pycom17g20640

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
19060217 .. 19063166
2950 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1206 bp
ATGACGTGCAGGGGGCTTACTCTTCATTACAAGCTTAGCTTGCCTGGTTCACCACCTCGTTCCTTGTCATCTACTGCGTTTCTTGAACCCAGCTCCCCAAAAATGGCTATAGGGAGGCCAAAACTTGATAGACATCCATTAAGTTTGTTATCAAAAGGCCAAAACCATCTCCACAGGAGCTACAGCAATCAATTTCATGGCTCATCTCTATATGTACCTTTATTGGATGGTTCTATGGTTTCTCCTGTTCTTTCTGAAGAGATTCCTGTCTTGAGACTATCCAATGCTGGCGAAGAGGATGAGAGTAGTACATTAAATTTTGGTACTCTAAACAAAGAAATGGAAGGAAGTGGTCAGTTTGGTATTGTATTAGTGCATGGCTTTGGGGGAGGAGTCTTTTCATGGAGGCATGTGATGGGGGCCCTTTCTCGGCAAGTTGGTTGCACAGTTGCTGCTTTTGATCGCCCTGGTTGGGGCCTAACCTCAAGGCTGCGACCGGAAGATTGGGAGGATAAAGAAATGCCTAATCCTTATAAACTTGAATCTCAGGTTGACCTGCTTCTTTCTTTCTGCTCTGAGATGGGATTTTCCTCAGTGGTGCTTGTTGGTCATGATGATGGAGGCCTTCTGGCTTTGATGGCTGCACAAAAAGTACAAGCATCAGTGAATTCTTTCAACGTTACAATCAAAGGCGTAGTATTGTTAAATGTTAGCTTGTCAAGAGAAGTGGTGCCTGCTTTTGCGAGGATACTCTTGAGAACTTCACTTGGGAAAAAGCACCTGGTTCGTCCATTACTGCGAACAGAAATTACACAAGTAGTAAATAGGCGTGCCTGGTATGATGCGACAAAGTTGACAATGGACGTTTTGAGCCTTTATAAGGCCCCTCTATGTCTAGAAGGATGGGATGAAGCACTCCATGAGATAGGTAGATTGTCATACGAGACACTTCTTTCACCAAAAAATGCAGAATCATTACTGAAGGCAGTTGAAGACATGCCAGTGTTAGTCATCGCTGGCGCTGAGGATGCCCTTGTCTCTCTTAAATCTTCCCAAGCTATGGCTTCCAAACTTGTAAATTCTAGACTAGTAGCGATATCCGGATGTGGCCATCTTCCCCACGAAGAGTGTCCCAAGGCATTACTTGCAGCAATGACACCCTTCTTAAGCAGACTCTTGGGCAAACAAGACATGCAAAGCCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

402

Amino Acids

43.74

Weight (kDa)

7.69

Isoelectric Point (pI)

50.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_6 PF12697 122 - 383 1e-23 Alpha/beta hydrolase family
Abhydrolase_1 PF00561 122 - 376 2.7e-20 alpha/beta hydrolase fold
Hydrolase_4 PF12146 122 - 376 1.2e-08 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 534, 879
Acc36I ACCTGC 1 cut(s) 564
AccB1I GGYRCC 1 cut(s) 730
AccB7I CCANNNNNTGG 1 cut(s) 1060
AccIII TCCGGA 1 cut(s) 1100
AclI AACGTT 1 cut(s) 678
AcoI YGGCCR 1 cut(s) 1108
AcsI RAATTY 3 cut(s) 316, 667, 1078
AcuI CTGAAG 2 cut(s) 276, 1001
AfaI GTAC 4 cut(s) 216, 310, 325, 654
AfiI CCNNNNNNNGG 6 cut(s) 103, 429, 472, 473, 880, 1060
AflII CTTAAG 1 cut(s) 1165
AgsI TTSAA 4 cut(s) 86, 542, 676, 992
AhlI ACTAGT 1 cut(s) 1087
AjiI CACGTC 1 cut(s) 6
AjnI CCWGG 4 cut(s) 43, 466, 780, 833
AluBI AGCT 6 cut(s) 34, 39, 93, 180, 714, 1058
AluI AGCT 6 cut(s) 34, 39, 93, 180, 714, 1058
Alw26I GTCTC 3 cut(s) 268, 938, 1042
AlwNI CAGNNNCTG 1 cut(s) 452
Aor13HI TCCGGA 1 cut(s) 1100
AoxI GGCC 7 cut(s) 116, 157, 420, 475, 622, 882, 1108
ApaI GGGCCC 1 cut(s) 424
ApeKI GCWGC 4 cut(s) 452, 490, 641, 1148
ApoI RAATTY 3 cut(s) 316, 667, 1078
Asp700I GAANNNNTTC 2 cut(s) 261, 671
AspLEI GCGC 1 cut(s) 1022
AspS9I GGNCC 4 cut(s) 420, 421, 475, 883
AsuHPI GGTGA 2 cut(s) 42, 948
BaeGI GKGCMC 1 cut(s) 424
BalI TGGCCA 1 cut(s) 1110
BanI GGYRCC 1 cut(s) 730
BanII GRGCYC 1 cut(s) 424
BbsI GAAGAC 1 cut(s) 999
BbvCI CCTCAGC 1 cut(s) 1023
BbvI GCAGC 4 cut(s) 439, 477, 628, 1160
BccI CCATC 8 cut(s) 174, 221, 409, 574, 611, 631, 897, 1119
BcgI CGANNNNNNTGC 2 cut(s) 767, 801
BciT130I CCWGG 4 cut(s) 45, 468, 782, 835
BciVI GTATCC 1 cut(s) 741
BcoDI GTCTC 3 cut(s) 268, 938, 1042
BcuI ACTAGT 1 cut(s) 1087
BfaI CTAG 3 cut(s) 896, 1083, 1088
BfmI CTRYAG 2 cut(s) 108, 181
BfoI RGCGCY 1 cut(s) 1023
BfrI CTTAAG 1 cut(s) 1165
BfuAI ACCTGC 1 cut(s) 564
BfuI GTATCC 1 cut(s) 741
BisI GCNGC 4 cut(s) 453, 491, 642, 1149
BlpI GCTNAGC 1 cut(s) 35
BlsI GCNGC 4 cut(s) 454, 492, 643, 1150
Bme1390I CCNGG 4 cut(s) 45, 468, 782, 835
BmgBI CACGTC 1 cut(s) 6
BmgT120I GGNCC 4 cut(s) 420, 421, 475, 883
BmiI GGNNCC 5 cut(s) 421, 422, 476, 732, 885
BmrFI CCNGG 4 cut(s) 45, 468, 782, 835
BmsI GCATC 3 cut(s) 668, 832, 1018
BpiI GAAGAC 1 cut(s) 999
Bpu10I CCTNAGC 1 cut(s) 1023
Bpu1102I GCTNAGC 1 cut(s) 35
BpuEI CTTGAG 3 cut(s) 292, 469, 775
BsaBI GATNNNNATC 1 cut(s) 132
BsaJI CCNNGG 2 cut(s) 466, 1134
BsaWI WCCGGW 2 cut(s) 496, 1100
Bsc4I CCNNNNNNNGG 6 cut(s) 103, 429, 472, 473, 880, 1060
Bse1I ACTGG 1 cut(s) 1001
Bse3DI GCAATG 1 cut(s) 1158
Bse8I GATNNNNATC 1 cut(s) 132
BseAI TCCGGA 1 cut(s) 1100
BseBI CCWGG 4 cut(s) 45, 468, 782, 835
BseDI CCNNGG 2 cut(s) 466, 1134
BseGI GGATG 7 cut(s) 133, 232, 304, 908, 913, 1033, 1109
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 6 cut(s) 103, 429, 472, 473, 880, 1060
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 4 cut(s) 560, 567, 606, 1014
BseNI ACTGG 1 cut(s) 1001
BseRI GAGGAG 1 cut(s) 405
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 4 cut(s) 439, 477, 628, 1160
BseYI CCCAGC 1 cut(s) 89
BsgI GTGCAG 2 cut(s) 28, 627
Bsh1285I CGRYCG 1 cut(s) 497
BshFI GGCC 7 cut(s) 118, 159, 422, 477, 624, 884, 1110
BshNI GGYRCC 1 cut(s) 730
BsiEI CGRYCG 1 cut(s) 497
BsiSI CCGG 2 cut(s) 497, 1101
BslFI GGGAC 1 cut(s) 1116
BslI CCNNNNNNNGG 6 cut(s) 103, 429, 472, 473, 880, 1060
BsmAI GTCTC 3 cut(s) 268, 938, 1042
BsmFI GGGAC 1 cut(s) 1116
BsnI GGCC 7 cut(s) 118, 159, 422, 477, 624, 884, 1110
Bsp120I GGGCCC 1 cut(s) 420
Bsp1286I GDGCHC 1 cut(s) 424
Bsp13I TCCGGA 1 cut(s) 1100
Bsp143I GATC 1 cut(s) 460
Bsp1720I GCTNAGC 1 cut(s) 35
BspANI GGCC 7 cut(s) 118, 159, 422, 477, 624, 884, 1110
BspCNI CTCAG 4 cut(s) 559, 568, 605, 1015
BspEI TCCGGA 1 cut(s) 1100
BspHI TCATGA 1 cut(s) 610
BspLI GGNNCC 5 cut(s) 421, 422, 476, 732, 885
BspMI ACCTGC 1 cut(s) 564
BspT107I GGYRCC 1 cut(s) 730
BspTI CTTAAG 1 cut(s) 1165
BsrDI GCAATG 1 cut(s) 1158
BsrI ACTGG 1 cut(s) 1001
BssECI CCNNGG 2 cut(s) 466, 1134
BssMI GATC 1 cut(s) 460
BssT1I CCWWGG 1 cut(s) 1134
Bst2UI CCWGG 4 cut(s) 45, 468, 782, 835
Bst4CI ACNGT 1 cut(s) 448
Bst6I CTCTTC 4 cut(s) 27, 252, 288, 1119
BstAFI CTTAAG 1 cut(s) 1165
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstC8I GCNNGC 5 cut(s) 41, 289, 735, 831, 1018
BstDEI CTNAG 5 cut(s) 35, 546, 576, 592, 1023
BstENI CCTNNNNNAGG 1 cut(s) 878
BstF5I GGATG 7 cut(s) 133, 232, 304, 908, 913, 1033, 1109
BstH2I RGCGCY 1 cut(s) 1023
BstHHI GCGC 1 cut(s) 1022
BstKTI GATC 1 cut(s) 463
BstMAI GTCTC 3 cut(s) 268, 938, 1042
BstMBI GATC 1 cut(s) 460
BstMCI CGRYCG 1 cut(s) 497
BstMWI GCNNNNNNNGC 4 cut(s) 40, 638, 1028, 1145
BstNI CCWGG 4 cut(s) 45, 468, 782, 835
BstNSI RCATGY 3 cut(s) 413, 1000, 1195
BstSCI CCNGG 4 cut(s) 43, 466, 780, 833
BstSFI CTRYAG 2 cut(s) 108, 181
BstSLI GKGCMC 1 cut(s) 424
BstV1I GCAGC 4 cut(s) 439, 477, 628, 1160
BstV2I GAAGAC 1 cut(s) 999
BsuI GTATCC 1 cut(s) 741
BsuRI GGCC 7 cut(s) 118, 159, 422, 477, 624, 884, 1110
BtgZI GCGATG 1 cut(s) 997
BtrI CACGTC 1 cut(s) 6
BtsCI GGATG 7 cut(s) 133, 232, 304, 908, 913, 1033, 1109
BtsIMutI CAGTG 3 cut(s) 600, 669, 1008
BveI ACCTGC 1 cut(s) 564
Cac8I GCNNGC 5 cut(s) 41, 289, 735, 831, 1018
CaiI CAGNNNCTG 1 cut(s) 452
CciI TCATGA 1 cut(s) 610
CfoI GCGC 1 cut(s) 1022
Cfr13I GGNCC 4 cut(s) 420, 421, 475, 883
CsiI ACCWGGT 1 cut(s) 780
Csp6I GTAC 4 cut(s) 215, 309, 324, 653
CspCI CAANNNNNGTGG 2 cut(s) 708, 743
CviAII CATG 8 cut(s) 197, 377, 402, 410, 611, 920, 997, 1192
CviQI GTAC 4 cut(s) 215, 309, 324, 653
DdeI CTNAG 5 cut(s) 35, 546, 576, 592, 1023
DpnI GATC 1 cut(s) 462
DpnII GATC 1 cut(s) 460
EaeI YGGCCR 1 cut(s) 1108
Eam1104I CTCTTC 4 cut(s) 27, 252, 288, 1119
EarI CTCTTC 4 cut(s) 27, 252, 288, 1119
Eco130I CCWWGG 1 cut(s) 1134
Eco147I AGGCCT 1 cut(s) 624
Eco24I GRGCYC 1 cut(s) 424
Eco32I GATATC 1 cut(s) 1098
Eco57I CTGAAG 2 cut(s) 276, 1001
EcoNI CCTNNNNNAGG 1 cut(s) 878
EcoO109I RGGNCCY 4 cut(s) 420, 421, 475, 883
EcoRI GAATTC 1 cut(s) 667
EcoRII CCWGG 4 cut(s) 43, 466, 780, 833
EcoRV GATATC 1 cut(s) 1098
EcoT14I CCWWGG 1 cut(s) 1134
EcoT38I GRGCYC 1 cut(s) 424
ErhI CCWWGG 1 cut(s) 1134
FaeI CATG 8 cut(s) 200, 380, 405, 413, 614, 923, 1000, 1195
FalI AAGNNNNNCTT 2 cut(s) 23, 55
FaqI GGGAC 1 cut(s) 1116
FatI CATG 8 cut(s) 196, 376, 401, 409, 610, 919, 996, 1191
Fnu4HI GCNGC 4 cut(s) 453, 491, 642, 1149
FokI GGATG 7 cut(s) 120, 239, 311, 915, 920, 1040, 1116
FriOI GRGCYC 1 cut(s) 424
Fsp4HI GCNGC 4 cut(s) 453, 491, 642, 1149
FspBI CTAG 3 cut(s) 896, 1083, 1088
GlaI GCGC 1 cut(s) 1021
GluI GCNGC 4 cut(s) 453, 491, 642, 1149
GsaI CCCAGC 1 cut(s) 93
HaeII RGCGCY 1 cut(s) 1023
HaeIII GGCC 7 cut(s) 118, 159, 422, 477, 624, 884, 1110
HapII CCGG 2 cut(s) 497, 1101
HhaI GCGC 1 cut(s) 1022
Hin1II CATG 8 cut(s) 200, 380, 405, 413, 614, 923, 1000, 1195
Hin6I GCGC 1 cut(s) 1020
HinP1I GCGC 1 cut(s) 1020
HincII GTYRAC 2 cut(s) 553, 855
HindII GTYRAC 2 cut(s) 553, 855
HindIII AAGCTT 1 cut(s) 32
HinfI GANTC 5 cut(s) 262, 393, 542, 971, 1173
HpaII CCGG 2 cut(s) 497, 1101
HphI GGTGA 2 cut(s) 42, 948
Hpy166II GTNNAC 3 cut(s) 50, 553, 855
Hpy188I TCNGA 2 cut(s) 256, 577
Hpy188III TCNNGA 8 cut(s) 83, 271, 611, 720, 754, 896, 1083, 1101
Hpy8I GTNNAC 3 cut(s) 50, 553, 855
HpyAV CCTTC 5 cut(s) 338, 635, 893, 976, 1171
HpyCH4III ACNGT 1 cut(s) 448
HpyCH4IV ACGT 3 cut(s) 5, 678, 864
HpyCH4V TGCA 7 cut(s) 9, 376, 444, 644, 968, 1148, 1195
HpyF10VI GCNNNNNNNGC 4 cut(s) 40, 638, 1028, 1145
HpyF3I CTNAG 5 cut(s) 35, 546, 576, 592, 1023
HpySE526I ACGT 3 cut(s) 5, 678, 864
Hsp92II CATG 8 cut(s) 200, 380, 405, 413, 614, 923, 1000, 1195
HspAI GCGC 1 cut(s) 1020
Kpn2I TCCGGA 1 cut(s) 1100
Kzo9I GATC 1 cut(s) 460
LmnI GCTCC 2 cut(s) 98, 177
Lsp1109I GCAGC 4 cut(s) 439, 477, 628, 1160
LweI GCATC 3 cut(s) 668, 832, 1018
MabI ACCWGGT 1 cut(s) 780
MaeI CTAG 3 cut(s) 896, 1083, 1088
MaeII ACGT 3 cut(s) 5, 678, 864
MaeIII GTNAC 1 cut(s) 679
MalI GATC 1 cut(s) 462
MboI GATC 1 cut(s) 460
MboII GAAGA 8 cut(s) 14, 269, 305, 512, 1004, 1041, 1106, 1136
MhlI GDGCHC 1 cut(s) 424
MlsI TGGCCA 1 cut(s) 1110
MluCI AATT 5 cut(s) 191, 316, 667, 807, 1078
MluNI TGGCCA 1 cut(s) 1110
MlyI GAGTC 2 cut(s) 402, 1167
Mox20I TGGCCA 1 cut(s) 1110
MroI TCCGGA 1 cut(s) 1100
MroXI GAANNNNTTC 2 cut(s) 261, 671
MscI TGGCCA 1 cut(s) 1110
MseI TTAA 5 cut(s) 140, 314, 704, 1044, 1166
MslI CAYNNNNRTG 2 cut(s) 615, 1001
Msp20I TGGCCA 1 cut(s) 1110
MspCI CTTAAG 1 cut(s) 1165
MspI CCGG 2 cut(s) 497, 1101
MspR9I CCNGG 4 cut(s) 45, 468, 782, 835
MvaI CCWGG 4 cut(s) 45, 468, 782, 835
MwoI GCNNNNNNNGC 4 cut(s) 40, 638, 1028, 1145
NdeII GATC 1 cut(s) 460
NlaIII CATG 8 cut(s) 200, 380, 405, 413, 614, 923, 1000, 1195
NlaIV GGNNCC 5 cut(s) 421, 422, 476, 732, 885
NmeAIII GCCGAG 1 cut(s) 409
NspI RCATGY 3 cut(s) 413, 1000, 1195
PagI TCATGA 1 cut(s) 610
PceI AGGCCT 1 cut(s) 624
PdmI GAANNNNTTC 2 cut(s) 261, 671
PfeI GAWTC 3 cut(s) 262, 542, 971
PflMI CCANNNNNTGG 1 cut(s) 1060
PkrI GCNGC 4 cut(s) 454, 492, 643, 1150
PleI GAGTC 2 cut(s) 401, 1167
PpsI GAGTC 2 cut(s) 401, 1167
PsiI TTATAA 2 cut(s) 534, 879
Psp1406I AACGTT 1 cut(s) 678
Psp6I CCWGG 4 cut(s) 43, 466, 780, 833
PspFI CCCAGC 1 cut(s) 89
PspGI CCWGG 4 cut(s) 43, 466, 780, 833
PspN4I GGNNCC 5 cut(s) 421, 422, 476, 732, 885
PspOMI GGGCCC 1 cut(s) 420
PspPI GGNCC 4 cut(s) 420, 421, 475, 883
PsrI GAACNNNNNNTAC 2 cut(s) 793, 825
PstNI CAGNNNCTG 1 cut(s) 452
RsaI GTAC 4 cut(s) 216, 310, 325, 654
RsaNI GTAC 4 cut(s) 215, 309, 324, 653
RseI CAYNNNNRTG 2 cut(s) 615, 1001
SaqAI TTAA 5 cut(s) 140, 314, 704, 1044, 1166
SatI GCNGC 4 cut(s) 453, 491, 642, 1149
Sau3AI GATC 1 cut(s) 460
Sau96I GGNCC 4 cut(s) 420, 421, 475, 883
SchI GAGTC 2 cut(s) 402, 1167
ScrFI CCNGG 4 cut(s) 45, 468, 782, 835
SduI GDGCHC 1 cut(s) 424
SexAI ACCWGGT 1 cut(s) 780
SfaNI GCATC 3 cut(s) 668, 832, 1018
SfcI CTRYAG 2 cut(s) 108, 181
SmiMI CAYNNNNRTG 2 cut(s) 615, 1001
SmlI CTYRAG 4 cut(s) 271, 484, 754, 1165
SmoI CTYRAG 4 cut(s) 271, 484, 754, 1165
SpeI ACTAGT 1 cut(s) 1087
Sse9I AATT 5 cut(s) 191, 316, 667, 807, 1078
SseBI AGGCCT 1 cut(s) 624
SspMI CTAG 3 cut(s) 896, 1083, 1088
StuI AGGCCT 1 cut(s) 624
StyD4I CCNGG 4 cut(s) 43, 466, 780, 833
StyI CCWWGG 1 cut(s) 1134
TaaI ACNGT 1 cut(s) 448
TaiI ACGT 3 cut(s) 8, 681, 867
TasI AATT 5 cut(s) 191, 316, 667, 807, 1078
TatI WGTACW 2 cut(s) 308, 652
TfiI GAWTC 3 cut(s) 262, 542, 971
Tru1I TTAA 5 cut(s) 140, 314, 704, 1044, 1166
Tru9I TTAA 5 cut(s) 140, 314, 704, 1044, 1166
TscAI CASTG 3 cut(s) 600, 669, 1008
TseI GCWGC 4 cut(s) 452, 490, 641, 1148
TspDTI ATGAA 4 cut(s) 14, 185, 390, 924
TspRI CASTG 3 cut(s) 600, 669, 1008
Van91I CCANNNNNTGG 1 cut(s) 1060
Vha464I CTTAAG 1 cut(s) 1165
XagI CCTNNNNNAGG 1 cut(s) 878
XapI RAATTY 3 cut(s) 316, 667, 1078
XbaI TCTAGA 2 cut(s) 895, 1082
XceI RCATGY 3 cut(s) 413, 1000, 1195
XmnI GAANNNNTTC 2 cut(s) 261, 671
XspI CTAG 3 cut(s) 896, 1083, 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.