RchiOBHm_Chr4g0436731

O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
59968096 .. 59971768
3673 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 453 bp
ATGTGTATCTTCTTGTTGATCAGGGATTCAAAGAATAAAGCTGGTCAAGGAGGCCGTGGGGGTGGAAGTGGATATGGATATGGGCGAGGGCGTGGCGGTGGTAGATACAATTGTGATTCAGCCAATAATGAAAACAACAGTGGGTACAATCGTGAATCAGCCCCTGCTGGTCAGGGTGCTTTTAAGGATGCACCTCCTAAACGGCATTTCTCTGGTGGGGATGGTGATGGAAGGCCATTTGAAAGGCGTGGCTATGTAACTTACTTTATAATGAATCCTACAAGGCTTGCATTCATTTGCTCAACACTGTGCCGTCATTTCAGGAGGGATCCATTATCTGCTAGGCCCTTTGAAGGGCTCAAATTTATTGATGTTGGCTGTGGAGGTGGAATTCTTTCTGAGACAGTATCCATCACATTGACATTTCTATTGCCCTACAAGAGCATCCTTTAG

Protein Analysis

150

Amino Acids

16.26

Weight (kDa)

9.63

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019925)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 269
AciI CCGC 1 cut(s) 96
AclWI GGATC 2 cut(s) 323, 336
AcsI RAATTY 2 cut(s) 362, 390
AfaI GTAC 1 cut(s) 146
AfiI CCNNNNNNNGG 2 cut(s) 353, 354
AgsI TTSAA 3 cut(s) 30, 242, 353
AluBI AGCT 1 cut(s) 41
AluI AGCT 1 cut(s) 41
Alw26I GTCTC 1 cut(s) 395
AlwI GGATC 2 cut(s) 323, 336
AlwNI CAGNNNCTG 1 cut(s) 164
AoxI GGCC 3 cut(s) 52, 233, 344
ApoI RAATTY 2 cut(s) 362, 390
Asp700I GAANNNNTTC 1 cut(s) 394
AspS9I GGNCC 1 cut(s) 345
AsuHPI GGTGA 1 cut(s) 236
BaeI ACNNNNGTAYC 4 cut(s) 97, 130, 136, 169
BamHI GGATCC 1 cut(s) 328
BanII GRGCYC 1 cut(s) 360
BccI CCATC 3 cut(s) 215, 221, 419
BceAI ACGGC 3 cut(s) 39, 218, 297
BciVI GTATCC 1 cut(s) 418
BclI TGATCA 1 cut(s) 18
BcoDI GTCTC 1 cut(s) 395
BfaI CTAG 1 cut(s) 342
BfuI GTATCC 1 cut(s) 418
BmgT120I GGNCC 1 cut(s) 345
BmiI GGNNCC 1 cut(s) 330
BmsI GCATC 1 cut(s) 178
BsaJI CCNNGG 1 cut(s) 55
Bsc4I CCNNNNNNNGG 2 cut(s) 353, 354
BseDI CCNNGG 1 cut(s) 55
BseGI GGATG 3 cut(s) 193, 226, 444
BseLI CCNNNNNNNGG 2 cut(s) 353, 354
BseMII CTCAG 1 cut(s) 390
BshFI GGCC 3 cut(s) 54, 235, 346
BslI CCNNNNNNNGG 2 cut(s) 353, 354
BsmAI GTCTC 1 cut(s) 395
BsmI GAATGC 1 cut(s) 290
BsnI GGCC 3 cut(s) 54, 235, 346
Bsp1286I GDGCHC 1 cut(s) 360
Bsp143I GATC 2 cut(s) 18, 328
BspACI CCGC 1 cut(s) 96
BspANI GGCC 3 cut(s) 54, 235, 346
BspCNI CTCAG 1 cut(s) 391
BspLI GGNNCC 1 cut(s) 330
BspPI GGATC 2 cut(s) 323, 336
BssECI CCNNGG 1 cut(s) 55
BssMI GATC 2 cut(s) 18, 328
Bst4CI ACNGT 3 cut(s) 140, 309, 406
BstC8I GCNNGC 1 cut(s) 288
BstDEI CTNAG 1 cut(s) 399
BstDSI CCRYGG 1 cut(s) 55
BstF5I GGATG 3 cut(s) 193, 226, 444
BstKTI GATC 2 cut(s) 21, 331
BstMAI GTCTC 1 cut(s) 395
BstMBI GATC 2 cut(s) 18, 328
BstX2I RGATCY 1 cut(s) 328
BstYI RGATCY 1 cut(s) 328
BsuI GTATCC 1 cut(s) 418
BsuRI GGCC 3 cut(s) 54, 235, 346
BtgI CCRYGG 1 cut(s) 55
BtsCI GGATG 3 cut(s) 193, 226, 444
BtsIMutI CAGTG 2 cut(s) 145, 305
Cac8I GCNNGC 1 cut(s) 288
CaiI CAGNNNCTG 1 cut(s) 164
Cfr13I GGNCC 1 cut(s) 345
Csp6I GTAC 1 cut(s) 145
CviQI GTAC 1 cut(s) 145
DdeI CTNAG 1 cut(s) 399
DpnI GATC 2 cut(s) 20, 330
DpnII GATC 2 cut(s) 18, 328
Eco24I GRGCYC 1 cut(s) 360
EcoO109I RGGNCCY 1 cut(s) 345
EcoRI GAATTC 1 cut(s) 390
EcoT38I GRGCYC 1 cut(s) 360
FaiI YATR 4 cut(s) 75, 81, 255, 269
FbaI TGATCA 1 cut(s) 18
FokI GGATG 3 cut(s) 200, 233, 431
FriOI GRGCYC 1 cut(s) 360
FspBI CTAG 1 cut(s) 342
HaeIII GGCC 3 cut(s) 54, 235, 346
HinfI GANTC 4 cut(s) 26, 116, 155, 274
HphI GGTGA 1 cut(s) 236
Hpy188I TCNGA 1 cut(s) 400
Hpy188III TCNNGA 2 cut(s) 152, 322
HpyAV CCTTC 2 cut(s) 225, 347
HpyCH4III ACNGT 3 cut(s) 140, 309, 406
HpyCH4V TGCA 2 cut(s) 191, 290
HpyF3I CTNAG 1 cut(s) 399
Ksp22I TGATCA 1 cut(s) 18
Kzo9I GATC 2 cut(s) 18, 328
LpnPI CCDG 7 cut(s) 7, 27, 153, 158, 177, 198, 307
LweI GCATC 1 cut(s) 178
MaeI CTAG 1 cut(s) 342
MaeIII GTNAC 1 cut(s) 256
MalI GATC 2 cut(s) 20, 330
MboI GATC 2 cut(s) 18, 328
MfeI CAATTG 1 cut(s) 109
MflI RGATCY 1 cut(s) 328
MhlI GDGCHC 1 cut(s) 360
MluCI AATT 3 cut(s) 109, 362, 390
MnlI CCTC 5 cut(s) 44, 80, 204, 318, 377
MroXI GAANNNNTTC 1 cut(s) 394
MseI TTAA 1 cut(s) 183
MunI CAATTG 1 cut(s) 109
Mva1269I GAATGC 1 cut(s) 290
NdeII GATC 2 cut(s) 18, 328
NlaIV GGNNCC 1 cut(s) 330
PctI GAATGC 1 cut(s) 290
PdmI GAANNNNTTC 1 cut(s) 394
PfeI GAWTC 4 cut(s) 26, 116, 155, 274
PsiI TTATAA 1 cut(s) 269
PspN4I GGNNCC 1 cut(s) 330
PspPI GGNCC 1 cut(s) 345
PstNI CAGNNNCTG 1 cut(s) 164
PsuI RGATCY 1 cut(s) 328
RsaI GTAC 1 cut(s) 146
RsaNI GTAC 1 cut(s) 145
SaqAI TTAA 1 cut(s) 183
Sau3AI GATC 2 cut(s) 18, 328
Sau96I GGNCC 1 cut(s) 345
SduI GDGCHC 1 cut(s) 360
SetI ASST 3 cut(s) 43, 196, 388
SfaNI GCATC 1 cut(s) 178
Sse9I AATT 3 cut(s) 109, 362, 390
SsiI CCGC 1 cut(s) 96
SspMI CTAG 1 cut(s) 342
TaaI ACNGT 3 cut(s) 140, 309, 406
TasI AATT 3 cut(s) 109, 362, 390
TfiI GAWTC 4 cut(s) 26, 116, 155, 274
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TscAI CASTG 2 cut(s) 145, 312
TspDTI ATGAA 3 cut(s) 144, 283, 287
TspRI CASTG 2 cut(s) 145, 312
XapI RAATTY 2 cut(s) 362, 390
XmnI GAANNNNTTC 1 cut(s) 394
XspI CTAG 1 cut(s) 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.