Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010004

Physical Location & Seq

Genomic Coordinates Reverse (-)

25520204 .. 25524124

Gene Structure 3921 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGATCACCCACCGACCAACGGCTCAGATTCCTCCTCCTCCTCCTCCGACCTCCCCTACCAGTCCGGCTTCCACAACCACTTCTCCTCCGAAGCTCTCCCCGGCGCTCTCCCCCTCGGCCAGAGCAACCCCCTCCTCTGCCCCTACGGCCTCTACGCCGAGCAACTCTCCGGCACCTCCTTCACCTCCCCCCGCAAGCTCAACCTCCGCACCTGGCTCTACCGCGTCAAGCCCTCCGTCACTCACGAGCCCTTCCAGCCGCTCCGGCCCACCCACGGGAGGCTCGTCAGCGAGTTCAACGACTCCAACAGCTCCACCACTCCGACTCAGCTGAGGTGGAAGCCGGTCGAGATTCCGGAGACGCCGACCGACTTTGTGCGGGGGTTGTACACCGTGTGCGGAGCTGGGAGCTCGTTCCTCCGCCATGGCTTTGCTATTCACATGTACACTGCGAACAAGTCGATGGATGATCGTGCCTTTTGCAATGCTGATGGAGATTTCTTGATAGTCCCCCAATTAGGAAGGCTCTGGATCACTACAGAATGTGGAAGATTGATAGTTTCTCCTGGTGAAGTTGCTGTATTACCTCAAGGATTTAGATTTGCAGTAGATCTTCCTGATGGCCCTTCACGAGGTTATGTAGCTGAGGTTTTTGGCACCCATTTTCAACTCCCTGATCTTGGGCCAATAGGAGCTAATGGCCTTGCTGCTCCAAGGGATTTTCTTGTTCCCACAGCATGGTTTGAAAAAACTACCCGTCCAGGCTACATCATTATACAAAAATTTGGTGGAGAACTTTTTACTGCAAAGCAGGATTTCTCTCCATTTAATGTAGTTGCTTGGCATGGTAATTATGCTCCATATAAGTATGATCTGACGAAGTTCTGCCCATTCAACACAGTCTTGTTTGATCATGGTGATCCTTCTGTAAATACAGTATTGACAGCACCAACTGATAAACCTGGTGTTGCATTGCTGGATTTTGCCATTTTCCCTCCTCGATGGTTGGTTGCTGAGCATACATTCCGACCTCCATACTACCATCGTAATTGTATGAGTGAATTTATGGGACTCATTTACGGTGGATATGAGGCAAAAGCAGATGGGTTTCTTCCAGGTGGTGCAAGCCTCCATAGCTGCATGACTCCTCATGGTCCTGATACGAAGACATATGAGGCTACCATTTCACGCGGAAATGATGTAGGACCACAAAAAATAAGTGATACTATGGCTTTTATGTTCGAATCGTGTTTAGTCCCCCGAATTTGCTCATGGGCTCTTGAGTCTCCCTTCATAGATCATGACTATTACCAGTGCTGGATCGGACTAAGATCACACTTCACAGGCACAGGGGCAGATGCTAAAGATGGAGATATCCAGAATGGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004411 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009987 GO:0016054 GO:0016491 GO:0016701 GO:0016702 GO:0018958 GO:0019336 GO:0019439 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0051213 GO:0055114 GO:0071704 GO:0072329 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

HgmA

Protein Analysis

463

Amino Acids

51.15

Weight (kDa)

5.87

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HgmA_N	PF20510	20 - 292	8.9e-129	Homogentisate 1,2-dioxygenase N-terminal
HgmA_C	PF04209	294 - 447	4.9e-76	Homogentisate 1,2-dioxygenase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54080 AT5G54080
fragaria_vesca	FvH4_3g19020 FvH4_3g19020 FvH4_3g19020
malus_domestica	MD03G1237300.v1.1 MD03G1237500.v1.1
prunus_persica	Prupe.4G172100_v2.0.a1
pyrus_communis	pycom03g18320
rosa_chinensis	RchiOBHm_Chr5g0031821
rosa_laevigata	RLG00000033349
rosa_multiflora	Rmu_co8454513.1_g000001 Rmu_sc0006847.1_g000029
rosa_roxburghii	Rroxscaffold_1G00048450
rosa_rugosa	Rorug05G0127800 Rorug05G0127900
rosa_samantha	Rh5AG222100 Rh5BG222100 Rh5CG245400 Rh5DG227000
rosa_wichuraiana	Rw5G020250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	173, 656
AccB7I	CCANNNNNTGG	1 cut(s)	738
AccBSI	CCGCTC	1 cut(s)	262
AccII	CGCG	2 cut(s)	225, 1191
AccIII	TCCGGA	1 cut(s)	355
AciI	CCGC	8 cut(s)	193, 208, 223, 260, 379, 399, 421, 1191
AclWI	GGATC	4 cut(s)	12, 539, 914, 1328
AcoI	YGGCCR	1 cut(s)	118
AcsI	RAATTY	3 cut(s)	782, 1061, 1263
AcyI	GRCGYC	1 cut(s)	362
AdeI	CACNNNGTG	1 cut(s)	396
AfaI	GTAC	2 cut(s)	389, 446
AfiI	CCNNNNNNNGG	8 cut(s)	20, 275, 276, 279, 518, 632, 680, 738
AflIII	ACRYGT	1 cut(s)	441
AgsI	TTSAA	4 cut(s)	298, 668, 746, 895
AjnI	CCWGG	5 cut(s)	212, 565, 760, 961, 1114
AluBI	AGCT	9 cut(s)	95, 199, 312, 331, 404, 411, 644, 695, 1137
AluI	AGCT	9 cut(s)	95, 199, 312, 331, 404, 411, 644, 695, 1137
Alw21I	GWGCWC	1 cut(s)	413
Alw26I	GTCTC	2 cut(s)	353, 1290
AlwI	GGATC	4 cut(s)	12, 539, 914, 1328
Aor13HI	TCCGGA	1 cut(s)	355
AoxI	GGCC	6 cut(s)	118, 148, 266, 622, 683, 700
ApeKI	GCWGC	2 cut(s)	707, 1137
ApoI	RAATTY	3 cut(s)	782, 1061, 1263
AspLEI	GCGC	1 cut(s)	107
AspS9I	GGNCC	5 cut(s)	267, 623, 683, 1154, 1205
AsuC2I	CCSGG	1 cut(s)	102
AsuHPI	GGTGA	3 cut(s)	175, 581, 929
AsuII	TTCGAA	1 cut(s)	1242
AvaII	GGWCC	2 cut(s)	1154, 1205
BanI	GGYRCC	2 cut(s)	173, 656
BanII	GRGCYC	3 cut(s)	252, 413, 1279
BauI	CACGAG	2 cut(s)	245, 630
BbsI	GAAGAC	1 cut(s)	1172
Bbv12I	GWGCWC	1 cut(s)	413
BbvCI	CCTCAGC	2 cut(s)	332, 645
BbvI	GCAGC	2 cut(s)	694, 1124
BccI	CCATC	7 cut(s)	457, 485, 614, 996, 1050, 1097, 1361
BceAI	ACGGC	2 cut(s)	37, 163
BciT130I	CCWGG	5 cut(s)	214, 567, 762, 963, 1116
BclI	TGATCA	1 cut(s)	910
BcnI	CCSGG	1 cut(s)	102
BcoDI	GTCTC	2 cut(s)	353, 1290
BfmI	CTRYAG	1 cut(s)	537
BfoI	RGCGCY	1 cut(s)	108
BglI	GCCNNNNNGGC	2 cut(s)	147, 265
BglII	AGATCT	1 cut(s)	610
BisI	GCNGC	3 cut(s)	260, 708, 1138
BlpI	GCTNAGC	1 cut(s)	1014
BlsI	GCNGC	3 cut(s)	261, 709, 1139
Bme1390I	CCNGG	6 cut(s)	102, 214, 567, 762, 963, 1116
Bme18I	GGWCC	2 cut(s)	1154, 1205
BmgT120I	GGNCC	5 cut(s)	267, 623, 683, 1154, 1205
BmiI	GGNNCC	2 cut(s)	175, 658
BmrFI	CCNGG	6 cut(s)	102, 214, 567, 762, 963, 1116
BmsI	GCATC	1 cut(s)	1348
BpiI	GAAGAC	1 cut(s)	1172
BplI	GAGNNNNNCTC	2 cut(s)	152, 184
Bpu10I	CCTNAGC	2 cut(s)	332, 645
Bpu1102I	GCTNAGC	1 cut(s)	1014
Bpu14I	TTCGAA	1 cut(s)	1242
BpuEI	CTTGAG	2 cut(s)	573, 1301
BpuMI	CCSGG	1 cut(s)	102
BsaHI	GRCGYC	1 cut(s)	362
BsaJI	CCNNGG	5 cut(s)	100, 115, 274, 424, 713
BsaWI	WCCGGW	1 cut(s)	355
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 71, 98, 101
Bsc4I	CCNNNNNNNGG	8 cut(s)	20, 275, 276, 279, 518, 632, 680, 738
Bse118I	RCCGGY	1 cut(s)	343
Bse1I	ACTGG	2 cut(s)	61, 1312
Bse3DI	GCAATG	2 cut(s)	490, 971
BseAI	TCCGGA	1 cut(s)	355
BseBI	CCWGG	5 cut(s)	214, 567, 762, 963, 1116
BseDI	CCNNGG	5 cut(s)	100, 115, 274, 424, 713
BseGI	GGATG	1 cut(s)	472
BseLI	CCNNNNNNNGG	8 cut(s)	20, 275, 276, 279, 518, 632, 680, 738
BseMI	GCAATG	2 cut(s)	490, 971
BseMII	CTCAG	5 cut(s)	39, 323, 341, 636, 1005
BseNI	ACTGG	2 cut(s)	61, 1312
BseRI	GAGGAG	8 cut(s)	25, 28, 31, 34, 76, 125, 987, 1137
BseXI	GCAGC	2 cut(s)	694, 1124
BseYI	CCCAGC	1 cut(s)	404
Bsh1236I	CGCG	2 cut(s)	225, 1191
Bsh1285I	CGRYCG	2 cut(s)	348, 369
BshFI	GGCC	6 cut(s)	120, 150, 268, 624, 685, 702
BshNI	GGYRCC	2 cut(s)	173, 656
BsiEI	CGRYCG	2 cut(s)	348, 369
BsiHKAI	GWGCWC	1 cut(s)	413
BsiSI	CCGG	6 cut(s)	66, 102, 171, 265, 344, 356
BslFI	GGGAC	3 cut(s)	494, 1083, 1241
BslI	CCNNNNNNNGG	8 cut(s)	20, 275, 276, 279, 518, 632, 680, 738
BsmAI	GTCTC	2 cut(s)	353, 1290
BsmBI	CGTCTC	1 cut(s)	353
BsmFI	GGGAC	3 cut(s)	494, 1083, 1241
BsnI	GGCC	6 cut(s)	120, 150, 268, 624, 685, 702
Bsp119I	TTCGAA	1 cut(s)	1242
Bsp1286I	GDGCHC	3 cut(s)	252, 413, 1279
Bsp13I	TCCGGA	1 cut(s)	355
Bsp1407I	TGTACA	2 cut(s)	387, 444
Bsp1720I	GCTNAGC	1 cut(s)	1014
Bsp19I	CCATGG	1 cut(s)	424
BspACI	CCGC	8 cut(s)	193, 208, 223, 260, 379, 399, 421, 1191
BspANI	GGCC	6 cut(s)	120, 150, 268, 624, 685, 702
BspCNI	CTCAG	5 cut(s)	38, 324, 340, 637, 1006
BspEI	TCCGGA	1 cut(s)	355
BspFNI	CGCG	2 cut(s)	225, 1191
BspHI	TCATGA	1 cut(s)	1300
BspLI	GGNNCC	2 cut(s)	175, 658
BspPI	GGATC	4 cut(s)	12, 539, 914, 1328
BspT104I	TTCGAA	1 cut(s)	1242
BspT107I	GGYRCC	2 cut(s)	173, 656
BsrBI	CCGCTC	1 cut(s)	262
BsrDI	GCAATG	2 cut(s)	490, 971
BsrFI	RCCGGY	1 cut(s)	343
BsrGI	TGTACA	2 cut(s)	387, 444
BsrI	ACTGG	2 cut(s)	61, 1312
BssAI	RCCGGY	1 cut(s)	343
BssECI	CCNNGG	5 cut(s)	100, 115, 274, 424, 713
BssNI	GRCGYC	1 cut(s)	362
BssSI	CACGAG	2 cut(s)	245, 630
BssT1I	CCWWGG	2 cut(s)	424, 713
Bst2BI	CACGAG	2 cut(s)	245, 630
Bst2UI	CCWGG	5 cut(s)	214, 567, 762, 963, 1116
Bst4CI	ACNGT	4 cut(s)	394, 901, 937, 1082
BstACI	GRCGYC	1 cut(s)	362
BstAUI	TGTACA	2 cut(s)	387, 444
BstBI	TTCGAA	1 cut(s)	1242
BstC8I	GCNNGC	2 cut(s)	197, 1126
BstDEI	CTNAG	6 cut(s)	25, 327, 332, 645, 1014, 1328
BstDSI	CCRYGG	2 cut(s)	274, 424
BstENI	CCTNNNNNAGG	1 cut(s)	630
BstF5I	GGATG	1 cut(s)	472
BstFNI	CGCG	2 cut(s)	225, 1191
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	1 cut(s)	107
BstMAI	GTCTC	2 cut(s)	353, 1290
BstMCI	CGRYCG	2 cut(s)	348, 369
BstMWI	GCNNNNNNNGC	4 cut(s)	147, 256, 265, 1134
BstNI	CCWGG	5 cut(s)	214, 567, 762, 963, 1116
BstNSI	RCATGY	1 cut(s)	445
BstSCI	CCNGG	6 cut(s)	100, 212, 565, 760, 961, 1114
BstSFI	CTRYAG	1 cut(s)	537
BstUI	CGCG	2 cut(s)	225, 1191
BstV1I	GCAGC	2 cut(s)	694, 1124
BstV2I	GAAGAC	1 cut(s)	1172
BstX2I	RGATCY	1 cut(s)	610
BstYI	RGATCY	1 cut(s)	610
BsuRI	GGCC	6 cut(s)	120, 150, 268, 624, 685, 702
BtgI	CCRYGG	2 cut(s)	274, 424
BtsCI	GGATG	1 cut(s)	472
BtsI	GCAGTG	1 cut(s)	447
BtsIMutI	CAGTG	2 cut(s)	447, 1319
Cac8I	GCNNGC	2 cut(s)	197, 1126
CciI	TCATGA	1 cut(s)	1300
CfoI	GCGC	1 cut(s)	107
Cfr10I	RCCGGY	1 cut(s)	343
Cfr13I	GGNCC	5 cut(s)	267, 623, 683, 1154, 1205
CseI	GACGC	2 cut(s)	214, 370
CsiI	ACCWGGT	1 cut(s)	961
Csp6I	GTAC	2 cut(s)	388, 445
CviAII	CATG	9 cut(s)	425, 442, 738, 845, 914, 1141, 1151, 1272, 1301
CviQI	GTAC	2 cut(s)	388, 445
DdeI	CTNAG	6 cut(s)	25, 327, 332, 645, 1014, 1328
DraIII	CACNNNGTG	1 cut(s)	396
EaeI	YGGCCR	1 cut(s)	118
EciI	GGCGGA	1 cut(s)	410
Ecl136II	GAGCTC	1 cut(s)	411
Eco130I	CCWWGG	2 cut(s)	424, 713
Eco24I	GRGCYC	3 cut(s)	252, 413, 1279
Eco32I	GATATC	1 cut(s)	1375
Eco47I	GGWCC	2 cut(s)	1154, 1205
Eco53kI	GAGCTC	1 cut(s)	411
EcoICRI	GAGCTC	1 cut(s)	411
EcoNI	CCTNNNNNAGG	1 cut(s)	630
EcoRII	CCWGG	5 cut(s)	212, 565, 760, 961, 1114
EcoRV	GATATC	1 cut(s)	1375
EcoT14I	CCWWGG	2 cut(s)	424, 713
EcoT38I	GRGCYC	3 cut(s)	252, 413, 1279
ErhI	CCWWGG	2 cut(s)	424, 713
Esp3I	CGTCTC	1 cut(s)	353
FaeI	CATG	9 cut(s)	428, 445, 741, 848, 917, 1144, 1154, 1275, 1304
FaqI	GGGAC	3 cut(s)	494, 1083, 1241
FatI	CATG	9 cut(s)	424, 441, 737, 844, 913, 1140, 1150, 1271, 1300
FauI	CCCGC	2 cut(s)	200, 372
FauNDI	CATATG	1 cut(s)	1171
FbaI	TGATCA	1 cut(s)	910
Fnu4HI	GCNGC	3 cut(s)	260, 708, 1138
FokI	GGATG	1 cut(s)	479
FriOI	GRGCYC	3 cut(s)	252, 413, 1279
Fsp4HI	GCNGC	3 cut(s)	260, 708, 1138
GlaI	GCGC	1 cut(s)	106
GluI	GCNGC	3 cut(s)	260, 708, 1138
GsaI	CCCAGC	1 cut(s)	408
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	6 cut(s)	120, 150, 268, 624, 685, 702
HapII	CCGG	6 cut(s)	66, 102, 171, 265, 344, 356
HgaI	GACGC	2 cut(s)	214, 370
HhaI	GCGC	1 cut(s)	107
Hin1I	GRCGYC	1 cut(s)	362
Hin1II	CATG	9 cut(s)	428, 445, 741, 848, 917, 1144, 1154, 1275, 1304
Hin6I	GCGC	1 cut(s)	105
HinP1I	GCGC	1 cut(s)	105
HinfI	GANTC	8 cut(s)	29, 302, 325, 352, 1071, 1144, 1244, 1283
HpaII	CCGG	6 cut(s)	66, 102, 171, 265, 344, 356
HphI	GGTGA	3 cut(s)	175, 581, 929
Hpy166II	GTNNAC	2 cut(s)	390, 447
Hpy188I	TCNGA	7 cut(s)	28, 49, 91, 324, 876, 1028, 1325
Hpy8I	GTNNAC	2 cut(s)	390, 447
HpyAV	CCTTC	6 cut(s)	190, 262, 516, 636, 933, 1300
HpyCH4III	ACNGT	4 cut(s)	394, 901, 937, 1082
HpyCH4V	TGCA	6 cut(s)	483, 605, 806, 971, 1124, 1140
HpyF10VI	GCNNNNNNNGC	4 cut(s)	147, 256, 265, 1134
HpyF3I	CTNAG	6 cut(s)	25, 327, 332, 645, 1014, 1328
Hsp92I	GRCGYC	1 cut(s)	362
Hsp92II	CATG	9 cut(s)	428, 445, 741, 848, 917, 1144, 1154, 1275, 1304
HspAI	GCGC	1 cut(s)	105
Kpn2I	TCCGGA	1 cut(s)	355
Ksp22I	TGATCA	1 cut(s)	910
LmnI	GCTCC	7 cut(s)	267, 317, 401, 408, 692, 715, 862
Lsp1109I	GCAGC	2 cut(s)	694, 1124
LweI	GCATC	1 cut(s)	1348
MabI	ACCWGGT	1 cut(s)	961
MaeIII	GTNAC	1 cut(s)	238
MbiI	CCGCTC	1 cut(s)	262
MboII	GAAGA	4 cut(s)	561, 605, 1103, 1177
MflI	RGATCY	1 cut(s)	610
MhlI	GDGCHC	3 cut(s)	252, 413, 1279
MluCI	AATT	6 cut(s)	515, 782, 850, 1048, 1061, 1263
MlyI	GAGTC	5 cut(s)	296, 319, 1065, 1138, 1292
MmeI	TCCRAC	4 cut(s)	72, 330, 347, 1051
MroI	TCCGGA	1 cut(s)	355
MseI	TTAA	1 cut(s)	828
MspA1I	CMGCKG	1 cut(s)	331
MspI	CCGG	6 cut(s)	66, 102, 171, 265, 344, 356
MspR9I	CCNGG	6 cut(s)	102, 214, 567, 762, 963, 1116
MvaI	CCWGG	5 cut(s)	214, 567, 762, 963, 1116
MvnI	CGCG	2 cut(s)	225, 1191
MwoI	GCNNNNNNNGC	4 cut(s)	147, 256, 265, 1134
NciI	CCSGG	1 cut(s)	102
NcoI	CCATGG	1 cut(s)	424
NdeI	CATATG	1 cut(s)	1171
NlaIII	CATG	9 cut(s)	428, 445, 741, 848, 917, 1144, 1154, 1275, 1304
NlaIV	GGNNCC	2 cut(s)	175, 658
NmeAIII	GCCGAG	2 cut(s)	96, 184
NmuCI	GTSAC	1 cut(s)	238
NspI	RCATGY	1 cut(s)	445
NspV	TTCGAA	1 cut(s)	1242
PagI	TCATGA	1 cut(s)	1300
PciI	ACATGT	1 cut(s)	441
PcsI	WCGNNNNNNNCGW	1 cut(s)	282
PfeI	GAWTC	3 cut(s)	29, 352, 1244
PflMI	CCANNNNNTGG	1 cut(s)	738
PkrI	GCNGC	3 cut(s)	261, 709, 1139
PleI	GAGTC	5 cut(s)	296, 319, 1065, 1138, 1291
PpsI	GAGTC	5 cut(s)	296, 319, 1065, 1138, 1291
PscI	ACATGT	1 cut(s)	441
Psp124BI	GAGCTC	1 cut(s)	413
Psp6I	CCWGG	5 cut(s)	212, 565, 760, 961, 1114
PspFI	CCCAGC	1 cut(s)	404
PspGI	CCWGG	5 cut(s)	212, 565, 760, 961, 1114
PspN4I	GGNNCC	2 cut(s)	175, 658
PspPI	GGNCC	5 cut(s)	267, 623, 683, 1154, 1205
PsuI	RGATCY	1 cut(s)	610
PvuII	CAGCTG	1 cut(s)	331
RsaI	GTAC	2 cut(s)	389, 446
RsaNI	GTAC	2 cut(s)	388, 445
SacI	GAGCTC	1 cut(s)	413
SaqAI	TTAA	1 cut(s)	828
SatI	GCNGC	3 cut(s)	260, 708, 1138
Sau96I	GGNCC	5 cut(s)	267, 623, 683, 1154, 1205
SchI	GAGTC	5 cut(s)	296, 319, 1065, 1138, 1292
ScrFI	CCNGG	6 cut(s)	102, 214, 567, 762, 963, 1116
SduI	GDGCHC	3 cut(s)	252, 413, 1279
SexAI	ACCWGGT	1 cut(s)	961
SfaNI	GCATC	1 cut(s)	1348
SfcI	CTRYAG	1 cut(s)	537
SfuI	TTCGAA	1 cut(s)	1242
SinI	GGWCC	2 cut(s)	1154, 1205
SmlI	CTYRAG	2 cut(s)	588, 1280
SmoI	CTYRAG	2 cut(s)	588, 1280
Sse9I	AATT	6 cut(s)	515, 782, 850, 1048, 1061, 1263
SsiI	CCGC	8 cut(s)	193, 208, 223, 260, 379, 399, 421, 1191
SstI	GAGCTC	1 cut(s)	413
StyD4I	CCNGG	6 cut(s)	100, 212, 565, 760, 961, 1114
StyI	CCWWGG	2 cut(s)	424, 713
TaaI	ACNGT	4 cut(s)	394, 901, 937, 1082
TaqI	TCGA	4 cut(s)	348, 461, 1000, 1242
TaqII	GACCGA	1 cut(s)	383
TasI	AATT	6 cut(s)	515, 782, 850, 1048, 1061, 1263
TatI	WGTACW	2 cut(s)	387, 444
TauI	GCSGC	1 cut(s)	262
TfiI	GAWTC	3 cut(s)	29, 352, 1244
Tru1I	TTAA	1 cut(s)	828
Tru9I	TTAA	1 cut(s)	828
TscAI	CASTG	2 cut(s)	454, 1319
TseFI	GTSAC	1 cut(s)	238
TseI	GCWGC	2 cut(s)	707, 1137
Tsp45I	GTSAC	1 cut(s)	238
TspDTI	ATGAA	1 cut(s)	1282
TspGWI	ACGGA	1 cut(s)	226
TspRI	CASTG	2 cut(s)	454, 1319
Van91I	CCANNNNNTGG	1 cut(s)	738
VpaK11BI	GGWCC	2 cut(s)	1154, 1205
XagI	CCTNNNNNAGG	1 cut(s)	630
XapI	RAATTY	3 cut(s)	782, 1061, 1263
XceI	RCATGY	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.