BstF5I | GGATG | 7 cut(s) | 100, 110, 826, 1225, 1273, 1781, 2022 |
| BstH2I | RGCGCY | 2 cut(s) | 277, 685 |
| BstHHI | GCGC | 4 cut(s) | 276, 684, 1276, 2206 |
| BstKTI | GATC | 6 cut(s) | 316, 1153, 1263, 1495, 1713, 2333 |
| BstMAI | GTCTC | 7 cut(s) | 540, 581, 1038, 1235, 1925, 1971, 2025 |
| BstMBI | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| BstMCI | CGRYCG | 1 cut(s) | 1231 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 679, 1787, 1918, 2086, 2210, 2343 |
| BstNI | CCWGG | 1 cut(s) | 2060 |
| BstNSI | RCATGY | 2 cut(s) | 385, 1997 |
| BstPI | GGTNACC | 1 cut(s) | 628 |
| BstSCI | CCNGG | 4 cut(s) | 143, 624, 2042, 2058 |
| BstSFI | CTRYAG | 2 cut(s) | 347, 1098 |
| BstV1I | GCAGC | 4 cut(s) | 413, 1628, 2121, 2218 |
| BstV2I | GAAGAC | 3 cut(s) | 600, 1593, 2019 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1612 |
| BsuRI | GGCC | 4 cut(s) | 461, 616, 652, 2052 |
| BtgI | CCRYGG | 2 cut(s) | 1440, 1641 |
| BtgZI | GCGATG | 1 cut(s) | 939 |
| BtsCI | GGATG | 7 cut(s) | 100, 110, 826, 1225, 1273, 1781, 2022 |
| BveI | ACCTGC | 1 cut(s) | 1267 |
| Cac8I | GCNNGC | 2 cut(s) | 2050, 2211 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2195 |
| CciI | TCATGA | 3 cut(s) | 1495, 1719, 2277 |
| CfoI | GCGC | 4 cut(s) | 276, 684, 1276, 2206 |
| Cfr13I | GGNCC | 3 cut(s) | 466, 824, 1472 |
| CseI | GACGC | 2 cut(s) | 1252, 1779 |
| Csp6I | GTAC | 3 cut(s) | 1140, 1971, 2262 |
| CviQI | GTAC | 3 cut(s) | 1140, 1971, 2262 |
| DdeI | CTNAG | 4 cut(s) | 442, 1455, 1929, 2324 |
| DinI | GGCGCC | 1 cut(s) | 683 |
| DpnI | GATC | 6 cut(s) | 315, 1152, 1262, 1494, 1712, 2332 |
| DpnII | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| DraI | TTTAAA | 2 cut(s) | 30, 1680 |
| DriI | GACNNNNNGTC | 1 cut(s) | 604 |
| Eam1104I | CTCTTC | 4 cut(s) | 948, 1233, 1251, 1590 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 604 |
| EarI | CTCTTC | 4 cut(s) | 948, 1233, 1251, 1590 |
| EciI | GGCGGA | 1 cut(s) | 1899 |
| Eco130I | CCWWGG | 5 cut(s) | 414, 647, 1440, 1641, 1785 |
| Eco147I | AGGCCT | 2 cut(s) | 461, 652 |
| Eco24I | GRGCYC | 2 cut(s) | 150, 356 |
| Eco32I | GATATC | 1 cut(s) | 135 |
| Eco47I | GGWCC | 3 cut(s) | 466, 824, 1472 |
| Eco57I | CTGAAG | 2 cut(s) | 1371, 2242 |
| Eco88I | CYCGRG | 1 cut(s) | 698 |
| Eco91I | GGTNACC | 1 cut(s) | 628 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1971 |
| EcoO65I | GGTNACC | 1 cut(s) | 628 |
| EcoRI | GAATTC | 1 cut(s) | 1450 |
| EcoRII | CCWGG | 1 cut(s) | 2058 |
| EcoRV | GATATC | 1 cut(s) | 135 |
| EcoT14I | CCWWGG | 5 cut(s) | 414, 647, 1440, 1641, 1785 |
| EcoT38I | GRGCYC | 2 cut(s) | 150, 356 |
| EgeI | GGCGCC | 1 cut(s) | 683 |
| EheI | GGCGCC | 1 cut(s) | 683 |
| ErhI | CCWWGG | 5 cut(s) | 414, 647, 1440, 1641, 1785 |
| Esp3I | CGTCTC | 2 cut(s) | 1235, 1971 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 425, 457 |
| FauI | CCCGC | 1 cut(s) | 956 |
| FauNDI | CATATG | 2 cut(s) | 619, 1029 |
| FbaI | TGATCA | 2 cut(s) | 1492, 1710 |
| Fnu4HI | GCNGC | 4 cut(s) | 402, 1617, 2110, 2207 |
| FokI | GGATG | 7 cut(s) | 87, 97, 833, 1232, 1280, 1768, 2029 |
| FriOI | GRGCYC | 2 cut(s) | 150, 356 |
| Fsp4HI | GCNGC | 4 cut(s) | 402, 1617, 2110, 2207 |
| FspBI | CTAG | 3 cut(s) | 795, 1409, 1968 |
| GlaI | GCGC | 4 cut(s) | 275, 683, 1275, 2205 |
| GluI | GCNGC | 4 cut(s) | 402, 1617, 2110, 2207 |
| GsuI | CTGGAG | 1 cut(s) | 134 |
| HaeII | RGCGCY | 2 cut(s) | 277, 685 |
| HaeIII | GGCC | 4 cut(s) | 461, 616, 652, 2052 |
| HapII | CCGG | 3 cut(s) | 144, 626, 2043 |
| HgaI | GACGC | 2 cut(s) | 1252, 1779 |
| HhaI | GCGC | 4 cut(s) | 276, 684, 1276, 2206 |
| Hin1I | GRCGYC | 2 cut(s) | 682, 1790 |
| Hin6I | GCGC | 4 cut(s) | 274, 682, 1274, 2204 |
| HinP1I | GCGC | 4 cut(s) | 274, 682, 1274, 2204 |
| HindIII | AAGCTT | 2 cut(s) | 1107, 2254 |
| HinfI | GANTC | 7 cut(s) | 527, 589, 749, 1377, 1457, 1598, 1832 |
| HpaII | CCGG | 3 cut(s) | 144, 626, 2043 |
| HphI | GGTGA | 4 cut(s) | 378, 1247, 1403, 2147 |
| Hpy188III | TCNNGA | 8 cut(s) | 130, 151, 818, 830, 1496, 1720, 2278, 2300 |
| Hpy99I | CGWCG | 4 cut(s) | 1385, 1795, 2071, 2087 |
| HpyCH4III | ACNGT | 4 cut(s) | 72, 1102, 1936, 2071 |
| HpyCH4IV | ACGT | 1 cut(s) | 1899 |
| HpyCH4V | TGCA | 4 cut(s) | 349, 1781, 1943, 2242 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 679, 1787, 1918, 2086, 2210, 2343 |
| HpyF3I | CTNAG | 4 cut(s) | 442, 1455, 1929, 2324 |
| HpySE526I | ACGT | 1 cut(s) | 1899 |
| Hsp92I | GRCGYC | 2 cut(s) | 682, 1790 |
| HspAI | GCGC | 4 cut(s) | 274, 682, 1274, 2204 |
| KasI | GGCGCC | 1 cut(s) | 681 |
| Ksp22I | TGATCA | 2 cut(s) | 1492, 1710 |
| Kzo9I | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| LmnI | GCTCC | 7 cut(s) | 153, 1196, 1339, 1552, 1589, 1705, 2175 |
| Lsp1109I | GCAGC | 4 cut(s) | 413, 1628, 2121, 2218 |
| LweI | GCATC | 2 cut(s) | 90, 1790 |
| MaeI | CTAG | 3 cut(s) | 795, 1409, 1968 |
| MaeII | ACGT | 1 cut(s) | 1899 |
| MaeIII | GTNAC | 6 cut(s) | 384, 628, 784, 902, 2311, 2356 |
| MalI | GATC | 6 cut(s) | 315, 1152, 1262, 1494, 1712, 2332 |
| MboI | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| MhlI | GDGCHC | 2 cut(s) | 150, 356 |
| Mly113I | GGCGCC | 1 cut(s) | 682 |
| MlyI | GAGTC | 4 cut(s) | 536, 583, 1466, 1607 |
| MmeI | TCCRAC | 2 cut(s) | 91, 1525 |
| MroXI | GAANNNNTTC | 1 cut(s) | 739 |
| MseI | TTAA | 5 cut(s) | 29, 983, 1679, 1806, 2117 |
| MslI | CAYNNNNRTG | 3 cut(s) | 819, 1251, 1610 |
| MspA1I | CMGCKG | 3 cut(s) | 1619, 2213, 2323 |
| MspI | CCGG | 3 cut(s) | 144, 626, 2043 |
| MspR9I | CCNGG | 4 cut(s) | 145, 626, 2044, 2060 |
| Mva1269I | GAATGC | 2 cut(s) | 941, 1086 |
| MvaI | CCWGG | 1 cut(s) | 2060 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 679, 1787, 1918, 2086, 2210, 2343 |
| NarI | GGCGCC | 1 cut(s) | 682 |
| NciI | CCSGG | 3 cut(s) | 145, 626, 2044 |
| NcoI | CCATGG | 2 cut(s) | 1440, 1641 |
| NdeI | CATATG | 2 cut(s) | 619, 1029 |
| NdeII | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| NlaIV | GGNNCC | 4 cut(s) | 149, 468, 683, 2064 |
| NmuCI | GTSAC | 3 cut(s) | 384, 902, 2356 |
| NspI | RCATGY | 2 cut(s) | 385, 1997 |
| PagI | TCATGA | 3 cut(s) | 1495, 1719, 2277 |
| PceI | AGGCCT | 2 cut(s) | 461, 652 |
| PciI | ACATGT | 1 cut(s) | 381 |
| PctI | GAATGC | 2 cut(s) | 941, 1086 |
| PdmI | GAANNNNTTC | 1 cut(s) | 739 |
| PfeI | GAWTC | 3 cut(s) | 749, 1377, 1832 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 331 |
| PkrI | GCNGC | 4 cut(s) | 403, 1618, 2111, 2208 |
| PleI | GAGTC | 4 cut(s) | 535, 583, 1465, 1606 |
| PluTI | GGCGCC | 1 cut(s) | 685 |
| PpsI | GAGTC | 4 cut(s) | 535, 583, 1465, 1606 |
| PscI | ACATGT | 1 cut(s) | 381 |
| PsiI | TTATAA | 1 cut(s) | 60 |
| Psp1406I | AACGTT | 1 cut(s) | 1899 |
| Psp6I | CCWGG | 1 cut(s) | 2058 |
| PspEI | GGTNACC | 1 cut(s) | 628 |
| PspGI | CCWGG | 1 cut(s) | 2058 |
| PspN4I | GGNNCC | 4 cut(s) | 149, 468, 683, 2064 |
| PspPI | GGNCC | 3 cut(s) | 466, 824, 1472 |
| PstI | CTGCAG | 1 cut(s) | 351 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2195 |
| PvuII | CAGCTG | 1 cut(s) | 1619 |
| RsaI | GTAC | 3 cut(s) | 1141, 1972, 2263 |
| RsaNI | GTAC | 3 cut(s) | 1140, 1971, 2262 |
| RseI | CAYNNNNRTG | 3 cut(s) | 819, 1251, 1610 |
| SaqAI | TTAA | 5 cut(s) | 29, 983, 1679, 1806, 2117 |
| SatI | GCNGC | 4 cut(s) | 402, 1617, 2110, 2207 |
| Sau3AI | GATC | 6 cut(s) | 313, 1150, 1260, 1492, 1710, 2330 |
| Sau96I | GGNCC | 3 cut(s) | 466, 824, 1472 |
| SchI | GAGTC | 4 cut(s) | 536, 583, 1466, 1607 |
| ScrFI | CCNGG | 4 cut(s) | 145, 626, 2044, 2060 |
| SduI | GDGCHC | 2 cut(s) | 150, 356 |
| SfaNI | GCATC | 2 cut(s) | 90, 1790 |
| SfcI | CTRYAG | 2 cut(s) | 347, 1098 |
| SfoI | GGCGCC | 1 cut(s) | 683 |
| SinI | GGWCC | 3 cut(s) | 466, 824, 1472 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 819, 1251, 1610 |
| SmlI | CTYRAG | 2 cut(s) | 537, 830 |
| SmoI | CTYRAG | 2 cut(s) | 537, 830 |
| SpeI | ACTAGT | 1 cut(s) | 1408 |
| SseBI | AGGCCT | 2 cut(s) | 461, 652 |
| SsiI | CCGC | 6 cut(s) | 399, 664, 963, 1910, 2213, 2321 |
| SspDI | GGCGCC | 1 cut(s) | 681 |
| SspI | AATATT | 1 cut(s) | 320 |
| SspMI | CTAG | 3 cut(s) | 795, 1409, 1968 |
| StuI | AGGCCT | 2 cut(s) | 461, 652 |
| StyD4I | CCNGG | 4 cut(s) | 143, 624, 2042, 2058 |
| StyI | CCWWGG | 5 cut(s) | 414, 647, 1440, 1641, 1785 |
| TaaI | ACNGT | 4 cut(s) | 72, 1102, 1936, 2071 |
| TaiI | ACGT | 1 cut(s) | 1902 |
| TaqI | TCGA | 7 cut(s) | 131, 260, 1231, 1263, 1380, 1727, 2082 |
| TaqII | GACCGA | 2 cut(s) | 1217, 2175 |
| TatI | WGTACW | 1 cut(s) | 1970 |
| TfiI | GAWTC | 3 cut(s) | 749, 1377, 1832 |
| Tru1I | TTAA | 5 cut(s) | 29, 983, 1679, 1806, 2117 |
| Tru9I | TTAA | 5 cut(s) | 29, 983, 1679, 1806, 2117 |
| TseFI | GTSAC | 3 cut(s) | 384, 902, 2356 |
| TseI | GCWGC | 4 cut(s) | 401, 1616, 2109, 2206 |
| Tsp45I | GTSAC | 3 cut(s) | 384, 902, 2356 |
| TspGWI | ACGGA | 3 cut(s) | 256, 1398, 2265 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 331 |
| VpaK11BI | GGWCC | 3 cut(s) | 466, 824, 1472 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1971 |
| XapI | RAATTY | 5 cut(s) | 155, 185, 1307, 1450, 1501 |
| XceI | RCATGY | 2 cut(s) | 385, 1997 |
| XmnI | GAANNNNTTC | 1 cut(s) | 739 |
| XspI | CTAG | 3 cut(s) | 795, 1409, 1968 |