pycom17g27000
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
25261316 .. 25263418
2103 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g27000.4

Sequence Viewer

Length: 1545 bp
ATGGGATTCGAACCGATTGGGTTATGCATGAATATCGCCTCGACGAGAGGGAGTGCGAAACTTTTGAAATTTCATGGTAATAAAAACCCTCATGCAATTAATTACAGATTTTTGAAACATATATATGCATTCGTACAGGACGCATATGCGCTATGCCGTATTTTTAAGAAGACTGCAACGGGGCCAAAGATAGGAGAGCATTATGGTAGCACAAGTACTACTAGTTACCAGCTAACCAGTGACCATTCATCTAGCGTTAATGAACTGTATTCTGATGGAGGAAGATGTGAAGATTTCGAGAGCTCAAGTTATCCGATGCAAATGAACAATGCATGCTCTTCATCACCAAACTTTGTTCATACAAACTCACTTGATGACATGGGTAGAAAAAGAGATGGAAAATGGACACAGTTCTTATCGAAAGACGCTTTTAATTGCTCGTCCTCATTTTCTCATATTTCTACACATGGAAACATTGCCTACCCTCCATCTAAGGTTGATATTGCATTAGAATGTGCAAGGCTGCAGCATCGACTCTCACTTCCTCCATTAGAAGTGGAGGATTTCTCTCAAGTTGGACTCACCGACTTCAAAACGATGCAATACTCAAATCCTATACCTGACACCACAAGTACTGAAACTGATGCTTTGCAGGAAATTCTCTCAGTTGCACATGTTTCTCAAGAAATGATCAATCAATCCAGTAATCTTGTGGATCAGACATGGGGTGGAAACTATGCTCCTCCAGCCAATGACTTTAGCTTTATGGTTGACCGAGATGCTCAGTATAATCAGATTACTGGTCACATGAATTCTATGAGATATGTGGATGACAAAACATGGGGAAATTCGTATACACGGTCAATCGAGATTGGAGACCTGGAGGATGATTTTAGGATGGACAATACAGACGAGAATCTAAGATGGATAGGAATGTCAGACAAAGATCTGGAGAAGGTATATTACAATTTAACTTATCAACTTACCATCCATCATACTTGGCGCGTTATTGCAATTCTTCTTTATTTTCGGCTAACAAAAGATTCAATTGCAGGAGAAACCGGGCATCATAGTGGCTTAATCAAGGAACTCAATGATAATGAGGCAAATGATGATGATTTCTCACTTAGTTTCATCAATGAAGACCCGAACGAGAACTTCCTCCATGATGGAAACATGGATGATTATTCACCTTCTCCAAGCTTTGAAGTCATCGAAGAAATTCAAGTTAATCACGGCATGTTTGTTTCAACTCGGCAGGTGGCTGAAACATTCTTTCACCAGTTAATGCCTTCACAAACAGTTAAGGTCCATCTAAACCCAGTTTTCGGCCAGAACTTTTTTGTAGAGAGAGTTGTTGCGCAAAAAAAGTCTGAGGATAGAGGTTCTTTGTTTGAGAGGTCCAAGGAACTTGTGATGGAAAAGTTCGACGGAATTGCCAAATCAACAAGGCCATGGAGGAAAATTGCAAGCACTCTTGTTTGTGCAGTTACACTTATATTGATGCACATCGATCTTCTCTCTTGGGCAACATATGGAAGATGA

Protein Analysis

515

Amino Acids

58.4

Weight (kDa)

5.36

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1249
Acc16I TGCGCA 1 cut(s) 1362
Acc36I ACCTGC 1 cut(s) 1249
AccI GTMKAC 1 cut(s) 854
AccII CGCG 1 cut(s) 1005
AclWI GGATC 1 cut(s) 723
AcoI YGGCCR 1 cut(s) 1330
AcsI RAATTY 5 cut(s) 68, 657, 811, 847, 1221
AfaI GTAC 3 cut(s) 135, 217, 634
AfiI CCNNNNNNNGG 2 cut(s) 191, 1328
AflIII ACRYGT 1 cut(s) 673
AgsI TTSAA 7 cut(s) 67, 115, 592, 1047, 1208, 1226, 1251
AhlI ACTAGT 1 cut(s) 221
AjnI CCWGG 1 cut(s) 879
AluBI AGCT 4 cut(s) 232, 303, 762, 1203
AluI AGCT 4 cut(s) 232, 303, 762, 1203
Alw21I GWGCWC 1 cut(s) 305
Alw26I GTCTC 1 cut(s) 870
AlwI GGATC 1 cut(s) 723
AoxI GGCC 3 cut(s) 182, 1330, 1451
ApeKI GCWGC 2 cut(s) 523, 526
ApoI RAATTY 5 cut(s) 68, 657, 811, 847, 1221
AseI ATTAAT 1 cut(s) 99
Asp700I GAANNNNTTC 1 cut(s) 1221
AspLEI GCGC 3 cut(s) 151, 1005, 1363
AspS9I GGNCC 3 cut(s) 182, 1309, 1401
AsuC2I CCSGG 1 cut(s) 1063
AsuHPI GGTGA 4 cut(s) 336, 574, 1182, 1271
AsuII TTCGAA 1 cut(s) 9
AvaII GGWCC 2 cut(s) 1309, 1401
BanII GRGCYC 1 cut(s) 305
BarI GAAGNNNNNNTAC 2 cut(s) 947, 979
BbsI GAAGAC 2 cut(s) 176, 1149
Bbv12I GWGCWC 1 cut(s) 305
BbvI GCAGC 2 cut(s) 510, 538
BceAI ACGGC 2 cut(s) 141, 1252
BcgI CGANNNNNNTGC 4 cut(s) 16, 50, 1418, 1452
BciT130I CCWGG 1 cut(s) 881
BclI TGATCA 1 cut(s) 690
BcnI CCSGG 1 cut(s) 1063
BcoDI GTCTC 1 cut(s) 870
BcuI ACTAGT 1 cut(s) 221
BfaI CTAG 2 cut(s) 222, 252
BfmI CTRYAG 1 cut(s) 524
BfuAI ACCTGC 1 cut(s) 1249
BglII AGATCT 1 cut(s) 946
BisI GCNGC 2 cut(s) 524, 527
BlsI GCNGC 2 cut(s) 525, 528
BmcAI AGTACT 2 cut(s) 217, 634
Bme1390I CCNGG 2 cut(s) 881, 1063
Bme18I GGWCC 2 cut(s) 1309, 1401
BmgT120I GGNCC 3 cut(s) 182, 1309, 1401
BmiI GGNNCC 1 cut(s) 183
BmrFI CCNGG 2 cut(s) 881, 1063
BmrI ACTGGG 1 cut(s) 1316
BmsI GCATC 7 cut(s) 306, 538, 588, 634, 769, 1075, 1494
BmuI ACTGGG 1 cut(s) 1316
BpiI GAAGAC 2 cut(s) 176, 1149
BplI GAGNNNNNCTC 2 cut(s) 551, 583
BpmI CTGGAG 3 cut(s) 729, 902, 971
Bpu14I TTCGAA 1 cut(s) 9
BpuEI CTTGAG 3 cut(s) 289, 555, 666
BpuMI CCSGG 1 cut(s) 1063
Bsa29I ATCGAT 1 cut(s) 1512
BsaBI GATNNNNATC 1 cut(s) 1508
BsaI GGTCTC 1 cut(s) 870
BsaJI CCNNGG 2 cut(s) 1404, 1454
Bsc4I CCNNNNNNNGG 2 cut(s) 191, 1328
Bse1I ACTGG 5 cut(s) 237, 702, 805, 1282, 1322
Bse3DI GCAATG 1 cut(s) 474
Bse8I GATNNNNATC 1 cut(s) 1508
BseBI CCWGG 1 cut(s) 881
BseCI ATCGAT 1 cut(s) 1512
BseDI CCNNGG 2 cut(s) 1404, 1454
BseGI GGATG 5 cut(s) 835, 892, 903, 987, 1186
BseJI GATNNNNATC 1 cut(s) 1508
BseLI CCNNNNNNNGG 2 cut(s) 191, 1328
BseMI GCAATG 1 cut(s) 474
BseMII CTCAG 3 cut(s) 678, 797, 1365
BseNI ACTGG 5 cut(s) 237, 702, 805, 1282, 1322
BseRI GAGGAG 1 cut(s) 732
BseXI GCAGC 2 cut(s) 510, 538
BsgI GTGCAG 1 cut(s) 1506
Bsh1236I CGCG 1 cut(s) 1005
BshFI GGCC 3 cut(s) 184, 1332, 1453
BshVI ATCGAT 1 cut(s) 1512
BsiHKAI GWGCWC 1 cut(s) 305
BsiSI CCGG 1 cut(s) 1062
BslI CCNNNNNNNGG 2 cut(s) 191, 1328
BsmAI GTCTC 1 cut(s) 870
BsmI GAATGC 1 cut(s) 128
BsnI GGCC 3 cut(s) 184, 1332, 1453
Bso31I GGTCTC 1 cut(s) 870
Bsp119I TTCGAA 1 cut(s) 9
Bsp1286I GDGCHC 1 cut(s) 305
Bsp143I GATC 4 cut(s) 690, 715, 946, 1513
Bsp19I CCATGG 1 cut(s) 1454
BspANI GGCC 3 cut(s) 184, 1332, 1453
BspCNI CTCAG 3 cut(s) 677, 796, 1366
BspDI ATCGAT 1 cut(s) 1512
BspFNI CGCG 1 cut(s) 1005
BspLI GGNNCC 1 cut(s) 183
BspMAI CTGCAG 1 cut(s) 528
BspMI ACCTGC 1 cut(s) 1249
BspPI GGATC 1 cut(s) 723
BspQI GCTCTTC 1 cut(s) 343
BspT104I TTCGAA 1 cut(s) 9
BspTNI GGTCTC 1 cut(s) 870
BsrDI GCAATG 1 cut(s) 474
BsrI ACTGG 5 cut(s) 237, 702, 805, 1282, 1322
BssECI CCNNGG 2 cut(s) 1404, 1454
BssMI GATC 4 cut(s) 690, 715, 946, 1513
BssNAI GTATAC 1 cut(s) 855
BssT1I CCWWGG 2 cut(s) 1404, 1454
Bst1107I GTATAC 1 cut(s) 855
Bst2UI CCWGG 1 cut(s) 881
Bst4CI ACNGT 4 cut(s) 267, 411, 861, 1303
Bst6I CTCTTC 1 cut(s) 343
BstBI TTCGAA 1 cut(s) 9
BstC8I GCNNGC 2 cut(s) 334, 1471
BstDEI CTNAG 6 cut(s) 492, 664, 783, 920, 1127, 1374
BstDSI CCRYGG 1 cut(s) 1454
BstF5I GGATG 5 cut(s) 835, 892, 903, 987, 1186
BstFNI CGCG 1 cut(s) 1005
BstHHI GCGC 3 cut(s) 151, 1005, 1363
BstKTI GATC 4 cut(s) 693, 718, 949, 1516
BstMAI GTCTC 1 cut(s) 870
BstMBI GATC 4 cut(s) 690, 715, 946, 1513
BstMWI GCNNNNNNNGC 1 cut(s) 746
BstNI CCWGG 1 cut(s) 881
BstNSI RCATGY 3 cut(s) 336, 677, 1243
BstSCI CCNGG 2 cut(s) 879, 1061
BstSFI CTRYAG 1 cut(s) 524
BstUI CGCG 1 cut(s) 1005
BstV1I GCAGC 2 cut(s) 510, 538
BstV2I GAAGAC 2 cut(s) 176, 1149
BstX2I RGATCY 1 cut(s) 946
BstYI RGATCY 1 cut(s) 946
BstZ17I GTATAC 1 cut(s) 855
Bsu15I ATCGAT 1 cut(s) 1512
BsuRI GGCC 3 cut(s) 184, 1332, 1453
BsuTUI ATCGAT 1 cut(s) 1512
BtgI CCRYGG 1 cut(s) 1454
BtsCI GGATG 5 cut(s) 835, 892, 903, 987, 1186
BtsIMutI CAGTG 1 cut(s) 244
BveI ACCTGC 1 cut(s) 1249
Cac8I GCNNGC 2 cut(s) 334, 1471
CfoI GCGC 3 cut(s) 151, 1005, 1363
Cfr13I GGNCC 3 cut(s) 182, 1309, 1401
ClaI ATCGAT 1 cut(s) 1512
CseI GACGC 2 cut(s) 149, 434
Csp6I GTAC 3 cut(s) 134, 216, 633
CviQI GTAC 3 cut(s) 134, 216, 633
DdeI CTNAG 6 cut(s) 492, 664, 783, 920, 1127, 1374
DpnI GATC 4 cut(s) 692, 717, 948, 1515
DpnII GATC 4 cut(s) 690, 715, 946, 1513
EaeI YGGCCR 1 cut(s) 1330
Eam1104I CTCTTC 1 cut(s) 343
EarI CTCTTC 1 cut(s) 343
Ecl136II GAGCTC 1 cut(s) 303
Eco130I CCWWGG 2 cut(s) 1404, 1454
Eco24I GRGCYC 1 cut(s) 305
Eco31I GGTCTC 1 cut(s) 870
Eco47I GGWCC 2 cut(s) 1309, 1401
Eco53kI GAGCTC 1 cut(s) 303
EcoICRI GAGCTC 1 cut(s) 303
EcoRI GAATTC 1 cut(s) 811
EcoRII CCWGG 1 cut(s) 879
EcoT14I CCWWGG 2 cut(s) 1404, 1454
EcoT22I ATGCAT 3 cut(s) 29, 130, 334
EcoT38I GRGCYC 1 cut(s) 305
ErhI CCWWGG 2 cut(s) 1404, 1454
FauNDI CATATG 2 cut(s) 145, 1534
FbaI TGATCA 1 cut(s) 690
FblI GTMKAC 1 cut(s) 854
Fnu4HI GCNGC 2 cut(s) 524, 527
FokI GGATG 5 cut(s) 842, 899, 910, 974, 1193
FriOI GRGCYC 1 cut(s) 305
Fsp4HI GCNGC 2 cut(s) 524, 527
FspBI CTAG 2 cut(s) 222, 252
FspI TGCGCA 1 cut(s) 1362
GlaI GCGC 3 cut(s) 150, 1004, 1362
GluI GCNGC 2 cut(s) 524, 527
GsuI CTGGAG 3 cut(s) 729, 902, 971
HaeIII GGCC 3 cut(s) 184, 1332, 1453
HapII CCGG 1 cut(s) 1062
HgaI GACGC 2 cut(s) 149, 434
HhaI GCGC 3 cut(s) 151, 1005, 1363
Hin6I GCGC 3 cut(s) 149, 1003, 1361
HinP1I GCGC 3 cut(s) 149, 1003, 1361
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HindIII AAGCTT 1 cut(s) 1201
HinfI GANTC 5 cut(s) 6, 534, 579, 916, 1043
HpaII CCGG 1 cut(s) 1062
HphI GGTGA 4 cut(s) 336, 574, 1182, 1271
Hpy166II GTNNAC 2 cut(s) 772, 855
Hpy188I TCNGA 6 cut(s) 274, 315, 720, 795, 940, 1375
Hpy188III TCNNGA 4 cut(s) 298, 683, 868, 950
Hpy8I GTNNAC 2 cut(s) 772, 855
Hpy99I CGWCG 2 cut(s) 46, 1433
HpyAV CCTTC 3 cut(s) 949, 1203, 1302
HpyCH4III ACNGT 4 cut(s) 267, 411, 861, 1303
HpyF10VI GCNNNNNNNGC 1 cut(s) 746
HpyF3I CTNAG 6 cut(s) 492, 664, 783, 920, 1127, 1374
HspAI GCGC 3 cut(s) 149, 1003, 1361
Ksp22I TGATCA 1 cut(s) 690
Kzo9I GATC 4 cut(s) 690, 715, 946, 1513
LguI GCTCTTC 1 cut(s) 343
LmnI GCTCC 1 cut(s) 745
Lsp1109I GCAGC 2 cut(s) 510, 538
LweI GCATC 7 cut(s) 306, 538, 588, 634, 769, 1075, 1494
MaeI CTAG 2 cut(s) 222, 252
MaeIII GTNAC 4 cut(s) 224, 239, 803, 1489
MalI GATC 4 cut(s) 692, 717, 948, 1515
MboI GATC 4 cut(s) 690, 715, 946, 1513
MboII GAAGA 8 cut(s) 181, 294, 302, 330, 1010, 1154, 1229, 1508
MfeI CAATTG 1 cut(s) 1047
MflI RGATCY 1 cut(s) 946
MhlI GDGCHC 1 cut(s) 305
MlyI GAGTC 2 cut(s) 528, 573
MmeI TCCRAC 1 cut(s) 556
Mph1103I ATGCAT 3 cut(s) 29, 130, 334
MroXI GAANNNNTTC 1 cut(s) 1221
MseI TTAA 9 cut(s) 99, 165, 258, 432, 971, 1079, 1230, 1286, 1305
MslI CAYNNNNRTG 3 cut(s) 123, 511, 1071
MspI CCGG 1 cut(s) 1062
MspR9I CCNGG 2 cut(s) 881, 1063
MunI CAATTG 1 cut(s) 1047
Mva1269I GAATGC 1 cut(s) 128
MvaI CCWGG 1 cut(s) 881
MvnI CGCG 1 cut(s) 1005
MwoI GCNNNNNNNGC 1 cut(s) 746
NciI CCSGG 1 cut(s) 1063
NcoI CCATGG 1 cut(s) 1454
NdeI CATATG 2 cut(s) 145, 1534
NdeII GATC 4 cut(s) 690, 715, 946, 1513
NlaIV GGNNCC 1 cut(s) 183
NmeAIII GCCGAG 1 cut(s) 1234
NmuCI GTSAC 2 cut(s) 239, 803
NsbI TGCGCA 1 cut(s) 1362
NsiI ATGCAT 3 cut(s) 29, 130, 334
NspI RCATGY 3 cut(s) 336, 677, 1243
NspV TTCGAA 1 cut(s) 9
PaeI GCATGC 1 cut(s) 336
PaqCI CACCTGC 1 cut(s) 1249
PciI ACATGT 1 cut(s) 673
PciSI GCTCTTC 1 cut(s) 343
PctI GAATGC 1 cut(s) 128
PdmI GAANNNNTTC 1 cut(s) 1221
PfeI GAWTC 3 cut(s) 6, 916, 1043
PkrI GCNGC 2 cut(s) 525, 528
PleI GAGTC 2 cut(s) 528, 573
PpsI GAGTC 2 cut(s) 528, 573
PscI ACATGT 1 cut(s) 673
PshBI ATTAAT 1 cut(s) 99
Psp124BI GAGCTC 1 cut(s) 305
Psp6I CCWGG 1 cut(s) 879
PspGI CCWGG 1 cut(s) 879
PspN4I GGNNCC 1 cut(s) 183
PspPI GGNCC 3 cut(s) 182, 1309, 1401
PstI CTGCAG 1 cut(s) 528
PsuI RGATCY 1 cut(s) 946
RsaI GTAC 3 cut(s) 135, 217, 634
RsaNI GTAC 3 cut(s) 134, 216, 633
RseI CAYNNNNRTG 3 cut(s) 123, 511, 1071
SacI GAGCTC 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 343
SaqAI TTAA 9 cut(s) 99, 165, 258, 432, 971, 1079, 1230, 1286, 1305
SatI GCNGC 2 cut(s) 524, 527
Sau3AI GATC 4 cut(s) 690, 715, 946, 1513
Sau96I GGNCC 3 cut(s) 182, 1309, 1401
ScaI AGTACT 2 cut(s) 217, 634
SchI GAGTC 2 cut(s) 528, 573
ScrFI CCNGG 2 cut(s) 881, 1063
SduI GDGCHC 1 cut(s) 305
SfaNI GCATC 7 cut(s) 306, 538, 588, 634, 769, 1075, 1494
SfcI CTRYAG 1 cut(s) 524
SfuI TTCGAA 1 cut(s) 9
SinI GGWCC 2 cut(s) 1309, 1401
SmiMI CAYNNNNRTG 3 cut(s) 123, 511, 1071
SmlI CTYRAG 3 cut(s) 304, 570, 681
SmoI CTYRAG 3 cut(s) 304, 570, 681
SpeI ACTAGT 1 cut(s) 221
SphI GCATGC 1 cut(s) 336
SspMI CTAG 2 cut(s) 222, 252
SstI GAGCTC 1 cut(s) 305
StyD4I CCNGG 2 cut(s) 879, 1061
StyI CCWWGG 2 cut(s) 1404, 1454
TaaI ACNGT 4 cut(s) 267, 411, 861, 1303
TaqI TCGA 9 cut(s) 9, 41, 297, 419, 532, 867, 1215, 1428, 1512
TaqII GACCGA 1 cut(s) 789
TatI WGTACW 2 cut(s) 215, 632
TfiI GAWTC 3 cut(s) 6, 916, 1043
Tru1I TTAA 9 cut(s) 99, 165, 258, 432, 971, 1079, 1230, 1286, 1305
Tru9I TTAA 9 cut(s) 99, 165, 258, 432, 971, 1079, 1230, 1286, 1305
TscAI CASTG 1 cut(s) 244
TseFI GTSAC 2 cut(s) 239, 803
TseI GCWGC 2 cut(s) 523, 526
Tsp45I GTSAC 2 cut(s) 239, 803
TspGWI ACGGA 1 cut(s) 1446
TspRI CASTG 1 cut(s) 244
VpaK11BI GGWCC 2 cut(s) 1309, 1401
VspI ATTAAT 1 cut(s) 99
XapI RAATTY 5 cut(s) 68, 657, 811, 847, 1221
XceI RCATGY 3 cut(s) 336, 677, 1243
XcmI CCANNNNNNNNNTGG 1 cut(s) 709
XmiI GTMKAC 1 cut(s) 854
XmnI GAANNNNTTC 1 cut(s) 1221
XspI CTAG 2 cut(s) 222, 252
ZrmI AGTACT 2 cut(s) 217, 634
Zsp2I ATGCAT 3 cut(s) 29, 130, 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.