RchiOBHm_Chr4g0402331

Cell division control protein 48 homolog C-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0009020
Physical Location & Seq
Reverse (-)
20856410 .. 20860441
4032 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1983 bp
ATGGCCAAACAACCGCGTATCAGAAGCATAGAACAAGAAGAAGAAGAAGAAATTGGTCAAGGAATTTTCCACAAAAGGCGTCGGCTGAACTATGCTGCCAGTGAGAGCGAGGAGGATTCGGGCGAGGAGGATTCAGGCGAGGACGATTCGGGCAAGGAGGATCCGGGCTTGGCCGTCTGCTGCTTGGAGTACGCCATACCCAACATACCCAACAACAAGTTGAGTCCTTTTGGTTTTAGTCCGAGAGTTGTTCAGTTGAATTCGGGGATTGGAGGGGATGTGAGGTTCAGTGACCTAGGTGGGATGGAGAAAGCGCAAAACGAGCTGGAGAGGTTTGTGATGTTGCCATTTCGACATCCGGAGCTGGCGATATCGCTTGGAGTGAAGCCAGTATCTGGGGTTCTCTTGCACGGACCACCAGGTTGTGGGAAGACCAAATTGGCCCACGCCATTGCCAATGAACTCGGCATTCCTTTTTATAAGATTTCCGCTACCCAGCTCGTCTCTAGTGTGACAGGTTCATCCGAAGAGAATATACGAGACCTTTTTTCCAAAGCTTACAGAACGGCCCCTTCAATTGTATTTATTGACGAAATTGATGCAATTGCTACAAAAAGAGAGGATGTGCAACGTGCAATGGAGGGGCGGATCGTGACACAACTCATGACTTCCATGGATGAATCTCACAGACCTACTGTATTACCAGCTGCTCATGATGATCCAAATTCCAACTCGCAATCTTCGGATCAAAAATATCCCCATGTTCTCGTCATTGGAGCTACCAATAGGCCTGATGTTATTGACTCTGCTCTAAGGAGGCCTGGACGCTTTGAACTTGAGATTTTTTTAGGCCCTCCAGATGAAAGTGCGAGGCTCCAGATTCTCTCTTTGCTCACTCGCAATCTCGCATTACAAAGTGGTTCCTTTGATCTTCTCAAAATAGCCAGGTCTACCTCCGGGTTTGTCGGAGCTGATTTGACCTCCTTGGTCAACAGGGCTGGTTCCATTGCACTGGAAAGGATCGTAAACAACATGGTTGCTGCTGATGTCTCCATTCGTTCTGCGTCTCCCAAGTGCAATCAAGATTCTGGGCCTCAAGTACTCACTATGGCTGATTTTGAGGACGCAGTTAAAGCAGTCCAACCCTCCTTAAAAAGAGAAGGATTCGCTGCAATACCTAGTGTGAAATGGGAAGACGTTGGCGGTCTAGATTCTTTAAGGGAGGAACTGTACCGTTCCATAGTTAGGCGTATTAGACATCCAGACATCTATAAGAATTTCGGATTAGATTTAGAGACGGGATTTTTGCTCTACGGGCCTCCAGGATGTGGCAAAACCCTGATTGCAAAGGCTGTTGCAAGTGAGGCAGGAGCTAATTTTATATACGTCAAGGGTGCTGAACTTCTAAATAAATATGTTGGAGAAAGTGAACTGGCAGTCCGAACCTTGTTTAGCCGTGCAAGGACGTGCTCGCCATGCATTATTTTCTTTGATGAGGTTGATGCTTTGACAACAAAGCGGGGCAGACAAGGGGGATGGGTTGTTGAGCGGCTACTGAACCAGTTACTTGCAGAGTTAGATGGTGGAGATCAGCAACAGGGTGTATTTGTTATTGGTGCTACCAATAGACCTGATGCGATGGATCCTGCTGTTTTACGGCCGGGCAGGTTTGGTAAACATATTTATGTCTCACTGCCGAGTAGAGATGAGCGCTGTTTGATCCTAAAAGCTCTTGCAAGGAAGAAGCCTATAGATCCCAGTGTAGATCTCAATGAGATCGGTCGATGGAAGGCTCTTGAAAATTTTAGTGGAGCTGATCTCTCTGCAATGATGAACGAAGCTGCTATGGCTGCTCTTGAAGAGGGATCAACATCAACTGATGTGAGTGTGGGTTCATATACACAGACTATTAAGAAGTGTCACCTTGAACAATCCGTTGCTAAAATCACACCATCTGTAACTAATAAGGTAGCATCTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

660

Amino Acids

71.88

Weight (kDa)

5.55

Isoelectric Point (pI)

48.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 131 - 218 1.1e-07 Holliday junction DNA helicase RuvB P-loop domain
TIP49 PF06068 133 - 184 9.9e-06 TIP49 P-loop domain
AAA PF00004 134 - 284 2.3e-40 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 309 - 345 6.7e-10 AAA+ lid domain
AAA PF00004 436 - 564 2.5e-43 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 587 - 625 1.6e-08 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 480
Acc36I ACCTGC 1 cut(s) 1656
AccB7I CCANNNNNTGG 3 cut(s) 395, 425, 1328
AccBSI CCGCTC 1 cut(s) 1549
AccI GTMKAC 1 cut(s) 950
AccII CGCG 1 cut(s) 16
AccIII TCCGGA 1 cut(s) 358
AciI CCGC 6 cut(s) 14, 489, 646, 1203, 1519, 1549
AcoI YGGCCR 3 cut(s) 3, 171, 1658
AcsI RAATTY 5 cut(s) 63, 259, 724, 1276, 1801
AcyI GRCGYC 1 cut(s) 79
AfaI GTAC 3 cut(s) 191, 1101, 1232
AfeI AGCGCT 1 cut(s) 1712
AfiI CCNNNNNNNGG 4 cut(s) 395, 425, 1245, 1328
AgsI TTSAA 6 cut(s) 259, 576, 833, 1799, 1859, 1928
AjiI CACGTC 1 cut(s) 1467
AjnI CCWGG 4 cut(s) 418, 820, 944, 1321
AjuI GAANNNNNNNTTGG 4 cut(s) 36, 68, 422, 454
AloI GAACNNNNNNTCC 4 cut(s) 269, 301, 1422, 1454
Alw21I GWGCWC 1 cut(s) 1472
Alw26I GTCTC 6 cut(s) 508, 534, 1054, 1071, 1289, 1693
AlwNI CAGNNNCTG 1 cut(s) 395
Aor13HI TCCGGA 1 cut(s) 358
Aor51HI AGCGCT 1 cut(s) 1712
ApeKI GCWGC 7 cut(s) 95, 180, 707, 1040, 1169, 1841, 1850
ApoI RAATTY 5 cut(s) 63, 259, 724, 1276, 1801
ArsI GACNNNNNNTTYG 2 cut(s) 1288, 1320
AspA2I CCTAGG 1 cut(s) 295
AspLEI GCGC 2 cut(s) 316, 1713
AspS9I GGNCC 6 cut(s) 413, 442, 568, 851, 1091, 1316
AsuC2I CCSGG 3 cut(s) 165, 958, 1662
AsuHPI GGTGA 1 cut(s) 1913
AvaII GGWCC 1 cut(s) 413
AvrII CCTAGG 1 cut(s) 295
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 2 cut(s) 160, 1642
BarI GAAGNNNNNNTAC 2 cut(s) 519, 551
BbsI GAAGAC 2 cut(s) 437, 1200
Bbv12I GWGCWC 1 cut(s) 1472
BbvI GCAGC 7 cut(s) 82, 167, 694, 1027, 1156, 1828, 1837
BccI CCATC 6 cut(s) 298, 1530, 1574, 1633, 1779, 1960
BceAI ACGGC 4 cut(s) 158, 582, 1440, 1673
BcgI CGANNNNNNTGC 2 cut(s) 581, 615
BciT130I CCWGG 4 cut(s) 420, 822, 946, 1323
BcnI CCSGG 3 cut(s) 165, 958, 1662
BcoDI GTCTC 6 cut(s) 508, 534, 1054, 1071, 1289, 1693
BfaI CTAG 4 cut(s) 296, 507, 1179, 1208
BfmI CTRYAG 1 cut(s) 1749
BfoI RGCGCY 1 cut(s) 1714
BfuAI ACCTGC 1 cut(s) 1656
BglII AGATCT 1 cut(s) 1765
BisI GCNGC 8 cut(s) 96, 181, 708, 1041, 1170, 1550, 1842, 1851
BlnI CCTAGG 1 cut(s) 295
BlsI GCNGC 8 cut(s) 97, 182, 709, 1042, 1171, 1551, 1843, 1852
BmcAI AGTACT 1 cut(s) 1101
Bme1390I CCNGG 7 cut(s) 165, 420, 822, 946, 958, 1323, 1662
Bme18I GGWCC 1 cut(s) 413
BmgBI CACGTC 1 cut(s) 1467
BmgT120I GGNCC 6 cut(s) 413, 442, 568, 851, 1091, 1316
BmiI GGNNCC 6 cut(s) 162, 570, 875, 922, 1003, 1644
BmrFI CCNGG 7 cut(s) 165, 420, 822, 946, 958, 1323, 1662
BmrI ACTGGG 1 cut(s) 1752
BmsI GCATC 3 cut(s) 589, 1492, 1624
BmuI ACTGGG 1 cut(s) 1752
BpiI GAAGAC 2 cut(s) 437, 1200
BplI GAGNNNNNCTC 2 cut(s) 1803, 1835
BpmI CTGGAG 4 cut(s) 347, 840, 860, 1305
BpuEI CTTGAG 2 cut(s) 857, 1080
BpuMI CCSGG 3 cut(s) 165, 958, 1662
BsaBI GATNNNNATC 1 cut(s) 1870
BsaHI GRCGYC 1 cut(s) 79
BsaI GGTCTC 1 cut(s) 534
BsaJI CCNNGG 3 cut(s) 295, 672, 984
BsaWI WCCGGW 1 cut(s) 358
BsaXI ACNNNNNCTCC 4 cut(s) 264, 294, 1214, 1244
Bsc4I CCNNNNNNNGG 4 cut(s) 395, 425, 1245, 1328
Bse1I ACTGG 6 cut(s) 99, 389, 1017, 1437, 1561, 1758
Bse3DI GCAATG 4 cut(s) 450, 642, 1005, 1833
Bse8I GATNNNNATC 1 cut(s) 1870
BseAI TCCGGA 1 cut(s) 358
BseBI CCWGG 4 cut(s) 420, 822, 946, 1323
BseDI CCNNGG 3 cut(s) 295, 672, 984
BseGI GGATG 9 cut(s) 283, 309, 355, 521, 628, 682, 1258, 1331, 1541
BseJI GATNNNNATC 1 cut(s) 1870
BseLI CCNNNNNNNGG 4 cut(s) 395, 425, 1245, 1328
BseMI GCAATG 4 cut(s) 450, 642, 1005, 1833
BseNI ACTGG 6 cut(s) 99, 389, 1017, 1437, 1561, 1758
BseRI GAGGAG 2 cut(s) 125, 140
BseX3I CGGCCG 1 cut(s) 1658
BseXI GCAGC 7 cut(s) 82, 167, 694, 1027, 1156, 1828, 1837
BseYI CCCAGC 1 cut(s) 495
Bsh1236I CGCG 1 cut(s) 16
Bsh1285I CGRYCG 2 cut(s) 1661, 1783
BsiEI CGRYCG 2 cut(s) 1661, 1783
BsiHKAI GWGCWC 1 cut(s) 1472
BsiSI CCGG 4 cut(s) 164, 359, 957, 1661
BslI CCNNNNNNNGG 4 cut(s) 395, 425, 1245, 1328
BsmAI GTCTC 6 cut(s) 508, 534, 1054, 1071, 1289, 1693
BsmBI CGTCTC 3 cut(s) 508, 1071, 1289
BsmI GAATGC 1 cut(s) 468
Bso31I GGTCTC 1 cut(s) 534
Bsp1286I GDGCHC 1 cut(s) 1472
Bsp13I TCCGGA 1 cut(s) 358
Bsp19I CCATGG 1 cut(s) 672
BspACI CCGC 6 cut(s) 14, 489, 646, 1203, 1519, 1549
BspEI TCCGGA 1 cut(s) 358
BspFNI CGCG 1 cut(s) 16
BspHI TCATGA 2 cut(s) 663, 712
BspLI GGNNCC 6 cut(s) 162, 570, 875, 922, 1003, 1644
BspMI ACCTGC 1 cut(s) 1656
BspTNI GGTCTC 1 cut(s) 534
BsrBI CCGCTC 1 cut(s) 1549
BsrDI GCAATG 4 cut(s) 450, 642, 1005, 1833
BsrI ACTGG 6 cut(s) 99, 389, 1017, 1437, 1561, 1758
BssECI CCNNGG 3 cut(s) 295, 672, 984
BssNI GRCGYC 1 cut(s) 79
BssT1I CCWWGG 3 cut(s) 295, 672, 984
Bst2UI CCWGG 4 cut(s) 420, 822, 946, 1323
Bst4CI ACNGT 3 cut(s) 697, 1230, 1235
Bst6I CTCTTC 2 cut(s) 522, 1854
BstACI GRCGYC 1 cut(s) 79
BstC8I GCNNGC 2 cut(s) 366, 1472
BstDEI CTNAG 1 cut(s) 812
BstDSI CCRYGG 1 cut(s) 672
BstF5I GGATG 9 cut(s) 283, 309, 355, 521, 628, 682, 1258, 1331, 1541
BstFNI CGCG 1 cut(s) 16
BstH2I RGCGCY 1 cut(s) 1714
BstHHI GCGC 2 cut(s) 316, 1713
BstMAI GTCTC 6 cut(s) 508, 534, 1054, 1071, 1289, 1693
BstMCI CGRYCG 2 cut(s) 1661, 1783
BstMWI GCNNNNNNNGC 7 cut(s) 322, 1133, 1315, 1364, 1476, 1847, 1850
BstNI CCWGG 4 cut(s) 420, 822, 946, 1323
BstSCI CCNGG 7 cut(s) 163, 418, 820, 944, 956, 1321, 1660
BstSFI CTRYAG 1 cut(s) 1749
BstUI CGCG 1 cut(s) 16
BstV1I GCAGC 7 cut(s) 82, 167, 694, 1027, 1156, 1828, 1837
BstV2I GAAGAC 2 cut(s) 437, 1200
BstX2I RGATCY 4 cut(s) 160, 1642, 1753, 1765
BstXI CCANNNNNNTGG 1 cut(s) 1012
BstYI RGATCY 4 cut(s) 160, 1642, 1753, 1765
BstZI CGGCCG 1 cut(s) 1658
BtgI CCRYGG 1 cut(s) 672
BtgZI GCGATG 1 cut(s) 1652
BtrI CACGTC 1 cut(s) 1467
BtsCI GGATG 9 cut(s) 283, 309, 355, 521, 628, 682, 1258, 1331, 1541
BtsI GCAGTG 1 cut(s) 1691
BtsIMutI CAGTG 5 cut(s) 106, 295, 1010, 1691, 1765
BveI ACCTGC 1 cut(s) 1656
Cac8I GCNNGC 2 cut(s) 366, 1472
CaiI CAGNNNCTG 1 cut(s) 395
CciI TCATGA 2 cut(s) 663, 712
CfoI GCGC 2 cut(s) 316, 1713
Cfr13I GGNCC 6 cut(s) 413, 442, 568, 851, 1091, 1316
CseI GACGC 4 cut(s) 68, 834, 1053, 1133
CsiI ACCWGGT 1 cut(s) 418
Csp6I GTAC 3 cut(s) 190, 1100, 1231
CviAII CATG 6 cut(s) 664, 673, 713, 761, 1033, 1476
CviQI GTAC 3 cut(s) 190, 1100, 1231
DdeI CTNAG 1 cut(s) 812
EaeI YGGCCR 3 cut(s) 3, 171, 1658
EagI CGGCCG 1 cut(s) 1658
Eam1104I CTCTTC 2 cut(s) 522, 1854
EarI CTCTTC 2 cut(s) 522, 1854
EciI GGCGGA 1 cut(s) 661
EclXI CGGCCG 1 cut(s) 1658
Eco130I CCWWGG 3 cut(s) 295, 672, 984
Eco147I AGGCCT 2 cut(s) 790, 820
Eco31I GGTCTC 1 cut(s) 534
Eco32I GATATC 1 cut(s) 372
Eco47I GGWCC 1 cut(s) 413
Eco47III AGCGCT 1 cut(s) 1712
Eco52I CGGCCG 1 cut(s) 1658
EcoO109I RGGNCCY 1 cut(s) 851
EcoRI GAATTC 1 cut(s) 259
EcoRII CCWGG 4 cut(s) 418, 820, 944, 1321
EcoRV GATATC 1 cut(s) 372
EcoT14I CCWWGG 3 cut(s) 295, 672, 984
EcoT22I ATGCAT 1 cut(s) 1481
ErhI CCWWGG 3 cut(s) 295, 672, 984
Esp3I CGTCTC 3 cut(s) 508, 1071, 1289
FaeI CATG 6 cut(s) 667, 676, 716, 764, 1036, 1479
FatI CATG 6 cut(s) 663, 672, 712, 760, 1032, 1475
FauI CCCGC 1 cut(s) 1512
FblI GTMKAC 1 cut(s) 950
Fnu4HI GCNGC 8 cut(s) 96, 181, 708, 1041, 1170, 1550, 1842, 1851
FokI GGATG 9 cut(s) 290, 316, 342, 508, 635, 689, 1245, 1338, 1548
Fsp4HI GCNGC 8 cut(s) 96, 181, 708, 1041, 1170, 1550, 1842, 1851
FspBI CTAG 4 cut(s) 296, 507, 1179, 1208
GlaI GCGC 2 cut(s) 315, 1712
GluI GCNGC 8 cut(s) 96, 181, 708, 1041, 1170, 1550, 1842, 1851
GsaI CCCAGC 1 cut(s) 499
GsuI CTGGAG 4 cut(s) 347, 840, 860, 1305
HaeII RGCGCY 1 cut(s) 1714
HapII CCGG 4 cut(s) 164, 359, 957, 1661
HgaI GACGC 4 cut(s) 68, 834, 1053, 1133
HhaI GCGC 2 cut(s) 316, 1713
Hin1I GRCGYC 1 cut(s) 79
Hin1II CATG 6 cut(s) 667, 676, 716, 764, 1036, 1479
Hin6I GCGC 2 cut(s) 314, 1711
HinP1I GCGC 2 cut(s) 314, 1711
HincII GTYRAC 1 cut(s) 991
HindII GTYRAC 1 cut(s) 991
HindIII AAGCTT 1 cut(s) 555
HpaII CCGG 4 cut(s) 164, 359, 957, 1661
HphI GGTGA 1 cut(s) 1913
Hpy166II GTNNAC 5 cut(s) 951, 991, 1027, 1430, 1676
Hpy188I TCNGA 7 cut(s) 23, 243, 526, 745, 968, 1283, 1442
Hpy8I GTNNAC 5 cut(s) 951, 991, 1027, 1430, 1676
Hpy99I CGWCG 1 cut(s) 84
HpyAV CCTTC 3 cut(s) 582, 1154, 1783
HpyCH4III ACNGT 3 cut(s) 697, 1230, 1235
HpyCH4IV ACGT 4 cut(s) 631, 1197, 1386, 1466
HpyF10VI GCNNNNNNNGC 7 cut(s) 322, 1133, 1315, 1364, 1476, 1847, 1850
HpyF3I CTNAG 1 cut(s) 812
HpySE526I ACGT 4 cut(s) 631, 1197, 1386, 1466
Hsp92I GRCGYC 1 cut(s) 79
Hsp92II CATG 6 cut(s) 667, 676, 716, 764, 1036, 1479
HspAI GCGC 2 cut(s) 314, 1711
Kpn2I TCCGGA 1 cut(s) 358
LmnI GCTCC 6 cut(s) 361, 776, 879, 968, 1370, 1811
Lsp1109I GCAGC 7 cut(s) 82, 167, 694, 1027, 1156, 1828, 1837
LweI GCATC 3 cut(s) 589, 1492, 1624
MabI ACCWGGT 1 cut(s) 418
MaeI CTAG 4 cut(s) 296, 507, 1179, 1208
MaeII ACGT 4 cut(s) 631, 1197, 1386, 1466
MaeIII GTNAC 6 cut(s) 290, 511, 652, 1563, 1919, 1957
MbiI CCGCTC 1 cut(s) 1549
MfeI CAATTG 2 cut(s) 576, 603
MflI RGATCY 4 cut(s) 160, 1642, 1753, 1765
MhlI GDGCHC 1 cut(s) 1472
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 232, 797
MmeI TCCRAC 4 cut(s) 753, 946, 1165, 1399
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 1481
MroI TCCGGA 1 cut(s) 358
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 1131, 1151, 1217, 1911
MslI CAYNNNNRTG 1 cut(s) 1683
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 707
MspI CCGG 4 cut(s) 164, 359, 957, 1661
MspR9I CCNGG 7 cut(s) 165, 420, 822, 946, 958, 1323, 1662
MunI CAATTG 2 cut(s) 576, 603
Mva1269I GAATGC 1 cut(s) 468
MvaI CCWGG 4 cut(s) 420, 822, 946, 1323
MvnI CGCG 1 cut(s) 16
MwoI GCNNNNNNNGC 7 cut(s) 322, 1133, 1315, 1364, 1476, 1847, 1850
NciI CCSGG 3 cut(s) 165, 958, 1662
NcoI CCATGG 1 cut(s) 672
NlaIII CATG 6 cut(s) 667, 676, 716, 764, 1036, 1479
NlaIV GGNNCC 6 cut(s) 162, 570, 875, 922, 1003, 1644
NmeAIII GCCGAG 2 cut(s) 444, 1722
NmuCI GTSAC 4 cut(s) 290, 511, 652, 1919
NsiI ATGCAT 1 cut(s) 1481
PagI TCATGA 2 cut(s) 663, 712
PceI AGGCCT 2 cut(s) 790, 820
PctI GAATGC 1 cut(s) 468
PfeI GAWTC 8 cut(s) 116, 131, 146, 680, 880, 1085, 1164, 1211
PflMI CCANNNNNTGG 3 cut(s) 395, 425, 1328
PfoI TCCNGGA 1 cut(s) 1321
PkrI GCNGC 8 cut(s) 97, 182, 709, 1042, 1171, 1551, 1843, 1852
PleI GAGTC 2 cut(s) 231, 797
PpsI GAGTC 2 cut(s) 231, 797
PsiI TTATAA 1 cut(s) 480
Psp6I CCWGG 4 cut(s) 418, 820, 944, 1321
PspFI CCCAGC 1 cut(s) 495
PspGI CCWGG 4 cut(s) 418, 820, 944, 1321
PspN4I GGNNCC 6 cut(s) 162, 570, 875, 922, 1003, 1644
PspPI GGNCC 6 cut(s) 413, 442, 568, 851, 1091, 1316
PsrI GAACNNNNNNTAC 2 cut(s) 384, 416
PstNI CAGNNNCTG 1 cut(s) 395
PsuI RGATCY 4 cut(s) 160, 1642, 1753, 1765
PvuII CAGCTG 1 cut(s) 707
RsaI GTAC 3 cut(s) 191, 1101, 1232
RsaNI GTAC 3 cut(s) 190, 1100, 1231
RseI CAYNNNNRTG 1 cut(s) 1683
SaqAI TTAA 4 cut(s) 1131, 1151, 1217, 1911
SatI GCNGC 8 cut(s) 96, 181, 708, 1041, 1170, 1550, 1842, 1851
Sau96I GGNCC 6 cut(s) 413, 442, 568, 851, 1091, 1316
ScaI AGTACT 1 cut(s) 1101
SchI GAGTC 2 cut(s) 232, 797
ScrFI CCNGG 7 cut(s) 165, 420, 822, 946, 958, 1323, 1662
SduI GDGCHC 1 cut(s) 1472
SexAI ACCWGGT 1 cut(s) 418
SfaNI GCATC 3 cut(s) 589, 1492, 1624
SfcI CTRYAG 1 cut(s) 1749
SinI GGWCC 1 cut(s) 413
SmiMI CAYNNNNRTG 1 cut(s) 1683
SmlI CTYRAG 2 cut(s) 836, 1095
SmoI CTYRAG 2 cut(s) 836, 1095
SseBI AGGCCT 2 cut(s) 790, 820
SsiI CCGC 6 cut(s) 14, 489, 646, 1203, 1519, 1549
SspMI CTAG 4 cut(s) 296, 507, 1179, 1208
StuI AGGCCT 2 cut(s) 790, 820
StyD4I CCNGG 7 cut(s) 163, 418, 820, 944, 956, 1321, 1660
StyI CCWWGG 3 cut(s) 295, 672, 984
TaaI ACNGT 3 cut(s) 697, 1230, 1235
TaiI ACGT 4 cut(s) 634, 1200, 1389, 1469
TaqI TCGA 2 cut(s) 352, 1783
TaqII GACCGA 1 cut(s) 1769
TatI WGTACW 1 cut(s) 1099
TauI GCSGC 1 cut(s) 1552
TfiI GAWTC 8 cut(s) 116, 131, 146, 680, 880, 1085, 1164, 1211
Tru1I TTAA 4 cut(s) 1131, 1151, 1217, 1911
Tru9I TTAA 4 cut(s) 1131, 1151, 1217, 1911
TscAI CASTG 5 cut(s) 106, 295, 1017, 1698, 1765
TseFI GTSAC 4 cut(s) 290, 511, 652, 1919
TseI GCWGC 7 cut(s) 95, 180, 707, 1040, 1169, 1841, 1850
Tsp45I GTSAC 4 cut(s) 290, 511, 652, 1919
TspDTI ATGAA 6 cut(s) 474, 510, 693, 876, 1847, 1884
TspGWI ACGGA 2 cut(s) 426, 1924
TspRI CASTG 5 cut(s) 106, 295, 1017, 1698, 1765
Van91I CCANNNNNTGG 3 cut(s) 395, 425, 1328
VpaK11BI GGWCC 1 cut(s) 413
XapI RAATTY 5 cut(s) 63, 259, 724, 1276, 1801
XbaI TCTAGA 1 cut(s) 1207
XmaJI CCTAGG 1 cut(s) 295
XmiI GTMKAC 1 cut(s) 950
XspI CTAG 4 cut(s) 296, 507, 1179, 1208
ZrmI AGTACT 1 cut(s) 1101
Zsp2I ATGCAT 1 cut(s) 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.