RchiOBHm_Chr3g0490221

Belongs to the group II decarboxylase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0005605
Physical Location & Seq
Forward (+)
36908727 .. 36913647
4921 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1488 bp
ATGGTGCTCTCCAAAACCGCATCGCAGTCAGATGTCTCTGTCCACTCCACCTTCGCTTCGCGATACGTTCGAACTTCTCTTCCAAGGTTCAGAATGGGAGAGAACTCGATCCCGAAGGAGGCGGCTTATCAGATCATAAACGACGAGCTGATGCTGGACGGAAATCCACGGCTGAACCTGGCGTCGTTCGTGACGACGTGGATGGAGCCGGAATGCGATAAACTCATTATGTCCTCCATCAACAAGAACTACGTCGATATGGATGAGTACCCTAATCGGTGCGTGAACATGATAGCTCATCTATTCAATGCACCACTCGGAGAATCAGAGGCGGCCGTTGGAGTCGGCACAGTGGGATCTTCCGAGGCCATCATGTTGGCCGGATTGGCATTCAAGAGGAGGTGGCAGAACAAGAGGAGAGCTGAGGGGAAACCGGTCGACAAGCCCAACATTGTCACCGGAGCTAATGTTCAGGTGTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAGGAGGTGAAGTTGAGGGATGATTACTACGTAATGGACCCCGAGAAAGCTGTGGAGATGGTTGATGAGAACACCATCTGCGTTGCTGCTATCCTCGGTTCCACTCTTAATGGCGAGTTCGAAGACGTCAAGCGCTTGAATGATCTCCTGGTTGAGAAAAACCAGGAAACTGGATGGGATACTCCGATCCATGTAGACGCCGCGAGTGGTGGGTTCATTGCTCCGTTTTTATACCCAGAACTCGAGTGGGATTTCCGTTTGCCGCTGGTGAAGAGCATCAACGTGAGCGGGCACAAGTACGGACTTGTGTATGCCGGAATTGGGTGGGTCATTTGGAGGAACAAAGAGGACTTGCCTGAGGAGCTCATCTTCCATATCAACTACCTTGGAGCAGATCAACCTACCTTCACCCTCAATTTCTCTAAAGGATCCAGCCAAGTTATTGCTCAGTATTACCAACTAATTCGCTTGGGTTTTGAGGGATACAGGAACATCATGGAAAATTGTCGTGAAAATATGATTGTACTAAGAGAAGGACTCGAGAAGACAGGTCGCTTCAAGATCGTCTCCAAGGACGAGGGAGTACCTCTGGTGGCTTTTTCTCTCAAAGATAACCACTGCCACGATGAGTTTGAGATCTCTGATTTGTTGCGTCGCTACGGGTGGATTGTGCCAGCATACACTATGCCGGCAGATGCTCAGCATGTCACCGTGCTGCGTGTGGTCATCAGAGAAGACTTTTCTCACACTCTTGCTGAGCGCCTGGTCAATGACATCCAGAAAGTTCTGCATGAGCTCGACCACCTTCCATCAAAGCTCAGCTCCAACAGTTCCATTGAAAGCCAATCGGTTGAGAATAATGAGAAGTCCACCGTTACCACGAAGAAGAGTGCTTTGGAGACACAGAGGGAAATCACTACCATTTGGAGGAAGTTTGTTATGGAGAAGAAGAAGATAACCGGTGTTTGTTAG

Protein Analysis

495

Amino Acids

56.34

Weight (kDa)

5.62

Isoelectric Point (pI)

35.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyridoxal_deC PF00282 38 - 375 1.1e-98 Pyridoxal-dependent decarboxylase conserved domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 645
AccBSI CCGCTC 1 cut(s) 804
AccI GTMKAC 2 cut(s) 438, 711
AccII CGCG 2 cut(s) 61, 719
AciI CCGC 6 cut(s) 18, 122, 332, 717, 779, 804
AclWI GGATC 5 cut(s) 103, 364, 697, 939, 952
AcoI YGGCCR 2 cut(s) 333, 378
AcsI RAATTY 1 cut(s) 488
AcyI GRCGYC 3 cut(s) 182, 642, 714
AfaI GTAC 5 cut(s) 269, 500, 815, 1041, 1101
AfeI AGCGCT 1 cut(s) 650
AfiI CCNNNNNNNGG 3 cut(s) 118, 837, 1443
AgeI ACCGGT 2 cut(s) 433, 1475
AgsI TTSAA 6 cut(s) 307, 394, 517, 655, 1075, 1355
AjiI CACGTC 1 cut(s) 198
AjnI CCWGG 4 cut(s) 177, 663, 678, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 1394, 1426
AloI GAACNNNNNNTCC 4 cut(s) 64, 96, 453, 485
AluBI AGCT 9 cut(s) 148, 296, 422, 464, 566, 880, 1312, 1333, 1338
AluI AGCT 9 cut(s) 148, 296, 422, 464, 566, 880, 1312, 1333, 1338
Alw21I GWGCWC 3 cut(s) 9, 882, 1314
Alw26I GTCTC 3 cut(s) 40, 1087, 1409
AlwI GGATC 5 cut(s) 103, 364, 697, 939, 952
Ama87I CYCGRG 3 cut(s) 557, 758, 1055
Aor51HI AGCGCT 1 cut(s) 650
AoxI GGCC 3 cut(s) 333, 366, 378
ApeKI GCWGC 2 cut(s) 602, 1231
ApoI RAATTY 1 cut(s) 488
AsiGI ACCGGT 2 cut(s) 433, 1475
AspLEI GCGC 2 cut(s) 651, 1278
AspS9I GGNCC 1 cut(s) 553
AsuHPI GGTGA 5 cut(s) 448, 535, 796, 916, 1216
AsuII TTCGAA 2 cut(s) 70, 636
AvaI CYCGRG 3 cut(s) 557, 758, 1055
AvaII GGWCC 1 cut(s) 553
AxyI CCTNAGG 1 cut(s) 873
BaeGI GKGCMC 1 cut(s) 810
BamHI GGATCC 1 cut(s) 944
BanII GRGCYC 2 cut(s) 882, 1314
BbsI GAAGAC 3 cut(s) 645, 1067, 1257
Bbv12I GWGCWC 3 cut(s) 9, 882, 1314
BbvCI CCTCAGC 1 cut(s) 423
BbvI GCAGC 2 cut(s) 589, 1218
BccI CCATC 7 cut(s) 196, 245, 377, 568, 599, 684, 1333
BceAI ACGGC 2 cut(s) 185, 320
BciT130I CCWGG 4 cut(s) 179, 665, 680, 1280
BciVI GTATCC 2 cut(s) 688, 992
BcoDI GTCTC 3 cut(s) 40, 1087, 1409
BfoI RGCGCY 2 cut(s) 652, 1279
BfuI GTATCC 2 cut(s) 688, 992
BglI GCCNNNNNGGC 1 cut(s) 386
BglII AGATCT 1 cut(s) 1152
BisI GCNGC 6 cut(s) 123, 333, 603, 717, 779, 1232
BlpI GCTNAGC 3 cut(s) 1215, 1272, 1334
BlsI GCNGC 6 cut(s) 124, 334, 604, 718, 780, 1233
Bme1390I CCNGG 4 cut(s) 179, 665, 680, 1280
Bme18I GGWCC 1 cut(s) 553
BmeT110I CYCGRG 3 cut(s) 557, 758, 1055
BmgBI CACGTC 1 cut(s) 198
BmgT120I GGNCC 1 cut(s) 553
BmiI GGNNCC 4 cut(s) 207, 555, 616, 946
BmrFI CCNGG 4 cut(s) 179, 665, 680, 1280
BmsI GCATC 4 cut(s) 29, 141, 801, 1201
BpiI GAAGAC 3 cut(s) 645, 1067, 1257
BplI GAGNNNNNCTC 2 cut(s) 1038, 1070
Bpu10I CCTNAGC 1 cut(s) 423
Bpu1102I GCTNAGC 3 cut(s) 1215, 1272, 1334
Bpu14I TTCGAA 2 cut(s) 70, 636
BsaAI YACGTR 1 cut(s) 547
BsaHI GRCGYC 3 cut(s) 182, 642, 714
BsaJI CCNNGG 6 cut(s) 83, 167, 363, 610, 901, 1086
BsaWI WCCGGW 3 cut(s) 433, 458, 1475
BsaXI ACNNNNNCTCC 4 cut(s) 453, 483, 512, 542
Bsc4I CCNNNNNNNGG 3 cut(s) 118, 837, 1443
Bse118I RCCGGY 3 cut(s) 433, 1204, 1475
Bse1I ACTGG 1 cut(s) 691
Bse21I CCTNAGG 1 cut(s) 873
Bse3DI GCAATG 1 cut(s) 732
BseBI CCWGG 4 cut(s) 179, 665, 680, 1280
BseDI CCNNGG 6 cut(s) 83, 167, 363, 610, 901, 1086
BseGI GGATG 5 cut(s) 207, 268, 541, 695, 1290
BseLI CCNNNNNNNGG 3 cut(s) 118, 837, 1443
BseMI GCAATG 1 cut(s) 732
BseMII CTCAG 6 cut(s) 414, 864, 977, 1229, 1263, 1348
BseNI ACTGG 1 cut(s) 691
BseRI GAGGAG 3 cut(s) 412, 430, 890
BseSI GKGCMC 1 cut(s) 810
BseX3I CGGCCG 1 cut(s) 333
BseXI GCAGC 2 cut(s) 589, 1218
BseYI CCCAGC 1 cut(s) 480
Bsh1236I CGCG 2 cut(s) 61, 719
Bsh1285I CGRYCG 2 cut(s) 336, 438
BshFI GGCC 3 cut(s) 335, 368, 380
BshTI ACCGGT 2 cut(s) 433, 1475
BsiEI CGRYCG 2 cut(s) 336, 438
BsiHKAI GWGCWC 3 cut(s) 9, 882, 1314
BsiHKCI CYCGRG 3 cut(s) 557, 758, 1055
BsiSI CCGG 7 cut(s) 209, 381, 434, 459, 831, 1205, 1476
BslI CCNNNNNNNGG 3 cut(s) 118, 837, 1443
BsmAI GTCTC 3 cut(s) 40, 1087, 1409
BsmBI CGTCTC 1 cut(s) 1087
BsmI GAATGC 2 cut(s) 218, 389
BsnI GGCC 3 cut(s) 335, 368, 380
BsoBI CYCGRG 3 cut(s) 557, 758, 1055
Bsp119I TTCGAA 2 cut(s) 70, 636
Bsp1286I GDGCHC 4 cut(s) 9, 810, 882, 1314
Bsp143I GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
Bsp1720I GCTNAGC 3 cut(s) 1215, 1272, 1334
Bsp68I TCGCGA 1 cut(s) 61
BspACI CCGC 6 cut(s) 18, 122, 332, 717, 779, 804
BspANI GGCC 3 cut(s) 335, 368, 380
BspCNI CTCAG 6 cut(s) 415, 865, 976, 1228, 1264, 1347
BspFNI CGCG 2 cut(s) 61, 719
BspLI GGNNCC 4 cut(s) 207, 555, 616, 946
BspPI GGATC 5 cut(s) 103, 364, 697, 939, 952
BspQI GCTCTTC 1 cut(s) 782
BspT104I TTCGAA 2 cut(s) 70, 636
BsrBI CCGCTC 1 cut(s) 804
BsrDI GCAATG 1 cut(s) 732
BsrFI RCCGGY 3 cut(s) 433, 1204, 1475
BsrI ACTGG 1 cut(s) 691
BssAI RCCGGY 3 cut(s) 433, 1204, 1475
BssECI CCNNGG 6 cut(s) 83, 167, 363, 610, 901, 1086
BssMI GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
BssNI GRCGYC 3 cut(s) 182, 642, 714
BssT1I CCWWGG 3 cut(s) 83, 901, 1086
Bst2UI CCWGG 4 cut(s) 179, 665, 680, 1280
Bst4CI ACNGT 4 cut(s) 352, 1228, 1346, 1390
Bst6I CTCTTC 3 cut(s) 84, 782, 1397
BstACI GRCGYC 3 cut(s) 182, 642, 714
BstBAI YACGTR 1 cut(s) 547
BstBI TTCGAA 2 cut(s) 70, 636
BstC8I GCNNGC 3 cut(s) 806, 1191, 1206
BstDEI CTNAG 7 cut(s) 423, 873, 963, 1043, 1215, 1272, 1334
BstDSI CCRYGG 1 cut(s) 167
BstF5I GGATG 5 cut(s) 207, 268, 541, 695, 1290
BstFNI CGCG 2 cut(s) 61, 719
BstH2I RGCGCY 2 cut(s) 652, 1279
BstHHI GCGC 2 cut(s) 651, 1278
BstKTI GATC 9 cut(s) 111, 135, 359, 661, 705, 913, 947, 1080, 1155
BstMAI GTCTC 3 cut(s) 40, 1087, 1409
BstMBI GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
BstMCI CGRYCG 2 cut(s) 336, 438
BstMWI GCNNNNNNNGC 2 cut(s) 386, 877
BstNI CCWGG 4 cut(s) 179, 665, 680, 1280
BstNSI RCATGY 1 cut(s) 1223
BstSCI CCNGG 4 cut(s) 177, 663, 678, 1278
BstSLI GKGCMC 1 cut(s) 810
BstSNI TACGTA 1 cut(s) 547
BstUI CGCG 2 cut(s) 61, 719
BstV1I GCAGC 2 cut(s) 589, 1218
BstV2I GAAGAC 3 cut(s) 645, 1067, 1257
BstX2I RGATCY 3 cut(s) 356, 944, 1152
BstXI CCANNNNNNTGG 2 cut(s) 376, 686
BstYI RGATCY 3 cut(s) 356, 944, 1152
BstZI CGGCCG 1 cut(s) 333
Bsu36I CCTNAGG 1 cut(s) 873
BsuI GTATCC 2 cut(s) 688, 992
BsuRI GGCC 3 cut(s) 335, 368, 380
BtgI CCRYGG 1 cut(s) 167
BtgZI GCGATG 1 cut(s) 6
BtrI CACGTC 1 cut(s) 198
BtsCI GGATG 5 cut(s) 207, 268, 541, 695, 1290
BtsI GCAGTG 1 cut(s) 1132
BtsIMutI CAGTG 2 cut(s) 357, 1132
BtuMI TCGCGA 1 cut(s) 61
Cac8I GCNNGC 3 cut(s) 806, 1191, 1206
CfoI GCGC 2 cut(s) 651, 1278
Cfr10I RCCGGY 3 cut(s) 433, 1204, 1475
Cfr13I GGNCC 1 cut(s) 553
CseI GACGC 3 cut(s) 171, 722, 1157
Csp6I GTAC 5 cut(s) 268, 499, 814, 1040, 1100
CspAI ACCGGT 2 cut(s) 433, 1475
CviAII CATG 6 cut(s) 289, 373, 707, 1012, 1220, 1307
CviQI GTAC 5 cut(s) 268, 499, 814, 1040, 1100
DdeI CTNAG 7 cut(s) 423, 873, 963, 1043, 1215, 1272, 1334
DpnI GATC 9 cut(s) 110, 134, 358, 660, 704, 912, 946, 1079, 1154
DpnII GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
EaeI YGGCCR 2 cut(s) 333, 378
EagI CGGCCG 1 cut(s) 333
Eam1104I CTCTTC 3 cut(s) 84, 782, 1397
EarI CTCTTC 3 cut(s) 84, 782, 1397
Ecl136II GAGCTC 2 cut(s) 880, 1312
EclXI CGGCCG 1 cut(s) 333
Eco105I TACGTA 1 cut(s) 547
Eco130I CCWWGG 3 cut(s) 83, 901, 1086
Eco24I GRGCYC 2 cut(s) 882, 1314
Eco47I GGWCC 1 cut(s) 553
Eco47III AGCGCT 1 cut(s) 650
Eco52I CGGCCG 1 cut(s) 333
Eco53kI GAGCTC 2 cut(s) 880, 1312
Eco81I CCTNAGG 1 cut(s) 873
Eco88I CYCGRG 3 cut(s) 557, 758, 1055
EcoICRI GAGCTC 2 cut(s) 880, 1312
EcoRII CCWGG 4 cut(s) 177, 663, 678, 1278
EcoT14I CCWWGG 3 cut(s) 83, 901, 1086
EcoT38I GRGCYC 2 cut(s) 882, 1314
ErhI CCWWGG 3 cut(s) 83, 901, 1086
Esp3I CGTCTC 1 cut(s) 1087
FaeI CATG 6 cut(s) 292, 376, 710, 1015, 1223, 1310
FatI CATG 6 cut(s) 288, 372, 706, 1011, 1219, 1306
FauI CCCGC 1 cut(s) 797
FblI GTMKAC 2 cut(s) 438, 711
Fnu4HI GCNGC 6 cut(s) 123, 333, 603, 717, 779, 1232
FokI GGATG 5 cut(s) 214, 275, 548, 702, 1277
FriOI GRGCYC 2 cut(s) 882, 1314
Fsp4HI GCNGC 6 cut(s) 123, 333, 603, 717, 779, 1232
GlaI GCGC 2 cut(s) 650, 1277
GluI GCNGC 6 cut(s) 123, 333, 603, 717, 779, 1232
GsaI CCCAGC 1 cut(s) 484
HaeII RGCGCY 2 cut(s) 652, 1279
HaeIII GGCC 3 cut(s) 335, 368, 380
HapII CCGG 7 cut(s) 209, 381, 434, 459, 831, 1205, 1476
HgaI GACGC 3 cut(s) 171, 722, 1157
HhaI GCGC 2 cut(s) 651, 1278
Hin1I GRCGYC 3 cut(s) 182, 642, 714
Hin1II CATG 6 cut(s) 292, 376, 710, 1015, 1223, 1310
Hin6I GCGC 2 cut(s) 649, 1276
HinP1I GCGC 2 cut(s) 649, 1276
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HinfI GANTC 3 cut(s) 323, 342, 1053
HpaII CCGG 7 cut(s) 209, 381, 434, 459, 831, 1205, 1476
HphI GGTGA 5 cut(s) 448, 535, 796, 916, 1216
Hpy166II GTNNAC 5 cut(s) 43, 286, 439, 712, 1386
Hpy188I TCNGA 9 cut(s) 31, 92, 132, 320, 328, 364, 702, 1159, 1247
Hpy188III TCNNGA 8 cut(s) 60, 112, 190, 394, 1025, 1057, 1075, 1294
Hpy8I GTNNAC 5 cut(s) 43, 286, 439, 712, 1386
Hpy99I CGWCG 5 cut(s) 146, 187, 199, 257, 1173
HpyAV CCTTC 6 cut(s) 61, 109, 511, 931, 1043, 1331
HpyCH4III ACNGT 4 cut(s) 352, 1228, 1346, 1390
HpyCH4IV ACGT 6 cut(s) 66, 197, 252, 546, 642, 798
HpyCH4V TGCA 3 cut(s) 311, 494, 1306
HpyF10VI GCNNNNNNNGC 2 cut(s) 386, 877
HpyF3I CTNAG 7 cut(s) 423, 873, 963, 1043, 1215, 1272, 1334
HpySE526I ACGT 6 cut(s) 66, 197, 252, 546, 642, 798
Hsp92I GRCGYC 3 cut(s) 182, 642, 714
Hsp92II CATG 6 cut(s) 292, 376, 710, 1015, 1223, 1310
HspAI GCGC 2 cut(s) 649, 1276
KroI GCCGGC 1 cut(s) 1204
KroNI GCCGGC 1 cut(s) 1206
Kzo9I GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
LguI GCTCTTC 1 cut(s) 782
LmnI GCTCC 6 cut(s) 205, 461, 742, 877, 905, 1343
Lsp1109I GCAGC 2 cut(s) 589, 1218
LweI GCATC 4 cut(s) 29, 141, 801, 1201
MaeII ACGT 6 cut(s) 66, 197, 252, 546, 642, 798
MaeIII GTNAC 4 cut(s) 190, 454, 1222, 1390
MalI GATC 9 cut(s) 110, 134, 358, 660, 704, 912, 946, 1079, 1154
MbiI CCGCTC 1 cut(s) 804
MboI GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
MflI RGATCY 3 cut(s) 356, 944, 1152
MhlI GDGCHC 4 cut(s) 9, 810, 882, 1314
MluCI AATT 5 cut(s) 488, 834, 931, 978, 1018
MlyI GAGTC 2 cut(s) 351, 1047
MmeI TCCRAC 2 cut(s) 319, 1365
MroNI GCCGGC 1 cut(s) 1204
MseI TTAA 1 cut(s) 624
MslI CAYNNNNRTG 1 cut(s) 797
MspA1I CMGCKG 1 cut(s) 781
MspI CCGG 7 cut(s) 209, 381, 434, 459, 831, 1205, 1476
MspR9I CCNGG 4 cut(s) 179, 665, 680, 1280
Mva1269I GAATGC 2 cut(s) 218, 389
MvaI CCWGG 4 cut(s) 179, 665, 680, 1280
MvnI CGCG 2 cut(s) 61, 719
MwoI GCNNNNNNNGC 2 cut(s) 386, 877
NaeI GCCGGC 1 cut(s) 1206
NdeII GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
NgoMIV GCCGGC 1 cut(s) 1204
NlaIII CATG 6 cut(s) 292, 376, 710, 1015, 1223, 1310
NlaIV GGNNCC 4 cut(s) 207, 555, 616, 946
NmuCI GTSAC 3 cut(s) 190, 454, 1222
NruI TCGCGA 1 cut(s) 61
NspI RCATGY 1 cut(s) 1223
NspV TTCGAA 2 cut(s) 70, 636
PaeR7I CTCGAG 2 cut(s) 758, 1055
PciSI GCTCTTC 1 cut(s) 782
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PctI GAATGC 2 cut(s) 218, 389
PdiI GCCGGC 1 cut(s) 1206
PfeI GAWTC 1 cut(s) 323
PinAI ACCGGT 2 cut(s) 433, 1475
PkrI GCNGC 6 cut(s) 124, 334, 604, 718, 780, 1233
PleI GAGTC 2 cut(s) 350, 1047
PpsI GAGTC 2 cut(s) 350, 1047
Ppu21I YACGTR 1 cut(s) 547
Psp124BI GAGCTC 2 cut(s) 882, 1314
Psp6I CCWGG 4 cut(s) 177, 663, 678, 1278
PspFI CCCAGC 1 cut(s) 480
PspGI CCWGG 4 cut(s) 177, 663, 678, 1278
PspN4I GGNNCC 4 cut(s) 207, 555, 616, 946
PspPI GGNCC 1 cut(s) 553
PspXI VCTCGAGB 1 cut(s) 758
PsuI RGATCY 3 cut(s) 356, 944, 1152
RruI TCGCGA 1 cut(s) 61
RsaI GTAC 5 cut(s) 269, 500, 815, 1041, 1101
RsaNI GTAC 5 cut(s) 268, 499, 814, 1040, 1100
RseI CAYNNNNRTG 1 cut(s) 797
SacI GAGCTC 2 cut(s) 882, 1314
SalI GTCGAC 1 cut(s) 437
SapI GCTCTTC 1 cut(s) 782
SaqAI TTAA 1 cut(s) 624
SatI GCNGC 6 cut(s) 123, 333, 603, 717, 779, 1232
Sau3AI GATC 9 cut(s) 108, 132, 356, 658, 702, 910, 944, 1077, 1152
Sau96I GGNCC 1 cut(s) 553
SchI GAGTC 2 cut(s) 351, 1047
ScrFI CCNGG 4 cut(s) 179, 665, 680, 1280
SduI GDGCHC 4 cut(s) 9, 810, 882, 1314
SfaNI GCATC 4 cut(s) 29, 141, 801, 1201
Sfr274I CTCGAG 2 cut(s) 758, 1055
SfuI TTCGAA 2 cut(s) 70, 636
SinI GGWCC 1 cut(s) 553
SlaI CTCGAG 2 cut(s) 758, 1055
SmiMI CAYNNNNRTG 1 cut(s) 797
SmlI CTYRAG 2 cut(s) 758, 1055
SmoI CTYRAG 2 cut(s) 758, 1055
SnaBI TACGTA 1 cut(s) 547
Sse9I AATT 5 cut(s) 488, 834, 931, 978, 1018
SsiI CCGC 6 cut(s) 18, 122, 332, 717, 779, 804
SstI GAGCTC 2 cut(s) 882, 1314
StyD4I CCNGG 4 cut(s) 177, 663, 678, 1278
StyI CCWWGG 3 cut(s) 83, 901, 1086
TaaI ACNGT 4 cut(s) 352, 1228, 1346, 1390
TaiI ACGT 6 cut(s) 69, 200, 255, 549, 645, 801
TaqI TCGA 8 cut(s) 70, 107, 255, 438, 636, 759, 1056, 1314
TasI AATT 5 cut(s) 488, 834, 931, 978, 1018
TatI WGTACW 1 cut(s) 1039
TauI GCSGC 4 cut(s) 125, 335, 719, 781
TfiI GAWTC 1 cut(s) 323
Tru1I TTAA 1 cut(s) 624
Tru9I TTAA 1 cut(s) 624
TscAI CASTG 2 cut(s) 357, 1139
TseFI GTSAC 3 cut(s) 190, 454, 1222
TseI GCWGC 2 cut(s) 602, 1231
Tsp45I GTSAC 3 cut(s) 190, 454, 1222
TspDTI ATGAA 1 cut(s) 721
TspGWI ACGGA 4 cut(s) 174, 729, 761, 831
TspRI CASTG 2 cut(s) 357, 1139
VpaK11BI GGWCC 1 cut(s) 553
XapI RAATTY 1 cut(s) 488
XceI RCATGY 1 cut(s) 1223
XcmI CCANNNNNNNNNTGG 1 cut(s) 759
XhoI CTCGAG 2 cut(s) 758, 1055
XmiI GTMKAC 2 cut(s) 438, 711
ZraI GACGTC 1 cut(s) 643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.