pycom17g24360

callose synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
22687055 .. 22692482
5428 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 5334 bp
ATGCTACCTGAAATCCGTTTGAATTTAGACCTAAAAATCCCTCACCCGGTCACACCAAACTTAAAAAGGAAAAGGCAAGGAAACGACGTTAACGCGCCCCCACCTTCCTTTTCGGCCCTTATCCCGCACACCCTCTCTTACTCTGTGCAATTCGTTTTGCACGTTACATCCATCTCCCCCAGCTGTCTCCCCCCACTCTCTTCCCACATCAGAACCCAGAAAAAAGAAGCAAACCTAATACCTAATACCACCGCCGAACACACCCACCCACCGTGCTACCCCCTTCTTCCAATCCTCCATGCCATGAGTATCCGGCGGGGTACTCAATCCTCCTCCGACGACCCCGACTCGGAGCCCTACAACATCATCCCCGTCCACGACCTCCTCGCCGACCACCCCTCCCTCCGTTTCCCCGAGGTACGCGCAGCCGCCGCCTCTCTACGCGCCGTTGGCAACCTCCGCCGTCCCCCTTACGCTCAATGGCAGCCCCACATGGACCTCCTCGACTGGCTCGCCCTCTTCTTCGGCTTCCAGTACGACAACGTCCGCAACCAGCGCGAGCACATCGTCCTCCACCTCGCCAACGCTCAGATGCGCCTCAACCCTCCCCCGGACAACATCGACACACTGGACGGTGCCGTTTTGAGGAAGTTCCGGAAGAAGCTGCTCAAGAACTACACCAGCTGGTGCTCCTATTTGGGGAAGAAGTCCAATATCTGGATCTCCGACCGGAGGCGTGATGCTGCCGCCGACCAGCGCCGGGAGCTGCTGTACGTGTCACTGTACCTGCTGATCTGGGGCGAGGCGGCGAATCTGAGGTTTGTCCCTGAGTGCTTGTGCTTTATTTTTCATAACATGGCCATGGAATTGAACAAGATCTTGGAGGATTATATTGATGAGCAGACGGGTCAGCCCGTGATGCCGTCGACTTTGGGGGAGAATGCGTTCTTGAATAGTGTTGTGAAACCCATTTACGAGACGATTCGAGCCGAGGTGGAGAGCAGCAGGAATGGGACTGCCCCTCATAGTGTGTGGAGGAACTATGATGATATCAATGAGTATTTCTGGAGTAAGAGGTGTTTTGACAAGCTCAGGTGGCCTGTTGATGTTGGGAGTAACTTTTTTGTTACTTCTAGTAGGAGTAGGCATGTGGGGAAGACTGGGTTTGTGGAGCAGAGGTCCTTATGGAACTTGTTTCGGAGCTTCGACAAGCTCTGGATCATGTTGTTTATGTTCCTCCAGGCGGCTATTATTGTTGCTTGGGAGGAGAGGGAGTTTCCGTGGCAGGCGTTGGAGGAGAGGGAAGTGCAGGTCAAGGTTTTGACTGTGTTTTTCACTTGGGCTGGTTTGAGGTTTTTGCAGTCGTTGCTTGATGTGGGAATGCAGTATAGTCTGGTTTCGAGGGAGACTTTGGGGCTCGGAGTGAGGATGGTGTTGAAGAGCATAGTTGCTGCCCTGTGGATTGTCATTTTTGGTGTGTTCTATGGGAGGATATGGACGCAGAGAAATCAGGATGGGAAGTGGTCCACCGAGGCAAATAATCGGGTGGTGAATTTTCTTACGGTTGCATTGGTTTTCATCCTACCAGAGCTTTTGGCTTTGGTCCTCTTTATTCTTCCTTGGGTTCGGAATTTTCTTGAGAACACAAACTGGAAGATATTTTACATGTTATCGTGGTGGTTTCAGAGCAGGACTTTTGTTGGCCGTGGCTTGAGAGAAGGACTTGTGGACAATATAAAGTACACTTTGTTCTGGATTTTCGTGCTTGCTACGAAATTTTCTTTCAGCTACTTCATGCAGATTAAACCCCTGATTCGCCCATCAAAAGAACTCATAAAACTTAAGAATGTGAACTATGAGTGGCATCAGTTTTTTGGCAACAGCAACAAATTTGCAGTGGGATTGCTGTGGCTTCCAGTCGTTTTGATATACCTCATGGATTTGCAGCTGTTCTATTCGATTTACTCCTCTCTTGTAGGGGCAGGAGTGGGCTTGTTTGCACATTTGGGCGAGATACGAAATATCGGGCAATTGAGGCTGAGATTCCAGTTCTTTGCAAGTGCAATTCAGTTTAATCTCATGCCAGAAGAGCAACTGTTAAATGCAAGGGGAACTCTGAGGAGTAAGTTTAATGATGCCATCCACCGGTTGAAACTGAGGTATGGGCTTGGACGGCCTTATAAGAAGCTCGAATCCAACCAGGTTGAGGCAACCAGGTTTGCTTTGATATGGAATGAGATCATTTTGATCTTCAGGGAAGAAGATATAATTTCTGACAGCGAGCTTGAGCTGTTAGAGCTGCCACAAAATTCTTGGAATATCAGGGTTATTCGGTGGCCTTGTTTTCTTCTTTGCAATGAACTGCTGCTGGCACTTAGTCAGGCCAAAGAGTTAGTAGATGCTCCTGATAAGTGGCTCTGGTATAAGGTATGCAAGAATGAGTACAGGCGCTGTGCTGTTATAGAAGCTTATGCTTGCATCAAGCACTTGCTACTTGACATCATCAAACGCAACACAGAAGAACATTCCATTATGACAGTCTTGTTTCAGGAAATTGATCACTCTCTTGAGATTGAGAAGTTCACGAAAACATTTAAAACGACGGCGCTTCCAGAGCTGCATGCCAAGTTGATCAAACTTGTTGAGCTTTTTAAAAAACCCAAGCAAGACACAAACCAGGTGGTAAATACTCTGCAGGCCCTTTATGAGATTGCCATTCGAGATTTTTTCAAGGAAAAAAGAAGTACTGAGCAGCTGATGGAGGATGGTTTGGCCCCTCGTAATCCAGGTTCTGCTGCAGGGCTGCTTTTTGAAAATGCTGTTGAGTCGCCTGATCCTAACAATGTATTCTTCTATAGGCAGGTTAGGCGCTTGCACACAATACTTACCTCTCGGGACTCAATGCAGAATATCCCAGTTAACCTTGAGGCAAGACGCAGAATTGCCTTCTTCAGTAACTCCTTGTTTATGAACATGCCCCATGCACCTCAAGTTGAGAAAATGATGGCCTTCAGTGTGCTGACCCCGTACTACAGTGAAGAAGTATTGTACAACAAAGAACAACTCCGTACGGAGAATGAAGATGGGGTTTCTACCCTGTATTATTTACAGACAATTTATGTTGACGAGTGGAAAAATTTTATGGAGAGGATGCGCAGAGAAGGAATGGGGAGTGATGATGAAATATGGTCAACTAAGTTGAGAGAACTCAGGCTTTGGGCATCTTACAGAGGCCAAACACTTACTAGGACCGTAAGGGGAATGATGTACTACTATCGGGCCCTGAAGATGTTGGCTTTTCTGGATTCTGCATCTGAGATGGACATTCGGGAAGGATCACAAGAACCTAGTTCCGCTATGCAAGACATTGGCTTGGACAGATTGACTTCTGAGAGGTCACCTTCTTCCCGAAGTTTAACTAGAACAAGCAGTTGTGTGGACTCATTGTACAAAGGTCATGAATATGGAACTGCTTTGATGAAATTTACATATGTGGTTGCATGCCAGATATATGGAACACAAAAAGTGAAAAAAGATCCCCATGCTGATGAAATTTTGTATTTGATGAAAACCAACGAAGCACTTCGAGTTGCCTATCTTGATGAGGTTTCAACTGGCAGGAATGAGAAGCAGTACTATTCTGTTCTTGTGAAGTATGATCAGAAATTAGAGAAGGAGGTGGAAATCTACCGCATAAAGTTGCCTGGTCCAATGAAGCTCGGAGAGGGAAAACCAGAGAATCAAAATCATGCCATTATCTTCACTCGTGGTGACGCAGTTCAGACGATTGATATGAACCAAGACAATTATTTTGAGGAGGCACTCAAAATGCGGAATCTATTGGAAGAGTACAGGCGCTATTATGGCATCCGGAAGCCTACCATCTTGGGAGTCAGAGAGCATATTTTTACTGGTTCCGTCTCATCACTTGCCTGGTTTATGTCAGCTCAAGAAACAAGTTTTGTCACCTTGGGGCAACGGGTGTTGGCGAACCCCTTGAAAATTAGAATGCATTATGGTCATCCAGATGTGTTTGACAGATTTTGGTTCTTGACTCGAGGTGGCATCAGTAAAGCTTCCAGGGTCATTAACATCAGTGAAGACATTTTTGCTGGCTTTAATTGCACATTGCGGGGTGGAAATGTCACACACCATGAATATATTCAAGTCGGCAAGGGAAGGGATGTTGGATTCAATCAAATTTCCATGTTTGAGGCCAAGGTTGCTAGTGGGAACGGGGAGCAAATTCTCAGCAGAGATGTCTATAGATTGGGTCACAGGCTGGATTTCTTGCGGATGCTATCATTCTTTTACACTACAGTGGGATTCTTTTTTAATACAATGGTGGTTGTTCTTACTGTGTATACATTTCTATGGGGCCGGCTTTATCTGGCTCTTAGTGGTCTTGAAGGTTCTATATTGGGAAATGATTCTACTAACAGAGCACTTGCTACAGTCTTGAATCAGCAGTTCATTATCCAACTTGGTGTGTTCACTGCCCTTCCAATGATAGTGGAGAATTCCCTTGAACATGGATTCCTTCATGCTATTTGGGATTTCTTGACGATGCAGCTCCAGCTTTCATCAGTTTTCTACACATTCTCAATGGGAACTCGTACCCACTTTTTTGGGCGAACTATTCTTCATGGTGGTGCAAAGTATCGTGCAACTGGACGTGGCTTTGTTGTGCAGCACAAGAGTTTCGCAGAGAATTATAGGCTCTATGCTCGTAGTCATTTTGTGAAAGCAATTGAACTAGGGTTGATACTTATTGTTTATGCATCGCATAGTCCTGTAGCTAAGGACACTTTTATTTACATAGGCATGACCATCACGAGTTGGTTCCTGGTCGTGTCATGGTTATTGGCCCCCTTCGTTTTCAATCCTTCTGGCTTTGATTGGTTGAAGACTGTAGATGACTTTGATGACTTCATGACCTGGATTTGGTATCGTGGCAGTGTCTTCGCAAAAGCTGAACAGAGCTGGGAAAGATGGTGGTATGAGGAGCAAGATCGATCTAAGGACCACTGGCCTCTGGGGAAAGTTTCTAGAGATAATTTTAGACCTGCGCTTCTTCTTTTTCCAATATGGGATTGTATACCAGCTTGGTATTGCTGCTGGAAGTACCAGTATTGCTGTTTACTTGTTGTCTTGGATCTATGTGTTTGTGGCTTTTGGCATTTTTGTGGTGATAGCATATGCTCGGGACAGATATGCCTCAAAAGATCACATTTACTATCGGCTGGTGCAATTTCTTGTCATAAAACTTGGATTACTTGTTATGATTGCCCTGCTGGAATTCACCGAGTTCAAGTTCATAGATATTTTCACTAG

Protein Analysis

1778

Amino Acids

206.71

Weight (kDa)

8.86

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 255 - 367 7.6e-45 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 780 - 963 6.8e-30 Callose synthase 1 domain
Glucan_synthase PF02364 971 - 1674 3.4e-260 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014998)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03550
fragaria_vesca FvH4_6g26200
malus_domestica MD09G1247400.v1.1 MD17G1240300.v1.1
prunus_persica Prupe.3G138400_v2.0.a1
pyrus_communis pycom17g24360
rosa_chinensis RchiOBHm_Chr2g0126481
rosa_laevigata RLG00000018906
rosa_multiflora Rmu_sc0000662.1_g000007
rosa_roxburghii Rroxscaffold_2G00117140
rosa_rugosa Rorug02G0263500
rosa_samantha Rh2AG320100 Rh2BG328800 Rh2CG308500 Rh2DG348100
rosa_wichuraiana Rw2G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2181
Acc16I TGCGCA 1 cut(s) 3155
Acc36I ACCTGC 4 cut(s) 795, 1300, 2851, 5074
AccB1I GGYRCC 1 cut(s) 635
AccB7I CCANNNNNTGG 1 cut(s) 717
AccI GTMKAC 3 cut(s) 926, 4364, 5098
AccII CGCG 4 cut(s) 95, 423, 444, 558
AccIII TCCGGA 2 cut(s) 654, 3870
AclWI GGATC 6 cut(s) 728, 1226, 2828, 3343, 3530, 5163
AcoI YGGCCR 2 cut(s) 858, 1702
AcuI CTGAAG 4 cut(s) 2236, 2935, 2995, 3305
AflII CTTAAG 1 cut(s) 1841
AflIII ACRYGT 2 cut(s) 774, 1665
AgeI ACCGGT 1 cut(s) 2145
AjiI CACGTC 1 cut(s) 4676
AjuI GAANNNNNNNTTGG 2 cut(s) 863, 895
AleI CACNNNNGTG 1 cut(s) 4319
AloI GAACNNNNNNTCC 4 cut(s) 929, 961, 4521, 4553
Alw21I GWGCWC 3 cut(s) 564, 692, 4447
Alw26I GTCTC 4 cut(s) 191, 971, 1400, 3925
AlwI GGATC 6 cut(s) 728, 1226, 2828, 3343, 3530, 5163
AlwNI CAGNNNCTG 2 cut(s) 2451, 2792
Ama87I CYCGRG 4 cut(s) 413, 2892, 4056, 5203
Aor13HI TCCGGA 2 cut(s) 654, 3870
ApaI GGGCCC 1 cut(s) 3283
ArsI GACNNNNNNTTYG 2 cut(s) 3794, 3826
AsiGI ACCGGT 1 cut(s) 2145
Asp700I GAANNNNTTC 4 cut(s) 944, 3582, 4161, 4429
AsuC2I CCSGG 3 cut(s) 47, 611, 761
AsuHPI GGTGA 7 cut(s) 35, 1561, 3390, 3782, 3958, 5201, 5294
AvaI CYCGRG 4 cut(s) 413, 2892, 4056, 5203
AvaII GGWCC 7 cut(s) 496, 1179, 1524, 1603, 3249, 3707, 5023
BaeGI GKGCMC 1 cut(s) 3283
BalI TGGCCA 1 cut(s) 860
BanI GGYRCC 1 cut(s) 635
BanII GRGCYC 3 cut(s) 357, 1419, 3283
BarI GAAGNNNNNNTAC 2 cut(s) 1646, 1678
BauI CACGAG 2 cut(s) 3765, 4834
BbsI GAAGAC 4 cut(s) 1163, 4107, 4913, 4954
Bbv12I GWGCWC 3 cut(s) 564, 692, 4447
BceAI ACGGC 7 cut(s) 431, 447, 623, 907, 1689, 2189, 2619
BcgI CGANNNNNNTGC 2 cut(s) 4945, 4979
BciVI GTATCC 1 cut(s) 320
BclI TGATCA 3 cut(s) 2557, 2631, 3658
BcnI CCSGG 3 cut(s) 47, 611, 761
BcoDI GTCTC 4 cut(s) 191, 971, 1400, 3925
BfaI CTAG 8 cut(s) 1134, 3246, 3348, 3420, 4227, 4757, 5049, 5332
BfmI CTRYAG 9 cut(s) 2693, 2796, 2854, 3031, 4264, 4317, 4452, 4794, 4911
BfoI RGCGCY 5 cut(s) 760, 2452, 2609, 2872, 3859
BfrI CTTAAG 1 cut(s) 1841
BfuAI ACCTGC 4 cut(s) 795, 1300, 2851, 5074
BfuI GTATCC 1 cut(s) 320
BglII AGATCT 1 cut(s) 876
BmcAI AGTACT 2 cut(s) 2746, 3635
Bme18I GGWCC 7 cut(s) 496, 1179, 1524, 1603, 3249, 3707, 5023
BmeT110I CYCGRG 4 cut(s) 413, 2892, 4056, 5203
BmgBI CACGTC 1 cut(s) 4676
BmiI GGNNCC 8 cut(s) 354, 637, 2775, 3281, 3916, 4379, 4844, 4869
BmrI ACTGGG 2 cut(s) 1170, 2909
BmuI ACTGGG 2 cut(s) 1170, 2909
BpiI GAAGAC 4 cut(s) 1163, 4107, 4913, 4954
BpmI CTGGAG 3 cut(s) 1087, 1223, 4559
Bpu10I CCTNAGC 2 cut(s) 1091, 4800
BpuEI CTTGAG 8 cut(s) 653, 1658, 1732, 2306, 2588, 2945, 2973, 3933
BpuMI CCSGG 3 cut(s) 47, 611, 761
Bsa29I ATCGAT 1 cut(s) 5014
BsaAI YACGTR 1 cut(s) 775
BsaWI WCCGGW 4 cut(s) 654, 729, 2145, 3870
Bse118I RCCGGY 2 cut(s) 2145, 4380
Bse3DI GCAATG 2 cut(s) 2362, 4127
BseAI TCCGGA 2 cut(s) 654, 3870
BseCI ATCGAT 1 cut(s) 5014
BseMI GCAATG 2 cut(s) 2362, 4127
BseRI GAGGAG 9 cut(s) 322, 374, 491, 1280, 1310, 1957, 2134, 3830, 5018
BseSI GKGCMC 1 cut(s) 3283
BseYI CCCAGC 2 cut(s) 179, 4983
BsgI GTGCAG 2 cut(s) 1328, 4709
Bsh1236I CGCG 4 cut(s) 95, 423, 444, 558
Bsh1285I CGRYCG 1 cut(s) 730
BshNI GGYRCC 1 cut(s) 635
BshTI ACCGGT 1 cut(s) 2145
BshVI ATCGAT 1 cut(s) 5014
BsiEI CGRYCG 1 cut(s) 730
BsiHKAI GWGCWC 3 cut(s) 564, 692, 4447
BsiHKCI CYCGRG 4 cut(s) 413, 2892, 4056, 5203
BsiSI CCGG 9 cut(s) 47, 313, 611, 655, 730, 760, 2146, 3871, 4381
BsiWI CGTACG 1 cut(s) 3068
BslFI GGGAC 5 cut(s) 450, 809, 1027, 2909, 5220
BsmAI GTCTC 4 cut(s) 191, 971, 1400, 3925
BsmBI CGTCTC 2 cut(s) 971, 3925
BsmFI GGGAC 5 cut(s) 450, 809, 1027, 2909, 5220
BsmI GAATGC 3 cut(s) 946, 1386, 4014
BsoBI CYCGRG 4 cut(s) 413, 2892, 4056, 5203
Bsp120I GGGCCC 1 cut(s) 3279
Bsp1286I GDGCHC 6 cut(s) 357, 564, 692, 1419, 3283, 4447
Bsp13I TCCGGA 2 cut(s) 654, 3870
Bsp1407I TGTACA 2 cut(s) 3048, 3447
Bsp19I CCATGG 1 cut(s) 861
BspDI ATCGAT 1 cut(s) 5014
BspEI TCCGGA 2 cut(s) 654, 3870
BspFNI CGCG 4 cut(s) 95, 423, 444, 558
BspHI TCATGA 2 cut(s) 3457, 4932
BspLI GGNNCC 8 cut(s) 354, 637, 2775, 3281, 3916, 4379, 4844, 4869
BspMAI CTGCAG 2 cut(s) 2697, 2800
BspMI ACCTGC 4 cut(s) 795, 1300, 2851, 5074
BspPI GGATC 6 cut(s) 728, 1226, 2828, 3343, 3530, 5163
BspQI GCTCTTC 2 cut(s) 1433, 2082
BspT107I GGYRCC 1 cut(s) 635
BspTI CTTAAG 1 cut(s) 1841
BsrDI GCAATG 2 cut(s) 2362, 4127
BsrFI RCCGGY 2 cut(s) 2145, 4380
BsrGI TGTACA 2 cut(s) 3048, 3447
BssAI RCCGGY 2 cut(s) 2145, 4380
BssNAI GTATAC 2 cut(s) 4365, 5099
BssSI CACGAG 2 cut(s) 3765, 4834
BssT1I CCWWGG 4 cut(s) 861, 1619, 3969, 4218
Bst1107I GTATAC 2 cut(s) 4365, 5099
Bst2BI CACGAG 2 cut(s) 3765, 4834
Bst6I CTCTTC 5 cut(s) 205, 524, 1433, 2082, 3840
BstAFI CTTAAG 1 cut(s) 1841
BstAPI GCANNNNNTGC 1 cut(s) 1366
BstAUI TGTACA 2 cut(s) 3048, 3447
BstBAI YACGTR 1 cut(s) 775
BstDSI CCRYGG 3 cut(s) 861, 1280, 1705
BstEII GGTNACC 1 cut(s) 3396
BstFNI CGCG 4 cut(s) 95, 423, 444, 558
BstH2I RGCGCY 5 cut(s) 760, 2452, 2609, 2872, 3859
BstMAI GTCTC 4 cut(s) 191, 971, 1400, 3925
BstMCI CGRYCG 1 cut(s) 730
BstNSI RCATGY 5 cut(s) 1151, 1669, 2624, 2977, 3504
BstPI GGTNACC 1 cut(s) 3396
BstSFI CTRYAG 9 cut(s) 2693, 2796, 2854, 3031, 4264, 4317, 4452, 4794, 4911
BstSLI GKGCMC 1 cut(s) 3283
BstUI CGCG 4 cut(s) 95, 423, 444, 558
BstV2I GAAGAC 4 cut(s) 1163, 4107, 4913, 4954
BstX2I RGATCY 4 cut(s) 720, 876, 3535, 5155
BstXI CCANNNNNNTGG 2 cut(s) 3512, 4628
BstYI RGATCY 4 cut(s) 720, 876, 3535, 5155
BstZ17I GTATAC 2 cut(s) 4365, 5099
Bsu15I ATCGAT 1 cut(s) 5014
BsuI GTATCC 1 cut(s) 320
BsuTUI ATCGAT 1 cut(s) 5014
BtgI CCRYGG 3 cut(s) 861, 1280, 1705
BtgZI GCGATG 1 cut(s) 4767
BtrI CACGTC 1 cut(s) 4676
BtsI GCAGTG 3 cut(s) 1902, 4494, 4963
BveI ACCTGC 4 cut(s) 795, 1300, 2851, 5074
CaiI CAGNNNCTG 2 cut(s) 2451, 2792
CciI TCATGA 2 cut(s) 3457, 4932
Cfr10I RCCGGY 2 cut(s) 2145, 4380
ClaI ATCGAT 1 cut(s) 5014
CseI GACGC 3 cut(s) 1507, 2943, 3782
CsiI ACCWGGT 3 cut(s) 2199, 2213, 2676
CspAI ACCGGT 1 cut(s) 2145
CspCI CAANNNNNGTGG 4 cut(s) 2661, 2696, 4494, 4529
DraI TTTAAA 2 cut(s) 2596, 2653
EaeI YGGCCR 2 cut(s) 858, 1702
Eam1104I CTCTTC 5 cut(s) 205, 524, 1433, 2082, 3840
EarI CTCTTC 5 cut(s) 205, 524, 1433, 2082, 3840
EciI GGCGGA 1 cut(s) 449
Eco130I CCWWGG 4 cut(s) 861, 1619, 3969, 4218
Eco24I GRGCYC 3 cut(s) 357, 1419, 3283
Eco32I GATATC 1 cut(s) 1051
Eco47I GGWCC 7 cut(s) 496, 1179, 1524, 1603, 3249, 3707, 5023
Eco57I CTGAAG 4 cut(s) 2236, 2935, 2995, 3305
Eco88I CYCGRG 4 cut(s) 413, 2892, 4056, 5203
Eco91I GGTNACC 1 cut(s) 3396
EcoO109I RGGNCCY 3 cut(s) 1179, 2698, 3280
EcoO65I GGTNACC 1 cut(s) 3396
EcoRI GAATTC 2 cut(s) 4519, 5298
EcoRV GATATC 1 cut(s) 1051
EcoT14I CCWWGG 4 cut(s) 861, 1619, 3969, 4218
EcoT22I ATGCAT 2 cut(s) 4014, 4783
EcoT38I GRGCYC 3 cut(s) 357, 1419, 3283
ErhI CCWWGG 4 cut(s) 861, 1619, 3969, 4218
Esp3I CGTCTC 2 cut(s) 971, 3925
FaqI GGGAC 5 cut(s) 450, 809, 1027, 2909, 5220
FauI CCCGC 3 cut(s) 132, 309, 4125
FauNDI CATATG 2 cut(s) 3490, 5198
FbaI TGATCA 3 cut(s) 2557, 2631, 3658
FblI GTMKAC 3 cut(s) 926, 4364, 5098
FriOI GRGCYC 3 cut(s) 357, 1419, 3283
FspBI CTAG 8 cut(s) 1134, 3246, 3348, 3420, 4227, 4757, 5049, 5332
FspI TGCGCA 1 cut(s) 3155
GsaI CCCAGC 2 cut(s) 183, 4987
GsuI CTGGAG 3 cut(s) 1087, 1223, 4559
HaeII RGCGCY 5 cut(s) 760, 2452, 2609, 2872, 3859
HapII CCGG 9 cut(s) 47, 313, 611, 655, 730, 760, 2146, 3871, 4381
HgaI GACGC 3 cut(s) 1507, 2943, 3782
HincII GTYRAC 5 cut(s) 91, 927, 2920, 3124, 3192
HindII GTYRAC 5 cut(s) 91, 927, 2920, 3124, 3192
HindIII AAGCTT 2 cut(s) 2466, 4074
HpaI GTTAAC 2 cut(s) 91, 2920
HpaII CCGG 9 cut(s) 47, 313, 611, 655, 730, 760, 2146, 3871, 4381
HphI GGTGA 7 cut(s) 35, 1561, 3390, 3782, 3958, 5201, 5294
Hpy99I CGWCG 4 cut(s) 89, 341, 928, 2605
HpyCH4IV ACGT 5 cut(s) 87, 162, 543, 774, 4675
HpySE526I ACGT 5 cut(s) 87, 162, 543, 774, 4675
Kpn2I TCCGGA 2 cut(s) 654, 3870
KroI GCCGGC 1 cut(s) 4380
KroNI GCCGGC 1 cut(s) 4382
Ksp22I TGATCA 3 cut(s) 2557, 2631, 3658
KspAI GTTAAC 2 cut(s) 91, 2920
LguI GCTCTTC 2 cut(s) 1433, 2082
LmnI GCTCC 9 cut(s) 352, 695, 763, 1171, 1200, 2407, 4240, 4578, 5005
MabI ACCWGGT 3 cut(s) 2199, 2213, 2676
MaeI CTAG 8 cut(s) 1134, 3246, 3348, 3420, 4227, 4757, 5049, 5332
MaeII ACGT 5 cut(s) 87, 162, 543, 774, 4675
MfeI CAATTG 2 cut(s) 2030, 4749
MflI RGATCY 4 cut(s) 720, 876, 3535, 5155
MhlI GDGCHC 6 cut(s) 357, 564, 692, 1419, 3283, 4447
MlsI TGGCCA 1 cut(s) 860
MluNI TGGCCA 1 cut(s) 860
MlyI GAGTC 6 cut(s) 341, 2834, 2891, 3434, 3900, 4048
MmeI TCCRAC 6 cut(s) 360, 750, 1272, 2220, 4168, 4504
Mox20I TGGCCA 1 cut(s) 860
Mph1103I ATGCAT 2 cut(s) 4014, 4783
MroI TCCGGA 2 cut(s) 654, 3870
MroNI GCCGGC 1 cut(s) 4380
MroXI GAANNNNTTC 4 cut(s) 944, 3582, 4161, 4429
MscI TGGCCA 1 cut(s) 860
MslI CAYNNNNRTG 9 cut(s) 860, 3462, 3546, 4026, 4319, 4372, 4650, 4823, 5184
Msp20I TGGCCA 1 cut(s) 860
MspA1I CMGCKG 4 cut(s) 183, 684, 1948, 2755
MspCI CTTAAG 1 cut(s) 1841
MspI CCGG 9 cut(s) 47, 313, 611, 655, 730, 760, 2146, 3871, 4381
MunI CAATTG 2 cut(s) 2030, 4749
Mva1269I GAATGC 3 cut(s) 946, 1386, 4014
MvnI CGCG 4 cut(s) 95, 423, 444, 558
NaeI GCCGGC 1 cut(s) 4382
NciI CCSGG 3 cut(s) 47, 611, 761
NcoI CCATGG 1 cut(s) 861
NdeI CATATG 2 cut(s) 3490, 5198
NgoMIV GCCGGC 1 cut(s) 4380
NlaIV GGNNCC 8 cut(s) 354, 637, 2775, 3281, 3916, 4379, 4844, 4869
NmeAIII GCCGAG 1 cut(s) 1015
NmuCI GTSAC 7 cut(s) 49, 777, 3396, 3770, 3964, 4144, 4274
NsbI TGCGCA 1 cut(s) 3155
NsiI ATGCAT 2 cut(s) 4014, 4783
NspI RCATGY 5 cut(s) 1151, 1669, 2624, 2977, 3504
OliI CACNNNNGTG 1 cut(s) 4319
PaeI GCATGC 2 cut(s) 2624, 3504
PaeR7I CTCGAG 1 cut(s) 4056
PagI TCATGA 2 cut(s) 3457, 4932
PciI ACATGT 1 cut(s) 1665
PciSI GCTCTTC 2 cut(s) 1433, 2082
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PctI GAATGC 3 cut(s) 946, 1386, 4014
PdiI GCCGGC 1 cut(s) 4382
PdmI GAANNNNTTC 4 cut(s) 944, 3582, 4161, 4429
Pfl23II CGTACG 1 cut(s) 3068
PflFI GACNNNGTC 1 cut(s) 542
PflMI CCANNNNNTGG 1 cut(s) 717
PinAI ACCGGT 1 cut(s) 2145
PleI GAGTC 6 cut(s) 341, 2833, 2891, 3434, 3899, 4048
PpsI GAGTC 6 cut(s) 341, 2833, 2891, 3434, 3899, 4048
Ppu21I YACGTR 1 cut(s) 775
PpuMI RGGWCCY 1 cut(s) 1179
PscI ACATGT 1 cut(s) 1665
PsiI TTATAA 1 cut(s) 2181
Psp5II RGGWCCY 1 cut(s) 1179
PspEI GGTNACC 1 cut(s) 3396
PspFI CCCAGC 2 cut(s) 179, 4983
PspLI CGTACG 1 cut(s) 3068
PspN4I GGNNCC 8 cut(s) 354, 637, 2775, 3281, 3916, 4379, 4844, 4869
PspOMI GGGCCC 1 cut(s) 3279
PspPPI RGGWCCY 1 cut(s) 1179
PspXI VCTCGAGB 1 cut(s) 4056
PsrI GAACNNNNNNTAC 4 cut(s) 1733, 1765, 2773, 2805
PstI CTGCAG 2 cut(s) 2697, 2800
PstNI CAGNNNCTG 2 cut(s) 2451, 2792
PsuI RGATCY 4 cut(s) 720, 876, 3535, 5155
PsyI GACNNNGTC 1 cut(s) 542
PvuII CAGCTG 4 cut(s) 183, 684, 1948, 2755
RseI CAYNNNNRTG 9 cut(s) 860, 3462, 3546, 4026, 4319, 4372, 4650, 4823, 5184
SalI GTCGAC 1 cut(s) 925
SapI GCTCTTC 2 cut(s) 1433, 2082
ScaI AGTACT 2 cut(s) 2746, 3635
SchI GAGTC 6 cut(s) 341, 2834, 2891, 3434, 3900, 4048
SduI GDGCHC 6 cut(s) 357, 564, 692, 1419, 3283, 4447
SexAI ACCWGGT 3 cut(s) 2199, 2213, 2676
SfcI CTRYAG 9 cut(s) 2693, 2796, 2854, 3031, 4264, 4317, 4452, 4794, 4911
Sfr274I CTCGAG 1 cut(s) 4056
SinI GGWCC 7 cut(s) 496, 1179, 1524, 1603, 3249, 3707, 5023
SlaI CTCGAG 1 cut(s) 4056
SmiMI CAYNNNNRTG 9 cut(s) 860, 3462, 3546, 4026, 4319, 4372, 4650, 4823, 5184
SphI GCATGC 2 cut(s) 2624, 3504
SspMI CTAG 8 cut(s) 1134, 3246, 3348, 3420, 4227, 4757, 5049, 5332
StyI CCWWGG 4 cut(s) 861, 1619, 3969, 4218
TaiI ACGT 5 cut(s) 90, 165, 546, 777, 4678
TatI WGTACW 8 cut(s) 1740, 2442, 2744, 3048, 3267, 3447, 3633, 3849
TauI GCSGC 5 cut(s) 431, 434, 749, 809, 1247
TseFI GTSAC 7 cut(s) 49, 777, 3396, 3770, 3964, 4144, 4274
Tsp45I GTSAC 7 cut(s) 49, 777, 3396, 3770, 3964, 4144, 4274
TspGWI ACGGA 6 cut(s) 5, 395, 1269, 3056, 3086, 3907
Tth111I GACNNNGTC 1 cut(s) 542
Van91I CCANNNNNTGG 1 cut(s) 717
Vha464I CTTAAG 1 cut(s) 1841
VpaK11BI GGWCC 7 cut(s) 496, 1179, 1524, 1603, 3249, 3707, 5023
XbaI TCTAGA 1 cut(s) 5048
XceI RCATGY 5 cut(s) 1151, 1669, 2624, 2977, 3504
XcmI CCANNNNNNNNNTGG 1 cut(s) 2310
XhoI CTCGAG 1 cut(s) 4056
XmiI GTMKAC 3 cut(s) 926, 4364, 5098
XmnI GAANNNNTTC 4 cut(s) 944, 3582, 4161, 4429
XspI CTAG 8 cut(s) 1134, 3246, 3348, 3420, 4227, 4757, 5049, 5332
ZrmI AGTACT 2 cut(s) 2746, 3635
Zsp2I ATGCAT 2 cut(s) 4014, 4783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.