Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002475.1

Orthogroup ID

OG0005299

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 5472

Gene Structure 5472 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002475.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3256 bp

tgttgttgtttttatttcagtgacaagctccaatgttttggtcaacttgcctgccgctgcttccttgattgtaatccttcgctacttatctctggattatgacatgcgaagaaaagccgcagcatacaacaataaaccacccccagcaaataatgctttccaaaccaaaccaattccattgcctaacacagttggaaagtctgagtggagaagaaaagttaattctcctgttgttgagaaagctatagaacactttaccaggcatctagtttctgagtttgtgacagatctatggtattctcgtctaacaccagataaacaaggtccagaggaactggtgtgcattatcaatagtgtccttggggaactttcagcacgcgtgaggaatataaatctgattgatcttctcacaagggaccttatcaatctcatatgctctcacttggaactttttcgcataacacaagcaaagattccaaagcaacaatcagaattgatgacaattgaaaaacgagatatggaattaagactcgtcttggatgctgaaaacaaattgcaccctgctctattttctgctgaagctgagcacaaggttttgcagcatctgatggatggccttatttctctcacattcaagcgtgaagatctgcagtgcactttgttccgttatattgtcagagagcttcttgcttgtgcagtaatgcgtcctgtcctaaacttggctagtccaaggtttattaatgaaagaattgaacagttggtcataaagatgaacgaatctaaaggtgttaccacgggacaaaaggaatttctatccaaacaagaggagtcgtcgagtatttcatccgatcacttctctaggtacttagacccttctgttacaggtgttgaacttgtgcaattgaaaaatggacagtccagaacttctgcagacagacgtgcagcagaaaatgtgaatggatcaaaagacccattgctttcgattgatactccatcttctcgtccatggaactcattgcgaatgaactcccaaagtatcaatgaaagggttgtagaacagcataactcaggaggagaatggggagacatgttagatctgatatctcgcagaaaggctcaagcccttgctcctgaaaatttagaaaatatgtgggcaaaagggagaaattacagaaagaaggaaggtgaaaattcgatatcagcgcaagtcccaaagggttcttccggagggaagtcgattgcaggggatcatactagggaaagatctaatcccaccgataagcaaaatgtatcgaagctcaatctgacctctcagtcaggatctaccaatcaggttaaagtaaacaactctttccgcccggatggtcaaaacataccgaaccgctcaccaggtgctttgtatgaggaagatgatcaacacagtcctacgaggttggtggagaccgactcagaaagcagtacttcttatacttctgaagatcaagaaagtgacggtgcaacaggtcttgattctcctggaactaaagtttgggatggtagaagtaatagaggtatgactgtatctcacatccatcacccacttgaaaattctgaacgtcatattgcaaaaaagactggtaaagggaatcagcgctttcaaaggtctaggcagaaaaaatctaaaccaagcaataagaagttgcctgtttggcaagaggttgagagaacaagcttcttgtctggagatgggcaggacatactcaaatctttaaaagggcatgcccatattgaggactccagtgatgattctgaaaatgaaaattttggtagaattaacagtggagcagccacttcttcatctgcaccatctgtatctgataattctctgaaaaattctttggcagtggattcttttttcaagttgaaatgtgaggtattgggtgcaaatattgtcaagagtgactgtaaaacatttgctgtatattccatatctgtgacggatgtaaataacaatagttggtcaatcaaaagaagatttcgccattttgaggagctacatcggcgtttaaaagagtttcctcagtataaccttcatttgccaccaaagcattttctgtcaagtggtttggatttacttgttgttcaagaacgatgtaaattgcttgacaaatacttaaaggagcttatgcagcttccaacaatctcagggtccattgaagtttgggacttcttaagtgtcgactcccagacttatttatttacaaattcattttctataatcgaaacactgtcagttggcctagatgataagccatctgaaaagagtaaaagggctttaaatttcggtgagcctgtgattgatccattttcctcgaagagggaacaaattggcattggaattaaggattctactttacaagtgaagaataatgctgttggagatgggctaagattaaatgcaaaaggctcttcttctccggtcaaaaatcctggcaaagattttggaaagccactcaatactcctggcatatgttcaagcactggaggacaaaaacaggcatcttctctcatgaactcaggagagacttcaaaaggaagggaggaacaggaatctgaattgtttcttgacgctgctacagaccctacccttcctatggagtgggtgcctccaaatgtaagtgttccgatattagatttggtagatgtcatttttcagctccaagatggtggatggatcaggcgcaaggctttttgggtggccaaacaaatactacaactagggatgggtgacgcctttgatgactggttaattgagaaaatccagcttttgcgtaagggatcgattgttgcttctgggattaagcgaattgagcagatactctggcctgatggaatatttataagcaagcatccaaagcgacgaccacagccatctacaaatgtaccccaaaattcacctcagggtcagagaccaatagcaatatcatcccctagacttgatgagcagcagcgacaggaagcagatcgacgtgcaaagtttgtttatgaattaatgattgataatgcaccaactggtattgtcagtcttgttggtaccaaggagtatgacaaatgtgccaaggatctctattactttcttcagtcatctgtttgcttaaagcaactggcttttgaccttctcgagctactgctttcatctgcatttccagagatggaacatgtatttaagcaggtgcatgaagaaaaacataggtttggtgagttcaaagcacaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nexin_C PX PXA

Protein Analysis

1084

Amino Acids

121.55

Weight (kDa)

8.57

Isoelectric Point (pI)

49.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15240 AT1G15240 AT1G15240 AT1G15240 AT1G15240
fragaria_vesca	FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500
malus_domestica	MD09G1210500.v1.1 MD17G1193500.v1.1
prunus_persica	Prupe.3G068900_v2.0.a1 Prupe.3G068900_v2.0.a1 Prupe.3G068900_v2.0.a1
pyrus_communis	pycom09g12810 pycom17g19950
rosa_chinensis	RchiOBHm_Chr2g0138361
rosa_laevigata	RLG00000019739
rosa_multiflora	Rmu_sc0002475.1_g000001
rosa_roxburghii	Rroxscaffold_2G00106300
rosa_rugosa	Rorug02G0351700
rosa_samantha	Rh2AG400000 Rh2BG408400 Rh2CG386200 Rh2DG419700
rosa_wichuraiana	Rw2G032540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2880
AarI	CACCTGC	1 cut(s)	3200
AasI	GACNNNNNNGTC	1 cut(s)	1313
Acc36I	ACCTGC	1 cut(s)	3200
Acc65I	GGTACC	1 cut(s)	3072
AccB1I	GGYRCC	2 cut(s)	2642, 3072
AccBSI	CCGCTC	1 cut(s)	1384
AccI	GTMKAC	1 cut(s)	2218
AccII	CGCG	1 cut(s)	379
AccIII	TCCGGA	1 cut(s)	1224
AciI	CCGC	4 cut(s)	55, 118, 1355, 1382
AclWI	GGATC	7 cut(s)	968, 1255, 1328, 2334, 2721, 2825, 3109
AcoI	YGGCCR	1 cut(s)	2737
AcsI	RAATTY	9 cut(s)	807, 1136, 1190, 1586, 1799, 1871, 2243, 2318, 2930
AcuI	CTGAAG	3 cut(s)	598, 1495, 3102
AcyI	GRCGYC	1 cut(s)	2770
AdeI	CACNNNGTG	1 cut(s)	1392
AfaI	GTAC	4 cut(s)	864, 1460, 2923, 3074
AfeI	AGCGCT	1 cut(s)	1632
AfiI	CCNNNNNNNGG	5 cut(s)	719, 1769, 2027, 2356, 2633
AflII	CTTAAG	1 cut(s)	2210
AflIII	ACRYGT	3 cut(s)	377, 1087, 3197
AjiI	CACGTC	2 cut(s)	939, 3009
AjnI	CCWGG	5 cut(s)	258, 1388, 1514, 2468, 2501
AjuI	GAANNNNNNNTTGG	6 cut(s)	1205, 1237, 1511, 1543, 1860, 1892
Alw21I	GWGCWC	2 cut(s)	589, 657
Alw26I	GTCTC	4 cut(s)	1078, 1434, 2556, 2942
Alw44I	GTGCAC	1 cut(s)	653
AlwI	GGATC	7 cut(s)	968, 1255, 1328, 2334, 2721, 2825, 3109
AlwNI	CAGNNNCTG	1 cut(s)	605
Ama87I	CYCGRG	1 cut(s)	3159
Aor13HI	TCCGGA	1 cut(s)	1224
Aor51HI	AGCGCT	1 cut(s)	1632
AoxI	GGCC	4 cut(s)	614, 2276, 2737, 2862
ApaLI	GTGCAC	1 cut(s)	653
ApeKI	GCWGC	9 cut(s)	57, 120, 599, 942, 1824, 2168, 2610, 2984, 2987
ApoI	RAATTY	9 cut(s)	807, 1136, 1190, 1586, 1799, 1871, 2243, 2318, 2930
AseI	ATTAAT	2 cut(s)	739, 3030
Asp700I	GAANNNNTTC	2 cut(s)	451, 2599
Asp718I	GGTACC	1 cut(s)	3072
AspLEI	GCGC	3 cut(s)	1205, 1633, 2722
AspS9I	GGNCC	3 cut(s)	324, 416, 2188
AsuC2I	CCSGG	1 cut(s)	1359
AsuHPI	GGTGA	7 cut(s)	1197, 1378, 1566, 2337, 2778, 2926, 3249
AvaI	CYCGRG	1 cut(s)	3159
AvaII	GGWCC	3 cut(s)	324, 416, 2188
AxyI	CCTNAGG	1 cut(s)	2938
BaeGI	GKGCMC	1 cut(s)	657
BaeI	ACNNNNGTAYC	2 cut(s)	2905, 2938
BalI	TGGCCA	1 cut(s)	2739
BanI	GGYRCC	2 cut(s)	2642, 3072
Bbv12I	GWGCWC	2 cut(s)	589, 657
BbvI	GCAGC	9 cut(s)	44, 132, 611, 954, 1836, 2180, 2597, 2996, 2999
BciT130I	CCWGG	5 cut(s)	260, 1390, 1516, 2470, 2503
BclI	TGATCA	1 cut(s)	1412
BcnI	CCSGG	1 cut(s)	1359
BcoDI	GTCTC	4 cut(s)	1078, 1434, 2556, 2942
BfaI	CTAG	8 cut(s)	267, 724, 859, 1255, 1645, 2280, 2757, 2971
BfmI	CTRYAG	4 cut(s)	244, 648, 928, 2614
BfoI	RGCGCY	1 cut(s)	1634
BfrI	CTTAAG	1 cut(s)	2210
BfuAI	ACCTGC	1 cut(s)	3200
BglI	GCCNNNNNGGC	1 cut(s)	1688
BglII	AGATCT	4 cut(s)	287, 644, 1094, 1263
BlpI	GCTNAGC	1 cut(s)	583
BmcAI	AGTACT	1 cut(s)	1460
Bme1390I	CCNGG	6 cut(s)	260, 1359, 1390, 1516, 2470, 2503
Bme18I	GGWCC	3 cut(s)	324, 416, 2188
BmeT110I	CYCGRG	1 cut(s)	3159
BmgBI	CACGTC	2 cut(s)	939, 3009
BmgT120I	GGNCC	3 cut(s)	324, 416, 2188
BmiI	GGNNCC	4 cut(s)	417, 2189, 2644, 3074
BmrFI	CCNGG	6 cut(s)	260, 1359, 1390, 1516, 2470, 2503
BmsI	GCATC	5 cut(s)	272, 530, 611, 2547, 2897
BplI	GAGNNNNNCTC	2 cut(s)	1431, 1463
BpmI	CTGGAG	3 cut(s)	1741, 1760, 2542
Bpu1102I	GCTNAGC	1 cut(s)	583
BpuEI	CTTGAG	1 cut(s)	1102
BpuMI	CCSGG	1 cut(s)	1359
Bsa29I	ATCGAT	1 cut(s)	2820
BsaBI	GATNNNNATC	1 cut(s)	72
BsaHI	GRCGYC	1 cut(s)	2770
BsaI	GGTCTC	2 cut(s)	1434, 2942
BsaJI	CCNNGG	6 cut(s)	359, 729, 793, 1005, 3076, 3097
BsaWI	WCCGGW	2 cut(s)	1224, 2456
Bsc4I	CCNNNNNNNGG	5 cut(s)	719, 1769, 2027, 2356, 2633
Bse1I	ACTGG	7 cut(s)	340, 1619, 1777, 2525, 2787, 3056, 3148
Bse21I	CCTNAGG	1 cut(s)	2938
Bse3DI	GCAATG	3 cut(s)	177, 972, 1014
Bse8I	GATNNNNATC	1 cut(s)	72
BseAI	TCCGGA	1 cut(s)	1224
BseBI	CCWGG	5 cut(s)	260, 1390, 1516, 2470, 2503
BseCI	ATCGAT	1 cut(s)	2820
BseDI	CCNNGG	6 cut(s)	359, 729, 793, 1005, 3076, 3097
BseJI	GATNNNNATC	1 cut(s)	72
BseLI	CCNNNNNNNGG	5 cut(s)	719, 1769, 2027, 2356, 2633
BseMI	GCAATG	3 cut(s)	177, 972, 1014
BseNI	ACTGG	7 cut(s)	340, 1619, 1777, 2525, 2787, 3056, 3148
BseRI	GAGGAG	3 cut(s)	840, 1087, 2043
BseSI	GKGCMC	1 cut(s)	657
BseXI	GCAGC	9 cut(s)	44, 132, 611, 954, 1836, 2180, 2597, 2996, 2999
BseYI	CCCAGC	1 cut(s)	143
BsgI	GTGCAG	3 cut(s)	715, 961, 1825
Bsh1236I	CGCG	1 cut(s)	379
BshFI	GGCC	4 cut(s)	616, 2278, 2739, 2864
BshNI	GGYRCC	2 cut(s)	2642, 3072
BshVI	ATCGAT	1 cut(s)	2820
BsiHKAI	GWGCWC	2 cut(s)	589, 657
BsiHKCI	CYCGRG	1 cut(s)	3159
BsiSI	CCGG	3 cut(s)	1225, 1359, 2457
BslFI	GGGAC	4 cut(s)	429, 811, 1194, 2217
BslI	CCNNNNNNNGG	5 cut(s)	719, 1769, 2027, 2356, 2633
BsmAI	GTCTC	4 cut(s)	1078, 1434, 2556, 2942
BsmFI	GGGAC	4 cut(s)	429, 811, 1194, 2217
BsnI	GGCC	4 cut(s)	616, 2278, 2739, 2864
Bso31I	GGTCTC	2 cut(s)	1434, 2942
BsoBI	CYCGRG	1 cut(s)	3159
Bsp1286I	GDGCHC	2 cut(s)	589, 657
Bsp13I	TCCGGA	1 cut(s)	1224
Bsp1720I	GCTNAGC	1 cut(s)	583
Bsp19I	CCATGG	1 cut(s)	1005
BspACI	CCGC	4 cut(s)	55, 118, 1355, 1382
BspANI	GGCC	4 cut(s)	616, 2278, 2739, 2864
BspDI	ATCGAT	1 cut(s)	2820
BspEI	TCCGGA	1 cut(s)	1224
BspFNI	CGCG	1 cut(s)	379
BspHI	TCATGA	1 cut(s)	2548
BspLI	GGNNCC	4 cut(s)	417, 2189, 2644, 3074
BspMAI	CTGCAG	2 cut(s)	652, 932
BspMI	ACCTGC	1 cut(s)	3200
BspPI	GGATC	7 cut(s)	968, 1255, 1328, 2334, 2721, 2825, 3109
BspQI	GCTCTTC	1 cut(s)	2453
BspT107I	GGYRCC	2 cut(s)	2642, 3072
BspTI	CTTAAG	1 cut(s)	2210
BspTNI	GGTCTC	2 cut(s)	1434, 2942
BsrBI	CCGCTC	1 cut(s)	1384
BsrDI	GCAATG	3 cut(s)	177, 972, 1014
BsrI	ACTGG	7 cut(s)	340, 1619, 1777, 2525, 2787, 3056, 3148
BssECI	CCNNGG	6 cut(s)	359, 729, 793, 1005, 3076, 3097
BssNI	GRCGYC	1 cut(s)	2770
BssT1I	CCWWGG	5 cut(s)	359, 729, 1005, 3076, 3097
Bst2UI	CCWGG	5 cut(s)	260, 1390, 1516, 2470, 2503
Bst4CI	ACNGT	9 cut(s)	191, 757, 916, 1422, 1494, 1559, 1818, 1944, 2269
Bst6I	CTCTTC	2 cut(s)	2349, 2453
BstACI	GRCGYC	1 cut(s)	2770
BstAFI	CTTAAG	1 cut(s)	2210
BstAPI	GCANNNNNTGC	1 cut(s)	153
BstC8I	GCNNGC	4 cut(s)	52, 377, 1759, 2886
BstDSI	CCRYGG	2 cut(s)	793, 1005
BstENI	CCTNNNNNAGG	1 cut(s)	2354
BstFNI	CGCG	1 cut(s)	379
BstH2I	RGCGCY	1 cut(s)	1634
BstHHI	GCGC	3 cut(s)	1205, 1633, 2722
BstMAI	GTCTC	4 cut(s)	1078, 1434, 2556, 2942
BstMWI	GCNNNNNNNGC	7 cut(s)	153, 1688, 2039, 2084, 2168, 2849, 2894
BstNI	CCWGG	5 cut(s)	260, 1390, 1516, 2470, 2503
BstNSI	RCATGY	4 cut(s)	107, 1091, 1761, 3201
BstSCI	CCNGG	6 cut(s)	258, 1357, 1388, 1514, 2468, 2501
BstSFI	CTRYAG	4 cut(s)	244, 648, 928, 2614
BstSLI	GKGCMC	1 cut(s)	657
BstUI	CGCG	1 cut(s)	379
BstV1I	GCAGC	9 cut(s)	44, 132, 611, 954, 1836, 2180, 2597, 2996, 2999
BstX2I	RGATCY	6 cut(s)	287, 644, 1094, 1263, 1320, 3101
BstXI	CCANNNNNNTGG	2 cut(s)	38, 2706
BstYI	RGATCY	6 cut(s)	287, 644, 1094, 1263, 1320, 3101
Bsu15I	ATCGAT	1 cut(s)	2820
Bsu36I	CCTNAGG	1 cut(s)	2938
BsuRI	GGCC	4 cut(s)	616, 2278, 2739, 2864
BsuTUI	ATCGAT	1 cut(s)	2820
BtgI	CCRYGG	2 cut(s)	793, 1005
BtrI	CACGTC	2 cut(s)	939, 3009
BtsI	GCAGTG	2 cut(s)	657, 1888
BtsIMutI	CAGTG	7 cut(s)	25, 657, 1784, 1823, 1888, 2265, 2518
BveI	ACCTGC	1 cut(s)	3200
Cac8I	GCNNGC	4 cut(s)	52, 377, 1759, 2886
CaiI	CAGNNNCTG	1 cut(s)	605
CciI	TCATGA	1 cut(s)	2548
CfoI	GCGC	3 cut(s)	1205, 1633, 2722
Cfr13I	GGNCC	3 cut(s)	324, 416, 2188
ClaI	ATCGAT	1 cut(s)	2820
CseI	GACGC	3 cut(s)	693, 2616, 2778
CsiI	ACCWGGT	1 cut(s)	1388
Csp6I	GTAC	4 cut(s)	863, 1459, 2922, 3073
CviAII	CATG	7 cut(s)	104, 1006, 1088, 1758, 2549, 3198, 3216
CviQI	GTAC	4 cut(s)	863, 1459, 2922, 3073
DraI	TTTAAA	3 cut(s)	1750, 2047, 2317
DraIII	CACNNNGTG	1 cut(s)	1392
DrdI	GACNNNNNNGTC	1 cut(s)	1313
DseDI	GACNNNNNNGTC	1 cut(s)	1313
EaeI	YGGCCR	1 cut(s)	2737
Eam1104I	CTCTTC	2 cut(s)	2349, 2453
EarI	CTCTTC	2 cut(s)	2349, 2453
EciI	GGCGGA	1 cut(s)	1344
Eco130I	CCWWGG	5 cut(s)	359, 729, 1005, 3076, 3097
Eco31I	GGTCTC	2 cut(s)	1434, 2942
Eco32I	GATATC	2 cut(s)	1102, 1198
Eco47I	GGWCC	3 cut(s)	324, 416, 2188
Eco47III	AGCGCT	1 cut(s)	1632
Eco57I	CTGAAG	3 cut(s)	598, 1495, 3102
Eco81I	CCTNAGG	1 cut(s)	2938
Eco88I	CYCGRG	1 cut(s)	3159
EcoNI	CCTNNNNNAGG	1 cut(s)	2354
EcoO109I	RGGNCCY	1 cut(s)	416
EcoRII	CCWGG	5 cut(s)	258, 1388, 1514, 2468, 2501
EcoRV	GATATC	2 cut(s)	1102, 1198
EcoT14I	CCWWGG	5 cut(s)	359, 729, 1005, 3076, 3097
ErhI	CCWWGG	5 cut(s)	359, 729, 1005, 3076, 3097
FaeI	CATG	7 cut(s)	107, 1009, 1091, 1761, 2552, 3201, 3219
FalI	AAGNNNNNCTT	2 cut(s)	1445, 1477
FaqI	GGGAC	4 cut(s)	429, 811, 1194, 2217
FatI	CATG	7 cut(s)	103, 1005, 1087, 1757, 2548, 3197, 3215
FauNDI	CATATG	2 cut(s)	432, 2508
FbaI	TGATCA	1 cut(s)	1412
FblI	GTMKAC	1 cut(s)	2218
FspBI	CTAG	8 cut(s)	267, 724, 859, 1255, 1645, 2280, 2757, 2971
GlaI	GCGC	3 cut(s)	1204, 1632, 2721
GsaI	CCCAGC	1 cut(s)	147
GsuI	CTGGAG	3 cut(s)	1741, 1760, 2542
HaeII	RGCGCY	1 cut(s)	1634
HaeIII	GGCC	4 cut(s)	616, 2278, 2739, 2864
HapII	CCGG	3 cut(s)	1225, 1359, 2457
HgaI	GACGC	3 cut(s)	693, 2616, 2778
HhaI	GCGC	3 cut(s)	1205, 1633, 2722
Hin1I	GRCGYC	1 cut(s)	2770
Hin1II	CATG	7 cut(s)	107, 1009, 1091, 1761, 2552, 3201, 3219
Hin6I	GCGC	3 cut(s)	1203, 1631, 2720
HinP1I	GCGC	3 cut(s)	1203, 1631, 2720
HincII	GTYRAC	2 cut(s)	44, 2219
HindII	GTYRAC	2 cut(s)	44, 2219
HindIII	AAGCTT	1 cut(s)	1709
HpaII	CCGG	3 cut(s)	1225, 1359, 2457
HphI	GGTGA	7 cut(s)	1197, 1378, 1566, 2337, 2778, 2926, 3249
Hpy166II	GTNNAC	4 cut(s)	44, 655, 1343, 2219
Hpy8I	GTNNAC	4 cut(s)	44, 655, 1343, 2219
Hpy99I	CGWCG	3 cut(s)	836, 2902, 3010
HpyAV	CCTTC	8 cut(s)	87, 883, 1172, 1176, 2079, 2569, 2637, 3165
HpyCH4III	ACNGT	9 cut(s)	191, 757, 916, 1422, 1494, 1559, 1818, 1944, 2269
HpyCH4IV	ACGT	3 cut(s)	938, 1595, 3008
HpyF10VI	GCNNNNNNNGC	7 cut(s)	153, 1688, 2039, 2084, 2168, 2849, 2894
HpySE526I	ACGT	3 cut(s)	938, 1595, 3008
Hsp92I	GRCGYC	1 cut(s)	2770
Hsp92II	CATG	7 cut(s)	107, 1009, 1091, 1761, 2552, 3201, 3219
HspAI	GCGC	3 cut(s)	1203, 1631, 2720
Kpn2I	TCCGGA	1 cut(s)	1224
KpnI	GGTACC	1 cut(s)	3076
Ksp22I	TGATCA	1 cut(s)	1412
LguI	GCTCTTC	1 cut(s)	2453
LmnI	GCTCC	6 cut(s)	33, 1133, 1821, 2030, 2159, 2701
Lsp1109I	GCAGC	9 cut(s)	44, 132, 611, 954, 1836, 2180, 2597, 2996, 2999
LweI	GCATC	5 cut(s)	272, 530, 611, 2547, 2897
MabI	ACCWGGT	1 cut(s)	1388
MaeI	CTAG	8 cut(s)	267, 724, 859, 1255, 1645, 2280, 2757, 2971
MaeII	ACGT	3 cut(s)	938, 1595, 3008
MaeIII	GTNAC	8 cut(s)	20, 281, 788, 878, 1488, 1938, 1973, 2766
MbiI	CCGCTC	1 cut(s)	1384
MfeI	CAATTG	2 cut(s)	502, 900
MflI	RGATCY	6 cut(s)	287, 644, 1094, 1263, 1320, 3101
MhlI	GDGCHC	2 cut(s)	589, 657
MlsI	TGGCCA	1 cut(s)	2739
MluI	ACGCGT	1 cut(s)	377
MluNI	TGGCCA	1 cut(s)	2739
MlyI	GAGTC	5 cut(s)	523, 837, 1440, 1767, 2214
MmeI	TCCRAC	3 cut(s)	173, 2199, 2396
Mox20I	TGGCCA	1 cut(s)	2739
MroI	TCCGGA	1 cut(s)	1224
MroXI	GAANNNNTTC	2 cut(s)	451, 2599
MscI	TGGCCA	1 cut(s)	2739
MslI	CAYNNNNRTG	2 cut(s)	768, 1971
Msp20I	TGGCCA	1 cut(s)	2739
MspA1I	CMGCKG	1 cut(s)	57
MspCI	CTTAAG	1 cut(s)	2210
MspI	CCGG	3 cut(s)	1225, 1359, 2457
MspR9I	CCNGG	6 cut(s)	260, 1359, 1390, 1516, 2470, 2503
MunI	CAATTG	2 cut(s)	502, 900
MvaI	CCWGG	5 cut(s)	260, 1390, 1516, 2470, 2503
MvnI	CGCG	1 cut(s)	379
MwoI	GCNNNNNNNGC	7 cut(s)	153, 1688, 2039, 2084, 2168, 2849, 2894
NciI	CCSGG	1 cut(s)	1359
NcoI	CCATGG	1 cut(s)	1005
NdeI	CATATG	2 cut(s)	432, 2508
NlaIII	CATG	7 cut(s)	107, 1009, 1091, 1761, 2552, 3201, 3219
NlaIV	GGNNCC	4 cut(s)	417, 2189, 2644, 3074
NmuCI	GTSAC	6 cut(s)	20, 281, 1488, 1938, 1973, 2766
NspI	RCATGY	4 cut(s)	107, 1091, 1761, 3201
PaeI	GCATGC	1 cut(s)	1761
PaeR7I	CTCGAG	1 cut(s)	3159
PagI	TCATGA	1 cut(s)	2548
PaqCI	CACCTGC	1 cut(s)	3200
PciI	ACATGT	2 cut(s)	1087, 3197
PciSI	GCTCTTC	1 cut(s)	2453
PdmI	GAANNNNTTC	2 cut(s)	451, 2599
PfeI	GAWTC	8 cut(s)	473, 777, 1509, 1625, 1785, 1887, 2385, 2589
PfoI	TCCNGGA	1 cut(s)	1514
PleI	GAGTC	5 cut(s)	523, 836, 1440, 1767, 2214
PpsI	GAGTC	5 cut(s)	523, 836, 1440, 1767, 2214
PpuMI	RGGWCCY	1 cut(s)	416
PscI	ACATGT	2 cut(s)	1087, 3197
PshBI	ATTAAT	2 cut(s)	739, 3030
PsiI	TTATAA	1 cut(s)	2880
Psp5II	RGGWCCY	1 cut(s)	416
Psp6I	CCWGG	5 cut(s)	258, 1388, 1514, 2468, 2501
PspFI	CCCAGC	1 cut(s)	143
PspGI	CCWGG	5 cut(s)	258, 1388, 1514, 2468, 2501
PspN4I	GGNNCC	4 cut(s)	417, 2189, 2644, 3074
PspPI	GGNCC	3 cut(s)	324, 416, 2188
PspPPI	RGGWCCY	1 cut(s)	416
PstI	CTGCAG	2 cut(s)	652, 932
PstNI	CAGNNNCTG	1 cut(s)	605
PsuI	RGATCY	6 cut(s)	287, 644, 1094, 1263, 1320, 3101
RsaI	GTAC	4 cut(s)	864, 1460, 2923, 3074
RsaNI	GTAC	4 cut(s)	863, 1459, 2922, 3073
RseI	CAYNNNNRTG	2 cut(s)	768, 1971
SalI	GTCGAC	1 cut(s)	2217
SapI	GCTCTTC	1 cut(s)	2453
Sau96I	GGNCC	3 cut(s)	324, 416, 2188
ScaI	AGTACT	1 cut(s)	1460
SchI	GAGTC	5 cut(s)	523, 837, 1440, 1767, 2214
ScrFI	CCNGG	6 cut(s)	260, 1359, 1390, 1516, 2470, 2503
SduI	GDGCHC	2 cut(s)	589, 657
SexAI	ACCWGGT	1 cut(s)	1388
SfaNI	GCATC	5 cut(s)	272, 530, 611, 2547, 2897
SfcI	CTRYAG	4 cut(s)	244, 648, 928, 2614
Sfr274I	CTCGAG	1 cut(s)	3159
SinI	GGWCC	3 cut(s)	324, 416, 2188
SlaI	CTCGAG	1 cut(s)	3159
SmiMI	CAYNNNNRTG	2 cut(s)	768, 1971
SmlI	CTYRAG	3 cut(s)	1117, 2210, 3159
SmoI	CTYRAG	3 cut(s)	1117, 2210, 3159
SphI	GCATGC	1 cut(s)	1761
SsiI	CCGC	4 cut(s)	55, 118, 1355, 1382
SspI	AATATT	2 cut(s)	1928, 2875
SspMI	CTAG	8 cut(s)	267, 724, 859, 1255, 1645, 2280, 2757, 2971
StyD4I	CCNGG	6 cut(s)	258, 1357, 1388, 1514, 2468, 2501
StyI	CCWWGG	5 cut(s)	359, 729, 1005, 3076, 3097
TaaI	ACNGT	9 cut(s)	191, 757, 916, 1422, 1494, 1559, 1818, 1944, 2269
TaiI	ACGT	3 cut(s)	941, 1598, 3011
TaqII	GACCGA	1 cut(s)	1458
TatI	WGTACW	1 cut(s)	1458
TauI	GCSGC	2 cut(s)	57, 120
TfiI	GAWTC	8 cut(s)	473, 777, 1509, 1625, 1785, 1887, 2385, 2589
TscAI	CASTG	7 cut(s)	25, 657, 1784, 1823, 1888, 2272, 2525
TseFI	GTSAC	6 cut(s)	20, 281, 1488, 1938, 1973, 2766
TseI	GCWGC	9 cut(s)	57, 120, 599, 942, 1824, 2168, 2610, 2984, 2987
Tsp45I	GTSAC	6 cut(s)	20, 281, 1488, 1938, 1973, 2766
TspGWI	ACGGA	2 cut(s)	654, 1992
TspRI	CASTG	7 cut(s)	25, 657, 1784, 1823, 1888, 2272, 2525
Vha464I	CTTAAG	1 cut(s)	2210
VneI	GTGCAC	1 cut(s)	653
VpaK11BI	GGWCC	3 cut(s)	324, 416, 2188
VspI	ATTAAT	2 cut(s)	739, 3030
XagI	CCTNNNNNAGG	1 cut(s)	2354
XapI	RAATTY	9 cut(s)	807, 1136, 1190, 1586, 1799, 1871, 2243, 2318, 2930
XceI	RCATGY	4 cut(s)	107, 1091, 1761, 3201
XhoI	CTCGAG	1 cut(s)	3159
XmiI	GTMKAC	1 cut(s)	2218
XmnI	GAANNNNTTC	2 cut(s)	451, 2599
XspI	CTAG	8 cut(s)	267, 724, 859, 1255, 1645, 2280, 2757, 2971
ZrmI	AGTACT	1 cut(s)	1460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.