pycom17g19950

PXA domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
18063071 .. 18071020
7950 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3339 bp
ATGAGCACGCAGAGGCAGCAGGTGGCCGTCCGGGACCTCGTTGAGGAAGCCAAGAAGCGGATTGTCTTTCTCGCCATTTGCGTCGTTGGCTTGTCGTACCTTATGTCCTTGACAAGCTCCTCTGTCTGGGTGAACTTGCCTGCTGCTGCCTCGTTGATTGTCATCGTTCGTTATTTGTCACTAGATTATGACATGCGAAGAAAAGCTGCAGCATACAACAGCAAGCCTCCCTCGGCAAATACTACTTCTCAAAACAAACCTATTCAGTGGCCTAAAACTAGTCAAAAGTCTGAGTGGAGAAGGAAAGTTAATTCTCCTGTTGTCGAAGAAGCTATTGATCACTTCACCCGGCATCTAGTTTCTGAGTTTGTGACCGATCTCTGGTATTCTCGTCTAACACCGGATAGACAAGGTCCAGAAGAACTGGCGTGCATTGTGAATGGTGTTCTTGGGGAAATTTCAGCACGCATGAGGAATATAAATCTAATCGATCTTCTCACAAGGGATCTTATTAATCTCATATGCTCTCACTTGGAGCTTTTCCGCATAGCTCAAGCAAAGGTTCAAAAGCAACATTCGGGATTCCTTACGGTTGAAAAACGAGATATGGAAATAAGACTCATCTTGGCTGCTGAAAACAAATTGCACCCTGCTTTATTTTCTGCAGAAGCTGAGCACAAGGTTTTGCAGCATCTGATGGATGGCCTCATTTCTTTCTCGTTCAGGCCTGAAGATCTGCAATGTGCTCTATTCCGTTATATTACCAGAGAACTACTTGCTTGTGCAGTAATGCGACCTGTCCTAAACTTGGCTAGTCCCAGGTTTATTAATGAAAGAATTGAATTGTTGGTCATTAAAATGACCGAGGCTAAAGGTGTTACTGTGGAACAAGAGGCATCTCGATCCAAACAAGAGGGGCCCTCAAAAATATCATCTGATCACTTTTCTAGGTTCTTAGATCCTTCTGTTACTGGTGTTGAACTTGTGCAACTCAAGAATGGCCAGTCCAGAACTGCTATGGAGACACCTGCAACAGCAAATGTAAATGGATCAAAAGATCCATTGCTCTCGGTTGATACTCAATCTTCCCGCTCGTGGAGCACATTGCGAATGAACTCCCTCACTAGCAATGAAAGAGTTATAGAACATAACCAATCAGGAGGAGAATGGGGAGATATGTTAGATCTGATGTCTCGCAGAAAGACTGAAGCCCTTGCTCCTGAAAATTTTGAAAACATGTGGGCAAAAGGGAGAAATTTCAGAAAGAAGGAAGGTGAAATAATTGAGCATTCTTCTGGTGGGAAGTCAGTTACAGTAGATCATTTTATGGAAAAATCTAGGCCCAAAGATAAGGAAAATGTTTCGAAGTTCAATCTTTCTGACAGAGGCAATTGTCAAAACAATTTCCGCCCTGGAGATCAAAACATACCGAATCGCTATCGAGGTTCTTCATATCAGGATGATGATGAAGACGACCACATGCGGTTGGACGAGTTTGATGCAGGAAGCAGTACTTCTTATACTTCTGAAGGTGAAGAAACAGACAGTGTTACAGGTCTTGATTCTCCTGGAACTAAAGTTTGGGATGGTAGAAGTAATAGAAATATGGCAATGTCTCACATTCATCACCCACTTGAAAATTCTGGACGCCATATCAGGAAACGGACCGTTAAAGGGAATCTTCACCTTAACAGATTGTCTAAAACCCAGTCTTTCCACAAAAGATCTAGACCAAGCAACAAGAAAGTGCCGGTTTGGCAAGAGGTAGAGAGAACAAGCTTCTTGTCTGGAGATGGACAAGACATACTTAATTCTCCAAATCGAGATGCAAATATTGACTCTAGCGATGATTCTGACATTGAAAGTTTGGGTAGAATTAACAGTGGGGCAGCCACTTCTTCATCTGCAACTTTACCTTTCACGGATGGTCATAGCCTGAATTTTAATTCCCTGAAAAATTCTACAGTAGTGGATTCTTTTTTCAAGTTGAATTGTGAGGTGTTGGGTGCAAATATTGTGAAGAGTGACTCAAAAACATTTGCCGTTTACTCCATAGCTGTTACGGATGTAAATAATAATAGTTGGTCAATCAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATCGGCGTCTAAAAGAGTTTCCCGAGTACAACCTACACTTGCCACCAAAGCATTTTCTTTCAACTGGTTTGGATTTAGCTGTCATTCAAGAACGATGTAAATCACTTGACCAGTATGTAAAGAAACTTATGCAGCTTCCAAGAGTTTCAGGATCGATTGAAGTTTGGGACTTTCTAAGTGTTGACTCCCAGACTTATCTATTTACAAATTCCTTTTCTATAATCGAAACACTGTCAGTTGACCTAGATGATAAGCCATCTGGAAAAAGCAAAAAGGTTTCAAATTTTGGTGGGCCGGTGACTGATCTGTATTCCTTGAAGAGGGAACAGGGTGCTGGAGTTAAGGGTTCTGCTTTACAACTGAAGAACAATGCTGTGGCAGATGGGTTAAGAGTGAACACAAAAGTTTCTGATTCTCAGGTAAAAAGTCCCGGTAAAGAATTTGGAAAGTCACTCATTAATTCTGGCACTGATTCAAATGCTAGAGCAAAAAAAGATTTATCTTCTGTCACAAACTTGGGTAAGACCATAAAAGGAAGAGAGGAACAAGAATCTGAATTGTTTCTTGATGCTGATAGAGACCCTACACTTCCTACAGAGTGGGTACCTCCAAATTTAAGTGCTCCCATATTAGATTTGGTAGATGTCATTTTTCAGCTCCAAGATGGTGGATGGATCAGGCGGAAAGCTTTTTGGGTGGCCAAACAAATACTACAGCTAGGGATGGGTGATGCCGTCGATGACTGGTTAATAGAGAAAATACAGCTTCTGCGCAAGGGATTGGTGGTTGCTTCTGGGATCAAGCGTGTTGAGCAGATACTGTGGCCTGATGGAATATTTATAACCAAGCATCCAAAGCGAAAACCACCACCACCTACCAACTTATCGCAAAATTCACCTCAGGGTCAGAAGCCTTCTGCAATTTCATCACCTAGGCTTGACGAGCAGCAGCAACAGGAGGCAGATCGACGCGCAAAGTTTGTATATGAACTAATGATTGATCATGCACCTGCCGCTATTGTCGGTCTTGTTGGTAGTAAGGAATATGACAAATGTGCCAAGGATCTCTATTACTTTCTCCAGTCATCTGTTTGTTTGAAGCAACTGGGTTTTGACCTTCTGGAGCTGCTGCTTCTGTCGACATTTCCGGAGATGGATTATGTTTTTAAGCAGTTGCAAGAAGAAAAACATCGATTTGGCGAGTTTAGGGCACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1113

Amino Acids

125.29

Weight (kDa)

8.48

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PXA PF02194 105 - 281 4.2e-40 PXA domain
PX PF00787 691 - 768 2.9e-13 PX domain
Nexin_C PF08628 932 - 1070 1.7e-20 Sorting nexin C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2963
AarI CACCTGC 3 cut(s) 10, 1036, 3139
Acc16I TGCGCA 1 cut(s) 2894
Acc36I ACCTGC 3 cut(s) 10, 1036, 3139
Acc65I GGTACC 1 cut(s) 2725
AccB1I GGYRCC 1 cut(s) 2725
AccBSI CCGCTC 1 cut(s) 1092
AccI GTMKAC 1 cut(s) 3260
AccII CGCG 1 cut(s) 3093
AccIII TCCGGA 1 cut(s) 3268
AciI CCGC 7 cut(s) 58, 544, 1090, 1408, 1483, 2803, 3135
AclWI GGATC 9 cut(s) 513, 897, 953, 1052, 1057, 2281, 2804, 2927, 3192
AcoI YGGCCR 3 cut(s) 24, 1000, 2820
AcuI CTGAAG 4 cut(s) 750, 1227, 1548, 2504
AcyI GRCGYC 2 cut(s) 1648, 2128
AfaI GTAC 4 cut(s) 98, 1513, 2150, 2727
AfiI CCNNNNNNNGG 8 cut(s) 43, 57, 126, 381, 808, 1095, 1674, 2442
AflIII ACRYGT 1 cut(s) 1236
AhlI ACTAGT 1 cut(s) 278
AjnI CCWGG 3 cut(s) 818, 1411, 1567
AjuI GAANNNNNNNTTGG 2 cut(s) 1564, 1596
Alw21I GWGCWC 5 cut(s) 8, 678, 748, 1103, 2746
Alw26I GTCTC 4 cut(s) 1016, 1197, 1620, 2694
AlwI GGATC 9 cut(s) 513, 897, 953, 1052, 1057, 2281, 2804, 2927, 3192
AlwNI CAGNNNCTG 4 cut(s) 671, 694, 2890, 2941
Ama87I CYCGRG 1 cut(s) 2144
Aor13HI TCCGGA 1 cut(s) 3268
ApaI GGGCCC 1 cut(s) 921
AseI ATTAAT 3 cut(s) 513, 828, 2580
Asp700I GAANNNNTTC 1 cut(s) 2682
Asp718I GGTACC 1 cut(s) 2725
AspA2I CCTAGG 1 cut(s) 3053
AspLEI GCGC 2 cut(s) 2895, 3095
AspS9I GGNCC 7 cut(s) 34, 413, 917, 918, 1341, 1665, 2414
AsuC2I CCSGG 3 cut(s) 32, 349, 2553
AsuII TTCGAA 1 cut(s) 1364
AvaI CYCGRG 1 cut(s) 2144
AvaII GGWCC 3 cut(s) 34, 413, 1665
AvrII CCTAGG 1 cut(s) 3053
AxyI CCTNAGG 1 cut(s) 3021
BaeGI GKGCMC 2 cut(s) 921, 3334
BalI TGGCCA 2 cut(s) 1002, 2822
BanI GGYRCC 1 cut(s) 2725
BanII GRGCYC 1 cut(s) 921
BauI CACGAG 1 cut(s) 1093
BbsI GAAGAC 1 cut(s) 1476
Bbv12I GWGCWC 5 cut(s) 8, 678, 748, 1103, 2746
BceAI ACGGC 3 cut(s) 11, 2027, 2840
BcgI CGANNNNNNTGC 2 cut(s) 1481, 1515
BciT130I CCWGG 3 cut(s) 820, 1413, 1569
BclI TGATCA 3 cut(s) 337, 937, 3121
BcnI CCSGG 3 cut(s) 32, 349, 2553
BcoDI GTCTC 4 cut(s) 1016, 1197, 1620, 2694
BcuI ACTAGT 1 cut(s) 278
BfmI CTRYAG 5 cut(s) 207, 663, 1962, 2715, 2834
BfuAI ACCTGC 3 cut(s) 10, 1036, 3139
BglI GCCNNNNNGGC 1 cut(s) 1756
BglII AGATCT 3 cut(s) 733, 1183, 1724
BlnI CCTAGG 1 cut(s) 3053
BlpI GCTNAGC 1 cut(s) 672
BmcAI AGTACT 1 cut(s) 1513
Bme1390I CCNGG 6 cut(s) 32, 349, 820, 1413, 1569, 2553
Bme18I GGWCC 3 cut(s) 34, 413, 1665
BmeT110I CYCGRG 1 cut(s) 2144
BmgT120I GGNCC 7 cut(s) 34, 413, 917, 918, 1341, 1665, 2414
BmiI GGNNCC 4 cut(s) 35, 918, 919, 2727
BmrFI CCNGG 6 cut(s) 32, 349, 820, 1413, 1569, 2553
BmrI ACTGGG 2 cut(s) 1702, 3236
BmsI GCATC 8 cut(s) 361, 700, 905, 1489, 1816, 2680, 2842, 2980
BmuI ACTGGG 2 cut(s) 1702, 3236
BpiI GAAGAC 1 cut(s) 1476
BplI GAGNNNNNCTC 2 cut(s) 905, 937
BpmI CTGGAG 5 cut(s) 1434, 1809, 2478, 3185, 3263
Bpu1102I GCTNAGC 1 cut(s) 672
Bpu14I TTCGAA 1 cut(s) 1364
BpuEI CTTGAG 2 cut(s) 537, 977
BpuMI CCSGG 3 cut(s) 32, 349, 2553
Bsa29I ATCGAT 3 cut(s) 489, 2276, 3313
BsaBI GATNNNNATC 2 cut(s) 161, 2221
BsaHI GRCGYC 2 cut(s) 1648, 2128
BsaI GGTCTC 1 cut(s) 2694
BsaJI CCNNGG 6 cut(s) 231, 818, 864, 1411, 3053, 3180
BsaWI WCCGGW 2 cut(s) 400, 3268
Bsc4I CCNNNNNNNGG 8 cut(s) 43, 57, 126, 381, 808, 1095, 1674, 2442
Bse118I RCCGGY 2 cut(s) 1750, 2416
Bse1I ACTGG 9 cut(s) 429, 976, 1003, 1708, 2191, 2233, 2870, 3202, 3231
Bse21I CCTNAGG 1 cut(s) 3021
Bse3DI GCAATG 5 cut(s) 746, 1061, 1103, 1135, 1617
Bse8I GATNNNNATC 2 cut(s) 161, 2221
BseAI TCCGGA 1 cut(s) 3268
BseBI CCWGG 3 cut(s) 820, 1413, 1569
BseCI ATCGAT 3 cut(s) 489, 2276, 3313
BseDI CCNNGG 6 cut(s) 231, 818, 864, 1411, 3053, 3180
BseGI GGATG 8 cut(s) 706, 1465, 1591, 1930, 2071, 2798, 2850, 2971
BseJI GATNNNNATC 2 cut(s) 161, 2221
BseLI CCNNNNNNNGG 8 cut(s) 43, 57, 126, 381, 808, 1095, 1674, 2442
BseMI GCAATG 5 cut(s) 746, 1061, 1103, 1135, 1617
BseMII CTCAG 5 cut(s) 282, 354, 663, 2552, 3035
BseNI ACTGG 9 cut(s) 429, 976, 1003, 1708, 2191, 2233, 2870, 3202, 3231
BseRI GAGGAG 3 cut(s) 109, 1176, 2129
BseSI GKGCMC 2 cut(s) 921, 3334
BsgI GTGCAG 1 cut(s) 804
Bsh1236I CGCG 1 cut(s) 3093
BshNI GGYRCC 1 cut(s) 2725
BshVI ATCGAT 3 cut(s) 489, 2276, 3313
BsiHKAI GWGCWC 5 cut(s) 8, 678, 748, 1103, 2746
BsiHKCI CYCGRG 1 cut(s) 2144
BsiSI CCGG 7 cut(s) 31, 349, 401, 1751, 2417, 2553, 3269
BslFI GGGAC 4 cut(s) 47, 801, 2303, 2535
BslI CCNNNNNNNGG 8 cut(s) 43, 57, 126, 381, 808, 1095, 1674, 2442
BsmAI GTCTC 4 cut(s) 1016, 1197, 1620, 2694
BsmFI GGGAC 4 cut(s) 47, 801, 2303, 2535
BsmI GAATGC 1 cut(s) 1288
Bso31I GGTCTC 1 cut(s) 2694
BsoBI CYCGRG 1 cut(s) 2144
Bsp119I TTCGAA 1 cut(s) 1364
Bsp120I GGGCCC 1 cut(s) 917
Bsp1286I GDGCHC 7 cut(s) 8, 678, 748, 921, 1103, 2746, 3334
Bsp13I TCCGGA 1 cut(s) 3268
Bsp1720I GCTNAGC 1 cut(s) 672
BspACI CCGC 7 cut(s) 58, 544, 1090, 1408, 1483, 2803, 3135
BspCNI CTCAG 5 cut(s) 283, 355, 664, 2551, 3034
BspDI ATCGAT 3 cut(s) 489, 2276, 3313
BspEI TCCGGA 1 cut(s) 3268
BspFNI CGCG 1 cut(s) 3093
BspLI GGNNCC 4 cut(s) 35, 918, 919, 2727
BspMAI CTGCAG 2 cut(s) 211, 667
BspMI ACCTGC 3 cut(s) 10, 1036, 3139
BspPI GGATC 9 cut(s) 513, 897, 953, 1052, 1057, 2281, 2804, 2927, 3192
BspT104I TTCGAA 1 cut(s) 1364
BspT107I GGYRCC 1 cut(s) 2725
BspTNI GGTCTC 1 cut(s) 2694
BsrBI CCGCTC 1 cut(s) 1092
BsrDI GCAATG 5 cut(s) 746, 1061, 1103, 1135, 1617
BsrFI RCCGGY 2 cut(s) 1750, 2416
BsrI ACTGG 9 cut(s) 429, 976, 1003, 1708, 2191, 2233, 2870, 3202, 3231
BssAI RCCGGY 2 cut(s) 1750, 2416
BssECI CCNNGG 6 cut(s) 231, 818, 864, 1411, 3053, 3180
BssNI GRCGYC 2 cut(s) 1648, 2128
BssSI CACGAG 1 cut(s) 1093
BssT1I CCWWGG 2 cut(s) 3053, 3180
Bst2BI CACGAG 1 cut(s) 1093
Bst2UI CCWGG 3 cut(s) 820, 1413, 1569
Bst4CI ACNGT 9 cut(s) 592, 883, 1315, 1547, 1669, 1883, 1966, 2355, 2943
Bst6I CTCTTC 3 cut(s) 2015, 2435, 2653
BstACI GRCGYC 2 cut(s) 1648, 2128
BstBI TTCGAA 1 cut(s) 1364
BstC8I GCNNGC 5 cut(s) 8, 141, 224, 430, 466
BstDEI CTNAG 7 cut(s) 291, 363, 672, 955, 2297, 2538, 3021
BstENI CCTNNNNNAGG 2 cut(s) 41, 2440
BstF5I GGATG 8 cut(s) 706, 1465, 1591, 1930, 2071, 2798, 2850, 2971
BstFNI CGCG 1 cut(s) 3093
BstHHI GCGC 2 cut(s) 2895, 3095
BstMAI GTCTC 4 cut(s) 1016, 1197, 1620, 2694
BstNI CCWGG 3 cut(s) 820, 1413, 1569
BstNSI RCATGY 3 cut(s) 196, 1240, 1483
BstSCI CCNGG 6 cut(s) 30, 347, 818, 1411, 1567, 2551
BstSFI CTRYAG 5 cut(s) 207, 663, 1962, 2715, 2834
BstSLI GKGCMC 2 cut(s) 921, 3334
BstUI CGCG 1 cut(s) 3093
BstV2I GAAGAC 1 cut(s) 1476
BstX2I RGATCY 7 cut(s) 505, 733, 958, 1057, 1183, 1724, 3184
BstXI CCANNNNNNTGG 1 cut(s) 2789
BstYI RGATCY 7 cut(s) 505, 733, 958, 1057, 1183, 1724, 3184
Bsu15I ATCGAT 3 cut(s) 489, 2276, 3313
Bsu36I CCTNAGG 1 cut(s) 3021
BsuTUI ATCGAT 3 cut(s) 489, 2276, 3313
BtgZI GCGATG 1 cut(s) 1860
BtsCI GGATG 8 cut(s) 706, 1465, 1591, 1930, 2071, 2798, 2850, 2971
BtsIMutI CAGTG 5 cut(s) 272, 1552, 1888, 2351, 2589
BveI ACCTGC 3 cut(s) 10, 1036, 3139
Cac8I GCNNGC 5 cut(s) 8, 141, 224, 430, 466
CaiI CAGNNNCTG 4 cut(s) 671, 694, 2890, 2941
CfoI GCGC 2 cut(s) 2895, 3095
Cfr10I RCCGGY 2 cut(s) 1750, 2416
Cfr13I GGNCC 7 cut(s) 34, 413, 917, 918, 1341, 1665, 2414
ClaI ATCGAT 3 cut(s) 489, 2276, 3313
CpoI CGGWCCG 1 cut(s) 1665
CseI GACGC 4 cut(s) 70, 1656, 2117, 3099
Csp6I GTAC 4 cut(s) 97, 1512, 2149, 2726
CspI CGGWCCG 1 cut(s) 1665
CviAII CATG 5 cut(s) 193, 469, 1237, 1480, 3125
CviQI GTAC 4 cut(s) 97, 1512, 2149, 2726
DdeI CTNAG 7 cut(s) 291, 363, 672, 955, 2297, 2538, 3021
EaeI YGGCCR 3 cut(s) 24, 1000, 2820
Eam1104I CTCTTC 3 cut(s) 2015, 2435, 2653
EarI CTCTTC 3 cut(s) 2015, 2435, 2653
EciI GGCGGA 2 cut(s) 1397, 2818
Eco130I CCWWGG 2 cut(s) 3053, 3180
Eco147I AGGCCT 1 cut(s) 727
Eco24I GRGCYC 1 cut(s) 921
Eco31I GGTCTC 1 cut(s) 2694
Eco47I GGWCC 3 cut(s) 34, 413, 1665
Eco57I CTGAAG 4 cut(s) 750, 1227, 1548, 2504
Eco81I CCTNAGG 1 cut(s) 3021
Eco88I CYCGRG 1 cut(s) 2144
EcoNI CCTNNNNNAGG 2 cut(s) 41, 2440
EcoO109I RGGNCCY 3 cut(s) 34, 917, 918
EcoRII CCWGG 3 cut(s) 818, 1411, 1567
EcoT14I CCWWGG 2 cut(s) 3053, 3180
EcoT38I GRGCYC 1 cut(s) 921
ErhI CCWWGG 2 cut(s) 3053, 3180
FaeI CATG 5 cut(s) 196, 472, 1240, 1483, 3128
FalI AAGNNNNNCTT 6 cut(s) 1498, 1530, 1665, 1697, 1791, 1823
FaqI GGGAC 4 cut(s) 47, 801, 2303, 2535
FatI CATG 5 cut(s) 192, 468, 1236, 1479, 3124
FauI CCCGC 1 cut(s) 1097
FauNDI CATATG 1 cut(s) 521
FbaI TGATCA 3 cut(s) 337, 937, 3121
FblI GTMKAC 1 cut(s) 3260
FokI GGATG 8 cut(s) 713, 1472, 1598, 1937, 2078, 2805, 2857, 2958
FriOI GRGCYC 1 cut(s) 921
FspI TGCGCA 1 cut(s) 2894
GlaI GCGC 2 cut(s) 2894, 3094
GsuI CTGGAG 5 cut(s) 1434, 1809, 2478, 3185, 3263
HapII CCGG 7 cut(s) 31, 349, 401, 1751, 2417, 2553, 3269
HgaI GACGC 4 cut(s) 70, 1656, 2117, 3099
HhaI GCGC 2 cut(s) 2895, 3095
Hin1I GRCGYC 2 cut(s) 1648, 2128
Hin1II CATG 5 cut(s) 196, 472, 1240, 1483, 3128
Hin6I GCGC 2 cut(s) 2893, 3093
HinP1I GCGC 2 cut(s) 2893, 3093
HincII GTYRAC 3 cut(s) 2305, 2362, 3261
HindII GTYRAC 3 cut(s) 2305, 2362, 3261
HindIII AAGCTT 2 cut(s) 1777, 2808
HpaII CCGG 7 cut(s) 31, 349, 401, 1751, 2417, 2553, 3269
Hpy166II GTNNAC 6 cut(s) 133, 2047, 2305, 2362, 2518, 3261
Hpy8I GTNNAC 6 cut(s) 133, 2047, 2305, 2362, 2518, 3261
Hpy99I CGWCG 3 cut(s) 86, 2861, 3093
HpyAV CCTTC 8 cut(s) 294, 972, 1261, 1265, 1523, 2091, 3045, 3248
HpyCH4III ACNGT 9 cut(s) 592, 883, 1315, 1547, 1669, 1883, 1966, 2355, 2943
HpyF3I CTNAG 7 cut(s) 291, 363, 672, 955, 2297, 2538, 3021
Hsp92I GRCGYC 2 cut(s) 1648, 2128
Hsp92II CATG 5 cut(s) 196, 472, 1240, 1483, 3128
HspAI GCGC 2 cut(s) 2893, 3093
Kpn2I TCCGGA 1 cut(s) 3268
KpnI GGTACC 1 cut(s) 2729
Ksp22I TGATCA 3 cut(s) 337, 937, 3121
LmnI GCTCC 8 cut(s) 122, 535, 1098, 1222, 2116, 2749, 2784, 3244
LweI GCATC 8 cut(s) 361, 700, 905, 1489, 1816, 2680, 2842, 2980
MbiI CCGCTC 1 cut(s) 1092
MfeI CAATTG 1 cut(s) 1390
MflI RGATCY 7 cut(s) 505, 733, 958, 1057, 1183, 1724, 3184
MhlI GDGCHC 7 cut(s) 8, 678, 748, 921, 1103, 2746, 3334
MlsI TGGCCA 2 cut(s) 1002, 2822
MluNI TGGCCA 2 cut(s) 1002, 2822
MlyI GAGTC 4 cut(s) 612, 1832, 2021, 2300
MmeI TCCRAC 1 cut(s) 1467
Mox20I TGGCCA 2 cut(s) 1002, 2822
MroI TCCGGA 1 cut(s) 3268
MroXI GAANNNNTTC 1 cut(s) 2682
MscI TGGCCA 2 cut(s) 1002, 2822
MslI CAYNNNNRTG 1 cut(s) 857
Msp20I TGGCCA 2 cut(s) 1002, 2822
MspI CCGG 7 cut(s) 31, 349, 401, 1751, 2417, 2553, 3269
MspR9I CCNGG 6 cut(s) 32, 349, 820, 1413, 1569, 2553
MunI CAATTG 1 cut(s) 1390
Mva1269I GAATGC 1 cut(s) 1288
MvaI CCWGG 3 cut(s) 820, 1413, 1569
MvnI CGCG 1 cut(s) 3093
NciI CCSGG 3 cut(s) 32, 349, 2553
NdeI CATATG 1 cut(s) 521
NlaIII CATG 5 cut(s) 196, 472, 1240, 1483, 3128
NlaIV GGNNCC 4 cut(s) 35, 918, 919, 2727
NmeAIII GCCGAG 1 cut(s) 212
NmuCI GTSAC 6 cut(s) 177, 370, 2024, 2419, 2571, 2629
NsbI TGCGCA 1 cut(s) 2894
NspI RCATGY 3 cut(s) 196, 1240, 1483
NspV TTCGAA 1 cut(s) 1364
PaqCI CACCTGC 3 cut(s) 10, 1036, 3139
PceI AGGCCT 1 cut(s) 727
PciI ACATGT 1 cut(s) 1236
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PctI GAATGC 1 cut(s) 1288
PdmI GAANNNNTTC 1 cut(s) 2682
PfeI GAWTC 9 cut(s) 582, 1432, 1562, 1678, 1850, 1973, 2534, 2594, 2672
PflFI GACNNNGTC 1 cut(s) 411
PfoI TCCNGGA 2 cut(s) 30, 1567
PleI GAGTC 4 cut(s) 612, 1832, 2021, 2300
PpsI GAGTC 4 cut(s) 612, 1832, 2021, 2300
PpuMI RGGWCCY 1 cut(s) 34
PscI ACATGT 1 cut(s) 1236
PshBI ATTAAT 3 cut(s) 513, 828, 2580
PsiI TTATAA 1 cut(s) 2963
Psp5II RGGWCCY 1 cut(s) 34
Psp6I CCWGG 3 cut(s) 818, 1411, 1567
PspGI CCWGG 3 cut(s) 818, 1411, 1567
PspN4I GGNNCC 4 cut(s) 35, 918, 919, 2727
PspOMI GGGCCC 1 cut(s) 917
PspPI GGNCC 7 cut(s) 34, 413, 917, 918, 1341, 1665, 2414
PspPPI RGGWCCY 1 cut(s) 34
PstI CTGCAG 2 cut(s) 211, 667
PstNI CAGNNNCTG 4 cut(s) 671, 694, 2890, 2941
PsuI RGATCY 7 cut(s) 505, 733, 958, 1057, 1183, 1724, 3184
PsyI GACNNNGTC 1 cut(s) 411
RsaI GTAC 4 cut(s) 98, 1513, 2150, 2727
RsaNI GTAC 4 cut(s) 97, 1512, 2149, 2726
RseI CAYNNNNRTG 1 cut(s) 857
Rsr2I CGGWCCG 1 cut(s) 1665
RsrII CGGWCCG 1 cut(s) 1665
SalI GTCGAC 1 cut(s) 3259
Sau96I GGNCC 7 cut(s) 34, 413, 917, 918, 1341, 1665, 2414
ScaI AGTACT 1 cut(s) 1513
SchI GAGTC 4 cut(s) 612, 1832, 2021, 2300
ScrFI CCNGG 6 cut(s) 32, 349, 820, 1413, 1569, 2553
SduI GDGCHC 7 cut(s) 8, 678, 748, 921, 1103, 2746, 3334
SfaNI GCATC 8 cut(s) 361, 700, 905, 1489, 1816, 2680, 2842, 2980
SfcI CTRYAG 5 cut(s) 207, 663, 1962, 2715, 2834
SfuI TTCGAA 1 cut(s) 1364
SinI GGWCC 3 cut(s) 34, 413, 1665
SmiMI CAYNNNNRTG 1 cut(s) 857
SmlI CTYRAG 2 cut(s) 552, 992
SmoI CTYRAG 2 cut(s) 552, 992
SpeI ACTAGT 1 cut(s) 278
SseBI AGGCCT 1 cut(s) 727
SsiI CCGC 7 cut(s) 58, 544, 1090, 1408, 1483, 2803, 3135
SspI AATATT 3 cut(s) 1834, 2014, 2958
StuI AGGCCT 1 cut(s) 727
StyD4I CCNGG 6 cut(s) 30, 347, 818, 1411, 1567, 2551
StyI CCWWGG 2 cut(s) 3053, 3180
TaaI ACNGT 9 cut(s) 592, 883, 1315, 1547, 1669, 1883, 1966, 2355, 2943
TaqII GACCGA 3 cut(s) 389, 878, 3134
TatI WGTACW 2 cut(s) 1511, 2148
TauI GCSGC 1 cut(s) 3137
TfiI GAWTC 9 cut(s) 582, 1432, 1562, 1678, 1850, 1973, 2534, 2594, 2672
TscAI CASTG 5 cut(s) 272, 1552, 1888, 2358, 2596
TseFI GTSAC 6 cut(s) 177, 370, 2024, 2419, 2571, 2629
Tsp45I GTSAC 6 cut(s) 177, 370, 2024, 2419, 2571, 2629
TspDTI ATGAA 9 cut(s) 846, 1127, 1146, 1440, 1482, 1613, 1890, 3036, 3123
TspGWI ACGGA 4 cut(s) 743, 1678, 1937, 2078
TspRI CASTG 5 cut(s) 272, 1552, 1888, 2358, 2596
Tth111I GACNNNGTC 1 cut(s) 411
VpaK11BI GGWCC 3 cut(s) 34, 413, 1665
VspI ATTAAT 3 cut(s) 513, 828, 2580
XagI CCTNNNNNAGG 2 cut(s) 41, 2440
XbaI TCTAGA 1 cut(s) 1727
XceI RCATGY 3 cut(s) 196, 1240, 1483
XcmI CCANNNNNNNNNTGG 2 cut(s) 1015, 2755
XmaJI CCTAGG 1 cut(s) 3053
XmiI GTMKAC 1 cut(s) 3260
XmnI GAANNNNTTC 1 cut(s) 2682
ZrmI AGTACT 1 cut(s) 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.