pycom17g22040

Pyrophosphate-energized vacuolar membrane proton

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
20455445 .. 20457747
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1188 bp
ATGACTATTGGAATTGCAATTGTTAGCTGGATTGCTCTGCCGTCATCCTTCACAATTTTCAATTTTGGAGTTCAGAAGGTTGTTAAAAACTGGCAATTGTTCTTGTGTGTGGCTGTTGGTCTTTGGGCTGGACTCATTATTGGGTTCGTCACCGAGTATTATACTAGCAACGCATACAGCCCTGTGCAAGATGTTGCTGACTCCTGCAGAACTGGTGCTGCCACCAATGTTATCTTTGGGCTTGCTTTGGGATACAAATCAGTCATCATTCCAATTTTTGCCATTGCAGTCAGCATTTATGTTAGTTTTAGCTTTGCTGCTATGTATGGCATTGCAGTGGCTGCACTTGGGATGCTGAGCACCATTGCTACAGGATTGGCCATTGATGCTTATGGTCCCATCAGTGACAATGCTGGAGGCATTGCTGAAATGGCTGGCATGAGCCATAGAATCCGTGAGAGAACTGATGCTCTTGATGCTGCTGGGAATACCACTGCTGCTATTGGAAAGGGATTTGCCAATGGATCTGCTGCTCTGGTGTCATTGGCTCTATTTGGCGCCTTTGTCAGTCGTGCAGCAATCTCAACTGTTGATGTCTTAACCCCAAAGGTCTTTATTGGACTTATCGTGGGTGCAATGCTTCCTTACTGGTTCTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCACTAAAAATGGTTGAGGAAGTCCGTAGGCAGTTCAATACCATTCCAGGTCTCATGGAGGGCACTGCTAAGCCTGACTATGCTACCTGCGTCAAGATCTCCACTGATGCATCCATCAAGGAGATGATTCCACCTGGTGCCCTTGTCATTCTTACACCTCTGATTGTTGGAACATTCTTTGGCGTGGAGACCCTATCCGGTGTTCTGGCTGGTTCCCTTGTTTCTGGTGTGCAGATAGCGATATCTGCTTCTAACACTGGTGGTGCATGGGACAATGCTAAGAAGTACATTGAGGCCGGTGCTTCAGAGCATGCAAGGACCCTCGGCCCGAAGGGTTCAGACCCACACAAGGCAGCAGTGATTGGTGACACCATTGGAGACCCGCTCAAGGACACCTCAGGGCCATCACTCAATATCCTTATTAAGCTCATGGCCGTGGAGTCCCTTGTGTTTGCTCCCTTCTTCGCCACTCATGGCGGCCTACTTTTCAAGATCTTTTGA

Protein Analysis

396

Amino Acids

41.02

Weight (kDa)

6.9

Isoelectric Point (pI)

16.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 17 - 380 6.9e-157 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019816)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 782
AccB1I GGYRCC 2 cut(s) 557, 824
AccBSI CCGCTC 1 cut(s) 1072
AciI CCGC 2 cut(s) 1070, 1164
AclWI GGATC 1 cut(s) 532
AcoI YGGCCR 2 cut(s) 378, 1119
AcuI CTGAAG 1 cut(s) 975
AcyI GRCGYC 1 cut(s) 558
AdeI CACNNNGTG 1 cut(s) 824
AfaI GTAC 1 cut(s) 974
AfiI CCNNNNNNNGG 2 cut(s) 1036, 1075
AgsI TTSAA 3 cut(s) 61, 724, 1177
AjnI CCWGG 2 cut(s) 733, 820
AluBI AGCT 3 cut(s) 27, 312, 1114
AluI AGCT 3 cut(s) 27, 312, 1114
Alw21I GWGCWC 1 cut(s) 362
Alw26I GTCTC 3 cut(s) 743, 869, 1059
AlwI GGATC 1 cut(s) 532
AlwNI CAGNNNCTG 1 cut(s) 341
AoxI GGCC 6 cut(s) 378, 981, 1012, 1088, 1119, 1165
ApeKI GCWGC 9 cut(s) 218, 317, 341, 479, 497, 530, 575, 686, 1040
AspLEI GCGC 1 cut(s) 560
AspS9I GGNCC 4 cut(s) 395, 1005, 1013, 1088
AsuHPI GGTGA 2 cut(s) 142, 1064
AvaII GGWCC 2 cut(s) 395, 1005
AxyI CCTNAGG 1 cut(s) 1084
BaeGI GKGCMC 2 cut(s) 752, 829
BalI TGGCCA 1 cut(s) 380
BanI GGYRCC 2 cut(s) 557, 824
Bbv12I GWGCWC 1 cut(s) 362
BbvI GCAGC 9 cut(s) 205, 304, 328, 466, 484, 517, 587, 673, 1052
BccI CCATC 3 cut(s) 407, 809, 1099
BceAI ACGGC 2 cut(s) 25, 1106
BciT130I CCWGG 2 cut(s) 735, 822
BciVI GTATCC 1 cut(s) 245
BcoDI GTCTC 3 cut(s) 743, 869, 1059
BfaI CTAG 1 cut(s) 165
BfmI CTRYAG 2 cut(s) 205, 369
BfoI RGCGCY 1 cut(s) 561
BfuAI ACCTGC 1 cut(s) 782
BfuI GTATCC 1 cut(s) 245
BglII AGATCT 2 cut(s) 783, 1179
BlpI GCTNAGC 2 cut(s) 356, 756
Bme1390I CCNGG 2 cut(s) 735, 822
Bme18I GGWCC 2 cut(s) 395, 1005
BmgT120I GGNCC 4 cut(s) 395, 1005, 1013, 1088
BmiI GGNNCC 5 cut(s) 397, 559, 826, 901, 1007
BmrFI CCNGG 2 cut(s) 735, 822
BmsI GCATC 6 cut(s) 342, 376, 457, 466, 784, 806
BplI GAGNNNNNCTC 2 cut(s) 1056, 1088
BpmI CTGGAG 1 cut(s) 435
Bpu1102I GCTNAGC 2 cut(s) 356, 756
BpuEI CTTGAG 1 cut(s) 1058
BsaBI GATNNNNATC 1 cut(s) 256
BsaHI GRCGYC 1 cut(s) 558
BsaI GGTCTC 3 cut(s) 743, 869, 1059
BsaJI CCNNGG 2 cut(s) 1009, 1122
BsaWI WCCGGW 1 cut(s) 884
Bsc4I CCNNNNNNNGG 2 cut(s) 1036, 1075
Bse118I RCCGGY 1 cut(s) 983
Bse1I ACTGG 4 cut(s) 95, 217, 653, 949
Bse21I CCTNAGG 1 cut(s) 1084
Bse3DI GCAATG 5 cut(s) 282, 330, 363, 420, 642
Bse8I GATNNNNATC 1 cut(s) 256
BseBI CCWGG 2 cut(s) 735, 822
BseDI CCNNGG 2 cut(s) 1009, 1122
BseGI GGATG 3 cut(s) 44, 357, 797
BseJI GATNNNNATC 1 cut(s) 256
BseLI CCNNNNNNNGG 2 cut(s) 1036, 1075
BseMI GCAATG 5 cut(s) 282, 330, 363, 420, 642
BseMII CTCAG 2 cut(s) 347, 1098
BseNI ACTGG 4 cut(s) 95, 217, 653, 949
BseSI GKGCMC 2 cut(s) 752, 829
BseXI GCAGC 9 cut(s) 205, 304, 328, 466, 484, 517, 587, 673, 1052
BseYI CCCAGC 1 cut(s) 482
BsgI GTGCAG 4 cut(s) 327, 594, 672, 938
BshFI GGCC 6 cut(s) 380, 983, 1014, 1090, 1121, 1167
BshNI GGYRCC 2 cut(s) 557, 824
BsiHKAI GWGCWC 1 cut(s) 362
BsiSI CCGG 2 cut(s) 885, 984
BslFI GGGAC 3 cut(s) 381, 971, 1114
BslI CCNNNNNNNGG 2 cut(s) 1036, 1075
BsmAI GTCTC 3 cut(s) 743, 869, 1059
BsmFI GGGAC 3 cut(s) 381, 971, 1114
BsnI GGCC 6 cut(s) 380, 983, 1014, 1090, 1121, 1167
Bso31I GGTCTC 3 cut(s) 743, 869, 1059
Bsp1286I GDGCHC 3 cut(s) 362, 752, 829
Bsp143I GATC 3 cut(s) 524, 783, 1179
Bsp1720I GCTNAGC 2 cut(s) 356, 756
BspACI CCGC 2 cut(s) 1070, 1164
BspANI GGCC 6 cut(s) 380, 983, 1014, 1090, 1121, 1167
BspCNI CTCAG 2 cut(s) 348, 1097
BspLI GGNNCC 5 cut(s) 397, 559, 826, 901, 1007
BspMAI CTGCAG 1 cut(s) 209
BspMI ACCTGC 1 cut(s) 782
BspPI GGATC 1 cut(s) 532
BspT107I GGYRCC 2 cut(s) 557, 824
BspTNI GGTCTC 3 cut(s) 743, 869, 1059
BsrBI CCGCTC 1 cut(s) 1072
BsrDI GCAATG 5 cut(s) 282, 330, 363, 420, 642
BsrFI RCCGGY 1 cut(s) 983
BsrI ACTGG 4 cut(s) 95, 217, 653, 949
BssAI RCCGGY 1 cut(s) 983
BssECI CCNNGG 2 cut(s) 1009, 1122
BssMI GATC 3 cut(s) 524, 783, 1179
BssNI GRCGYC 1 cut(s) 558
Bst2UI CCWGG 2 cut(s) 735, 822
Bst4CI ACNGT 1 cut(s) 589
Bst6I CTCTTC 1 cut(s) 665
BstACI GRCGYC 1 cut(s) 558
BstAPI GCANNNNNTGC 1 cut(s) 341
BstC8I GCNNGC 3 cut(s) 243, 436, 999
BstDEI CTNAG 4 cut(s) 356, 756, 966, 1084
BstDSI CCRYGG 1 cut(s) 1122
BstF5I GGATG 3 cut(s) 44, 357, 797
BstH2I RGCGCY 1 cut(s) 561
BstHHI GCGC 1 cut(s) 560
BstKTI GATC 3 cut(s) 527, 786, 1182
BstMAI GTCTC 3 cut(s) 743, 869, 1059
BstMBI GATC 3 cut(s) 524, 783, 1179
BstMWI GCNNNNNNNGC 5 cut(s) 341, 386, 431, 476, 932
BstNI CCWGG 2 cut(s) 735, 822
BstNSI RCATGY 1 cut(s) 1001
BstSCI CCNGG 2 cut(s) 733, 820
BstSFI CTRYAG 2 cut(s) 205, 369
BstSLI GKGCMC 2 cut(s) 752, 829
BstV1I GCAGC 9 cut(s) 205, 304, 328, 466, 484, 517, 587, 673, 1052
BstX2I RGATCY 3 cut(s) 524, 783, 1179
BstYI RGATCY 3 cut(s) 524, 783, 1179
Bsu36I CCTNAGG 1 cut(s) 1084
BsuI GTATCC 1 cut(s) 245
BsuRI GGCC 6 cut(s) 380, 983, 1014, 1090, 1121, 1167
BtgI CCRYGG 1 cut(s) 1122
BtsCI GGATG 3 cut(s) 44, 357, 797
BtsI GCAGTG 4 cut(s) 342, 492, 750, 1050
BtsIMutI CAGTG 7 cut(s) 342, 409, 492, 750, 789, 942, 1050
BveI ACCTGC 1 cut(s) 782
Cac8I GCNNGC 3 cut(s) 243, 436, 999
CaiI CAGNNNCTG 1 cut(s) 341
CfoI GCGC 1 cut(s) 560
Cfr10I RCCGGY 1 cut(s) 983
Cfr13I GGNCC 4 cut(s) 395, 1005, 1013, 1088
CseI GACGC 1 cut(s) 766
CsiI ACCWGGT 1 cut(s) 820
Csp6I GTAC 1 cut(s) 973
CviAII CATG 8 cut(s) 439, 661, 667, 742, 954, 998, 1117, 1160
CviQI GTAC 1 cut(s) 973
DdeI CTNAG 4 cut(s) 356, 756, 966, 1084
DinI GGCGCC 1 cut(s) 559
DpnI GATC 3 cut(s) 526, 785, 1181
DpnII GATC 3 cut(s) 524, 783, 1179
DraIII CACNNNGTG 1 cut(s) 824
EaeI YGGCCR 2 cut(s) 378, 1119
Eam1104I CTCTTC 1 cut(s) 665
EarI CTCTTC 1 cut(s) 665
Eco31I GGTCTC 3 cut(s) 743, 869, 1059
Eco32I GATATC 1 cut(s) 930
Eco47I GGWCC 2 cut(s) 395, 1005
Eco57I CTGAAG 1 cut(s) 975
Eco81I CCTNAGG 1 cut(s) 1084
EcoO109I RGGNCCY 1 cut(s) 1005
EcoRII CCWGG 2 cut(s) 733, 820
EcoRV GATATC 1 cut(s) 930
EcoT22I ATGCAT 1 cut(s) 799
EgeI GGCGCC 1 cut(s) 559
EheI GGCGCC 1 cut(s) 559
FaeI CATG 8 cut(s) 442, 664, 670, 745, 957, 1001, 1120, 1163
FaqI GGGAC 3 cut(s) 381, 971, 1114
FatI CATG 8 cut(s) 438, 660, 666, 741, 953, 997, 1116, 1159
FauI CCCGC 1 cut(s) 1077
FokI GGATG 3 cut(s) 31, 364, 784
FspBI CTAG 1 cut(s) 165
GlaI GCGC 1 cut(s) 559
GsaI CCCAGC 1 cut(s) 486
GsuI CTGGAG 1 cut(s) 435
HaeII RGCGCY 1 cut(s) 561
HaeIII GGCC 6 cut(s) 380, 983, 1014, 1090, 1121, 1167
HapII CCGG 2 cut(s) 885, 984
HgaI GACGC 1 cut(s) 766
HhaI GCGC 1 cut(s) 560
Hin1I GRCGYC 1 cut(s) 558
Hin1II CATG 8 cut(s) 442, 664, 670, 745, 957, 1001, 1120, 1163
Hin6I GCGC 1 cut(s) 558
HinP1I GCGC 1 cut(s) 558
HinfI GANTC 5 cut(s) 132, 200, 450, 814, 1127
HpaII CCGG 2 cut(s) 885, 984
HphI GGTGA 2 cut(s) 142, 1064
Hpy188I TCNGA 4 cut(s) 75, 849, 994, 1027
Hpy188III TCNNGA 3 cut(s) 473, 781, 1177
HpyAV CCTTC 4 cut(s) 58, 70, 1012, 1156
HpyCH4III ACNGT 1 cut(s) 589
HpyF10VI GCNNNNNNNGC 5 cut(s) 341, 386, 431, 476, 932
HpyF3I CTNAG 4 cut(s) 356, 756, 966, 1084
Hsp92I GRCGYC 1 cut(s) 558
Hsp92II CATG 8 cut(s) 442, 664, 670, 745, 957, 1001, 1120, 1163
HspAI GCGC 1 cut(s) 558
KasI GGCGCC 1 cut(s) 557
Kzo9I GATC 3 cut(s) 524, 783, 1179
LmnI GCTCC 1 cut(s) 1147
Lsp1109I GCAGC 9 cut(s) 205, 304, 328, 466, 484, 517, 587, 673, 1052
LweI GCATC 6 cut(s) 342, 376, 457, 466, 784, 806
MabI ACCWGGT 1 cut(s) 820
MaeI CTAG 1 cut(s) 165
MaeIII GTNAC 3 cut(s) 148, 404, 1052
MalI GATC 3 cut(s) 526, 785, 1181
MbiI CCGCTC 1 cut(s) 1072
MboI GATC 3 cut(s) 524, 783, 1179
MboII GAAGA 2 cut(s) 682, 1141
MfeI CAATTG 2 cut(s) 18, 95
MflI RGATCY 3 cut(s) 524, 783, 1179
MhlI GDGCHC 3 cut(s) 362, 752, 829
MlsI TGGCCA 1 cut(s) 380
MluCI AATT 6 cut(s) 12, 18, 54, 61, 95, 273
MluNI TGGCCA 1 cut(s) 380
Mly113I GGCGCC 1 cut(s) 558
MlyI GAGTC 3 cut(s) 126, 194, 1136
MmeI TCCRAC 1 cut(s) 835
MnlI CCTC 7 cut(s) 410, 697, 739, 855, 973, 1019, 1093
Mox20I TGGCCA 1 cut(s) 380
Mph1103I ATGCAT 1 cut(s) 799
MscI TGGCCA 1 cut(s) 380
MseI TTAA 3 cut(s) 84, 599, 1110
MslI CAYNNNNRTG 3 cut(s) 335, 665, 1121
Msp20I TGGCCA 1 cut(s) 380
MspI CCGG 2 cut(s) 885, 984
MspR9I CCNGG 2 cut(s) 735, 822
MunI CAATTG 2 cut(s) 18, 95
MvaI CCWGG 2 cut(s) 735, 822
MwoI GCNNNNNNNGC 5 cut(s) 341, 386, 431, 476, 932
NarI GGCGCC 1 cut(s) 558
NdeII GATC 3 cut(s) 524, 783, 1179
NlaIII CATG 8 cut(s) 442, 664, 670, 745, 957, 1001, 1120, 1163
NlaIV GGNNCC 5 cut(s) 397, 559, 826, 901, 1007
NmeAIII GCCGAG 1 cut(s) 990
NmuCI GTSAC 3 cut(s) 148, 404, 1052
NsiI ATGCAT 1 cut(s) 799
NspI RCATGY 1 cut(s) 1001
PaeI GCATGC 1 cut(s) 1001
PfeI GAWTC 2 cut(s) 450, 814
PleI GAGTC 3 cut(s) 126, 194, 1135
PluTI GGCGCC 1 cut(s) 561
PpsI GAGTC 3 cut(s) 126, 194, 1135
PpuMI RGGWCCY 1 cut(s) 1005
Psp5II RGGWCCY 1 cut(s) 1005
Psp6I CCWGG 2 cut(s) 733, 820
PspFI CCCAGC 1 cut(s) 482
PspGI CCWGG 2 cut(s) 733, 820
PspN4I GGNNCC 5 cut(s) 397, 559, 826, 901, 1007
PspPI GGNCC 4 cut(s) 395, 1005, 1013, 1088
PspPPI RGGWCCY 1 cut(s) 1005
PstI CTGCAG 1 cut(s) 209
PstNI CAGNNNCTG 1 cut(s) 341
PsuI RGATCY 3 cut(s) 524, 783, 1179
RsaI GTAC 1 cut(s) 974
RsaNI GTAC 1 cut(s) 973
RseI CAYNNNNRTG 3 cut(s) 335, 665, 1121
SaqAI TTAA 3 cut(s) 84, 599, 1110
Sau3AI GATC 3 cut(s) 524, 783, 1179
Sau96I GGNCC 4 cut(s) 395, 1005, 1013, 1088
SchI GAGTC 3 cut(s) 126, 194, 1136
ScrFI CCNGG 2 cut(s) 735, 822
SduI GDGCHC 3 cut(s) 362, 752, 829
SexAI ACCWGGT 1 cut(s) 820
SfaNI GCATC 6 cut(s) 342, 376, 457, 466, 784, 806
SfcI CTRYAG 2 cut(s) 205, 369
SfoI GGCGCC 1 cut(s) 559
SinI GGWCC 2 cut(s) 395, 1005
SmiMI CAYNNNNRTG 3 cut(s) 335, 665, 1121
SmlI CTYRAG 1 cut(s) 1073
SmoI CTYRAG 1 cut(s) 1073
SphI GCATGC 1 cut(s) 1001
Sse9I AATT 6 cut(s) 12, 18, 54, 61, 95, 273
SsiI CCGC 2 cut(s) 1070, 1164
SspDI GGCGCC 1 cut(s) 557
SspMI CTAG 1 cut(s) 165
StyD4I CCNGG 2 cut(s) 733, 820
TaaI ACNGT 1 cut(s) 589
TasI AATT 6 cut(s) 12, 18, 54, 61, 95, 273
TatI WGTACW 1 cut(s) 972
TauI GCSGC 1 cut(s) 1167
TfiI GAWTC 2 cut(s) 450, 814
Tru1I TTAA 3 cut(s) 84, 599, 1110
Tru9I TTAA 3 cut(s) 84, 599, 1110
TscAI CASTG 7 cut(s) 342, 409, 499, 757, 796, 949, 1050
TseFI GTSAC 3 cut(s) 148, 404, 1052
TseI GCWGC 9 cut(s) 218, 317, 341, 479, 497, 530, 575, 686, 1040
Tsp45I GTSAC 3 cut(s) 148, 404, 1052
TspDTI ATGAA 1 cut(s) 683
TspGWI ACGGA 2 cut(s) 443, 701
TspRI CASTG 7 cut(s) 342, 409, 499, 757, 796, 949, 1050
VpaK11BI GGWCC 2 cut(s) 395, 1005
XceI RCATGY 1 cut(s) 1001
XcmI CCANNNNNNNNNTGG 1 cut(s) 673
XspI CTAG 1 cut(s) 165
Zsp2I ATGCAT 1 cut(s) 799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.