PXA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15240 AT1G15240 AT1G15240 AT1G15240 AT1G15240 |
| fragaria_vesca | FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 FvH4_6g31500 |
| malus_domestica | MD09G1210500.v1.1 MD17G1193500.v1.1 |
| prunus_persica | Prupe.3G068900_v2.0.a1 Prupe.3G068900_v2.0.a1 Prupe.3G068900_v2.0.a1 |
| pyrus_communis | pycom09g12810 pycom17g19950 |
| rosa_chinensis | RchiOBHm_Chr2g0138361 |
| rosa_laevigata | RLG00000019739 |
| rosa_multiflora | Rmu_sc0002475.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00106300 |
| rosa_rugosa | Rorug02G0351700 |
| rosa_samantha | Rh2AG400000 Rh2BG408400 Rh2CG386200 Rh2DG419700 |
| rosa_wichuraiana | Rw2G032540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2969 |
| AarI | CACCTGC | 1 cut(s) | 3289 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1402 |
| Acc36I | ACCTGC | 1 cut(s) | 3289 |
| Acc65I | GGTACC | 1 cut(s) | 3161 |
| AccB1I | GGYRCC | 2 cut(s) | 2731, 3161 |
| AccI | GTMKAC | 1 cut(s) | 2307 |
| AccII | CGCG | 1 cut(s) | 468 |
| AccIII | TCCGGA | 1 cut(s) | 1313 |
| AciI | CCGC | 4 cut(s) | 207, 1444, 1471, 2993 |
| AclWI | GGATC | 7 cut(s) | 1057, 1344, 1417, 2423, 2810, 2914, 3198 |
| AcoI | YGGCCR | 1 cut(s) | 2826 |
| AcuI | CTGAAG | 3 cut(s) | 687, 1584, 3191 |
| AcyI | GRCGYC | 1 cut(s) | 2859 |
| AdeI | CACNNNGTG | 1 cut(s) | 1481 |
| AfaI | GTAC | 4 cut(s) | 7, 953, 1549, 3163 |
| AfeI | AGCGCT | 1 cut(s) | 1721 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 43, 808, 1858, 2116, 2445, 2722 |
| AflII | CTTAAG | 1 cut(s) | 2299 |
| AflIII | ACRYGT | 4 cut(s) | 466, 1176, 2597, 3286 |
| AjiI | CACGTC | 1 cut(s) | 3098 |
| AjnI | CCWGG | 4 cut(s) | 347, 1477, 1603, 2557 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1294, 1326, 1600, 1632, 1949, 1981 |
| Alw21I | GWGCWC | 2 cut(s) | 678, 746 |
| Alw26I | GTCTC | 6 cut(s) | 1167, 1523, 2637, 2645, 3031, 3055 |
| Alw44I | GTGCAC | 1 cut(s) | 742 |
| AlwI | GGATC | 7 cut(s) | 1057, 1344, 1417, 2423, 2810, 2914, 3198 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 694 |
| Ama87I | CYCGRG | 2 cut(s) | 3058, 3248 |
| Aor13HI | TCCGGA | 1 cut(s) | 1313 |
| Aor51HI | AGCGCT | 1 cut(s) | 1721 |
| AoxI | GGCC | 4 cut(s) | 703, 2365, 2826, 2951 |
| ApaLI | GTGCAC | 1 cut(s) | 742 |
| AseI | ATTAAT | 2 cut(s) | 828, 3119 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 540, 2688 |
| Asp718I | GGTACC | 1 cut(s) | 3161 |
| AspLEI | GCGC | 3 cut(s) | 1294, 1722, 2811 |
| AspS9I | GGNCC | 3 cut(s) | 413, 505, 2277 |
| AsuC2I | CCSGG | 1 cut(s) | 1448 |
| AsuHPI | GGTGA | 6 cut(s) | 1286, 1655, 2426, 2867, 3015, 3338 |
| AvaI | CYCGRG | 2 cut(s) | 3058, 3248 |
| AvaII | GGWCC | 3 cut(s) | 413, 505, 2277 |
| AxyI | CCTNAGG | 1 cut(s) | 3027 |
| BaeGI | GKGCMC | 1 cut(s) | 746 |
| BalI | TGGCCA | 1 cut(s) | 2828 |
| BanI | GGYRCC | 2 cut(s) | 2731, 3161 |
| BbsI | GAAGAC | 1 cut(s) | 58 |
| Bbv12I | GWGCWC | 2 cut(s) | 678, 746 |
| BceAI | ACGGC | 1 cut(s) | 59 |
| BciT130I | CCWGG | 4 cut(s) | 349, 1479, 1605, 2559 |
| BclI | TGATCA | 2 cut(s) | 937, 1501 |
| BcnI | CCSGG | 1 cut(s) | 1448 |
| BcoDI | GTCTC | 6 cut(s) | 1167, 1523, 2637, 2645, 3031, 3055 |
| BfaI | CTAG | 7 cut(s) | 356, 813, 948, 1734, 2369, 2592, 2846 |
| BfmI | CTRYAG | 5 cut(s) | 333, 737, 1017, 2703, 3042 |
| BfoI | RGCGCY | 1 cut(s) | 1723 |
| BfrI | CTTAAG | 1 cut(s) | 2299 |
| BfuAI | ACCTGC | 1 cut(s) | 3289 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1777 |
| BglII | AGATCT | 4 cut(s) | 376, 733, 1183, 1352 |
| BlpI | GCTNAGC | 1 cut(s) | 672 |
| BmcAI | AGTACT | 1 cut(s) | 1549 |
| Bme1390I | CCNGG | 5 cut(s) | 349, 1448, 1479, 1605, 2559 |
| Bme18I | GGWCC | 3 cut(s) | 413, 505, 2277 |
| BmeT110I | CYCGRG | 2 cut(s) | 3058, 3248 |
| BmgBI | CACGTC | 1 cut(s) | 3098 |
| BmgT120I | GGNCC | 3 cut(s) | 413, 505, 2277 |
| BmiI | GGNNCC | 4 cut(s) | 506, 2278, 2733, 3163 |
| BmrFI | CCNGG | 5 cut(s) | 349, 1448, 1479, 1605, 2559 |
| BmsI | GCATC | 6 cut(s) | 361, 619, 700, 2636, 2686, 2986 |
| BpiI | GAAGAC | 1 cut(s) | 58 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1520, 1552 |
| BpmI | CTGGAG | 3 cut(s) | 1830, 1849, 2631 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 672 |
| BpuEI | CTTGAG | 1 cut(s) | 1191 |
| BpuMI | CCSGG | 1 cut(s) | 1448 |
| Bsa29I | ATCGAT | 1 cut(s) | 2909 |
| BsaAI | YACGTR | 1 cut(s) | 175 |
| BsaBI | GATNNNNATC | 1 cut(s) | 161 |
| BsaHI | GRCGYC | 1 cut(s) | 2859 |
| BsaI | GGTCTC | 2 cut(s) | 1523, 3031 |
| BsaJI | CCNNGG | 7 cut(s) | 11, 448, 818, 882, 1094, 3165, 3186 |
| BsaWI | WCCGGW | 2 cut(s) | 1313, 2545 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 43, 808, 1858, 2116, 2445, 2722 |
| Bse1I | ACTGG | 6 cut(s) | 429, 1708, 1866, 2614, 2876, 3237 |
| Bse21I | CCTNAGG | 1 cut(s) | 3027 |
| Bse3DI | GCAATG | 3 cut(s) | 266, 1061, 1103 |
| Bse8I | GATNNNNATC | 1 cut(s) | 161 |
| BseAI | TCCGGA | 1 cut(s) | 1313 |
| BseBI | CCWGG | 4 cut(s) | 349, 1479, 1605, 2559 |
| BseCI | ATCGAT | 1 cut(s) | 2909 |
| BseDI | CCNNGG | 7 cut(s) | 11, 448, 818, 882, 1094, 3165, 3186 |
| BseGI | GGATG | 9 cut(s) | 634, 706, 1627, 1656, 2074, 2804, 2856, 2977, 3053 |
| BseJI | GATNNNNATC | 1 cut(s) | 161 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 43, 808, 1858, 2116, 2445, 2722 |
| BseMI | GCAATG | 3 cut(s) | 266, 1061, 1103 |
| BseNI | ACTGG | 6 cut(s) | 429, 1708, 1866, 2614, 2876, 3237 |
| BseRI | GAGGAG | 3 cut(s) | 929, 1176, 2132 |
| BseSI | GKGCMC | 1 cut(s) | 746 |
| BseYI | CCCAGC | 1 cut(s) | 232 |
| BsgI | GTGCAG | 3 cut(s) | 804, 1050, 1914 |
| Bsh1236I | CGCG | 1 cut(s) | 468 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2993 |
| BshFI | GGCC | 4 cut(s) | 705, 2367, 2828, 2953 |
| BshNI | GGYRCC | 2 cut(s) | 2731, 3161 |
| BshVI | ATCGAT | 1 cut(s) | 2909 |
| BsiEI | CGRYCG | 1 cut(s) | 2993 |
| BsiHKAI | GWGCWC | 2 cut(s) | 678, 746 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3058, 3248 |
| BsiSI | CCGG | 3 cut(s) | 1314, 1448, 2546 |
| BslFI | GGGAC | 4 cut(s) | 518, 900, 1283, 2306 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 43, 808, 1858, 2116, 2445, 2722 |
| BsmAI | GTCTC | 6 cut(s) | 1167, 1523, 2637, 2645, 3031, 3055 |
| BsmBI | CGTCTC | 1 cut(s) | 2637 |
| BsmFI | GGGAC | 4 cut(s) | 518, 900, 1283, 2306 |
| BsnI | GGCC | 4 cut(s) | 705, 2367, 2828, 2953 |
| Bso31I | GGTCTC | 2 cut(s) | 1523, 3031 |
| BsoBI | CYCGRG | 2 cut(s) | 3058, 3248 |
| Bsp1286I | GDGCHC | 2 cut(s) | 678, 746 |
| Bsp13I | TCCGGA | 1 cut(s) | 1313 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 672 |
| Bsp19I | CCATGG | 1 cut(s) | 1094 |
| BspACI | CCGC | 4 cut(s) | 207, 1444, 1471, 2993 |
| BspANI | GGCC | 4 cut(s) | 705, 2367, 2828, 2953 |
| BspDI | ATCGAT | 1 cut(s) | 2909 |
| BspEI | TCCGGA | 1 cut(s) | 1313 |
| BspFNI | CGCG | 1 cut(s) | 468 |
| BspHI | TCATGA | 1 cut(s) | 2637 |
| BspLI | GGNNCC | 4 cut(s) | 506, 2278, 2733, 3163 |
| BspMAI | CTGCAG | 2 cut(s) | 741, 1021 |
| BspMI | ACCTGC | 1 cut(s) | 3289 |
| BspPI | GGATC | 7 cut(s) | 1057, 1344, 1417, 2423, 2810, 2914, 3198 |
| BspQI | GCTCTTC | 1 cut(s) | 2542 |
| BspT107I | GGYRCC | 2 cut(s) | 2731, 3161 |
| BspTI | CTTAAG | 1 cut(s) | 2299 |
| BspTNI | GGTCTC | 2 cut(s) | 1523, 3031 |
| BsrDI | GCAATG | 3 cut(s) | 266, 1061, 1103 |
| BsrI | ACTGG | 6 cut(s) | 429, 1708, 1866, 2614, 2876, 3237 |
| BssECI | CCNNGG | 7 cut(s) | 11, 448, 818, 882, 1094, 3165, 3186 |
| BssNI | GRCGYC | 1 cut(s) | 2859 |
| BssT1I | CCWWGG | 6 cut(s) | 11, 448, 818, 1094, 3165, 3186 |
| Bst2UI | CCWGG | 4 cut(s) | 349, 1479, 1605, 2559 |
| Bst4CI | ACNGT | 9 cut(s) | 280, 846, 1005, 1511, 1583, 1648, 1907, 2033, 2358 |
| Bst6I | CTCTTC | 2 cut(s) | 2438, 2542 |
| BstACI | GRCGYC | 1 cut(s) | 2859 |
| BstAFI | CTTAAG | 1 cut(s) | 2299 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 242, 3140 |
| BstBAI | YACGTR | 1 cut(s) | 175 |
| BstC8I | GCNNGC | 4 cut(s) | 141, 466, 1848, 2975 |
| BstDSI | CCRYGG | 2 cut(s) | 882, 1094 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 41, 2443 |
| BstF5I | GGATG | 9 cut(s) | 634, 706, 1627, 1656, 2074, 2804, 2856, 2977, 3053 |
| BstFNI | CGCG | 1 cut(s) | 468 |
| BstH2I | RGCGCY | 1 cut(s) | 1723 |
| BstHHI | GCGC | 3 cut(s) | 1294, 1722, 2811 |
| BstMAI | GTCTC | 6 cut(s) | 1167, 1523, 2637, 2645, 3031, 3055 |
| BstMCI | CGRYCG | 1 cut(s) | 2993 |
| BstNI | CCWGG | 4 cut(s) | 349, 1479, 1605, 2559 |
| BstNSI | RCATGY | 5 cut(s) | 196, 1180, 1850, 2601, 3290 |
| BstSCI | CCNGG | 5 cut(s) | 347, 1446, 1477, 1603, 2557 |
| BstSFI | CTRYAG | 5 cut(s) | 333, 737, 1017, 2703, 3042 |
| BstSLI | GKGCMC | 1 cut(s) | 746 |
| BstSNI | TACGTA | 1 cut(s) | 175 |
| BstUI | CGCG | 1 cut(s) | 468 |
| BstV2I | GAAGAC | 1 cut(s) | 58 |
| BstX2I | RGATCY | 6 cut(s) | 376, 733, 1183, 1352, 1409, 3190 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 127, 2795 |
| BstYI | RGATCY | 6 cut(s) | 376, 733, 1183, 1352, 1409, 3190 |
| Bsu15I | ATCGAT | 1 cut(s) | 2909 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3027 |
| BsuRI | GGCC | 4 cut(s) | 705, 2367, 2828, 2953 |
| BsuTUI | ATCGAT | 1 cut(s) | 2909 |
| BtgI | CCRYGG | 2 cut(s) | 882, 1094 |
| BtrI | CACGTC | 1 cut(s) | 3098 |
| BtsCI | GGATG | 9 cut(s) | 634, 706, 1627, 1656, 2074, 2804, 2856, 2977, 3053 |
| BtsI | GCAGTG | 2 cut(s) | 746, 1977 |
| BtsIMutI | CAGTG | 6 cut(s) | 746, 1873, 1912, 1977, 2354, 2607 |
| BveI | ACCTGC | 1 cut(s) | 3289 |
| Cac8I | GCNNGC | 4 cut(s) | 141, 466, 1848, 2975 |
| CaiI | CAGNNNCTG | 1 cut(s) | 694 |
| CciI | TCATGA | 1 cut(s) | 2637 |
| CfoI | GCGC | 3 cut(s) | 1294, 1722, 2811 |
| Cfr13I | GGNCC | 3 cut(s) | 413, 505, 2277 |
| ClaI | ATCGAT | 1 cut(s) | 2909 |
| CseI | GACGC | 2 cut(s) | 782, 2867 |
| CsiI | ACCWGGT | 1 cut(s) | 1477 |
| Csp6I | GTAC | 4 cut(s) | 6, 952, 1548, 3162 |
| CviAII | CATG | 9 cut(s) | 103, 193, 1095, 1177, 1847, 2598, 2638, 3287, 3305 |
| CviQI | GTAC | 4 cut(s) | 6, 952, 1548, 3162 |
| DraI | TTTAAA | 3 cut(s) | 1839, 2136, 2406 |
| DraIII | CACNNNGTG | 1 cut(s) | 1481 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1402 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1402 |
| EaeI | YGGCCR | 1 cut(s) | 2826 |
| Eam1104I | CTCTTC | 2 cut(s) | 2438, 2542 |
| EarI | CTCTTC | 2 cut(s) | 2438, 2542 |
| EciI | GGCGGA | 1 cut(s) | 1433 |
| Eco105I | TACGTA | 1 cut(s) | 175 |
| Eco130I | CCWWGG | 6 cut(s) | 11, 448, 818, 1094, 3165, 3186 |
| Eco31I | GGTCTC | 2 cut(s) | 1523, 3031 |
| Eco32I | GATATC | 2 cut(s) | 1191, 1287 |
| Eco47I | GGWCC | 3 cut(s) | 413, 505, 2277 |
| Eco47III | AGCGCT | 1 cut(s) | 1721 |
| Eco57I | CTGAAG | 3 cut(s) | 687, 1584, 3191 |
| Eco81I | CCTNAGG | 1 cut(s) | 3027 |
| Eco88I | CYCGRG | 2 cut(s) | 3058, 3248 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 41, 2443 |
| EcoO109I | RGGNCCY | 1 cut(s) | 505 |
| EcoRII | CCWGG | 4 cut(s) | 347, 1477, 1603, 2557 |
| EcoRV | GATATC | 2 cut(s) | 1191, 1287 |
| EcoT14I | CCWWGG | 6 cut(s) | 11, 448, 818, 1094, 3165, 3186 |
| ErhI | CCWWGG | 6 cut(s) | 11, 448, 818, 1094, 3165, 3186 |
| Esp3I | CGTCTC | 1 cut(s) | 2637 |
| FaeI | CATG | 9 cut(s) | 106, 196, 1098, 1180, 1850, 2601, 2641, 3290, 3308 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1534, 1566 |
| FaqI | GGGAC | 4 cut(s) | 518, 900, 1283, 2306 |
| FatI | CATG | 9 cut(s) | 102, 192, 1094, 1176, 1846, 2597, 2637, 3286, 3304 |
| FauNDI | CATATG | 1 cut(s) | 521 |
| FbaI | TGATCA | 2 cut(s) | 937, 1501 |
| FblI | GTMKAC | 1 cut(s) | 2307 |
| FokI | GGATG | 9 cut(s) | 641, 713, 1634, 1643, 2081, 2811, 2863, 2964, 3040 |
| FspBI | CTAG | 7 cut(s) | 356, 813, 948, 1734, 2369, 2592, 2846 |
| GlaI | GCGC | 3 cut(s) | 1293, 1721, 2810 |
| GsaI | CCCAGC | 1 cut(s) | 236 |
| GsuI | CTGGAG | 3 cut(s) | 1830, 1849, 2631 |
| HaeII | RGCGCY | 1 cut(s) | 1723 |
| HaeIII | GGCC | 4 cut(s) | 705, 2367, 2828, 2953 |
| HapII | CCGG | 3 cut(s) | 1314, 1448, 2546 |
| HgaI | GACGC | 2 cut(s) | 782, 2867 |
| HhaI | GCGC | 3 cut(s) | 1294, 1722, 2811 |
| Hin1I | GRCGYC | 1 cut(s) | 2859 |
| Hin1II | CATG | 9 cut(s) | 106, 196, 1098, 1180, 1850, 2601, 2641, 3290, 3308 |
| Hin6I | GCGC | 3 cut(s) | 1292, 1720, 2809 |
| HinP1I | GCGC | 3 cut(s) | 1292, 1720, 2809 |
| HincII | GTYRAC | 2 cut(s) | 133, 2308 |
| HindII | GTYRAC | 2 cut(s) | 133, 2308 |
| HindIII | AAGCTT | 1 cut(s) | 1798 |
| HpaII | CCGG | 3 cut(s) | 1314, 1448, 2546 |
| HphI | GGTGA | 6 cut(s) | 1286, 1655, 2426, 2867, 3015, 3338 |
| Hpy166II | GTNNAC | 5 cut(s) | 133, 744, 1432, 2308, 3112 |
| Hpy8I | GTNNAC | 5 cut(s) | 133, 744, 1432, 2308, 3112 |
| Hpy99I | CGWCG | 2 cut(s) | 2991, 3099 |
| HpyAV | CCTTC | 9 cut(s) | 176, 972, 1261, 1265, 1445, 2168, 2658, 2726, 3254 |
| HpyCH4III | ACNGT | 9 cut(s) | 280, 846, 1005, 1511, 1583, 1648, 1907, 2033, 2358 |
| HpyCH4IV | ACGT | 3 cut(s) | 174, 1684, 3097 |
| HpySE526I | ACGT | 3 cut(s) | 174, 1684, 3097 |
| Hsp92I | GRCGYC | 1 cut(s) | 2859 |
| Hsp92II | CATG | 9 cut(s) | 106, 196, 1098, 1180, 1850, 2601, 2641, 3290, 3308 |
| HspAI | GCGC | 3 cut(s) | 1292, 1720, 2809 |
| Kpn2I | TCCGGA | 1 cut(s) | 1313 |
| KpnI | GGTACC | 1 cut(s) | 3165 |
| Ksp22I | TGATCA | 2 cut(s) | 937, 1501 |
| LguI | GCTCTTC | 1 cut(s) | 2542 |
| LmnI | GCTCC | 6 cut(s) | 122, 1222, 1910, 2119, 2248, 2790 |
| LweI | GCATC | 6 cut(s) | 361, 619, 700, 2636, 2686, 2986 |
| MabI | ACCWGGT | 1 cut(s) | 1477 |
| MaeI | CTAG | 7 cut(s) | 356, 813, 948, 1734, 2369, 2592, 2846 |
| MaeII | ACGT | 3 cut(s) | 174, 1684, 3097 |
| MaeIII | GTNAC | 8 cut(s) | 32, 370, 877, 967, 1577, 2027, 2062, 2855 |
| MfeI | CAATTG | 2 cut(s) | 591, 989 |
| MflI | RGATCY | 6 cut(s) | 376, 733, 1183, 1352, 1409, 3190 |
| MhlI | GDGCHC | 2 cut(s) | 678, 746 |
| MlsI | TGGCCA | 1 cut(s) | 2828 |
| MluI | ACGCGT | 1 cut(s) | 466 |
| MluNI | TGGCCA | 1 cut(s) | 2828 |
| MlyI | GAGTC | 5 cut(s) | 612, 926, 1529, 1856, 2303 |
| MmeI | TCCRAC | 3 cut(s) | 262, 2288, 2485 |
| Mox20I | TGGCCA | 1 cut(s) | 2828 |
| MroI | TCCGGA | 1 cut(s) | 1313 |
| MroXI | GAANNNNTTC | 2 cut(s) | 540, 2688 |
| MscI | TGGCCA | 1 cut(s) | 2828 |
| MslI | CAYNNNNRTG | 2 cut(s) | 857, 2060 |
| Msp20I | TGGCCA | 1 cut(s) | 2828 |
| MspCI | CTTAAG | 1 cut(s) | 2299 |
| MspI | CCGG | 3 cut(s) | 1314, 1448, 2546 |
| MspR9I | CCNGG | 5 cut(s) | 349, 1448, 1479, 1605, 2559 |
| MunI | CAATTG | 2 cut(s) | 591, 989 |
| MvaI | CCWGG | 4 cut(s) | 349, 1479, 1605, 2559 |
| MvnI | CGCG | 1 cut(s) | 468 |
| NciI | CCSGG | 1 cut(s) | 1448 |
| NcoI | CCATGG | 1 cut(s) | 1094 |
| NdeI | CATATG | 1 cut(s) | 521 |
| NlaIII | CATG | 9 cut(s) | 106, 196, 1098, 1180, 1850, 2601, 2641, 3290, 3308 |
| NlaIV | GGNNCC | 4 cut(s) | 506, 2278, 2733, 3163 |
| NmuCI | GTSAC | 6 cut(s) | 32, 370, 1577, 2027, 2062, 2855 |
| NspI | RCATGY | 5 cut(s) | 196, 1180, 1850, 2601, 3290 |
| PaeI | GCATGC | 1 cut(s) | 1850 |
| PaeR7I | CTCGAG | 1 cut(s) | 3248 |
| PagI | TCATGA | 1 cut(s) | 2637 |
| PaqCI | CACCTGC | 1 cut(s) | 3289 |
| PciI | ACATGT | 3 cut(s) | 1176, 2597, 3286 |
| PciSI | GCTCTTC | 1 cut(s) | 2542 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 78 |
| PdmI | GAANNNNTTC | 2 cut(s) | 540, 2688 |
| PfeI | GAWTC | 7 cut(s) | 562, 1598, 1714, 1874, 1976, 2474, 2678 |
| PfoI | TCCNGGA | 1 cut(s) | 1603 |
| PleI | GAGTC | 5 cut(s) | 612, 925, 1529, 1856, 2303 |
| PpsI | GAGTC | 5 cut(s) | 612, 925, 1529, 1856, 2303 |
| Ppu21I | YACGTR | 1 cut(s) | 175 |
| PpuMI | RGGWCCY | 1 cut(s) | 505 |
| PscI | ACATGT | 3 cut(s) | 1176, 2597, 3286 |
| PshBI | ATTAAT | 2 cut(s) | 828, 3119 |
| PsiI | TTATAA | 1 cut(s) | 2969 |
| Psp5II | RGGWCCY | 1 cut(s) | 505 |
| Psp6I | CCWGG | 4 cut(s) | 347, 1477, 1603, 2557 |
| PspFI | CCCAGC | 1 cut(s) | 232 |
| PspGI | CCWGG | 4 cut(s) | 347, 1477, 1603, 2557 |
| PspN4I | GGNNCC | 4 cut(s) | 506, 2278, 2733, 3163 |
| PspPI | GGNCC | 3 cut(s) | 413, 505, 2277 |
| PspPPI | RGGWCCY | 1 cut(s) | 505 |
| PstI | CTGCAG | 2 cut(s) | 741, 1021 |
| PstNI | CAGNNNCTG | 1 cut(s) | 694 |
| PsuI | RGATCY | 6 cut(s) | 376, 733, 1183, 1352, 1409, 3190 |
| RsaI | GTAC | 4 cut(s) | 7, 953, 1549, 3163 |
| RsaNI | GTAC | 4 cut(s) | 6, 952, 1548, 3162 |
| RseI | CAYNNNNRTG | 2 cut(s) | 857, 2060 |
| SalI | GTCGAC | 1 cut(s) | 2306 |
| SapI | GCTCTTC | 1 cut(s) | 2542 |
| Sau96I | GGNCC | 3 cut(s) | 413, 505, 2277 |
| ScaI | AGTACT | 1 cut(s) | 1549 |
| SchI | GAGTC | 5 cut(s) | 612, 926, 1529, 1856, 2303 |
| ScrFI | CCNGG | 5 cut(s) | 349, 1448, 1479, 1605, 2559 |
| SduI | GDGCHC | 2 cut(s) | 678, 746 |
| SexAI | ACCWGGT | 1 cut(s) | 1477 |
| SfaNI | GCATC | 6 cut(s) | 361, 619, 700, 2636, 2686, 2986 |
| SfcI | CTRYAG | 5 cut(s) | 333, 737, 1017, 2703, 3042 |
| Sfr274I | CTCGAG | 1 cut(s) | 3248 |
| SinI | GGWCC | 3 cut(s) | 413, 505, 2277 |
| SlaI | CTCGAG | 1 cut(s) | 3248 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 857, 2060 |
| SmlI | CTYRAG | 3 cut(s) | 1206, 2299, 3248 |
| SmoI | CTYRAG | 3 cut(s) | 1206, 2299, 3248 |
| SnaBI | TACGTA | 1 cut(s) | 175 |
| SphI | GCATGC | 1 cut(s) | 1850 |
| SsiI | CCGC | 4 cut(s) | 207, 1444, 1471, 2993 |
| SspI | AATATT | 2 cut(s) | 2017, 2964 |
| SspMI | CTAG | 7 cut(s) | 356, 813, 948, 1734, 2369, 2592, 2846 |
| StyD4I | CCNGG | 5 cut(s) | 347, 1446, 1477, 1603, 2557 |
| StyI | CCWWGG | 6 cut(s) | 11, 448, 818, 1094, 3165, 3186 |
| TaaI | ACNGT | 9 cut(s) | 280, 846, 1005, 1511, 1583, 1648, 1907, 2033, 2358 |
| TaiI | ACGT | 3 cut(s) | 177, 1687, 3100 |
| TaqII | GACCGA | 1 cut(s) | 1547 |
| TatI | WGTACW | 1 cut(s) | 1547 |
| TauI | GCSGC | 1 cut(s) | 209 |
| TfiI | GAWTC | 7 cut(s) | 562, 1598, 1714, 1874, 1976, 2474, 2678 |
| TscAI | CASTG | 6 cut(s) | 746, 1873, 1912, 1977, 2361, 2614 |
| TseFI | GTSAC | 6 cut(s) | 32, 370, 1577, 2027, 2062, 2855 |
| Tsp45I | GTSAC | 6 cut(s) | 32, 370, 1577, 2027, 2062, 2855 |
| TspGWI | ACGGA | 2 cut(s) | 20, 2081 |
| TspRI | CASTG | 6 cut(s) | 746, 1873, 1912, 1977, 2361, 2614 |
| Vha464I | CTTAAG | 1 cut(s) | 2299 |
| VneI | GTGCAC | 1 cut(s) | 742 |
| VpaK11BI | GGWCC | 3 cut(s) | 413, 505, 2277 |
| VspI | ATTAAT | 2 cut(s) | 828, 3119 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 41, 2443 |
| XceI | RCATGY | 5 cut(s) | 196, 1180, 1850, 2601, 3290 |
| XhoI | CTCGAG | 1 cut(s) | 3248 |
| XmiI | GTMKAC | 1 cut(s) | 2307 |
| XmnI | GAANNNNTTC | 2 cut(s) | 540, 2688 |
| XspI | CTAG | 7 cut(s) | 356, 813, 948, 1734, 2369, 2592, 2846 |
| ZrmI | AGTACT | 1 cut(s) | 1549 |