RchiOBHm_Chr7g0204941

Zeaxanthin epoxidase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
22601788 .. 22604057
2270 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1356 bp
ATGGGTGTAGTCTCTTTTTCCCTAGTGCTTCACAGCTCACTGGTGTCACCATACCATTCTCAAACTAGAAATCCTCTTGGCCAATCCAATTGGTTTCGAGCTCCAACCACAACCAGAACAAAACCCACTTCTTTATCAATCATAAGAGCTCAATCTGGTGCCCGTAAGGAAGAGATTGTCATAGTTGGCGCCGGAATCGCCGGCCTTGCCACTGCTCTGTCTCTTCACAGGCTTGGAATTGGATCAGTGGTGCTAGAGCAAGCAGAGTCGCTTCGAACCAGTGGAACTTCACTCACCCTCTTCAAAAATGGCTGGAGGGTTTTGGATGCAATTGGAGTTGGAGATGATCTCAGAACCCAGTTTCTTGAAATTCAAGGGATGGTAGTAACAACAGCCAAGGGAAATGAGCTACGCTCCTTCAAGTTCAAAGAGGAAGATGAAAGCCAAGAGGTGCGTGCCGTGGAAAGGAGAATACTACTGGAGACTCTTGCCAATCAACTACCCCAAGGGGCGGTTCGTTTCTCTTCAAAGCTTGCAAAGATTGAGAAGAGTGAAGATGGAGACACTTCGCTGCAACTTGTGGATGATACTCAGCTATCTGCTAAGATTGTAATTGGCTGTGATGGAATTCGGTCTCCTATAGCTAAGTGGATGGGGTTCCCTGAGCCTAAGTATGCAGGGCATTGTGGTCTTCGAGGCCTTGCATTCTTTCCCGGTGGCCATAAATTTGAACCAAAACTGAATCAAATCTATGGAAGAGGGCAGCGTGCTGGAATTGTTCCTATTTCTCCTACAAAAGTCTACTGGTTTGTCTGCTTCAACAGGCCATCTCCAGGTCCAAAAATAAATGACCCAGCTGTGCTAAAGAAGCTAGCTAGAGAACTGGTAACAAACTGGCCTTCAGACCTGTTGGACATTATAGACCATACCCCGGATGACACAATTAGTCGAACACCACTAGTAGACCGGTGGCTGTGGCCATCCATCAGCCCTCCGGCTTCAGCAGGAAGAGTTGTGCTGGTTGGAGATGCTTGGCATCCAATGACTCCCAATCTTGGACAAGGCGCTTGTTGTGCTTTGGAAGATTCAGTAATTTTGGCACGAAAGCTTGCAGCAGCGATTGACTCAGGACCAGCAGCCATTGAAGATGCTCTCAGCTCATATGGAAATGAAAGATGGCCTCGAATTTTTCCGCTAACCATACGTGCAAATCTCATAGGGTCACTACTGCAGTGGGAGAATCCTGTTGTGTGTTCTGTCCGGAACAATGTCATTATCCCAAAGCTTGTTAAGCTAGGACCAATGCTGGAACACACAAATTTTGACTGCCAACCTCTCCAGAATCAAGTTGTGTAA

Protein Analysis

451

Amino Acids

49.3

Weight (kDa)

8.9

Isoelectric Point (pI)

38.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 58 - 395 2.6e-28 FAD binding domain
Lycopene_cycl PF05834 59 - 212 1.3e-07 Lycopene cyclase protein
DAO PF01266 59 - 107 7.7e-07 FAD dependent oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012148)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 158, 188
AccI GTMKAC 2 cut(s) 801, 963
AccIII TCCGGA 1 cut(s) 1260
AciI CCGC 2 cut(s) 512, 1193
AclWI GGATC 1 cut(s) 250
AcoI YGGCCR 3 cut(s) 79, 718, 977
AcsI RAATTY 5 cut(s) 369, 627, 725, 1185, 1318
AcuI CTGAAG 2 cut(s) 885, 984
AcyI GRCGYC 1 cut(s) 189
AfiI CCNNNNNNNGG 5 cut(s) 465, 511, 833, 931, 1055
AgeI ACCGGT 1 cut(s) 966
AgsI TTSAA 9 cut(s) 304, 368, 374, 421, 427, 528, 731, 820, 1145
AhlI ACTAGT 1 cut(s) 958
AjnI CCWGG 1 cut(s) 832
AjuI GAANNNNNNNTTGG 2 cut(s) 498, 530
Alw21I GWGCWC 2 cut(s) 103, 151
Alw26I GTCTC 5 cut(s) 16, 225, 476, 555, 639
AlwI GGATC 1 cut(s) 250
Aor13HI TCCGGA 1 cut(s) 1260
AoxI GGCC 8 cut(s) 79, 202, 697, 718, 824, 896, 977, 1178
ApeKI GCWGC 5 cut(s) 571, 763, 1112, 1115, 1136
ApoI RAATTY 5 cut(s) 369, 627, 725, 1185, 1318
AsiGI ACCGGT 1 cut(s) 966
AspLEI GCGC 2 cut(s) 191, 1067
AspS9I GGNCC 3 cut(s) 836, 1130, 1298
AsuC2I CCSGG 2 cut(s) 714, 932
AsuHPI GGTGA 2 cut(s) 39, 286
AsuII TTCGAA 1 cut(s) 274
AsuNHI GCTAGC 1 cut(s) 871
AvaII GGWCC 3 cut(s) 836, 1130, 1298
BaeGI GKGCMC 1 cut(s) 163
BalI TGGCCA 3 cut(s) 81, 720, 979
BanI GGYRCC 2 cut(s) 158, 188
BanII GRGCYC 2 cut(s) 103, 151
BbsI GAAGAC 1 cut(s) 683
Bbv12I GWGCWC 2 cut(s) 103, 151
BbvI GCAGC 5 cut(s) 558, 775, 1124, 1127, 1148
BccI CCATC 8 cut(s) 373, 551, 617, 646, 835, 988, 992, 1170
BceAI ACGGC 1 cut(s) 443
BciT130I CCWGG 1 cut(s) 834
BcnI CCSGG 2 cut(s) 714, 932
BcoDI GTCTC 5 cut(s) 16, 225, 476, 555, 639
BcuI ACTAGT 1 cut(s) 958
BfaI CTAG 7 cut(s) 23, 66, 254, 872, 876, 959, 1295
BfmI CTRYAG 2 cut(s) 639, 1229
BfoI RGCGCY 2 cut(s) 192, 1068
BisI GCNGC 5 cut(s) 572, 764, 1113, 1116, 1137
BlsI GCNGC 5 cut(s) 573, 765, 1114, 1117, 1138
Bme1390I CCNGG 3 cut(s) 714, 834, 932
Bme18I GGWCC 3 cut(s) 836, 1130, 1298
BmgT120I GGNCC 3 cut(s) 836, 1130, 1298
BmiI GGNNCC 3 cut(s) 160, 190, 659
BmrFI CCNGG 3 cut(s) 714, 834, 932
BmrI ACTGGG 1 cut(s) 352
BmsI GCATC 4 cut(s) 316, 1018, 1045, 1138
BmtI GCTAGC 1 cut(s) 875
BmuI ACTGGG 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 683
BplI GAGNNNNNCTC 4 cut(s) 333, 365, 398, 430
BpmI CTGGAG 4 cut(s) 334, 500, 816, 1322
Bpu10I CCTNAGC 1 cut(s) 663
Bpu14I TTCGAA 1 cut(s) 274
BpuMI CCSGG 2 cut(s) 714, 932
BsaAI YACGTR 1 cut(s) 1205
BsaHI GRCGYC 1 cut(s) 189
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 4 cut(s) 396, 459, 505, 930
BsaWI WCCGGW 2 cut(s) 966, 1260
Bsc4I CCNNNNNNNGG 5 cut(s) 465, 511, 833, 931, 1055
Bse118I RCCGGY 2 cut(s) 200, 966
Bse1I ACTGG 7 cut(s) 45, 279, 358, 483, 809, 888, 899
BseAI TCCGGA 1 cut(s) 1260
BseBI CCWGG 1 cut(s) 834
BseDI CCNNGG 4 cut(s) 396, 459, 505, 930
BseGI GGATG 7 cut(s) 331, 384, 589, 657, 940, 980, 1036
BseLI CCNNNNNNNGG 5 cut(s) 465, 511, 833, 931, 1055
BseMII CTCAG 5 cut(s) 364, 605, 654, 1140, 1168
BseNI ACTGG 7 cut(s) 45, 279, 358, 483, 809, 888, 899
BseSI GKGCMC 1 cut(s) 163
BseXI GCAGC 5 cut(s) 558, 775, 1124, 1127, 1148
BseYI CCCAGC 1 cut(s) 853
BshFI GGCC 8 cut(s) 81, 204, 699, 720, 826, 898, 979, 1180
BshNI GGYRCC 2 cut(s) 158, 188
BshTI ACCGGT 1 cut(s) 966
BsiHKAI GWGCWC 2 cut(s) 103, 151
BsiSI CCGG 7 cut(s) 192, 201, 714, 932, 967, 995, 1261
BslI CCNNNNNNNGG 5 cut(s) 465, 511, 833, 931, 1055
BsmAI GTCTC 5 cut(s) 16, 225, 476, 555, 639
BsmI GAATGC 1 cut(s) 704
BsnI GGCC 8 cut(s) 81, 204, 699, 720, 826, 898, 979, 1180
Bso31I GGTCTC 1 cut(s) 639
Bsp119I TTCGAA 1 cut(s) 274
Bsp1286I GDGCHC 3 cut(s) 103, 151, 163
Bsp13I TCCGGA 1 cut(s) 1260
Bsp143I GATC 2 cut(s) 242, 346
BspACI CCGC 2 cut(s) 512, 1193
BspANI GGCC 8 cut(s) 81, 204, 699, 720, 826, 898, 979, 1180
BspCNI CTCAG 5 cut(s) 363, 604, 655, 1139, 1167
BspEI TCCGGA 1 cut(s) 1260
BspLI GGNNCC 3 cut(s) 160, 190, 659
BspMAI CTGCAG 1 cut(s) 1233
BspOI GCTAGC 1 cut(s) 875
BspPI GGATC 1 cut(s) 250
BspT104I TTCGAA 1 cut(s) 274
BspT107I GGYRCC 2 cut(s) 158, 188
BspTNI GGTCTC 1 cut(s) 639
BsrFI RCCGGY 2 cut(s) 200, 966
BsrI ACTGG 7 cut(s) 45, 279, 358, 483, 809, 888, 899
BssAI RCCGGY 2 cut(s) 200, 966
BssECI CCNNGG 4 cut(s) 396, 459, 505, 930
BssMI GATC 2 cut(s) 242, 346
BssNI GRCGYC 1 cut(s) 189
BssT1I CCWWGG 2 cut(s) 396, 505
Bst2UI CCWGG 1 cut(s) 834
Bst6I CTCTTC 7 cut(s) 165, 228, 305, 529, 542, 751, 1003
BstACI GRCGYC 1 cut(s) 189
BstBAI YACGTR 1 cut(s) 1205
BstBI TTCGAA 1 cut(s) 274
BstC8I GCNNGC 7 cut(s) 202, 261, 456, 534, 768, 873, 1110
BstDEI CTNAG 8 cut(s) 350, 591, 603, 645, 663, 669, 1126, 1154
BstDSI CCRYGG 1 cut(s) 459
BstF5I GGATG 7 cut(s) 331, 384, 589, 657, 940, 980, 1036
BstH2I RGCGCY 2 cut(s) 192, 1068
BstHHI GCGC 2 cut(s) 191, 1067
BstKTI GATC 2 cut(s) 245, 349
BstMAI GTCTC 5 cut(s) 16, 225, 476, 555, 639
BstMBI GATC 2 cut(s) 242, 346
BstMWI GCNNNNNNNGC 5 cut(s) 197, 206, 868, 1073, 1291
BstNI CCWGG 1 cut(s) 834
BstSCI CCNGG 3 cut(s) 712, 832, 930
BstSFI CTRYAG 2 cut(s) 639, 1229
BstSLI GKGCMC 1 cut(s) 163
BstV1I GCAGC 5 cut(s) 558, 775, 1124, 1127, 1148
BstV2I GAAGAC 1 cut(s) 683
BsuRI GGCC 8 cut(s) 81, 204, 699, 720, 826, 898, 979, 1180
BtgI CCRYGG 1 cut(s) 459
BtsCI GGATG 7 cut(s) 331, 384, 589, 657, 940, 980, 1036
BtsI GCAGTG 2 cut(s) 210, 1238
BtsIMutI CAGTG 5 cut(s) 38, 210, 252, 286, 1238
Cac8I GCNNGC 7 cut(s) 202, 261, 456, 534, 768, 873, 1110
CfoI GCGC 2 cut(s) 191, 1067
Cfr10I RCCGGY 2 cut(s) 200, 966
Cfr13I GGNCC 3 cut(s) 836, 1130, 1298
CspAI ACCGGT 1 cut(s) 966
DdeI CTNAG 8 cut(s) 350, 591, 603, 645, 663, 669, 1126, 1154
DinI GGCGCC 1 cut(s) 190
DpnI GATC 2 cut(s) 244, 348
DpnII GATC 2 cut(s) 242, 346
EaeI YGGCCR 3 cut(s) 79, 718, 977
Eam1104I CTCTTC 7 cut(s) 165, 228, 305, 529, 542, 751, 1003
EarI CTCTTC 7 cut(s) 165, 228, 305, 529, 542, 751, 1003
Ecl136II GAGCTC 2 cut(s) 101, 149
Eco130I CCWWGG 2 cut(s) 396, 505
Eco147I AGGCCT 1 cut(s) 699
Eco24I GRGCYC 2 cut(s) 103, 151
Eco31I GGTCTC 1 cut(s) 639
Eco47I GGWCC 3 cut(s) 836, 1130, 1298
Eco53kI GAGCTC 2 cut(s) 101, 149
Eco57I CTGAAG 2 cut(s) 885, 984
EcoICRI GAGCTC 2 cut(s) 101, 149
EcoRI GAATTC 1 cut(s) 627
EcoRII CCWGG 1 cut(s) 832
EcoT14I CCWWGG 2 cut(s) 396, 505
EcoT38I GRGCYC 2 cut(s) 103, 151
EgeI GGCGCC 1 cut(s) 190
EheI GGCGCC 1 cut(s) 190
ErhI CCWWGG 2 cut(s) 396, 505
FauNDI CATATG 1 cut(s) 1162
FblI GTMKAC 2 cut(s) 801, 963
Fnu4HI GCNGC 5 cut(s) 572, 764, 1113, 1116, 1137
FokI GGATG 7 cut(s) 338, 391, 596, 664, 947, 967, 1023
FriOI GRGCYC 2 cut(s) 103, 151
Fsp4HI GCNGC 5 cut(s) 572, 764, 1113, 1116, 1137
FspBI CTAG 7 cut(s) 23, 66, 254, 872, 876, 959, 1295
GlaI GCGC 2 cut(s) 190, 1066
GluI GCNGC 5 cut(s) 572, 764, 1113, 1116, 1137
GsaI CCCAGC 1 cut(s) 857
GsuI CTGGAG 4 cut(s) 334, 500, 816, 1322
HaeII RGCGCY 2 cut(s) 192, 1068
HaeIII GGCC 8 cut(s) 81, 204, 699, 720, 826, 898, 979, 1180
HapII CCGG 7 cut(s) 192, 201, 714, 932, 967, 995, 1261
HhaI GCGC 2 cut(s) 191, 1067
Hin1I GRCGYC 1 cut(s) 189
Hin6I GCGC 2 cut(s) 189, 1065
HinP1I GCGC 2 cut(s) 189, 1065
HindIII AAGCTT 3 cut(s) 530, 1106, 1283
HinfI GANTC 9 cut(s) 195, 266, 484, 742, 1045, 1085, 1124, 1240, 1342
HpaII CCGG 7 cut(s) 192, 201, 714, 932, 967, 995, 1261
HphI GGTGA 2 cut(s) 39, 286
Hpy166II GTNNAC 2 cut(s) 802, 964
Hpy188I TCNGA 2 cut(s) 353, 904
Hpy188III TCNNGA 4 cut(s) 365, 1128, 1261, 1339
Hpy8I GTNNAC 2 cut(s) 802, 964
HpyAV CCTTC 2 cut(s) 427, 909
HpyCH4IV ACGT 1 cut(s) 1204
HpyCH4V TGCA 8 cut(s) 329, 536, 574, 677, 704, 1112, 1208, 1231
HpyF10VI GCNNNNNNNGC 5 cut(s) 197, 206, 868, 1073, 1291
HpyF3I CTNAG 8 cut(s) 350, 591, 603, 645, 663, 669, 1126, 1154
HpySE526I ACGT 1 cut(s) 1204
Hsp92I GRCGYC 1 cut(s) 189
HspAI GCGC 2 cut(s) 189, 1065
KasI GGCGCC 1 cut(s) 188
Kpn2I TCCGGA 1 cut(s) 1260
KroI GCCGGC 1 cut(s) 200
KroNI GCCGGC 1 cut(s) 202
Kzo9I GATC 2 cut(s) 242, 346
LmnI GCTCC 2 cut(s) 106, 419
Lsp1109I GCAGC 5 cut(s) 558, 775, 1124, 1127, 1148
LweI GCATC 4 cut(s) 316, 1018, 1045, 1138
MaeI CTAG 7 cut(s) 23, 66, 254, 872, 876, 959, 1295
MaeII ACGT 1 cut(s) 1204
MaeIII GTNAC 4 cut(s) 45, 385, 886, 1221
MalI GATC 2 cut(s) 244, 348
MboI GATC 2 cut(s) 242, 346
MfeI CAATTG 2 cut(s) 88, 330
MhlI GDGCHC 3 cut(s) 103, 151, 163
MlsI TGGCCA 3 cut(s) 81, 720, 979
MluNI TGGCCA 3 cut(s) 81, 720, 979
Mly113I GGCGCC 1 cut(s) 189
MlyI GAGTC 4 cut(s) 275, 478, 1039, 1118
MmeI TCCRAC 4 cut(s) 128, 319, 891, 1003
Mox20I TGGCCA 3 cut(s) 81, 720, 979
MroI TCCGGA 1 cut(s) 1260
MroNI GCCGGC 1 cut(s) 200
MscI TGGCCA 3 cut(s) 81, 720, 979
MseI TTAA 1 cut(s) 1290
Msp20I TGGCCA 3 cut(s) 81, 720, 979
MspA1I CMGCKG 1 cut(s) 857
MspI CCGG 7 cut(s) 192, 201, 714, 932, 967, 995, 1261
MspR9I CCNGG 3 cut(s) 714, 834, 932
MunI CAATTG 2 cut(s) 88, 330
Mva1269I GAATGC 1 cut(s) 704
MvaI CCWGG 1 cut(s) 834
MwoI GCNNNNNNNGC 5 cut(s) 197, 206, 868, 1073, 1291
NaeI GCCGGC 1 cut(s) 202
NarI GGCGCC 1 cut(s) 189
NciI CCSGG 2 cut(s) 714, 932
NdeI CATATG 1 cut(s) 1162
NdeII GATC 2 cut(s) 242, 346
NgoMIV GCCGGC 1 cut(s) 200
NheI GCTAGC 1 cut(s) 871
NlaIV GGNNCC 3 cut(s) 160, 190, 659
NmuCI GTSAC 2 cut(s) 45, 1221
NspV TTCGAA 1 cut(s) 274
PceI AGGCCT 1 cut(s) 699
PctI GAATGC 1 cut(s) 704
PdiI GCCGGC 1 cut(s) 202
PfeI GAWTC 5 cut(s) 195, 742, 1085, 1240, 1342
PinAI ACCGGT 1 cut(s) 966
PkrI GCNGC 5 cut(s) 573, 765, 1114, 1117, 1138
PleI GAGTC 4 cut(s) 274, 478, 1039, 1118
PluTI GGCGCC 1 cut(s) 192
PpsI GAGTC 4 cut(s) 274, 478, 1039, 1118
Ppu21I YACGTR 1 cut(s) 1205
Psp124BI GAGCTC 2 cut(s) 103, 151
Psp6I CCWGG 1 cut(s) 832
PspFI CCCAGC 1 cut(s) 853
PspGI CCWGG 1 cut(s) 832
PspN4I GGNNCC 3 cut(s) 160, 190, 659
PspPI GGNCC 3 cut(s) 836, 1130, 1298
PstI CTGCAG 1 cut(s) 1233
PvuII CAGCTG 1 cut(s) 857
SacI GAGCTC 2 cut(s) 103, 151
SaqAI TTAA 1 cut(s) 1290
SatI GCNGC 5 cut(s) 572, 764, 1113, 1116, 1137
Sau3AI GATC 2 cut(s) 242, 346
Sau96I GGNCC 3 cut(s) 836, 1130, 1298
SchI GAGTC 4 cut(s) 275, 478, 1039, 1118
ScrFI CCNGG 3 cut(s) 714, 834, 932
SduI GDGCHC 3 cut(s) 103, 151, 163
SfaNI GCATC 4 cut(s) 316, 1018, 1045, 1138
SfcI CTRYAG 2 cut(s) 639, 1229
SfoI GGCGCC 1 cut(s) 190
SfuI TTCGAA 1 cut(s) 274
SinI GGWCC 3 cut(s) 836, 1130, 1298
SpeI ACTAGT 1 cut(s) 958
SseBI AGGCCT 1 cut(s) 699
SsiI CCGC 2 cut(s) 512, 1193
SspDI GGCGCC 1 cut(s) 188
SspMI CTAG 7 cut(s) 23, 66, 254, 872, 876, 959, 1295
SstI GAGCTC 2 cut(s) 103, 151
StuI AGGCCT 1 cut(s) 699
StyD4I CCNGG 3 cut(s) 712, 832, 930
StyI CCWWGG 2 cut(s) 396, 505
TaiI ACGT 1 cut(s) 1207
TaqI TCGA 5 cut(s) 97, 274, 694, 949, 1183
TaqII GACCGA 1 cut(s) 621
TfiI GAWTC 5 cut(s) 195, 742, 1085, 1240, 1342
Tru1I TTAA 1 cut(s) 1290
Tru9I TTAA 1 cut(s) 1290
TscAI CASTG 5 cut(s) 45, 217, 252, 286, 1238
TseFI GTSAC 2 cut(s) 45, 1221
TseI GCWGC 5 cut(s) 571, 763, 1112, 1115, 1136
Tsp45I GTSAC 2 cut(s) 45, 1221
TspDTI ATGAA 2 cut(s) 453, 1185
TspRI CASTG 5 cut(s) 45, 217, 252, 286, 1238
VpaK11BI GGWCC 3 cut(s) 836, 1130, 1298
XapI RAATTY 5 cut(s) 369, 627, 725, 1185, 1318
XmiI GTMKAC 2 cut(s) 801, 963
XspI CTAG 7 cut(s) 23, 66, 254, 872, 876, 959, 1295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.