Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0005605

Physical Location & Seq

Genomic Coordinates Reverse (-)

14248413 .. 14253585

Gene Structure 5173 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022894

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGCAATGTGACTCTTTCCTTATTTTATGCATATATATAGATCGATCAAAGAAACCGATCAGTATGGTGCTCTCCAAAACCGCATCGGAGTCAGATGTCTCTGTCCACTCCACCTTCGCTTCGCGATACGTTCGAACTTCTCTTCCAAGGTTCAGAATGGGGGAGAACTCGATCCCGAAGGAGGCGGCTTATCAGATCATAAACGACGAGCTGATGCTGGACGGAAATCCACGGCTGAACCTGGCGTCGTTCGTGACGACGTGGATGGAGCCGGAATGCGATAAACTCATTATGTCCTCCATCAACAAGAACTACGTCGATATGGATGAGTACCCTGTCACCACTGAGCTCCAGAATCGGTGCGTGAACATGATAGCTCATCTATTCAATGCACCACTCGGAGAATCAGAGGCGGCCGTTGGAGTCGGCACAGTGGGATCTTCCGAGGCCATCATGTTGGCTGGATTGGCATTCAAGAGGAGGTGGCAGAACAAGAGGAGAGCTGAGGGAAAACCGGTCGACAAACCCAACATTGTCACCGGAGCCAATGTTCAGGTGTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAGGAGGTGAAGTTGAGGGATGATTACTACGTAATGGACCCCGAGAAAGCTGTGGAGATGGTTGATGAGAACACCATCTGCGTTGCTGCTATCCTCGGTTCCACTCTCAATGGCGAGTTCGAAGACGTCAAGCGCTTGAATGATCTCCTGGTTGAGAAAAACCAGGAAACTGGATGGGATACTCCGATCCATGTAGACGCCGCGAGTGGTGGGTTCATTGCTCCGTTTTTATACCCAGAACTCGAGTGGGATTTCCGTTTGCCGCTGGTGAAGAGCATCAATGTGAGCGGGCACAAGTACGGACTTGTGTATGCCGGAATTGGGTGGGTCATTTGGAGGAACAAAGAGGACTTGCCTGAGGAGCTCATCTTCCATATCAACTACCTTGGAGCAGATCAACCTACCTTCACCCTCAATTTCTCTAAAGGATCCAGCCAAGTTATTGCTCAGTATTACCAACTAATTCGCTTGGGTTTTGAGGGATACAGGAACATCATGGAAAATTGTCGTGAAAATATGATTGTACTAAGAGAAGGACTCGAGAAGACAGGTCGCTTCAAGATCGTCTCCAAGGACGAGGGAGTACCCCTGGTCGCTTTTTCTCTCAAAGATAACCATTGCCACGATGAGTTTGAGATCTCTGATTTGTTGCGTCGCTACGGGTGGATTGTGCCAGCATACACTATGCCGGCAGATGCTCAGCATGTCACCGTGCTGCGTGTGGTCATCAGAGAAGACTTTTCTCACACTCTTGCTGAGCGCCTGGTCAATGACATCCAGAAAGTTCTGCATGAGCTCGACCACCTTCCATCAAAGCTCAGCTCCAACAGTTCCATTGAAAGCCAATCGGTTGAGAACAATGAGAAGTCCACTGTTACCACGAAGAAGAGTGCTTTGGAGACACAGAGGGAAATCACTACCATTTGGAGGAAGTTTGTTATGGAGAAGAAGAAGATAACCGGTGTTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004351 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006536 GO:0006807 GO:0008150 GO:0008152 GO:0009064 GO:0009987 GO:0010035 GO:0010038 GO:0016829 GO:0016830 GO:0016831 GO:0019752 GO:0042221 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0071704 GO:1901564 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00250 ko00410 ko00430 ko00650 ko01100 ko01110 ko01120 ko02024 ko04727 ko04940 map00250 map00410 map00430 map00650 map01100 map01110 map01120 map02024 map04727 map04940

Pfam Domains

Protein Families

Pyridoxal_deC

Protein Analysis

523

Amino Acids

59.47

Weight (kDa)

5.56

Isoelectric Point (pI)

35.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyridoxal_deC	PF00282	59 - 402	8.5e-106	Pyridoxal-dependent decarboxylase conserved domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005605)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65960 AT1G65960 AT1G65960 AT1G65960 AT2G02000 AT2G02010 AT2G02010 AT5G17330
fragaria_vesca	FvH4_1g30330 FvH4_1g30330
malus_domestica	MD09G1276300.v1.1 MD09G1277000.v1.1
prunus_persica	Prupe.3G015900_v2.0.a1 Prupe.3G015900_v2.0.a1 Prupe.3G015900_v2.0.a1 Prupe.3G016000_v2.0.a1
pyrus_communis	pycom09g18640 pycom09g18660
rosa_chinensis	RchiOBHm_Chr3g0490221
rosa_laevigata	RLG00000022894
rosa_multiflora	Rmu_sc0041217.1_g000001
rosa_roxburghii	Rroxscaffold_6G00393680
rosa_rugosa	Rorug03G0243200
rosa_samantha	Rh3AG291500 Rh3BG328700 Rh3CG325500 Rh3DG324800
rosa_wichuraiana	Rw3G025800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	726
AccBSI	CCGCTC	1 cut(s)	885
AccI	GTMKAC	2 cut(s)	519, 792
AccII	CGCG	2 cut(s)	124, 800
AciI	CCGC	6 cut(s)	81, 185, 413, 798, 860, 885
AclWI	GGATC	5 cut(s)	166, 445, 778, 1020, 1033
AcoI	YGGCCR	1 cut(s)	414
AcsI	RAATTY	1 cut(s)	569
AcyI	GRCGYC	3 cut(s)	245, 723, 795
AfaI	GTAC	5 cut(s)	332, 581, 896, 1122, 1182
AfeI	AGCGCT	1 cut(s)	731
AfiI	CCNNNNNNNGG	3 cut(s)	181, 918, 1524
AgeI	ACCGGT	2 cut(s)	514, 1556
AgsI	TTSAA	6 cut(s)	388, 475, 598, 736, 1156, 1436
AjiI	CACGTC	1 cut(s)	261
AjnI	CCWGG	5 cut(s)	240, 744, 759, 1185, 1359
AjuI	GAANNNNNNNTTGG	2 cut(s)	1475, 1507
AloI	GAACNNNNNNTCC	4 cut(s)	127, 159, 534, 566
AluBI	AGCT	9 cut(s)	211, 349, 377, 503, 647, 961, 1393, 1414, 1419
AluI	AGCT	9 cut(s)	211, 349, 377, 503, 647, 961, 1393, 1414, 1419
Alw21I	GWGCWC	4 cut(s)	72, 351, 963, 1395
Alw26I	GTCTC	3 cut(s)	103, 1168, 1490
AlwI	GGATC	5 cut(s)	166, 445, 778, 1020, 1033
Ama87I	CYCGRG	3 cut(s)	638, 839, 1136
Aor51HI	AGCGCT	1 cut(s)	731
AoxI	GGCC	2 cut(s)	414, 447
ApeKI	GCWGC	2 cut(s)	683, 1312
ApoI	RAATTY	1 cut(s)	569
AsiGI	ACCGGT	2 cut(s)	514, 1556
AspLEI	GCGC	2 cut(s)	732, 1359
AspS9I	GGNCC	1 cut(s)	634
AsuHPI	GGTGA	6 cut(s)	331, 529, 616, 877, 997, 1297
AsuII	TTCGAA	2 cut(s)	133, 717
AvaI	CYCGRG	3 cut(s)	638, 839, 1136
AvaII	GGWCC	1 cut(s)	634
AxyI	CCTNAGG	1 cut(s)	954
BaeGI	GKGCMC	1 cut(s)	891
BamHI	GGATCC	1 cut(s)	1025
BanII	GRGCYC	3 cut(s)	351, 963, 1395
BbsI	GAAGAC	3 cut(s)	726, 1148, 1338
Bbv12I	GWGCWC	4 cut(s)	72, 351, 963, 1395
BbvCI	CCTCAGC	1 cut(s)	504
BbvI	GCAGC	2 cut(s)	670, 1299
BccI	CCATC	7 cut(s)	259, 308, 458, 649, 680, 765, 1414
BceAI	ACGGC	2 cut(s)	248, 401
BciT130I	CCWGG	5 cut(s)	242, 746, 761, 1187, 1361
BciVI	GTATCC	2 cut(s)	769, 1073
BcoDI	GTCTC	3 cut(s)	103, 1168, 1490
BfoI	RGCGCY	2 cut(s)	733, 1360
BfuI	GTATCC	2 cut(s)	769, 1073
BglII	AGATCT	1 cut(s)	1233
BisI	GCNGC	6 cut(s)	186, 414, 684, 798, 860, 1313
BlpI	GCTNAGC	3 cut(s)	1296, 1353, 1415
BlsI	GCNGC	6 cut(s)	187, 415, 685, 799, 861, 1314
Bme1390I	CCNGG	5 cut(s)	242, 746, 761, 1187, 1361
Bme18I	GGWCC	1 cut(s)	634
BmeT110I	CYCGRG	3 cut(s)	638, 839, 1136
BmgBI	CACGTC	1 cut(s)	261
BmgT120I	GGNCC	1 cut(s)	634
BmiI	GGNNCC	5 cut(s)	270, 544, 636, 697, 1027
BmrFI	CCNGG	5 cut(s)	242, 746, 761, 1187, 1361
BmsI	GCATC	4 cut(s)	92, 204, 882, 1282
BpiI	GAAGAC	3 cut(s)	726, 1148, 1338
BplI	GAGNNNNNCTC	2 cut(s)	1119, 1151
BpmI	CTGGAG	1 cut(s)	335
Bpu10I	CCTNAGC	1 cut(s)	504
Bpu1102I	GCTNAGC	3 cut(s)	1296, 1353, 1415
Bpu14I	TTCGAA	2 cut(s)	133, 717
Bsa29I	ATCGAT	1 cut(s)	43
BsaAI	YACGTR	1 cut(s)	628
BsaHI	GRCGYC	3 cut(s)	245, 723, 795
BsaJI	CCNNGG	7 cut(s)	146, 230, 444, 691, 982, 1167, 1185
BsaWI	WCCGGW	3 cut(s)	514, 539, 1556
BsaXI	ACNNNNNCTCC	4 cut(s)	534, 564, 593, 623
Bsc4I	CCNNNNNNNGG	3 cut(s)	181, 918, 1524
Bse118I	RCCGGY	3 cut(s)	514, 1285, 1556
Bse1I	ACTGG	1 cut(s)	772
Bse21I	CCTNAGG	1 cut(s)	954
Bse3DI	GCAATG	3 cut(s)	11, 813, 1213
BseBI	CCWGG	5 cut(s)	242, 746, 761, 1187, 1361
BseCI	ATCGAT	1 cut(s)	43
BseDI	CCNNGG	7 cut(s)	146, 230, 444, 691, 982, 1167, 1185
BseGI	GGATG	5 cut(s)	270, 331, 622, 776, 1371
BseLI	CCNNNNNNNGG	3 cut(s)	181, 918, 1524
BseMI	GCAATG	3 cut(s)	11, 813, 1213
BseMII	CTCAG	7 cut(s)	336, 495, 945, 1058, 1310, 1344, 1429
BseNI	ACTGG	1 cut(s)	772
BseRI	GAGGAG	3 cut(s)	493, 511, 971
BseSI	GKGCMC	1 cut(s)	891
BseX3I	CGGCCG	1 cut(s)	414
BseXI	GCAGC	2 cut(s)	670, 1299
BseYI	CCCAGC	1 cut(s)	561
Bsh1236I	CGCG	2 cut(s)	124, 800
Bsh1285I	CGRYCG	2 cut(s)	417, 519
BshFI	GGCC	2 cut(s)	416, 449
BshTI	ACCGGT	2 cut(s)	514, 1556
BshVI	ATCGAT	1 cut(s)	43
BsiEI	CGRYCG	2 cut(s)	417, 519
BsiHKAI	GWGCWC	4 cut(s)	72, 351, 963, 1395
BsiHKCI	CYCGRG	3 cut(s)	638, 839, 1136
BsiSI	CCGG	6 cut(s)	272, 515, 540, 912, 1286, 1557
BslI	CCNNNNNNNGG	3 cut(s)	181, 918, 1524
BsmAI	GTCTC	3 cut(s)	103, 1168, 1490
BsmBI	CGTCTC	1 cut(s)	1168
BsmI	GAATGC	2 cut(s)	281, 470
BsnI	GGCC	2 cut(s)	416, 449
BsoBI	CYCGRG	3 cut(s)	638, 839, 1136
Bsp119I	TTCGAA	2 cut(s)	133, 717
Bsp1286I	GDGCHC	5 cut(s)	72, 351, 891, 963, 1395
Bsp1720I	GCTNAGC	3 cut(s)	1296, 1353, 1415
Bsp68I	TCGCGA	1 cut(s)	124
BspACI	CCGC	6 cut(s)	81, 185, 413, 798, 860, 885
BspANI	GGCC	2 cut(s)	416, 449
BspCNI	CTCAG	7 cut(s)	337, 496, 946, 1057, 1309, 1345, 1428
BspDI	ATCGAT	1 cut(s)	43
BspFNI	CGCG	2 cut(s)	124, 800
BspLI	GGNNCC	5 cut(s)	270, 544, 636, 697, 1027
BspPI	GGATC	5 cut(s)	166, 445, 778, 1020, 1033
BspQI	GCTCTTC	1 cut(s)	863
BspT104I	TTCGAA	2 cut(s)	133, 717
BsrBI	CCGCTC	1 cut(s)	885
BsrDI	GCAATG	3 cut(s)	11, 813, 1213
BsrFI	RCCGGY	3 cut(s)	514, 1285, 1556
BsrI	ACTGG	1 cut(s)	772
BssAI	RCCGGY	3 cut(s)	514, 1285, 1556
BssECI	CCNNGG	7 cut(s)	146, 230, 444, 691, 982, 1167, 1185
BssNI	GRCGYC	3 cut(s)	245, 723, 795
BssT1I	CCWWGG	3 cut(s)	146, 982, 1167
Bst2UI	CCWGG	5 cut(s)	242, 746, 761, 1187, 1361
Bst4CI	ACNGT	4 cut(s)	433, 1309, 1427, 1471
Bst6I	CTCTTC	3 cut(s)	147, 863, 1478
BstACI	GRCGYC	3 cut(s)	245, 723, 795
BstBAI	YACGTR	1 cut(s)	628
BstBI	TTCGAA	2 cut(s)	133, 717
BstC8I	GCNNGC	3 cut(s)	887, 1272, 1287
BstDEI	CTNAG	8 cut(s)	345, 504, 954, 1044, 1124, 1296, 1353, 1415
BstDSI	CCRYGG	1 cut(s)	230
BstF5I	GGATG	5 cut(s)	270, 331, 622, 776, 1371
BstFNI	CGCG	2 cut(s)	124, 800
BstH2I	RGCGCY	2 cut(s)	733, 1360
BstHHI	GCGC	2 cut(s)	732, 1359
BstMAI	GTCTC	3 cut(s)	103, 1168, 1490
BstMCI	CGRYCG	2 cut(s)	417, 519
BstMWI	GCNNNNNNNGC	2 cut(s)	467, 958
BstNI	CCWGG	5 cut(s)	242, 746, 761, 1187, 1361
BstNSI	RCATGY	1 cut(s)	1304
BstSCI	CCNGG	5 cut(s)	240, 744, 759, 1185, 1359
BstSLI	GKGCMC	1 cut(s)	891
BstSNI	TACGTA	1 cut(s)	628
BstUI	CGCG	2 cut(s)	124, 800
BstV1I	GCAGC	2 cut(s)	670, 1299
BstV2I	GAAGAC	3 cut(s)	726, 1148, 1338
BstX2I	RGATCY	3 cut(s)	437, 1025, 1233
BstXI	CCANNNNNNTGG	2 cut(s)	457, 767
BstYI	RGATCY	3 cut(s)	437, 1025, 1233
BstZI	CGGCCG	1 cut(s)	414
Bsu15I	ATCGAT	1 cut(s)	43
Bsu36I	CCTNAGG	1 cut(s)	954
BsuI	GTATCC	2 cut(s)	769, 1073
BsuRI	GGCC	2 cut(s)	416, 449
BsuTUI	ATCGAT	1 cut(s)	43
BtgI	CCRYGG	1 cut(s)	230
BtrI	CACGTC	1 cut(s)	261
BtsCI	GGATG	5 cut(s)	270, 331, 622, 776, 1371
BtsIMutI	CAGTG	3 cut(s)	342, 438, 1467
BtuMI	TCGCGA	1 cut(s)	124
Cac8I	GCNNGC	3 cut(s)	887, 1272, 1287
CfoI	GCGC	2 cut(s)	732, 1359
Cfr10I	RCCGGY	3 cut(s)	514, 1285, 1556
Cfr13I	GGNCC	1 cut(s)	634
ClaI	ATCGAT	1 cut(s)	43
CseI	GACGC	3 cut(s)	234, 803, 1238
Csp6I	GTAC	5 cut(s)	331, 580, 895, 1121, 1181
CspAI	ACCGGT	2 cut(s)	514, 1556
CviAII	CATG	6 cut(s)	370, 454, 788, 1093, 1301, 1388
CviQI	GTAC	5 cut(s)	331, 580, 895, 1121, 1181
DdeI	CTNAG	8 cut(s)	345, 504, 954, 1044, 1124, 1296, 1353, 1415
EaeI	YGGCCR	1 cut(s)	414
EagI	CGGCCG	1 cut(s)	414
Eam1104I	CTCTTC	3 cut(s)	147, 863, 1478
EarI	CTCTTC	3 cut(s)	147, 863, 1478
Ecl136II	GAGCTC	3 cut(s)	349, 961, 1393
EclXI	CGGCCG	1 cut(s)	414
Eco105I	TACGTA	1 cut(s)	628
Eco130I	CCWWGG	3 cut(s)	146, 982, 1167
Eco24I	GRGCYC	3 cut(s)	351, 963, 1395
Eco47I	GGWCC	1 cut(s)	634
Eco47III	AGCGCT	1 cut(s)	731
Eco52I	CGGCCG	1 cut(s)	414
Eco53kI	GAGCTC	3 cut(s)	349, 961, 1393
Eco81I	CCTNAGG	1 cut(s)	954
Eco88I	CYCGRG	3 cut(s)	638, 839, 1136
EcoICRI	GAGCTC	3 cut(s)	349, 961, 1393
EcoRII	CCWGG	5 cut(s)	240, 744, 759, 1185, 1359
EcoT14I	CCWWGG	3 cut(s)	146, 982, 1167
EcoT22I	ATGCAT	1 cut(s)	32
EcoT38I	GRGCYC	3 cut(s)	351, 963, 1395
ErhI	CCWWGG	3 cut(s)	146, 982, 1167
Esp3I	CGTCTC	1 cut(s)	1168
FaeI	CATG	6 cut(s)	373, 457, 791, 1096, 1304, 1391
FatI	CATG	6 cut(s)	369, 453, 787, 1092, 1300, 1387
FauI	CCCGC	1 cut(s)	878
FblI	GTMKAC	2 cut(s)	519, 792
Fnu4HI	GCNGC	6 cut(s)	186, 414, 684, 798, 860, 1313
FokI	GGATG	5 cut(s)	277, 338, 629, 783, 1358
FriOI	GRGCYC	3 cut(s)	351, 963, 1395
Fsp4HI	GCNGC	6 cut(s)	186, 414, 684, 798, 860, 1313
GlaI	GCGC	2 cut(s)	731, 1358
GluI	GCNGC	6 cut(s)	186, 414, 684, 798, 860, 1313
GsaI	CCCAGC	1 cut(s)	565
GsuI	CTGGAG	1 cut(s)	335
HaeII	RGCGCY	2 cut(s)	733, 1360
HaeIII	GGCC	2 cut(s)	416, 449
HapII	CCGG	6 cut(s)	272, 515, 540, 912, 1286, 1557
HgaI	GACGC	3 cut(s)	234, 803, 1238
HhaI	GCGC	2 cut(s)	732, 1359
Hin1I	GRCGYC	3 cut(s)	245, 723, 795
Hin1II	CATG	6 cut(s)	373, 457, 791, 1096, 1304, 1391
Hin6I	GCGC	2 cut(s)	730, 1357
HinP1I	GCGC	2 cut(s)	730, 1357
HincII	GTYRAC	1 cut(s)	520
HindII	GTYRAC	1 cut(s)	520
HinfI	GANTC	6 cut(s)	11, 89, 355, 404, 423, 1134
HpaII	CCGG	6 cut(s)	272, 515, 540, 912, 1286, 1557
HphI	GGTGA	6 cut(s)	331, 529, 616, 877, 997, 1297
Hpy166II	GTNNAC	5 cut(s)	106, 367, 520, 793, 1467
Hpy188III	TCNNGA	9 cut(s)	123, 175, 253, 352, 475, 1106, 1138, 1156, 1375
Hpy8I	GTNNAC	5 cut(s)	106, 367, 520, 793, 1467
Hpy99I	CGWCG	5 cut(s)	209, 250, 262, 320, 1254
HpyAV	CCTTC	6 cut(s)	124, 172, 592, 1012, 1124, 1412
HpyCH4III	ACNGT	4 cut(s)	433, 1309, 1427, 1471
HpyCH4IV	ACGT	5 cut(s)	129, 260, 315, 627, 723
HpyCH4V	TGCA	5 cut(s)	4, 30, 392, 575, 1387
HpyF10VI	GCNNNNNNNGC	2 cut(s)	467, 958
HpyF3I	CTNAG	8 cut(s)	345, 504, 954, 1044, 1124, 1296, 1353, 1415
HpySE526I	ACGT	5 cut(s)	129, 260, 315, 627, 723
Hsp92I	GRCGYC	3 cut(s)	245, 723, 795
Hsp92II	CATG	6 cut(s)	373, 457, 791, 1096, 1304, 1391
HspAI	GCGC	2 cut(s)	730, 1357
KroI	GCCGGC	1 cut(s)	1285
KroNI	GCCGGC	1 cut(s)	1287
LguI	GCTCTTC	1 cut(s)	863
LmnI	GCTCC	7 cut(s)	268, 354, 542, 823, 958, 986, 1424
Lsp1109I	GCAGC	2 cut(s)	670, 1299
LweI	GCATC	4 cut(s)	92, 204, 882, 1282
MaeII	ACGT	5 cut(s)	129, 260, 315, 627, 723
MaeIII	GTNAC	6 cut(s)	8, 253, 337, 535, 1303, 1471
MbiI	CCGCTC	1 cut(s)	885
MflI	RGATCY	3 cut(s)	437, 1025, 1233
MhlI	GDGCHC	5 cut(s)	72, 351, 891, 963, 1395
MluCI	AATT	5 cut(s)	569, 915, 1012, 1059, 1099
MlyI	GAGTC	4 cut(s)	5, 98, 432, 1128
MmeI	TCCRAC	2 cut(s)	400, 1446
Mph1103I	ATGCAT	1 cut(s)	32
MroNI	GCCGGC	1 cut(s)	1285
MslI	CAYNNNNRTG	1 cut(s)	878
MspA1I	CMGCKG	1 cut(s)	862
MspI	CCGG	6 cut(s)	272, 515, 540, 912, 1286, 1557
MspR9I	CCNGG	5 cut(s)	242, 746, 761, 1187, 1361
Mva1269I	GAATGC	2 cut(s)	281, 470
MvaI	CCWGG	5 cut(s)	242, 746, 761, 1187, 1361
MvnI	CGCG	2 cut(s)	124, 800
MwoI	GCNNNNNNNGC	2 cut(s)	467, 958
NaeI	GCCGGC	1 cut(s)	1287
NgoMIV	GCCGGC	1 cut(s)	1285
NlaIII	CATG	6 cut(s)	373, 457, 791, 1096, 1304, 1391
NlaIV	GGNNCC	5 cut(s)	270, 544, 636, 697, 1027
NmuCI	GTSAC	5 cut(s)	8, 253, 337, 535, 1303
NruI	TCGCGA	1 cut(s)	124
NsiI	ATGCAT	1 cut(s)	32
NspI	RCATGY	1 cut(s)	1304
NspV	TTCGAA	2 cut(s)	133, 717
PaeR7I	CTCGAG	2 cut(s)	839, 1136
PciSI	GCTCTTC	1 cut(s)	863
PcsI	WCGNNNNNNNCGW	1 cut(s)	254
PctI	GAATGC	2 cut(s)	281, 470
PdiI	GCCGGC	1 cut(s)	1287
PfeI	GAWTC	2 cut(s)	355, 404
PinAI	ACCGGT	2 cut(s)	514, 1556
PkrI	GCNGC	6 cut(s)	187, 415, 685, 799, 861, 1314
PleI	GAGTC	4 cut(s)	5, 97, 431, 1128
PpsI	GAGTC	4 cut(s)	5, 97, 431, 1128
Ppu21I	YACGTR	1 cut(s)	628
Psp124BI	GAGCTC	3 cut(s)	351, 963, 1395
Psp6I	CCWGG	5 cut(s)	240, 744, 759, 1185, 1359
PspFI	CCCAGC	1 cut(s)	561
PspGI	CCWGG	5 cut(s)	240, 744, 759, 1185, 1359
PspN4I	GGNNCC	5 cut(s)	270, 544, 636, 697, 1027
PspPI	GGNCC	1 cut(s)	634
PspXI	VCTCGAGB	1 cut(s)	839
PsuI	RGATCY	3 cut(s)	437, 1025, 1233
RruI	TCGCGA	1 cut(s)	124
RsaI	GTAC	5 cut(s)	332, 581, 896, 1122, 1182
RsaNI	GTAC	5 cut(s)	331, 580, 895, 1121, 1181
RseI	CAYNNNNRTG	1 cut(s)	878
SacI	GAGCTC	3 cut(s)	351, 963, 1395
SalI	GTCGAC	1 cut(s)	518
SapI	GCTCTTC	1 cut(s)	863
SatI	GCNGC	6 cut(s)	186, 414, 684, 798, 860, 1313
Sau96I	GGNCC	1 cut(s)	634
SchI	GAGTC	4 cut(s)	5, 98, 432, 1128
ScrFI	CCNGG	5 cut(s)	242, 746, 761, 1187, 1361
SduI	GDGCHC	5 cut(s)	72, 351, 891, 963, 1395
SfaNI	GCATC	4 cut(s)	92, 204, 882, 1282
Sfr274I	CTCGAG	2 cut(s)	839, 1136
SfuI	TTCGAA	2 cut(s)	133, 717
SinI	GGWCC	1 cut(s)	634
SlaI	CTCGAG	2 cut(s)	839, 1136
SmiMI	CAYNNNNRTG	1 cut(s)	878
SmlI	CTYRAG	2 cut(s)	839, 1136
SmoI	CTYRAG	2 cut(s)	839, 1136
SnaBI	TACGTA	1 cut(s)	628
Sse9I	AATT	5 cut(s)	569, 915, 1012, 1059, 1099
SsiI	CCGC	6 cut(s)	81, 185, 413, 798, 860, 885
SstI	GAGCTC	3 cut(s)	351, 963, 1395
StyD4I	CCNGG	5 cut(s)	240, 744, 759, 1185, 1359
StyI	CCWWGG	3 cut(s)	146, 982, 1167
TaaI	ACNGT	4 cut(s)	433, 1309, 1427, 1471
TaiI	ACGT	5 cut(s)	132, 263, 318, 630, 726
TaqI	TCGA	9 cut(s)	43, 133, 170, 318, 519, 717, 840, 1137, 1395
TasI	AATT	5 cut(s)	569, 915, 1012, 1059, 1099
TatI	WGTACW	1 cut(s)	1120
TauI	GCSGC	4 cut(s)	188, 416, 800, 862
TfiI	GAWTC	2 cut(s)	355, 404
TscAI	CASTG	3 cut(s)	349, 438, 1474
TseFI	GTSAC	5 cut(s)	8, 253, 337, 535, 1303
TseI	GCWGC	2 cut(s)	683, 1312
Tsp45I	GTSAC	5 cut(s)	8, 253, 337, 535, 1303
TspDTI	ATGAA	1 cut(s)	802
TspGWI	ACGGA	4 cut(s)	237, 810, 842, 912
TspRI	CASTG	3 cut(s)	349, 438, 1474
VpaK11BI	GGWCC	1 cut(s)	634
XapI	RAATTY	1 cut(s)	569
XceI	RCATGY	1 cut(s)	1304
XcmI	CCANNNNNNNNNTGG	1 cut(s)	840
XhoI	CTCGAG	2 cut(s)	839, 1136
XmiI	GTMKAC	2 cut(s)	519, 792
ZraI	GACGTC	1 cut(s)	724
Zsp2I	ATGCAT	1 cut(s)	32

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.