No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52070 AT3G52070 |
| fragaria_vesca | FvH4_5g32100 |
| malus_domestica | MD02G1308200.v1.1 |
| prunus_persica | Prupe.2G017200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0228141 |
| rosa_laevigata | RLG00000001585 |
| rosa_multiflora | Rmu_sc0012031.1_g000014 Rmu_sc0021525.1_g000002 |
| rosa_rugosa | Rorug07G0245900 |
| rosa_samantha | Rh7AG400100 Rh7BG381400 Rh7CG418300 Rh7DG396200 |
| rosa_wichuraiana | Rw0G005100 Rw0G011070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 298 |
| AcoI | YGGCCR | 1 cut(s) | 223 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 28 |
| AgsI | TTSAA | 3 cut(s) | 49, 167, 337 |
| AluBI | AGCT | 3 cut(s) | 186, 393, 430 |
| AluI | AGCT | 3 cut(s) | 186, 393, 430 |
| AoxI | GGCC | 1 cut(s) | 223 |
| ApeKI | GCWGC | 1 cut(s) | 186 |
| AsuHPI | GGTGA | 1 cut(s) | 377 |
| BanII | GRGCYC | 1 cut(s) | 353 |
| BbvI | GCAGC | 1 cut(s) | 173 |
| BceAI | ACGGC | 1 cut(s) | 210 |
| BfaI | CTAG | 1 cut(s) | 213 |
| BfmI | CTRYAG | 1 cut(s) | 234 |
| BglII | AGATCT | 1 cut(s) | 15 |
| BisI | GCNGC | 1 cut(s) | 187 |
| BlsI | GCNGC | 1 cut(s) | 188 |
| BpuEI | CTTGAG | 1 cut(s) | 367 |
| BsaJI | CCNNGG | 3 cut(s) | 27, 104, 220 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 32 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 28 |
| Bse1I | ACTGG | 1 cut(s) | 374 |
| BseDI | CCNNGG | 3 cut(s) | 27, 104, 220 |
| BseGI | GGATG | 1 cut(s) | 455 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseNI | ACTGG | 1 cut(s) | 374 |
| BseRI | GAGGAG | 1 cut(s) | 47 |
| BseXI | GCAGC | 1 cut(s) | 173 |
| BshFI | GGCC | 1 cut(s) | 225 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BsnI | GGCC | 1 cut(s) | 225 |
| Bsp1286I | GDGCHC | 1 cut(s) | 353 |
| Bsp143I | GATC | 1 cut(s) | 15 |
| Bsp19I | CCATGG | 3 cut(s) | 27, 104, 220 |
| BspACI | CCGC | 1 cut(s) | 298 |
| BspANI | GGCC | 1 cut(s) | 225 |
| BsrI | ACTGG | 1 cut(s) | 374 |
| BssECI | CCNNGG | 3 cut(s) | 27, 104, 220 |
| BssMI | GATC | 1 cut(s) | 15 |
| BssT1I | CCWWGG | 3 cut(s) | 27, 104, 220 |
| Bst4CI | ACNGT | 3 cut(s) | 152, 288, 446 |
| BstDSI | CCRYGG | 3 cut(s) | 27, 104, 220 |
| BstF5I | GGATG | 1 cut(s) | 455 |
| BstKTI | GATC | 1 cut(s) | 18 |
| BstMBI | GATC | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 446 |
| BstSFI | CTRYAG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 1 cut(s) | 173 |
| BstX2I | RGATCY | 1 cut(s) | 15 |
| BstYI | RGATCY | 1 cut(s) | 15 |
| BsuRI | GGCC | 1 cut(s) | 225 |
| BtgI | CCRYGG | 3 cut(s) | 27, 104, 220 |
| BtsCI | GGATG | 1 cut(s) | 455 |
| CviAII | CATG | 4 cut(s) | 28, 105, 221, 460 |
| CviJI | RGCY | 9 cut(s) | 109, 129, 186, 225, 232, 308, 351, 393, 430 |
| CviKI_1 | RGCY | 9 cut(s) | 109, 129, 186, 225, 232, 308, 351, 393, 430 |
| DpnI | GATC | 1 cut(s) | 17 |
| DpnII | GATC | 1 cut(s) | 15 |
| DraI | TTTAAA | 1 cut(s) | 7 |
| EaeI | YGGCCR | 1 cut(s) | 223 |
| Eco130I | CCWWGG | 3 cut(s) | 27, 104, 220 |
| Eco24I | GRGCYC | 1 cut(s) | 353 |
| EcoT14I | CCWWGG | 3 cut(s) | 27, 104, 220 |
| EcoT38I | GRGCYC | 1 cut(s) | 353 |
| ErhI | CCWWGG | 3 cut(s) | 27, 104, 220 |
| FaeI | CATG | 4 cut(s) | 31, 108, 224, 463 |
| FaiI | YATR | 8 cut(s) | 29, 106, 201, 222, 236, 411, 417, 461 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 329, 361 |
| FatI | CATG | 4 cut(s) | 27, 104, 220, 459 |
| Fnu4HI | GCNGC | 1 cut(s) | 187 |
| FokI | GGATG | 1 cut(s) | 442 |
| FriOI | GRGCYC | 1 cut(s) | 353 |
| Fsp4HI | GCNGC | 1 cut(s) | 187 |
| FspBI | CTAG | 1 cut(s) | 213 |
| GluI | GCNGC | 1 cut(s) | 187 |
| HaeIII | GGCC | 1 cut(s) | 225 |
| Hin1II | CATG | 4 cut(s) | 31, 108, 224, 463 |
| HindIII | AAGCTT | 1 cut(s) | 428 |
| HinfI | GANTC | 1 cut(s) | 319 |
| HphI | GGTGA | 1 cut(s) | 377 |
| HpyAV | CCTTC | 5 cut(s) | 33, 110, 141, 331, 367 |
| HpyCH4III | ACNGT | 3 cut(s) | 152, 288, 446 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 446 |
| Hsp92II | CATG | 4 cut(s) | 31, 108, 224, 463 |
| Kzo9I | GATC | 1 cut(s) | 15 |
| LpnPI | CCDG | 5 cut(s) | 26, 184, 196, 308, 355 |
| Lsp1109I | GCAGC | 1 cut(s) | 173 |
| MaeI | CTAG | 1 cut(s) | 213 |
| MaeIII | GTNAC | 1 cut(s) | 365 |
| MalI | GATC | 1 cut(s) | 17 |
| MboI | GATC | 1 cut(s) | 15 |
| MboII | GAAGA | 3 cut(s) | 197, 274, 340 |
| MflI | RGATCY | 1 cut(s) | 15 |
| MhlI | GDGCHC | 1 cut(s) | 353 |
| MluCI | AATT | 2 cut(s) | 49, 162 |
| MmeI | TCCRAC | 1 cut(s) | 85 |
| MnlI | CCTC | 3 cut(s) | 65, 68, 75 |
| MseI | TTAA | 2 cut(s) | 6, 74 |
| MslI | CAYNNNNRTG | 1 cut(s) | 225 |
| MspA1I | CMGCKG | 1 cut(s) | 186 |
| MssI | GTTTAAAC | 1 cut(s) | 7 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 446 |
| NcoI | CCATGG | 3 cut(s) | 27, 104, 220 |
| NdeII | GATC | 1 cut(s) | 15 |
| NlaIII | CATG | 4 cut(s) | 31, 108, 224, 463 |
| NmuCI | GTSAC | 1 cut(s) | 365 |
| PfeI | GAWTC | 1 cut(s) | 319 |
| PkrI | GCNGC | 1 cut(s) | 188 |
| PmeI | GTTTAAAC | 1 cut(s) | 7 |
| PsuI | RGATCY | 1 cut(s) | 15 |
| PvuII | CAGCTG | 1 cut(s) | 186 |
| RseI | CAYNNNNRTG | 1 cut(s) | 225 |
| SaqAI | TTAA | 2 cut(s) | 6, 74 |
| SatI | GCNGC | 1 cut(s) | 187 |
| Sau3AI | GATC | 1 cut(s) | 15 |
| SduI | GDGCHC | 1 cut(s) | 353 |
| SetI | ASST | 6 cut(s) | 40, 67, 188, 255, 395, 432 |
| SfcI | CTRYAG | 1 cut(s) | 234 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 225 |
| SmlI | CTYRAG | 1 cut(s) | 346 |
| SmoI | CTYRAG | 1 cut(s) | 346 |
| Sse9I | AATT | 2 cut(s) | 49, 162 |
| SsiI | CCGC | 1 cut(s) | 298 |
| SspMI | CTAG | 1 cut(s) | 213 |
| StyI | CCWWGG | 3 cut(s) | 27, 104, 220 |
| TaaI | ACNGT | 3 cut(s) | 152, 288, 446 |
| TasI | AATT | 2 cut(s) | 49, 162 |
| TfiI | GAWTC | 1 cut(s) | 319 |
| Tru1I | TTAA | 2 cut(s) | 6, 74 |
| Tru9I | TTAA | 2 cut(s) | 6, 74 |
| TseFI | GTSAC | 1 cut(s) | 365 |
| TseI | GCWGC | 1 cut(s) | 186 |
| Tsp45I | GTSAC | 1 cut(s) | 365 |
| TspDTI | ATGAA | 1 cut(s) | 123 |
| XspI | CTAG | 1 cut(s) | 213 |