RchiOBHm_Chr5g0020561

Polyketide cyclase / dehydrase and lipid transport

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
14785869 .. 14791439
5571 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2313 bp
ATGACGAAAACGCCCCTCCTCCAACACCCGCCACACAATTCCTGGACTCGCAAAGCAAACTGGTGGTCACCAATCAACGGTCGAGTTCTACACCCACTCCGACCCTCTCACTCTCGCTCTCCGACCCCAAAAACCTCGATGATCATCTCCAAAGCTTCAAACTTTACTGCCCACGGAGCTCTATCCCCTCTCTACACCCCCAAATGGGCCCTCAAAAGCCCACACCCTCACGTCTGCATGGTCTTCTCGTCCTCCGCCGACGGACCCAGATGGAACCAGTGCCACCATTTCAACGGCAACAAGAACGGCGCCGTATACAAGAAACCCAGAAGCGAAGAAGAGGCAGATGAAGAAGGAGGAGAGAGAAGGGTGAGCTGTGAAGTGGATATGATTTCGTGGCGGGAGCGCCGAGTCAAGGCCGAGATTTCGGTCAATGCCGACGTCGGTTCCGTCTGGAACGCTCTCACGGATTACGAGCGTCTTGCTGACTTCATCCCCAATCTTGTTTCCAGTGGGAGGATTCCATGTCCACATCCTGGGCGTATTTGGCTGGAGCAGAGAGGCTTGCAGAGAGCACTGTATTGGCACATTGAAGCTCGAGTTGTTTTGGACCTTCAGGAGTTTTCCAATTTGAGTGGTAATGATCGTGAGCTTCACTTTTCCATGGTTGATGGGGACTTCAAAAAGTTTGAAGGCAAATGGTCTGTGAAATGCGGGACAAGGTCATCATCAACAATTTTATCATATGAAGTAAATGTAATACCGAGATTCAACTTCCCTGCCATTTTCTTGGAGAGGATTATCAGATCAGATCTCCCTGTCAATCTTCGGGCCTTGGCTTGTAGGTCTGAAAAGGCTTTTGAAGGGGGGAAAAAGATAGCAATAGAAGAAAGCTCCAAGCCTAGCATGACTAATGGTGTCACTAGTTCACTCCAAAAAGACATGGATGGTTCTTTGTGTGAAAAGGATTATACACTTAACGAGTTTAAAGAGAATTTACCTGGCCCTACTGCTAAATCTTTGCCCCCAGCTTCTTCTGAGTTGAATAGTAATTGGGGTGTTTTTGGAAAAGTCTGCAGACTTGATAGGCCTTGCTTGGTGGATGAGGTTCATCTTCGGAGATTCGATGGTCTATTGGAAAATGGAGGCGTCCATCGTGGTGTTGTTGCTAGCATAACAGTAAAAGCTCCTGTTCGTGAAGTATGGGGTGTTTTGACAGCTTACGAAAGTCTTCCCGAGATAGTCCCGAATTTGGCAATCAGTCGGATATTGTCAAGAGAAAACAACAAAGTCCGAATTCTTCAGGAAGGATGTAAGGGCTTACTTTATATGGTACTTCATGCACGTGTTGTCCTAGACTTGTGCGAACTGCTTGAACAGGAGATAAGTTTTGAACAAGTTGAAGGGGACTTCGACTCATTTAGGGGTAAATGGGTTCTTGAGCAGCTAGGAAGTCATCACACGCTGTTGAAGTACACTGTTGAATCGAAAATGCGCAAGGATACTTTTCTCTCTGAAGCTATAATGGAAGAGGTCATATACGAAGATCTCCCTTCAAATTTATGTACAATACGAGACTACATAGAAAAGAGGGAGGTAGCACAGTCATCGAAAGCATGTGATGAAAAAATAAGCTTGGAGGAACAAACTGCTTCATCCAGTACAGACCATAATGATGATGGTTGTATAACAGTTGATCAATTGTCTGATTCCGATGCTCAGAGTTCATCTAGTCAAAGGCCAAGGGTCCCAGGATTGCAGAGGGATATTGAAGTTTTGAAAGCCGAGCTCCTGAAATTTATTGCAGAGCATGGGCAGGAAGGATTTATGCCCATGAGAAAGCAACTTCGTTTACGGGGAAGAGTAGATATTGAGAAAGCAATCACACGCATGGGTGGATTCAGAAGGATTGCAACACTGATGAATCTTTCTCTTGCTTATAAGCATCGAAAACCAAAGGGTTACTGGGATAATCTTGAGAATTTGCAGGAAGAGATTAGTCGATTTCAGAGGAGCTGGGGAATGGACCCTTCATACATGCCCAGCAGGAAGTCATTCGAGCGTGCAGGGCGGTATGACATTGCGCGTGCATTAGAAAAGTGGGGCGGCCTTCATGAAGTTTCACGTCTTCTGTCACTCAATGTGAGGCACCCCAATAGACGGCCGAACATTGCCAGGGATGTAAAAAGTGATCGTGTAGTATCAACTAACGCAGAGGGTGCAAAAGATGCACCATCCAATCCCTACGTATCTCAAGATACACAAAAGTGGATCTCAGAATTAAAGCATTTGGATATCAATTGGGTAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

770

Amino Acids

87.54

Weight (kDa)

8.38

Isoelectric Point (pI)

49.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Polyketide_cyc PF03364 144 - 279 1.9e-16 Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc PF03364 394 - 521 1.9e-17 Polyketide cyclase / dehydrase and lipid transport
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1941
AatII GACGTC 1 cut(s) 444
Acc16I TGCGCA 1 cut(s) 1496
AccB1I GGYRCC 2 cut(s) 308, 2148
AccB7I CCANNNNNTGG 1 cut(s) 536
AccI GTMKAC 1 cut(s) 315
AccII CGCG 1 cut(s) 2086
AciI CCGC 6 cut(s) 29, 255, 400, 714, 2071, 2106
AclWI GGATC 1 cut(s) 2279
AcoI YGGCCR 1 cut(s) 2162
AcsI RAATTY 6 cut(s) 994, 1249, 1296, 1558, 1796, 1981
AcuI CTGAAG 3 cut(s) 599, 1286, 1536
AcvI CACGTG 1 cut(s) 1346
AcyI GRCGYC 3 cut(s) 309, 441, 1149
AfaI GTAC 4 cut(s) 1335, 1475, 1567, 1663
AfiI CCNNNNNNNGG 8 cut(s) 77, 204, 205, 415, 516, 536, 1252, 2160
AflIII ACRYGT 1 cut(s) 1345
AhlI ACTAGT 1 cut(s) 923
AjiI CACGTC 2 cut(s) 232, 2126
AjnI CCWGG 5 cut(s) 41, 535, 1000, 1750, 2174
AleI CACNNNNGTG 1 cut(s) 2266
Alw21I GWGCWC 3 cut(s) 181, 577, 1791
Alw26I GTCTC 1 cut(s) 1569
AlwI GGATC 1 cut(s) 2279
Ama87I CYCGRG 2 cut(s) 597, 1235
AoxI GGCC 8 cut(s) 207, 417, 831, 1003, 1088, 1739, 2107, 2162
ApaI GGGCCC 1 cut(s) 211
ApeKI GCWGC 1 cut(s) 1444
ApoI RAATTY 6 cut(s) 994, 1249, 1296, 1558, 1796, 1981
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
Asp700I GAANNNNTTC 2 cut(s) 1230, 2054
AspLEI GCGC 4 cut(s) 311, 408, 1497, 2086
AspS9I GGNCC 8 cut(s) 207, 208, 263, 610, 831, 1004, 1747, 2026
AsuHPI GGTGA 2 cut(s) 60, 382
AsuNHI GCTAGC 1 cut(s) 1169
AvaI CYCGRG 2 cut(s) 597, 1235
AvaII GGWCC 4 cut(s) 263, 610, 1747, 2026
BaeGI GKGCMC 1 cut(s) 211
BanI GGYRCC 2 cut(s) 308, 2148
BanII GRGCYC 3 cut(s) 181, 211, 1791
BbrPI CACGTG 1 cut(s) 1346
BbsI GAAGAC 3 cut(s) 235, 1223, 2120
Bbv12I GWGCWC 3 cut(s) 181, 577, 1791
BbvI GCAGC 1 cut(s) 1456
BccI CCATC 7 cut(s) 264, 665, 941, 1121, 1161, 1673, 2242
BceAI ACGGC 4 cut(s) 296, 310, 322, 2177
BcgI CGANNNNNNTGC 4 cut(s) 464, 498, 1590, 1624
BciT130I CCWGG 5 cut(s) 43, 537, 1002, 1752, 2176
BciVI GTATCC 1 cut(s) 1495
BclI TGATCA 2 cut(s) 141, 1696
BcoDI GTCTC 1 cut(s) 1569
BcuI ACTAGT 1 cut(s) 923
BfaI CTAG 6 cut(s) 903, 924, 1170, 1355, 1448, 1731
BfmI CTRYAG 1 cut(s) 1075
BfoI RGCGCY 2 cut(s) 312, 409
BfuI GTATCC 1 cut(s) 1495
BglII AGATCT 2 cut(s) 811, 1546
BisI GCNGC 2 cut(s) 1445, 2107
BlsI GCNGC 2 cut(s) 1446, 2108
Bme1390I CCNGG 5 cut(s) 43, 537, 1002, 1752, 2176
Bme18I GGWCC 4 cut(s) 263, 610, 1747, 2026
BmeT110I CYCGRG 2 cut(s) 597, 1235
BmgBI CACGTC 2 cut(s) 232, 2126
BmgT120I GGNCC 8 cut(s) 207, 208, 263, 610, 831, 1004, 1747, 2026
BmiI GGNNCC 9 cut(s) 209, 265, 275, 310, 448, 1748, 1749, 2028, 2150
BmrFI CCNGG 5 cut(s) 43, 537, 1002, 1752, 2176
BmrI ACTGGG 1 cut(s) 1975
BmsI GCATC 3 cut(s) 1705, 1954, 2218
BmtI GCTAGC 1 cut(s) 1173
BmuI ACTGGG 1 cut(s) 1975
BpiI GAAGAC 3 cut(s) 235, 1223, 2120
BpmI CTGGAG 1 cut(s) 572
BpuEI CTTGAG 3 cut(s) 1460, 1997, 2238
BsaAI YACGTR 2 cut(s) 1346, 2248
BsaBI GATNNNNATC 1 cut(s) 143
BsaHI GRCGYC 3 cut(s) 309, 441, 1149
BsaJI CCNNGG 7 cut(s) 172, 536, 663, 834, 1742, 1750, 2175
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bsc4I CCNNNNNNNGG 8 cut(s) 77, 204, 205, 415, 516, 536, 1252, 2160
Bse1I ACTGG 5 cut(s) 65, 277, 510, 1659, 1970
Bse3DI GCAATG 2 cut(s) 2079, 2169
Bse8I GATNNNNATC 1 cut(s) 143
BseBI CCWGG 5 cut(s) 43, 537, 1002, 1752, 2176
BseDI CCNNGG 7 cut(s) 172, 536, 663, 834, 1742, 1750, 2175
BseGI GGATG 8 cut(s) 492, 532, 952, 1108, 1316, 1655, 2185, 2234
BseJI GATNNNNATC 1 cut(s) 143
BseLI CCNNNNNNNGG 8 cut(s) 77, 204, 205, 415, 516, 536, 1252, 2160
BseMI GCAATG 2 cut(s) 2079, 2169
BseMII CTCAG 3 cut(s) 1029, 1733, 2289
BseNI ACTGG 5 cut(s) 65, 277, 510, 1659, 1970
BseRI GAGGAG 3 cut(s) 8, 372, 2026
BseSI GKGCMC 1 cut(s) 211
BseX3I CGGCCG 1 cut(s) 2162
BseXI GCAGC 1 cut(s) 1456
BseYI CCCAGC 3 cut(s) 1027, 2016, 2042
BsgI GTGCAG 1 cut(s) 2085
Bsh1236I CGCG 1 cut(s) 2086
Bsh1285I CGRYCG 2 cut(s) 82, 2165
BshFI GGCC 8 cut(s) 209, 419, 833, 1005, 1090, 1741, 2109, 2164
BshNI GGYRCC 2 cut(s) 308, 2148
BsiEI CGRYCG 2 cut(s) 82, 2165
BsiHKAI GWGCWC 3 cut(s) 181, 577, 1791
BsiHKCI CYCGRG 2 cut(s) 597, 1235
BslFI GGGAC 5 cut(s) 689, 730, 1229, 1421, 1733
BslI CCNNNNNNNGG 8 cut(s) 77, 204, 205, 415, 516, 536, 1252, 2160
BsmAI GTCTC 1 cut(s) 1569
BsmFI GGGAC 5 cut(s) 689, 730, 1229, 1421, 1733
BsnI GGCC 8 cut(s) 209, 419, 833, 1005, 1090, 1741, 2109, 2164
BsoBI CYCGRG 2 cut(s) 597, 1235
Bsp120I GGGCCC 1 cut(s) 207
Bsp1286I GDGCHC 4 cut(s) 181, 211, 577, 1791
Bsp1407I TGTACA 1 cut(s) 1565
Bsp143I GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
Bsp19I CCATGG 1 cut(s) 663
BspACI CCGC 6 cut(s) 29, 255, 400, 714, 2071, 2106
BspANI GGCC 8 cut(s) 209, 419, 833, 1005, 1090, 1741, 2109, 2164
BspCNI CTCAG 3 cut(s) 1030, 1732, 2288
BspFNI CGCG 1 cut(s) 2086
BspHI TCATGA 1 cut(s) 2113
BspLI GGNNCC 9 cut(s) 209, 265, 275, 310, 448, 1748, 1749, 2028, 2150
BspMAI CTGCAG 1 cut(s) 1079
BspOI GCTAGC 1 cut(s) 1173
BspPI GGATC 1 cut(s) 2279
BspT107I GGYRCC 2 cut(s) 308, 2148
BsrDI GCAATG 2 cut(s) 2079, 2169
BsrGI TGTACA 1 cut(s) 1565
BsrI ACTGG 5 cut(s) 65, 277, 510, 1659, 1970
BssECI CCNNGG 7 cut(s) 172, 536, 663, 834, 1742, 1750, 2175
BssMI GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
BssNAI GTATAC 1 cut(s) 316
BssNI GRCGYC 3 cut(s) 309, 441, 1149
BssT1I CCWWGG 3 cut(s) 663, 834, 1742
Bst1107I GTATAC 1 cut(s) 316
Bst2UI CCWGG 5 cut(s) 43, 537, 1002, 1752, 2176
Bst4CI ACNGT 6 cut(s) 80, 579, 1180, 1480, 1605, 1693
Bst6I CTCTTC 4 cut(s) 333, 1524, 1855, 1986
BstACI GRCGYC 3 cut(s) 309, 441, 1149
BstAPI GCANNNNNTGC 2 cut(s) 2219, 2228
BstAUI TGTACA 1 cut(s) 1565
BstBAI YACGTR 2 cut(s) 1346, 2248
BstC8I GCNNGC 4 cut(s) 566, 1171, 2064, 2088
BstDEI CTNAG 3 cut(s) 1038, 1719, 2275
BstDSI CCRYGG 2 cut(s) 172, 663
BstEII GGTNACC 1 cut(s) 66
BstF5I GGATG 8 cut(s) 492, 532, 952, 1108, 1316, 1655, 2185, 2234
BstFNI CGCG 1 cut(s) 2086
BstH2I RGCGCY 2 cut(s) 312, 409
BstHHI GCGC 4 cut(s) 311, 408, 1497, 2086
BstKTI GATC 8 cut(s) 144, 646, 809, 814, 1549, 1699, 2194, 2274
BstMAI GTCTC 1 cut(s) 1569
BstMBI GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
BstMCI CGRYCG 2 cut(s) 82, 2165
BstMWI GCNNNNNNNGC 5 cut(s) 176, 547, 2068, 2219, 2228
BstNI CCWGG 5 cut(s) 43, 537, 1002, 1752, 2176
BstNSI RCATGY 2 cut(s) 1620, 2041
BstPI GGTNACC 1 cut(s) 66
BstSCI CCNGG 5 cut(s) 41, 535, 1000, 1750, 2174
BstSFI CTRYAG 1 cut(s) 1075
BstSLI GKGCMC 1 cut(s) 211
BstSNI TACGTA 1 cut(s) 2248
BstUI CGCG 1 cut(s) 2086
BstV1I GCAGC 1 cut(s) 1456
BstV2I GAAGAC 3 cut(s) 235, 1223, 2120
BstX2I RGATCY 3 cut(s) 811, 1546, 2271
BstXI CCANNNNNNTGG 1 cut(s) 790
BstYI RGATCY 3 cut(s) 811, 1546, 2271
BstZ17I GTATAC 1 cut(s) 316
BstZI CGGCCG 1 cut(s) 2162
BsuI GTATCC 1 cut(s) 1495
BsuRI GGCC 8 cut(s) 209, 419, 833, 1005, 1090, 1741, 2109, 2164
BtgI CCRYGG 2 cut(s) 172, 663
BtrI CACGTC 2 cut(s) 232, 2126
BtsCI GGATG 8 cut(s) 492, 532, 952, 1108, 1316, 1655, 2185, 2234
BtsIMutI CAGTG 5 cut(s) 284, 517, 575, 1476, 1916
Cac8I GCNNGC 4 cut(s) 566, 1171, 2064, 2088
CciI TCATGA 1 cut(s) 2113
CfoI GCGC 4 cut(s) 311, 408, 1497, 2086
Cfr13I GGNCC 8 cut(s) 207, 208, 263, 610, 831, 1004, 1747, 2026
CseI GACGC 2 cut(s) 467, 1138
Csp6I GTAC 4 cut(s) 1334, 1474, 1566, 1662
CspCI CAANNNNNGTGG 2 cut(s) 616, 651
CviQI GTAC 4 cut(s) 1334, 1474, 1566, 1662
DdeI CTNAG 3 cut(s) 1038, 1719, 2275
DinI GGCGCC 1 cut(s) 310
DpnI GATC 8 cut(s) 143, 645, 808, 813, 1548, 1698, 2193, 2273
DpnII GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
DraI TTTAAA 1 cut(s) 988
EaeI YGGCCR 1 cut(s) 2162
EagI CGGCCG 1 cut(s) 2162
Eam1104I CTCTTC 4 cut(s) 333, 1524, 1855, 1986
EarI CTCTTC 4 cut(s) 333, 1524, 1855, 1986
EciI GGCGGA 1 cut(s) 244
Ecl136II GAGCTC 2 cut(s) 179, 1789
EclXI CGGCCG 1 cut(s) 2162
Eco105I TACGTA 1 cut(s) 2248
Eco130I CCWWGG 3 cut(s) 663, 834, 1742
Eco147I AGGCCT 1 cut(s) 1090
Eco24I GRGCYC 3 cut(s) 181, 211, 1791
Eco32I GATATC 1 cut(s) 2296
Eco47I GGWCC 4 cut(s) 263, 610, 1747, 2026
Eco52I CGGCCG 1 cut(s) 2162
Eco53kI GAGCTC 2 cut(s) 179, 1789
Eco57I CTGAAG 3 cut(s) 599, 1286, 1536
Eco72I CACGTG 1 cut(s) 1346
Eco88I CYCGRG 2 cut(s) 597, 1235
Eco91I GGTNACC 1 cut(s) 66
EcoICRI GAGCTC 2 cut(s) 179, 1789
EcoO109I RGGNCCY 2 cut(s) 208, 1747
EcoO65I GGTNACC 1 cut(s) 66
EcoRI GAATTC 1 cut(s) 1296
EcoRII CCWGG 5 cut(s) 41, 535, 1000, 1750, 2174
EcoRV GATATC 1 cut(s) 2296
EcoT14I CCWWGG 3 cut(s) 663, 834, 1742
EcoT38I GRGCYC 3 cut(s) 181, 211, 1791
EgeI GGCGCC 1 cut(s) 310
EheI GGCGCC 1 cut(s) 310
ErhI CCWWGG 3 cut(s) 663, 834, 1742
FaqI GGGAC 5 cut(s) 689, 730, 1229, 1421, 1733
FauI CCCGC 3 cut(s) 36, 393, 707
FauNDI CATATG 1 cut(s) 745
FbaI TGATCA 2 cut(s) 141, 1696
FblI GTMKAC 1 cut(s) 315
Fnu4HI GCNGC 2 cut(s) 1445, 2107
FokI GGATG 8 cut(s) 479, 519, 959, 1115, 1323, 1642, 2192, 2221
FriOI GRGCYC 3 cut(s) 181, 211, 1791
Fsp4HI GCNGC 2 cut(s) 1445, 2107
FspBI CTAG 6 cut(s) 903, 924, 1170, 1355, 1448, 1731
FspI TGCGCA 1 cut(s) 1496
GlaI GCGC 4 cut(s) 310, 407, 1496, 2085
GluI GCNGC 2 cut(s) 1445, 2107
GsaI CCCAGC 3 cut(s) 1031, 2020, 2046
GsuI CTGGAG 1 cut(s) 572
HaeII RGCGCY 2 cut(s) 312, 409
HaeIII GGCC 8 cut(s) 209, 419, 833, 1005, 1090, 1741, 2109, 2164
HgaI GACGC 2 cut(s) 467, 1138
HhaI GCGC 4 cut(s) 311, 408, 1497, 2086
Hin1I GRCGYC 3 cut(s) 309, 441, 1149
Hin6I GCGC 4 cut(s) 309, 406, 1495, 2084
HinP1I GCGC 4 cut(s) 309, 406, 1495, 2084
HindIII AAGCTT 2 cut(s) 153, 1633
HphI GGTGA 2 cut(s) 60, 382
Hpy166II GTNNAC 5 cut(s) 316, 530, 929, 1476, 1853
Hpy8I GTNNAC 5 cut(s) 316, 530, 929, 1476, 1853
Hpy99I CGWCG 3 cut(s) 263, 443, 446
HpyCH4III ACNGT 6 cut(s) 80, 579, 1180, 1480, 1605, 1693
HpyCH4IV ACGT 5 cut(s) 231, 441, 1345, 2125, 2247
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 547, 2068, 2219, 2228
HpyF3I CTNAG 3 cut(s) 1038, 1719, 2275
HpySE526I ACGT 5 cut(s) 231, 441, 1345, 2125, 2247
Hsp92I GRCGYC 3 cut(s) 309, 441, 1149
HspAI GCGC 4 cut(s) 309, 406, 1495, 2084
KasI GGCGCC 1 cut(s) 308
KflI GGGWCCC 1 cut(s) 1747
Ksp22I TGATCA 2 cut(s) 141, 1696
Kzo9I GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
LmnI GCTCC 7 cut(s) 176, 403, 553, 899, 1192, 1794, 2013
Lsp1109I GCAGC 1 cut(s) 1456
LweI GCATC 3 cut(s) 1705, 1954, 2218
MaeI CTAG 6 cut(s) 903, 924, 1170, 1355, 1448, 1731
MaeII ACGT 5 cut(s) 231, 441, 1345, 2125, 2247
MaeIII GTNAC 4 cut(s) 66, 919, 1961, 2133
MalI GATC 8 cut(s) 143, 645, 808, 813, 1548, 1698, 2193, 2273
MboI GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
MfeI CAATTG 2 cut(s) 1700, 2299
MflI RGATCY 3 cut(s) 811, 1546, 2271
MhlI GDGCHC 4 cut(s) 181, 211, 577, 1791
Mly113I GGCGCC 1 cut(s) 309
MlyI GAGTC 3 cut(s) 40, 420, 1409
MmeI TCCRAC 4 cut(s) 46, 124, 146, 1244
MroXI GAANNNNTTC 2 cut(s) 1230, 2054
MseI TTAA 3 cut(s) 978, 987, 2282
MslI CAYNNNNRTG 5 cut(s) 1158, 1344, 1674, 1889, 2266
MspR9I CCNGG 5 cut(s) 43, 537, 1002, 1752, 2176
MunI CAATTG 2 cut(s) 1700, 2299
MvaI CCWGG 5 cut(s) 43, 537, 1002, 1752, 2176
MvnI CGCG 1 cut(s) 2086
MwoI GCNNNNNNNGC 5 cut(s) 176, 547, 2068, 2219, 2228
NarI GGCGCC 1 cut(s) 309
NcoI CCATGG 1 cut(s) 663
NdeI CATATG 1 cut(s) 745
NdeII GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
NheI GCTAGC 1 cut(s) 1169
NlaIV GGNNCC 9 cut(s) 209, 265, 275, 310, 448, 1748, 1749, 2028, 2150
NmeAIII GCCGAG 3 cut(s) 434, 445, 1810
NmuCI GTSAC 3 cut(s) 66, 919, 2133
NsbI TGCGCA 1 cut(s) 1496
NspI RCATGY 2 cut(s) 1620, 2041
OliI CACNNNNGTG 1 cut(s) 2266
PaeR7I CTCGAG 1 cut(s) 597
PagI TCATGA 1 cut(s) 2113
PceI AGGCCT 1 cut(s) 1090
PcsI WCGNNNNNNNCGW 1 cut(s) 447
PdmI GAANNNNTTC 2 cut(s) 1230, 2054
PfeI GAWTC 7 cut(s) 520, 768, 1122, 1484, 1709, 1899, 1924
PflFI GACNNNGTC 1 cut(s) 721
PflMI CCANNNNNTGG 1 cut(s) 536
PfoI TCCNGGA 1 cut(s) 41
PkrI GCNGC 2 cut(s) 1446, 2108
PleI GAGTC 3 cut(s) 40, 419, 1409
PluTI GGCGCC 1 cut(s) 312
PmaCI CACGTG 1 cut(s) 1346
PmlI CACGTG 1 cut(s) 1346
PpsI GAGTC 3 cut(s) 40, 419, 1409
Ppu21I YACGTR 2 cut(s) 1346, 2248
PpuMI RGGWCCY 1 cut(s) 1747
PsiI TTATAA 1 cut(s) 1941
Psp124BI GAGCTC 2 cut(s) 181, 1791
Psp5II RGGWCCY 1 cut(s) 1747
Psp6I CCWGG 5 cut(s) 41, 535, 1000, 1750, 2174
PspCI CACGTG 1 cut(s) 1346
PspEI GGTNACC 1 cut(s) 66
PspFI CCCAGC 3 cut(s) 1027, 2016, 2042
PspGI CCWGG 5 cut(s) 41, 535, 1000, 1750, 2174
PspN4I GGNNCC 9 cut(s) 209, 265, 275, 310, 448, 1748, 1749, 2028, 2150
PspOMI GGGCCC 1 cut(s) 207
PspPI GGNCC 8 cut(s) 207, 208, 263, 610, 831, 1004, 1747, 2026
PspPPI RGGWCCY 1 cut(s) 1747
PspXI VCTCGAGB 1 cut(s) 597
PstI CTGCAG 1 cut(s) 1079
PsuI RGATCY 3 cut(s) 811, 1546, 2271
PsyI GACNNNGTC 1 cut(s) 721
RsaI GTAC 4 cut(s) 1335, 1475, 1567, 1663
RsaNI GTAC 4 cut(s) 1334, 1474, 1566, 1662
RseI CAYNNNNRTG 5 cut(s) 1158, 1344, 1674, 1889, 2266
SacI GAGCTC 2 cut(s) 181, 1791
SaqAI TTAA 3 cut(s) 978, 987, 2282
SatI GCNGC 2 cut(s) 1445, 2107
Sau3AI GATC 8 cut(s) 141, 643, 806, 811, 1546, 1696, 2191, 2271
Sau96I GGNCC 8 cut(s) 207, 208, 263, 610, 831, 1004, 1747, 2026
SchI GAGTC 3 cut(s) 40, 420, 1409
ScrFI CCNGG 5 cut(s) 43, 537, 1002, 1752, 2176
SduI GDGCHC 4 cut(s) 181, 211, 577, 1791
SfaNI GCATC 3 cut(s) 1705, 1954, 2218
SfcI CTRYAG 1 cut(s) 1075
SfoI GGCGCC 1 cut(s) 310
Sfr274I CTCGAG 1 cut(s) 597
SinI GGWCC 4 cut(s) 263, 610, 1747, 2026
SlaI CTCGAG 1 cut(s) 597
SmiMI CAYNNNNRTG 5 cut(s) 1158, 1344, 1674, 1889, 2266
SmlI CTYRAG 4 cut(s) 597, 1439, 1976, 2253
SmoI CTYRAG 4 cut(s) 597, 1439, 1976, 2253
SnaBI TACGTA 1 cut(s) 2248
SpeI ACTAGT 1 cut(s) 923
SseBI AGGCCT 1 cut(s) 1090
SsiI CCGC 6 cut(s) 29, 255, 400, 714, 2071, 2106
SspDI GGCGCC 1 cut(s) 308
SspMI CTAG 6 cut(s) 903, 924, 1170, 1355, 1448, 1731
SstI GAGCTC 2 cut(s) 181, 1791
StuI AGGCCT 1 cut(s) 1090
StyD4I CCNGG 5 cut(s) 41, 535, 1000, 1750, 2174
StyI CCWWGG 3 cut(s) 663, 834, 1742
TaaI ACNGT 6 cut(s) 80, 579, 1180, 1480, 1605, 1693
TaiI ACGT 5 cut(s) 234, 444, 1348, 2128, 2250
TaqII GACCGA 1 cut(s) 418
TatI WGTACW 3 cut(s) 1473, 1565, 1661
TauI GCSGC 1 cut(s) 2109
TfiI GAWTC 7 cut(s) 520, 768, 1122, 1484, 1709, 1899, 1924
Tru1I TTAA 3 cut(s) 978, 987, 2282
Tru9I TTAA 3 cut(s) 978, 987, 2282
TscAI CASTG 5 cut(s) 284, 517, 582, 1483, 1923
TseFI GTSAC 3 cut(s) 66, 919, 2133
TseI GCWGC 1 cut(s) 1444
Tsp45I GTSAC 3 cut(s) 66, 919, 2133
TspGWI ACGGA 4 cut(s) 189, 276, 439, 482
TspRI CASTG 5 cut(s) 284, 517, 582, 1483, 1923
Tth111I GACNNNGTC 1 cut(s) 721
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 4 cut(s) 263, 610, 1747, 2026
XapI RAATTY 6 cut(s) 994, 1249, 1296, 1558, 1796, 1981
XceI RCATGY 2 cut(s) 1620, 2041
XcmI CCANNNNNNNNNTGG 3 cut(s) 39, 1676, 1962
XhoI CTCGAG 1 cut(s) 597
XmiI GTMKAC 1 cut(s) 315
XmnI GAANNNNTTC 2 cut(s) 1230, 2054
XspI CTAG 6 cut(s) 903, 924, 1170, 1355, 1448, 1731
ZraI GACGTC 1 cut(s) 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.