Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0008042

Physical Location & Seq

Genomic Coordinates Reverse (-)

14191786 .. 14195694

Gene Structure 3909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00393880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGCTCCTGTTTCATTGCCTCCTGGTTTTCGGTTCCACCCCACAGACGAAGAACTTGTTGCTTATTACCTCAAGAGAAAAATCAACGGCCGAAAGATCGAATTAGAGGTCATCCCTGAAGTTGATCTCTACAAGTGTGAGCCTTGGGACTTACCAGGAAAGTCATTACTACCTAGCAAAGATCTGGAGTGGTATTTCTTCAGTCCTCGAGATCGAAAGTATCCTAATGGATCGAGGACCAATCGTGCAACTAAGGCCGGATATTGGAAGGCAACCGGAAAGGACCGCAAAGTAAACTCACAGACACGGGCTGTAGGCATGAAGAAAACCCTAGTTTATTACAGAGGAAGAGCACCCCATGGCATACGAACTGATTGGGTTATGCATGAATATCGTCTCGACGAGAGGGAGTGTGAAACTGCACAAGGCTTGCAGGTTCAGGATGCATATGCGCTTTGCCGTATTTTTAAGAAGACTGCAACTGGGCCAAAGATAGGAGAGCATTATGGTAGCACAAGTAGTACTACTAATTATCAACTTGCTAGTGACCACTATTCGTCTAGCGTTGAGCTATACTCTGATTCAAGAGGTGATCAAGATTTTGAGAGCTCCCGCTACAATAATCAGATGGCAATGAATACTCCATGCTCTTCAAACATGGTTCATACATCCTCTTCATCTTCTTTTGATAATATGGGTAGAAAGAGAGATGGAAAATGGACCCAGTTCTTATCGAAGGACGCATTTAATAGCTTTTCCTCATTTCCCAATCAGGGAGCCATTTCTTACCCTACATCTAAGGTTGATATAGCATTGGAGTGTGCAAGGCTGCAGCATCGGCTCACACTTCCTCCGTTAGAAGTGGAGGATTTCCCTCATGTTGGGTTTACCGACTTCAAAACCATGCAATATTCAGATCCTGGACTTGAGGGCACAGGTACAGAAACTGATGCGTTGCAAGAAATTCTCTCAGTTGCGCATGTTTCTCAAGAAATGATAAATCAGTCCAATAATTTTGCGGATCAAACATGGGGTTCTGCAAACTATGCTCCAGGAGCCAATGATTTCAGCTTTATGGTTGACAGAGATGCTCACTATAATCAGATTACAACTCATCATGATATGAATCCTATGAGATATGTGGACAAGCCGTGGGAAAATTCATATATTAGATCAATTGAAATTGGAGATTTGGAGGATGATGATTTCAGGACAGACAATACAACGGAGAATCTGAGGTGGATAGGAATGTCAGACAAAGATTTGGAGAAGAGTTTCACAGAAGAACACAAGATAGTTCCAATCGAAAACATTGCAAGCTTTCGGAGGGAAGAGCAAGGGCATGAGGTTCAAGGAGATCAAACTGAGCATCATAGAGGCATGATTAAGGAATTCAATGATAGTGAGACAAATGACTTCTCACTTGGATTCATCAATGATGACCCAGATGGGAACTTCCTCCATGATGGCGGCATGGAAGCAGATTATTCGCCTTCCCCGAGTTTTGAAGTCATTGAGGAAATTCAAGTTAATCATGGAATGTTTGTTTCAACCCGTCAAGTGGCTGAGACATTTTTTCAACAGATAATGCCTTCAGAAACAGTTAAGGTCCATCTAAATCCAGTATTGGTCCACTCCTCCTTGGTCGAAAAAGTTGATGATGCGCAAGAAAAACCTAAGAACATTAAAGGTTCTTTCTTTGAAATGTTCAAGGAATTCGTGATGGAAAAGTTTGTGGGAGTTACAAGATCAACGAATCCATGGAGGAAAATGGCAAGTGCCATGGTTTTTGCTGTTACACTGCTGTTGATGCACACCATTTATGTTGGGGAACGTATGGAAGATGAGAAATTGATGGATACCTTCAGTACTACAACCACAACCACTGCTATTGTGATGGAAGGAAAAGTTACCTCTAACATTATCAGCAACAAGAAAAAGGTTTGCTTGGTGAATATAAGAGGTGGGAGTAGTTGTAGCTTGTTTCTGAAGAAGATAGGGATTTTCCTCACTGTGTCTTTGGCTCTTTGTACCATGTGGGCTAACCACAATATAATTACATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0022411 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0090601 GO:0090602 GO:0090603 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

688

Amino Acids

78.36

Weight (kDa)

5.55

Isoelectric Point (pI)

37.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	7 - 133	2.7e-51	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008042)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65910
fragaria_vesca	FvH4_1g27330 FvH4_1g27330 FvH4_1g27330
malus_domestica	MD06G1236800.v1.1 MD09G1279900.v1.1 MD17G1286600.v1.1
prunus_persica	Prupe.3G014400_v2.0.a1 Prupe.3G014400_v2.0.a1 Prupe.3G014400_v2.0.a1 Prupe.3G014400_v2.0.a1
pyrus_communis	pycom09g18810 pycom17g27000
rosa_chinensis	RchiOBHm_Chr3g0488761
rosa_laevigata	RLG00000022923
rosa_multiflora	Rmu_sc0006246.1_g000001
rosa_roxburghii	Rroxscaffold_6G00393880
rosa_rugosa	Rorug03G0241500 Rorug03G0241500
rosa_samantha	Rh3AG289600 Rh3BG326600 Rh3CG324100 Rh3DG322500
rosa_wichuraiana	Rw3G025650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	978, 1665
Acc36I	ACCTGC	1 cut(s)	424
AciI	CCGC	4 cut(s)	286, 613, 1019, 1470
AclWI	GGATC	3 cut(s)	238, 911, 1029
AcoI	YGGCCR	1 cut(s)	88
AcsI	RAATTY	5 cut(s)	963, 1159, 1391, 1521, 1715
AcuI	CTGAAG	5 cut(s)	138, 184, 1578, 1849, 2009
AfaI	GTAC	4 cut(s)	523, 940, 1870, 2032
AfiI	CCNNNNNNNGG	5 cut(s)	264, 494, 773, 881, 1561
AjnI	CCWGG	4 cut(s)	22, 154, 919, 1051
AluBI	AGCT	6 cut(s)	571, 609, 753, 1071, 1320, 1980
AluI	AGCT	6 cut(s)	571, 609, 753, 1071, 1320, 1980
Alw21I	GWGCWC	2 cut(s)	355, 611
Alw26I	GTCTC	3 cut(s)	401, 1400, 1562
AlwI	GGATC	3 cut(s)	238, 911, 1029
AlwNI	CAGNNNCTG	2 cut(s)	920, 947
Ama87I	CYCGRG	2 cut(s)	207, 1498
AoxI	GGCC	3 cut(s)	88, 255, 485
ApeKI	GCWGC	2 cut(s)	829, 832
ApoI	RAATTY	5 cut(s)	963, 1159, 1391, 1521, 1715
ArsI	GACNNNNNNTTYG	2 cut(s)	93, 125
Asp700I	GAANNNNTTC	1 cut(s)	1274
AspLEI	GCGC	3 cut(s)	454, 979, 1666
AspS9I	GGNCC	6 cut(s)	237, 283, 485, 720, 1609, 1630
AsuHPI	GGTGA	2 cut(s)	602, 1963
AvaI	CYCGRG	2 cut(s)	207, 1498
AvaII	GGWCC	5 cut(s)	237, 283, 720, 1609, 1630
BaeGI	GKGCMC	1 cut(s)	935
BanII	GRGCYC	1 cut(s)	611
BbsI	GAAGAC	1 cut(s)	479
Bbv12I	GWGCWC	2 cut(s)	355, 611
BbvI	GCAGC	2 cut(s)	816, 844
BccI	CCATC	8 cut(s)	622, 704, 1442, 1460, 1620, 1717, 1849, 1891
BceAI	ACGGC	3 cut(s)	103, 444, 1135
BcgI	CGANNNNNNTGC	6 cut(s)	374, 408, 1295, 1329, 1470, 1504
BciT130I	CCWGG	4 cut(s)	24, 156, 921, 1053
BciVI	GTATCC	2 cut(s)	231, 1852
BclI	TGATCA	1 cut(s)	592
BcoDI	GTCTC	3 cut(s)	401, 1400, 1562
BfaI	CTAG	4 cut(s)	174, 332, 543, 561
BfmI	CTRYAG	2 cut(s)	312, 830
BfuAI	ACCTGC	1 cut(s)	424
BfuI	GTATCC	2 cut(s)	231, 1852
BglII	AGATCT	1 cut(s)	181
BisI	GCNGC	3 cut(s)	830, 833, 1471
BlsI	GCNGC	3 cut(s)	831, 834, 1472
BmcAI	AGTACT	2 cut(s)	523, 1870
Bme1390I	CCNGG	4 cut(s)	24, 156, 921, 1053
Bme18I	GGWCC	5 cut(s)	237, 283, 720, 1609, 1630
BmeT110I	CYCGRG	2 cut(s)	207, 1498
BmgT120I	GGNCC	6 cut(s)	237, 283, 485, 720, 1609, 1630
BmiI	GGNNCC	5 cut(s)	6, 35, 722, 778, 1057
BmrFI	CCNGG	4 cut(s)	24, 156, 921, 1053
BmrI	ACTGGG	2 cut(s)	492, 718
BmsI	GCATC	7 cut(s)	433, 844, 940, 1078, 1378, 1651, 1800
BmuI	ACTGGG	2 cut(s)	492, 718
BpiI	GAAGAC	1 cut(s)	479
BplI	GAGNNNNNCTC	2 cut(s)	560, 592
BpmI	CTGGAG	2 cut(s)	206, 1035
BpuEI	CTTGAG	3 cut(s)	56, 947, 972
BsaBI	GATNNNNATC	1 cut(s)	1125
BsaJI	CCNNGG	6 cut(s)	143, 358, 1151, 1641, 1760, 1782
BsaWI	WCCGGW	1 cut(s)	275
BsaXI	ACNNNNNCTCC	4 cut(s)	835, 865, 1960, 1990
Bsc4I	CCNNNNNNNGG	5 cut(s)	264, 494, 773, 881, 1561
Bse1I	ACTGG	3 cut(s)	487, 724, 1622
Bse3DI	GCAATG	3 cut(s)	14, 639, 1311
Bse8I	GATNNNNATC	1 cut(s)	1125
BseBI	CCWGG	4 cut(s)	24, 156, 921, 1053
BseDI	CCNNGG	6 cut(s)	143, 358, 1151, 1641, 1760, 1782
BseGI	GGATG	4 cut(s)	111, 448, 668, 1204
BseJI	GATNNNNATC	1 cut(s)	1125
BseLI	CCNNNNNNNGG	5 cut(s)	264, 494, 773, 881, 1561
BseMI	GCAATG	3 cut(s)	14, 639, 1311
BseMII	CTCAG	4 cut(s)	984, 1226, 1356, 1557
BseNI	ACTGG	3 cut(s)	487, 724, 1622
BseRI	GAGGAG	1 cut(s)	1627
BseSI	GKGCMC	1 cut(s)	935
BseX3I	CGGCCG	1 cut(s)	88
BseXI	GCAGC	2 cut(s)	816, 844
BsgI	GTGCAG	1 cut(s)	405
Bsh1285I	CGRYCG	1 cut(s)	91
BshFI	GGCC	3 cut(s)	90, 257, 487
BsiEI	CGRYCG	1 cut(s)	91
BsiHKAI	GWGCWC	2 cut(s)	355, 611
BsiHKCI	CYCGRG	2 cut(s)	207, 1498
BsiSI	CCGG	2 cut(s)	258, 276
BslFI	GGGAC	1 cut(s)	161
BslI	CCNNNNNNNGG	5 cut(s)	264, 494, 773, 881, 1561
BsmAI	GTCTC	3 cut(s)	401, 1400, 1562
BsmBI	CGTCTC	1 cut(s)	401
BsmFI	GGGAC	1 cut(s)	161
BsnI	GGCC	3 cut(s)	90, 257, 487
BsoBI	CYCGRG	2 cut(s)	207, 1498
Bsp1286I	GDGCHC	3 cut(s)	355, 611, 935
Bsp19I	CCATGG	3 cut(s)	358, 1760, 1782
BspACI	CCGC	4 cut(s)	286, 613, 1019, 1470
BspANI	GGCC	3 cut(s)	90, 257, 487
BspCNI	CTCAG	4 cut(s)	983, 1227, 1357, 1558
BspHI	TCATGA	1 cut(s)	1117
BspLI	GGNNCC	5 cut(s)	6, 35, 722, 778, 1057
BspMAI	CTGCAG	1 cut(s)	834
BspMI	ACCTGC	1 cut(s)	424
BspPI	GGATC	3 cut(s)	238, 911, 1029
BspQI	GCTCTTC	3 cut(s)	343, 655, 1326
BsrDI	GCAATG	3 cut(s)	14, 639, 1311
BsrI	ACTGG	3 cut(s)	487, 724, 1622
BssECI	CCNNGG	6 cut(s)	143, 358, 1151, 1641, 1760, 1782
BssT1I	CCWWGG	5 cut(s)	143, 358, 1641, 1760, 1782
Bst2UI	CCWGG	4 cut(s)	24, 156, 921, 1053
Bst4CI	ACNGT	2 cut(s)	1603, 2014
Bst6I	CTCTTC	5 cut(s)	343, 655, 679, 1265, 1326
BstAPI	GCANNNNNTGC	1 cut(s)	1046
BstC8I	GCNNGC	2 cut(s)	431, 1318
BstDEI	CTNAG	7 cut(s)	252, 798, 970, 1235, 1365, 1566, 1677
BstDSI	CCRYGG	4 cut(s)	358, 1151, 1760, 1782
BstF5I	GGATG	4 cut(s)	111, 448, 668, 1204
BstHHI	GCGC	3 cut(s)	454, 979, 1666
BstMAI	GTCTC	3 cut(s)	401, 1400, 1562
BstMCI	CGRYCG	1 cut(s)	91
BstMWI	GCNNNNNNNGC	5 cut(s)	254, 838, 1046, 1055, 1810
BstNI	CCWGG	4 cut(s)	24, 156, 921, 1053
BstNSI	RCATGY	1 cut(s)	983
BstSCI	CCNGG	4 cut(s)	22, 154, 919, 1051
BstSFI	CTRYAG	2 cut(s)	312, 830
BstSLI	GKGCMC	1 cut(s)	935
BstV1I	GCAGC	2 cut(s)	816, 844
BstV2I	GAAGAC	1 cut(s)	479
BstX2I	RGATCY	2 cut(s)	181, 916
BstYI	RGATCY	2 cut(s)	181, 916
BstZI	CGGCCG	1 cut(s)	88
BsuI	GTATCC	2 cut(s)	231, 1852
BsuRI	GGCC	3 cut(s)	90, 257, 487
BtgI	CCRYGG	4 cut(s)	358, 1151, 1760, 1782
BtsCI	GGATG	4 cut(s)	111, 448, 668, 1204
BtsI	GCAGTG	2 cut(s)	1799, 1884
BtsIMutI	CAGTG	3 cut(s)	1799, 1884, 2010
BveI	ACCTGC	1 cut(s)	424
Cac8I	GCNNGC	2 cut(s)	431, 1318
CaiI	CAGNNNCTG	2 cut(s)	920, 947
CciI	TCATGA	1 cut(s)	1117
CfoI	GCGC	3 cut(s)	454, 979, 1666
Cfr13I	GGNCC	6 cut(s)	237, 283, 485, 720, 1609, 1630
CseI	GACGC	1 cut(s)	749
Csp6I	GTAC	4 cut(s)	522, 939, 1869, 2031
CspCI	CAANNNNNGTGG	2 cut(s)	1873, 1908
CviQI	GTAC	4 cut(s)	522, 939, 1869, 2031
DdeI	CTNAG	7 cut(s)	252, 798, 970, 1235, 1365, 1566, 1677
EaeI	YGGCCR	1 cut(s)	88
EagI	CGGCCG	1 cut(s)	88
Eam1104I	CTCTTC	5 cut(s)	343, 655, 679, 1265, 1326
EarI	CTCTTC	5 cut(s)	343, 655, 679, 1265, 1326
Ecl136II	GAGCTC	1 cut(s)	609
EclXI	CGGCCG	1 cut(s)	88
Eco130I	CCWWGG	5 cut(s)	143, 358, 1641, 1760, 1782
Eco24I	GRGCYC	1 cut(s)	611
Eco47I	GGWCC	5 cut(s)	237, 283, 720, 1609, 1630
Eco52I	CGGCCG	1 cut(s)	88
Eco53kI	GAGCTC	1 cut(s)	609
Eco57I	CTGAAG	5 cut(s)	138, 184, 1578, 1849, 2009
Eco88I	CYCGRG	2 cut(s)	207, 1498
EcoICRI	GAGCTC	1 cut(s)	609
EcoRI	GAATTC	2 cut(s)	1391, 1715
EcoRII	CCWGG	4 cut(s)	22, 154, 919, 1051
EcoT14I	CCWWGG	5 cut(s)	143, 358, 1641, 1760, 1782
EcoT22I	ATGCAT	2 cut(s)	387, 448
EcoT38I	GRGCYC	1 cut(s)	611
ErhI	CCWWGG	5 cut(s)	143, 358, 1641, 1760, 1782
Esp3I	CGTCTC	1 cut(s)	401
FalI	AAGNNNNNCTT	2 cut(s)	1931, 1963
FaqI	GGGAC	1 cut(s)	161
FauI	CCCGC	1 cut(s)	620
FauNDI	CATATG	1 cut(s)	448
FbaI	TGATCA	1 cut(s)	592
Fnu4HI	GCNGC	3 cut(s)	830, 833, 1471
FokI	GGATG	4 cut(s)	98, 455, 655, 1211
FriOI	GRGCYC	1 cut(s)	611
Fsp4HI	GCNGC	3 cut(s)	830, 833, 1471
FspBI	CTAG	4 cut(s)	174, 332, 543, 561
FspI	TGCGCA	2 cut(s)	978, 1665
GlaI	GCGC	3 cut(s)	453, 978, 1665
GluI	GCNGC	3 cut(s)	830, 833, 1471
GsuI	CTGGAG	2 cut(s)	206, 1035
HaeIII	GGCC	3 cut(s)	90, 257, 487
HapII	CCGG	2 cut(s)	258, 276
HgaI	GACGC	1 cut(s)	749
HhaI	GCGC	3 cut(s)	454, 979, 1666
Hin6I	GCGC	3 cut(s)	452, 977, 1664
HinP1I	GCGC	3 cut(s)	452, 977, 1664
HincII	GTYRAC	1 cut(s)	1081
HindII	GTYRAC	1 cut(s)	1081
HindIII	AAGCTT	1 cut(s)	1318
HinfI	GANTC	5 cut(s)	581, 1126, 1231, 1428, 1756
HpaII	CCGG	2 cut(s)	258, 276
HphI	GGTGA	2 cut(s)	602, 1963
Hpy166II	GTNNAC	5 cut(s)	295, 888, 1081, 1144, 1633
Hpy188I	TCNGA	9 cut(s)	580, 627, 916, 1104, 1236, 1255, 1326, 1597, 1989
Hpy8I	GTNNAC	5 cut(s)	295, 888, 1081, 1144, 1633
Hpy99I	CGWCG	1 cut(s)	404
HpyAV	CCTTC	6 cut(s)	262, 730, 1503, 1602, 1873, 1895
HpyCH4III	ACNGT	2 cut(s)	1603, 2014
HpyCH4IV	ACGT	1 cut(s)	1834
HpyF10VI	GCNNNNNNNGC	5 cut(s)	254, 838, 1046, 1055, 1810
HpyF3I	CTNAG	7 cut(s)	252, 798, 970, 1235, 1365, 1566, 1677
HpySE526I	ACGT	1 cut(s)	1834
HspAI	GCGC	3 cut(s)	452, 977, 1664
Ksp22I	TGATCA	1 cut(s)	592
LguI	GCTCTTC	3 cut(s)	343, 655, 1326
LmnI	GCTCC	5 cut(s)	10, 614, 776, 1054, 1055
Lsp1109I	GCAGC	2 cut(s)	816, 844
LweI	GCATC	7 cut(s)	433, 844, 940, 1078, 1378, 1651, 1800
MaeI	CTAG	4 cut(s)	174, 332, 543, 561
MaeII	ACGT	1 cut(s)	1834
MaeIII	GTNAC	4 cut(s)	545, 1741, 1795, 1909
MfeI	CAATTG	1 cut(s)	1176
MflI	RGATCY	2 cut(s)	181, 916
MhlI	GDGCHC	3 cut(s)	355, 611, 935
Mph1103I	ATGCAT	2 cut(s)	387, 448
MroXI	GAANNNNTTC	1 cut(s)	1274
MseI	TTAA	6 cut(s)	468, 747, 1386, 1530, 1605, 1686
MslI	CAYNNNNRTG	1 cut(s)	817
MspI	CCGG	2 cut(s)	258, 276
MspR9I	CCNGG	4 cut(s)	24, 156, 921, 1053
MunI	CAATTG	1 cut(s)	1176
MvaI	CCWGG	4 cut(s)	24, 156, 921, 1053
MwoI	GCNNNNNNNGC	5 cut(s)	254, 838, 1046, 1055, 1810
NcoI	CCATGG	3 cut(s)	358, 1760, 1782
NdeI	CATATG	1 cut(s)	448
NlaIV	GGNNCC	5 cut(s)	6, 35, 722, 778, 1057
NmuCI	GTSAC	1 cut(s)	545
NsbI	TGCGCA	2 cut(s)	978, 1665
NsiI	ATGCAT	2 cut(s)	387, 448
NspI	RCATGY	1 cut(s)	983
PaeR7I	CTCGAG	1 cut(s)	207
PagI	TCATGA	1 cut(s)	1117
PciSI	GCTCTTC	3 cut(s)	343, 655, 1326
PcsI	WCGNNNNNNNCGW	1 cut(s)	1496
PdmI	GAANNNNTTC	1 cut(s)	1274
PfeI	GAWTC	5 cut(s)	581, 1126, 1231, 1428, 1756
PfoI	TCCNGGA	2 cut(s)	919, 1051
PkrI	GCNGC	3 cut(s)	831, 834, 1472
Psp124BI	GAGCTC	1 cut(s)	611
Psp6I	CCWGG	4 cut(s)	22, 154, 919, 1051
PspGI	CCWGG	4 cut(s)	22, 154, 919, 1051
PspN4I	GGNNCC	5 cut(s)	6, 35, 722, 778, 1057
PspPI	GGNCC	6 cut(s)	237, 283, 485, 720, 1609, 1630
PstI	CTGCAG	1 cut(s)	834
PstNI	CAGNNNCTG	2 cut(s)	920, 947
PsuI	RGATCY	2 cut(s)	181, 916
RsaI	GTAC	4 cut(s)	523, 940, 1870, 2032
RsaNI	GTAC	4 cut(s)	522, 939, 1869, 2031
RseI	CAYNNNNRTG	1 cut(s)	817
SacI	GAGCTC	1 cut(s)	611
SapI	GCTCTTC	3 cut(s)	343, 655, 1326
SaqAI	TTAA	6 cut(s)	468, 747, 1386, 1530, 1605, 1686
SatI	GCNGC	3 cut(s)	830, 833, 1471
Sau96I	GGNCC	6 cut(s)	237, 283, 485, 720, 1609, 1630
ScaI	AGTACT	2 cut(s)	523, 1870
ScrFI	CCNGG	4 cut(s)	24, 156, 921, 1053
SduI	GDGCHC	3 cut(s)	355, 611, 935
SfaNI	GCATC	7 cut(s)	433, 844, 940, 1078, 1378, 1651, 1800
SfcI	CTRYAG	2 cut(s)	312, 830
Sfr274I	CTCGAG	1 cut(s)	207
SinI	GGWCC	5 cut(s)	237, 283, 720, 1609, 1630
SlaI	CTCGAG	1 cut(s)	207
SmiMI	CAYNNNNRTG	1 cut(s)	817
SmlI	CTYRAG	4 cut(s)	71, 207, 926, 987
SmoI	CTYRAG	4 cut(s)	71, 207, 926, 987
SsiI	CCGC	4 cut(s)	286, 613, 1019, 1470
SspI	AATATT	1 cut(s)	911
SspMI	CTAG	4 cut(s)	174, 332, 543, 561
SstI	GAGCTC	1 cut(s)	611
StyD4I	CCNGG	4 cut(s)	22, 154, 919, 1051
StyI	CCWWGG	5 cut(s)	143, 358, 1641, 1760, 1782
TaaI	ACNGT	2 cut(s)	1603, 2014
TaiI	ACGT	1 cut(s)	1837
TaqI	TCGA	8 cut(s)	99, 208, 214, 233, 399, 734, 1305, 1647
TatI	WGTACW	2 cut(s)	521, 1868
TauI	GCSGC	1 cut(s)	1473
TfiI	GAWTC	5 cut(s)	581, 1126, 1231, 1428, 1756
Tru1I	TTAA	6 cut(s)	468, 747, 1386, 1530, 1605, 1686
Tru9I	TTAA	6 cut(s)	468, 747, 1386, 1530, 1605, 1686
TscAI	CASTG	3 cut(s)	1806, 1891, 2017
TseFI	GTSAC	1 cut(s)	545
TseI	GCWGC	2 cut(s)	829, 832
Tsp45I	GTSAC	1 cut(s)	545
TspDTI	ATGAA	8 cut(s)	335, 402, 650, 653, 666, 1139, 1152, 1420
TspGWI	ACGGA	2 cut(s)	843, 1241
TspRI	CASTG	3 cut(s)	1806, 1891, 2017
VpaK11BI	GGWCC	5 cut(s)	237, 283, 720, 1609, 1630
XapI	RAATTY	5 cut(s)	963, 1159, 1391, 1521, 1715
XceI	RCATGY	1 cut(s)	983
XhoI	CTCGAG	1 cut(s)	207
XmnI	GAANNNNTTC	1 cut(s)	1274
XspI	CTAG	4 cut(s)	174, 332, 543, 561
ZrmI	AGTACT	2 cut(s)	523, 1870
Zsp2I	ATGCAT	2 cut(s)	387, 448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.